sigmap 6.10.9 → 6.10.10

package/AGENTS.md

@@ -61,9 +61,14 @@ Always run `sigmap ask` or `sigmap --query` before searching for files relevant
 src/extractors/python_ast.py ← ast
 ```
 
-## changes (last 5 commits — 7 minutes ago)
+## changes (last 5 commits — 23 minutes ago)
 ```
-src/graph/builder.js                          ~extractFileDeps
+src/discovery/r-manifest.js                   +readDescription  +splitDeps  +readNamespace  +splitArgs
+src/extractors/deps.js                        +extractRDeps  ~extractTSDeps  ~buildReverseDepMap
+src/extractors/r.js                           +members  +regex  +definitions  +body
+src/graph/builder.js                          +normalizePath  +escapeRegex  +resolveRPath  +extractFileDeps
+src/graph/impact.js                           +normalizePath  ~isRouteFile  ~getImpact
+src/retrieval/ranker.js                       ~_computeHubs  ~_isHub
 ```
 
 ## packages
@@ -189,87 +194,6 @@ function adapt(context, adapterName, opts = {}) → string
 
 ## src
 
-### src/mcp/tools.js
-```
-module.exports = { TOOLS }
-```
-
-### src/health/scorer.js
-```
-module.exports = { score }
-function score(cwd) → { * score: number, * grad
-```
-
-### src/extractors/coverage.js
-```
-module.exports = { buildTestIndex, isTested }
-function walkFiles(dir)
-function buildTestIndex(cwd, testDirs)
-function isTested(funcName, testIndex)
-```
-
-### src/extractors/css.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/sql.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-function _cleanName(raw)
-function _normalizeParams(raw)
-```
-
-### src/extractors/graphql.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/protobuf.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/terraform.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/markdown.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/properties.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/toml.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/xml.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
-### src/extractors/patterns.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-```
-
 ### src/extractors/python_dataclass.js
 ```
 module.exports = { extract }
@@ -459,21 +383,6 @@ function loadIgnorePatterns(cwd)
 function matchesIgnorePattern(dirName, patterns)
 ```
 
-### src/retrieval/ranker.js
-```
-module.exports = { rank, buildSigIndex, scoreFile, formatRankTable, formatRankJSON, DEFAULT_WEIGHTS, GRAPH_BOOST_AMOUNTS, detectIntent }
-function _computePenalty(filePath)
-function _computeHubs(graph)
-function _isHub(filePath)
-function scoreFile(filePath, sigs, queryTokens, weights) → { score: number, signals:
-function rank(query, sigIndex, opts) → { file: string, score: nu
-function _parseContextFile(contextPath) → Map<string, string[]>
-function buildSigIndex(cwd, opts) → Map<string, string[]>
-function formatRankTable(results, query) → string
-function formatRankJSON(results, query) → object
-function detectIntent(query)
-```
-
 ### src/plan/planner.js
 ```
 module.exports = { createPlan }
@@ -557,14 +466,6 @@ def extract(filepath)
 def main()
 ```
 
-### src/extractors/r.js
-```
-module.exports = { extract }
-function extract(src) → string[]
-function readBalancedParens(src, openIdx, cap = 4096)
-function normalizeParams(raw)
-```
-
 ### src/discovery/source-root-resolver.js
 ```
 module.exports = { resolveSourceRoots }
@@ -624,15 +525,65 @@ function buildReverseGraph(graph)
 function analyze(files, cwd)
 ```
 
+### src/discovery/r-manifest.js
+```
+module.exports = { readDescription, readNamespace, collectLocalDefs }
+function readDescription(cwd) → object|null
+function splitDeps(value)
+function readNamespace(cwd) → object|null
+function splitArgs(raw)
+function stripQuotes(s)
+function collectLocalDefs(rFiles) → Map<string, string>
+```
+
+### src/extractors/deps.js
+```
+module.exports = { extractPythonDeps, extractTSDeps, extractRDeps, buildReverseDepMap }
+function extractPythonDeps(src) → string[]
+function extractTSDeps(src) → string[]
+function extractRDeps(src) → string[]
+function buildReverseDepMap(forwardMap) → Map<string, string[]>
+```
+
+### src/extractors/r.js
+```
+module.exports = { extract }
+function extract(src) → string[]
+function collectRoxygenHints(src)
+function pickRoxygenLine(block, tag)
+function applyHint(hints, name)
+function extractListMethods(body, cap)
+function inAnyRange(pos, ranges)
+function readFirstStringArg(body)
+function readBalancedParens(src, openIdx, cap = 16384)
+function normalizeParams(raw)
+```
+
