sinapse-ai 1.17.0 → 1.19.0

package/.sinapse-ai/data/entity-registry.yaml

@@ -1,7 +1,7 @@
 metadata:
   version: 1.0.0
-  lastUpdated: '2026-06-25T14:57:04.344Z'
-  entityCount: 796
+  lastUpdated: '2026-06-29T01:56:43.091Z'
+  entityCount: 803
   checksumAlgorithm: sha256
   resolutionRate: 100
 entities:
@@ -163,8 +163,8 @@ entities:
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         constraints: []
         extensionPoints: []
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-      lastVerified: '2026-06-24T05:00:49.158Z'
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+      lastVerified: '2026-06-28T23:34:42.268Z'
     local:
       path: bin/commands/local.js
       layer: L1
@@ -186,8 +186,8 @@ entities:
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-      lastVerified: '2026-06-15T01:36:42.598Z'
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+      lastVerified: '2026-06-28T23:34:42.268Z'
     status:
       path: bin/commands/status.js
       layer: L1
@@ -651,18 +651,21 @@ entities:
         - cli
         - component-generator
         - route-command
+        - build-command
+        - render-research-card
       externalDeps: []
       plannedDeps:
         - logger
         - permissions
         - orchestration
+        - atlas
       lifecycle: experimental
       adaptability:
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         constraints: []
         extensionPoints: []
-      checksum: sha256:5ee1c859ceedbbaa2cea1463677462985f1ce9472963d4b51589bdbfc5302395
-      lastVerified: '2026-06-25T14:57:04.173Z'
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+      lastVerified: '2026-06-27T21:56:17.123Z'
     collab-start:
       path: bin/utils/collab-start.js
       layer: L1
@@ -8699,6 +8702,154 @@ entities:
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       lastVerified: '2026-06-15T00:26:26.350Z'
   modules:
+    atlas-data:
+      path: .sinapse-ai/core/atlas/atlas-data.js
+      layer: L1
+      type: module
+      purpose: ''''', type: '''', source, file: relFromRoot(file) };'
+      keywords:
+        - atlas
+        - data
+      usedBy:
+        - index
+      dependencies:
+        - flows
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
+      adaptability:
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+      lastVerified: '2026-06-27T21:56:17.283Z'
+    flows-pt:
+      path: .sinapse-ai/core/atlas/flows-pt.js
+      layer: L1
+      type: module
+      purpose: Entity at .sinapse-ai\core\atlas\flows-pt.js
+      keywords:
+        - flows
+        - pt
+      usedBy:
+        - render-research-card
+      dependencies: []
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
+      adaptability:
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+      lastVerified: '2026-06-27T21:56:17.284Z'
+    flows:
+      path: .sinapse-ai/core/atlas/flows.js
+      layer: L1
+      type: module
+      purpose: string,mermaid:string}>} */
+      keywords:
+        - flows
+      usedBy:
+        - atlas-data
+      dependencies: []
+      externalDeps: []
+      plannedDeps: []
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+      lastVerified: '2026-06-27T21:56:17.284Z'
+    index:
+      path: .sinapse-ai/core/atlas/index.js
+      layer: L1
+      type: module
+      purpose: Entity at .sinapse-ai\core\atlas\index.js
+      keywords:
+        - index
+      usedBy: []
+      dependencies:
+        - atlas-data
+        - render-markdown
+        - render-html
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: experimental
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+      lastVerified: '2026-06-27T21:56:17.284Z'
+    render-html:
+      path: .sinapse-ai/core/atlas/render-html.js
+      layer: L1
+      type: module
+      purpose: Entity at .sinapse-ai\core\atlas\render-html.js
+      keywords:
+        - render
+        - html
+      usedBy:
+        - index
+      dependencies: []
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
+      adaptability:
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+        constraints: []
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+      lastVerified: '2026-06-27T21:56:17.284Z'
+    render-markdown:
+      path: .sinapse-ai/core/atlas/render-markdown.js
+      layer: L1
+      type: module
+      purpose: Entity at .sinapse-ai\core\atlas\render-markdown.js
+      keywords:
+        - render
+        - markdown
+      usedBy:
+        - index
+      dependencies: []
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
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+      lastVerified: '2026-06-27T21:56:17.285Z'
+    render-research-card:
+      path: .sinapse-ai/core/atlas/render-research-card.js
+      layer: L1
+      type: module
+      purpose: SINAPSE — Framework de Engenharia Orientada por IA
+      keywords:
+        - render
+        - research
+        - card
+        - sinapse
+        - framework
+        - engenharia
+        - orientada
+        - por
+      usedBy:
+        - sinapse
+      dependencies:
+        - flows-pt
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
+      adaptability:
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+        constraints: []
+        extensionPoints: []
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+      lastVerified: '2026-06-27T21:56:17.285Z'
     code-intel-client:
       path: .sinapse-ai/core/code-intel/code-intel-client.js
       layer: L1
@@ -8708,14 +8859,13 @@ entities:
         - code
         - intel
         - client
-      usedBy:
-        - index
+      usedBy: []
       dependencies:
         - code-graph-provider
         - registry-provider
       externalDeps: []
       plannedDeps: []
-      lifecycle: production
+      lifecycle: experimental
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         constraints: []
@@ -8731,12 +8881,11 @@ entities:
         - code
         - intel
         - enricher
-      usedBy:
-        - index
+      usedBy: []
       dependencies: []
       externalDeps: []
       plannedDeps: []
-      lifecycle: production
+      lifecycle: orphan
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@@ -8891,29 +9040,6 @@ entities:
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       lastVerified: '2026-06-15T00:26:26.368Z'
-    index:
-      path: .sinapse-ai/core/code-intel/index.js
-      layer: L1
-      type: module
-      purpose: Entity at .sinapse-ai\core\code-intel\index.js
-      keywords:
-        - index
-      usedBy: []
-      dependencies:
-        - code-intel-client
-        - code-intel-enricher
-        - provider-interface
-        - code-graph-provider
-        - registry-provider
-      externalDeps: []
-      plannedDeps: []
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     code-graph-provider:
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       layer: L1
@@ -8925,7 +9051,6 @@ entities:
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-        - index
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@@ -8947,7 +9072,6 @@ entities:
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-        - index
         - registry-provider
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@@ -8970,7 +9094,6 @@ entities:
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         - hook-runtime
-        - index
       dependencies:
         - provider-interface
       externalDeps: []
@@ -8995,6 +9118,7 @@ entities:
       dependencies:
         - code-intel
         - registry-loader
+        - atomic-write
       externalDeps: []
       plannedDeps: []
       lifecycle: production
@@ -9002,8 +9126,8 @@ entities:
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       path: .sinapse-ai/core/config/config-cache.js
       layer: L1
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     claude-md:
       path: .sinapse-ai/core/doctor/checks/claude-md.js
       layer: L1
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-      lastVerified: '2026-06-15T00:26:26.371Z'
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     code-intel:
       path: .sinapse-ai/core/doctor/checks/code-intel.js
       layer: L1
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-      lastVerified: '2026-06-15T00:26:26.372Z'
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     ide-sync:
       path: .sinapse-ai/core/doctor/checks/ide-sync.js
       layer: L1
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     skills-count:
       path: .sinapse-ai/core/doctor/checks/skills-count.js
       layer: L1
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-      lastVerified: '2026-06-15T00:26:26.381Z'
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       path: .sinapse-ai/core/graph-dashboard/cli.js
       layer: L1
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       path: .sinapse-ai/core/ids/circuit-breaker.js
       layer: L1
@@ -11539,6 +11663,7 @@ entities:
       dependencies:
         - global-config-manager
         - symlink-manager
+        - atomic-write
       externalDeps: []
       plannedDeps: []
       lifecycle: experimental
@@ -11546,8 +11671,8 @@ entities:
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       path: .sinapse-ai/core/mcp/global-config-manager.js