 ### src/graph/builder.js
 ```
-module.exports = { build, buildFromCwd, extractFileDeps }
+module.exports = { build, buildFromCwd, extractFileDeps, normalizePath }
+function normalizePath(p)
 function resolveJsPath(dir, importStr, fileSet) → string|null
-function extractFileDeps(filePath, content, fileSet) → string[]
-function build(files, cwd) → { forward: Map<string,str
+function escapeRegex(s)
+function resolveRPath(dir, importStr, fileSet, cwd)
+function extractFileDeps(filePath, content, fileSet, cwd, ctx) → string[]
+function build(files, cwd, ctx) → { forward: Map<string,str
 function buildFromCwd(cwd, opts) → { forward: Map<string,str
 ```
 
+### src/graph/impact.js
+```
+module.exports = { getImpact, analyzeImpact, formatImpact, formatImpactJSON }
+function normalizePath(p)
+function bfs(startFile, reverseGraph, maxDepth) → { direct: Set<string>, tr
+function isTestFile(f)
+function isRouteFile(f)
+function getImpact(changedFile, graph, opts) → { * changed: string, * di
+function analyzeImpact(changedFiles, cwd, opts) → { file: string, impact: o
+function formatImpact(result) → string
+function formatImpactJSON(result) → object
+```
+
 ### src/mcp/server.js
 ```
 module.exports = { start }
@@ -641,3 +592,18 @@ function respondError(id, code, message)
 function dispatch(msg, cwd)
 function start(cwd)
 ```
+
+### src/retrieval/ranker.js
+```
+module.exports = { rank, buildSigIndex, scoreFile, formatRankTable, formatRankJSON, DEFAULT_WEIGHTS, GRAPH_BOOST_AMOUNTS, detectIntent }
+function _computePenalty(filePath)
+function _computeHubs(graph)
+function _isHub(filePath)
+function scoreFile(filePath, sigs, queryTokens, weights) → { score: number, signals:
+function rank(query, sigIndex, opts) → { file: string, score: nu
+function _parseContextFile(contextPath) → Map<string, string[]>
+function buildSigIndex(cwd, opts) → Map<string, string[]>
+function formatRankTable(results, query) → string
+function formatRankJSON(results, query) → object
+function detectIntent(query)
+```

package/CHANGELOG.md

@@ -10,6 +10,25 @@ Format: [Semantic Versioning](https://semver.org/)
 
 ---
 
+## [6.10.10] — 2026-05-12
+
+### Added
+
+- **First-class R support** — R was already in the language detector and had an extractor, but several gaps stopped it from being usable end-to-end:
+  - Registered `.r`/`.R` in `gen-context.js` `EXT_MAP` so the main pipeline actually invokes the R extractor (previously wired into the eval/analyzer path only).
+  - Extended the dependency-graph builder (`src/graph/builder.js`) with an R branch: parses `source("path/file.R")` calls and, for R packages, resolves `localPkg::fn` references to the file that defines `fn` via a one-pass symbol scan over `R/`. `buildFromCwd` defaults now include `R/` and `inst/` dirs and Shiny entry files (`app.R`, `server.R`, `ui.R`, `global.R`).
+  - Extended the R extractor (`src/extractors/r.js`) with R6 class detection (`Name <- R6Class("Name", public = list(...))`), S7 class detection (`Name <- new_class("Name", ...)` + `method(generic, Name) <- function(...)`), and roxygen2 docstring hints appended to function/class sigs (mirroring the Python extractor's docstring pattern).
+  - New `src/discovery/r-manifest.js` module with zero-dep parsers for `DESCRIPTION` (Debian-control format, handles continuation lines and version constraints) and `NAMESPACE` (`export`, `exportPattern`, `exportMethods`, `S3method`, `importFrom`).
+  - Added `extractRDeps` to `src/extractors/deps.js` for the dep-map section, recognising `library()`/`require()`/`requireNamespace("…")` and `pkg::fn`, skipping R base packages.
+  - Extended the ranker's hub heuristic to recognise `R/utils.R`, `R/zzz.R`, `R/globals.R` and `*.r/*.R` files in the common hub-name set.
+  - Test fixture `test/fixtures/r-package/` (DESCRIPTION + NAMESPACE + `R/`) and 8 new tests in `test/r-language.test.js` cover manifest parsing, `source()` edge emission, namespace-aware resolution, and hub detection. Existing `test/fixtures/r.r` extended with R6/S7/richer roxygen2 (closes #190).
+
+### Fixed
+
+- **Windows path normalization in get_impact** — Implement case-insensitive path lookups in dependency graph for Windows compatibility. All paths in forward/reverse maps now normalized to lowercase, enabling `get_impact` to work correctly when file paths have different case (e.g., `src/Ledger/equity_ledger.py` vs `src/ledger/equity_ledger.py`). Applied normalization uniformly across JS, Python, Go, Rust, JVM, Ruby, and R import detection (closes #193).
+
+---
+
 ## [6.10.9] — 2026-05-12
 
 ### Changed