       layer: L1
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     os-detector:
       path: .sinapse-ai/core/mcp/os-detector.js
       layer: L1
@@ -11603,6 +11728,7 @@ entities:
         - config-migrator
       dependencies:
         - os-detector
+        - atomic-write
       externalDeps: []
       plannedDeps: []
       lifecycle: production
@@ -11610,8 +11736,8 @@ entities:
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       path: .sinapse-ai/core/memory/__tests__/active-modules.verify.js
       layer: L1
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       lastVerified: '2026-06-16T06:09:14.791Z'
+    build-command:
+      path: .sinapse-ai/core/orchestration/build-command.js
+      layer: L1
+      type: module
+      purpose: Entity at .sinapse-ai\core\orchestration\build-command.js
+      keywords:
+        - build
+        - command
+      usedBy:
+        - sinapse
+      dependencies:
+        - doc-first-resolver
+        - index
+      externalDeps: []
+      plannedDeps: []
+      lifecycle: production
+      adaptability:
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       layer: L1
@@ -11891,6 +12039,7 @@ entities:
         - first
         - resolver
       usedBy:
+        - build-command
         - route-command
       dependencies:
         - greenfield-handler
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       layer: L1
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       layer: L1
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       path: .sinapse-ai/core/orchestration/workflow-executor.js
       layer: L1
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       path: .sinapse-ai/core/quality-gates/human-review-orchestrator.js
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     squad-agent-resolver:
       path: .sinapse-ai/core/registry/squad-agent-resolver.js
       layer: L1
@@ -13479,7 +13628,10 @@ entities:
         - atomic
         - write
       usedBy:
+        - config-migrator
         - context-detector
+        - registry-syncer
+        - symlink-manager
         - unified-activation-pipeline
       dependencies: []
       externalDeps: []
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       path: .sinapse-ai/core/synapse/utils/paths.js
       layer: L1
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     sprint-lead:
       path: .sinapse-ai/development/agents/sprint-lead.md
       layer: L2
@@ -15472,8 +15624,8 @@ entities:
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         constraints: []
         extensionPoints: []
-      checksum: sha256:23dbd0d284f4d50bbf6d640d5551261bb6a5ca5cc6d270e8166c0c775b8f1ecc
-      lastVerified: '2026-06-15T00:26:26.496Z'
+      checksum: sha256:b8e32c70260f8a3401be1e3d8ab1f1fd175bce05a99abb5644c0862241abd863
+      lastVerified: '2026-06-28T23:34:42.431Z'
     cicd-discovery:
       path: .sinapse-ai/infrastructure/scripts/cicd-discovery.js
       layer: L2
@@ -15610,6 +15762,7 @@ entities:
         - ${title}
         - activator
       usedBy:
+        - build-command
         - creation-helper
         - dev-helper
         - devops-helper
@@ -16525,8 +16678,8 @@ entities:
         score: 0.7
         constraints: []
         extensionPoints: []
-      checksum: sha256:4aad2c5036b081a4ba35f83a369da876926fcaa14a22be0177fd95d1aa7795bc
-      lastVerified: '2026-06-15T00:26:26.511Z'
+      checksum: sha256:45d2f1cb89f1775504e469f3f5e95395714f8e3a0774e6662c6840a0a215a66b
+      lastVerified: '2026-06-28T23:34:42.440Z'
     performance-analyzer:
       path: .sinapse-ai/infrastructure/scripts/performance-analyzer.js
       layer: L2
@@ -17196,8 +17349,8 @@ entities:
         score: 0.7
         constraints: []
         extensionPoints: []
-      checksum: sha256:9d21c22f72bbf628640eae3d99c9424b95828a996115ed8b4d92c896e2501d34
-      lastVerified: '2026-06-15T00:26:26.518Z'
+      checksum: sha256:ea6d0a15a6dbdc1358b7b51bf144f515eae239512fc0bb24d0b2253586eddcb2
+      lastVerified: '2026-06-28T23:34:42.446Z'
     tool-resolver:
       path: .sinapse-ai/infrastructure/scripts/tool-resolver.js
       layer: L2
@@ -17260,8 +17413,8 @@ entities:
         score: 0.7
         constraints: []
         extensionPoints: []
-      checksum: sha256:4c22a7eeabcd91fe51921e2a559d5a28de7b1a2894d05be9b0f229137015787a
-      lastVerified: '2026-06-15T00:26:26.519Z'
+      checksum: sha256:d87ff786a64c038aa83f106f8a6e174df696b2beeb68b278747299d33dc0f84b
+      lastVerified: '2026-06-28T23:34:42.447Z'
     validate-agents:
       path: .sinapse-ai/infrastructure/scripts/validate-agents.js
       layer: L2

package/.sinapse-ai/data/mcp-discipline.js

@@ -33,7 +33,7 @@ function loadCapabilities() {
 
 function loadMcpConfig() {
   try {
-    return JSON.parse(fs.readFileSync(MCP_JSON_PATH, 'utf8'));
+    return JSON.parse(fs.readFileSync(MCP_JSON_PATH, 'utf8').replace(/^\uFEFF/, ''));
   } catch {
     console.error('❌ Could not read .mcp.json');
     process.exit(1);

package/.sinapse-ai/data/mcp-tool-examples.yaml

@@ -186,16 +186,16 @@ tools:
     essential: true
     note: "Essential Tier 3 — never disabled, gets examples despite ADR-5"
     examples:
-      - description: "Generate dependency graph for package"
+      - description: "Analyze dependencies for a module (dependency_analysis)"
         input:
-          scope: "packages/installer"
-          depth: 2
-        expected: "Returns dependency tree up to 2 levels deep"
-      - description: "Find circular dependencies"
+          tool: dependency_analysis
+          path: "packages/installer/src/index.js"
+        expected: "Returns the dependency graph (nodes + edges) for the module"
+      - description: "Find where a symbol is referenced (find_references)"
         input:
-          scope: "."
-          check: "circular"
-        expected: "Returns list of circular dependency chains if any"
+          tool: find_references
+          symbol: "generateSettingsJson"
+        expected: "Returns all files and locations that reference the symbol"
 
   # ---------------------------------------------------------------------------
   # 10. docker-gateway — MCP infrastructure (Tier 2, 1 profile + infra)

package/.sinapse-ai/data/tok2-validation.js

@@ -142,7 +142,7 @@ function run() {
 
   check(17, 'No functional regression (MCP workflows still work)', () => {
     // MCP servers are still available via tool search — not removed
-    const mcpConfig = JSON.parse(fs.readFileSync(path.join(PROJECT_ROOT, '.mcp.json'), 'utf8'));
+    const mcpConfig = JSON.parse(fs.readFileSync(path.join(PROJECT_ROOT, '.mcp.json'), 'utf8').replace(/^\uFEFF/, ''));
     const servers = mcpConfig.mcpServers || {};
     // Verify essential servers are not disabled
     return !servers.nogic?.disabled && !servers['code-graph']?.disabled;

package/.sinapse-ai/data/tool-registry.yaml

@@ -5,9 +5,10 @@
 # and intelligent tool selection across agents, tasks, and squads.
 #
 # Consumer Module:
-#   This registry is loaded by `.sinapse-ai/core/registry/registry-loader.js`.
-#   Extend the existing loader to read `tool-registry.yaml` alongside
-#   `entity-registry.yaml`. Both follow the same L3 YAML conventions.
+#   This registry is loaded by `.sinapse-ai/data/capability-detection.js`
+#   (loadToolRegistry), which reads `tool-registry.yaml` to count and classify
+#   tools by tier/profile. Follows the same L3 YAML conventions as
+#   `entity-registry.yaml`.
 #
 # Fallback Behavior:
 #   If this file is missing or malformed, the system MUST continue without