sigmap 6.10.7 → 6.10.10

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package/AGENTS.md CHANGED
@@ -61,10 +61,14 @@ Always run `sigmap ask` or `sigmap --query` before searching for files relevant
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  src/extractors/python_ast.py ← ast
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  ```
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- ## changes (last 5 commits — 11 minutes ago)
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+ ## changes (last 5 commits — 23 minutes ago)
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  ```
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- src/analysis/diagnostics.js +estimateTokens +formatFileDecision +computeFileMetrics +explainInclusion
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- src/map/import-graph.js +buildReverseGraph ~extractImports ~resolveJsPath ~detectCycles
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+ src/discovery/r-manifest.js +readDescription +splitDeps +readNamespace +splitArgs
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+ src/extractors/deps.js +extractRDeps ~extractTSDeps ~buildReverseDepMap
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+ src/extractors/r.js +members +regex +definitions +body
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+ src/graph/builder.js +normalizePath +escapeRegex +resolveRPath +extractFileDeps
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+ src/graph/impact.js +normalizePath ~isRouteFile ~getImpact
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+ src/retrieval/ranker.js ~_computeHubs ~_isHub
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  ```
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  ## packages
@@ -190,87 +194,6 @@ function adapt(context, adapterName, opts = {}) → string
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  ## src
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- ### src/mcp/tools.js
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- ```
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- module.exports = { TOOLS }
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- ```
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-
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- ### src/health/scorer.js
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- ```
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- module.exports = { score }
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- function score(cwd) → { * score: number, * grad
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- ```
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-
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- ### src/extractors/coverage.js
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- ```
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- module.exports = { buildTestIndex, isTested }
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- function walkFiles(dir)
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- function buildTestIndex(cwd, testDirs)
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- function isTested(funcName, testIndex)
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- ```
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-
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- ### src/extractors/css.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/sql.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- function _cleanName(raw)
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- function _normalizeParams(raw)
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- ```
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-
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- ### src/extractors/graphql.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/protobuf.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/terraform.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/markdown.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/properties.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/toml.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/xml.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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- ### src/extractors/patterns.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- ```
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-
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  ### src/extractors/python_dataclass.js
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  ```
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  module.exports = { extract }
@@ -460,21 +383,6 @@ function loadIgnorePatterns(cwd)
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  function matchesIgnorePattern(dirName, patterns)
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  ```
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- ### src/retrieval/ranker.js
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- ```
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- module.exports = { rank, buildSigIndex, scoreFile, formatRankTable, formatRankJSON, DEFAULT_WEIGHTS, GRAPH_BOOST_AMOUNTS, detectIntent }
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- function _computePenalty(filePath)
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- function _computeHubs(graph)
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- function _isHub(filePath)
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- function scoreFile(filePath, sigs, queryTokens, weights) → { score: number, signals:
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- function rank(query, sigIndex, opts) → { file: string, score: nu
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- function _parseContextFile(contextPath) → Map<string, string[]>
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- function buildSigIndex(cwd, opts) → Map<string, string[]>
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- function formatRankTable(results, query) → string
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- function formatRankJSON(results, query) → object
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- function detectIntent(query)
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- ```
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-
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  ### src/plan/planner.js
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  ```
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  module.exports = { createPlan }
@@ -558,14 +466,6 @@ def extract(filepath)
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  def main()
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  ```
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- ### src/extractors/r.js
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- ```
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- module.exports = { extract }
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- function extract(src) → string[]
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- function readBalancedParens(src, openIdx, cap = 4096)
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- function normalizeParams(raw)
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- ```
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-
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  ### src/discovery/source-root-resolver.js
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  ```
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  module.exports = { resolveSourceRoots }
@@ -625,6 +525,65 @@ function buildReverseGraph(graph)
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  function analyze(files, cwd)
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  ```
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+ ### src/discovery/r-manifest.js
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+ ```
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+ module.exports = { readDescription, readNamespace, collectLocalDefs }
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+ function readDescription(cwd) → object|null
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+ function splitDeps(value)
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+ function readNamespace(cwd) → object|null
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+ function splitArgs(raw)
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+ function stripQuotes(s)
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+ function collectLocalDefs(rFiles) → Map<string, string>
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+ ```
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+
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+ ### src/extractors/deps.js
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+ ```
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+ module.exports = { extractPythonDeps, extractTSDeps, extractRDeps, buildReverseDepMap }
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+ function extractPythonDeps(src) → string[]
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+ function extractTSDeps(src) → string[]
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+ function extractRDeps(src) → string[]
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+ function buildReverseDepMap(forwardMap) → Map<string, string[]>
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+ ```
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+
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+ ### src/extractors/r.js
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+ ```
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+ module.exports = { extract }
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+ function extract(src) → string[]
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+ function collectRoxygenHints(src)
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+ function pickRoxygenLine(block, tag)
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+ function applyHint(hints, name)
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+ function extractListMethods(body, cap)
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+ function inAnyRange(pos, ranges)
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+ function readFirstStringArg(body)
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+ function readBalancedParens(src, openIdx, cap = 16384)
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+ function normalizeParams(raw)
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+ ```
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+
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+ ### src/graph/builder.js
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+ ```
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+ module.exports = { build, buildFromCwd, extractFileDeps, normalizePath }
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+ function normalizePath(p)
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+ function resolveJsPath(dir, importStr, fileSet) → string|null
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+ function escapeRegex(s)
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+ function resolveRPath(dir, importStr, fileSet, cwd)
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+ function extractFileDeps(filePath, content, fileSet, cwd, ctx) → string[]
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+ function build(files, cwd, ctx) → { forward: Map<string,str
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+ function buildFromCwd(cwd, opts) → { forward: Map<string,str
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+ ```
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+
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+ ### src/graph/impact.js
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+ ```
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+ module.exports = { getImpact, analyzeImpact, formatImpact, formatImpactJSON }
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+ function normalizePath(p)
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+ function bfs(startFile, reverseGraph, maxDepth) → { direct: Set<string>, tr
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+ function isTestFile(f)
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+ function isRouteFile(f)
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+ function getImpact(changedFile, graph, opts) → { * changed: string, * di
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+ function analyzeImpact(changedFiles, cwd, opts) → { file: string, impact: o
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+ function formatImpact(result) → string
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+ function formatImpactJSON(result) → object
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+ ```
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+
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  ### src/mcp/server.js
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  ```
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  module.exports = { start }
@@ -633,3 +592,18 @@ function respondError(id, code, message)
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  function dispatch(msg, cwd)
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  function start(cwd)
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  ```
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+
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+ ### src/retrieval/ranker.js
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+ ```
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+ module.exports = { rank, buildSigIndex, scoreFile, formatRankTable, formatRankJSON, DEFAULT_WEIGHTS, GRAPH_BOOST_AMOUNTS, detectIntent }
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+ function _computePenalty(filePath)
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+ function _computeHubs(graph)
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+ function _isHub(filePath)
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+ function scoreFile(filePath, sigs, queryTokens, weights) → { score: number, signals:
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+ function rank(query, sigIndex, opts) → { file: string, score: nu
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+ function _parseContextFile(contextPath) → Map<string, string[]>
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+ function buildSigIndex(cwd, opts) → Map<string, string[]>
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+ function formatRankTable(results, query) → string
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+ function formatRankJSON(results, query) → object
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+ function detectIntent(query)
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+ ```
package/CHANGELOG.md CHANGED
@@ -10,6 +10,41 @@ Format: [Semantic Versioning](https://semver.org/)
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  ---
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+ ## [6.10.10] — 2026-05-12
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+
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+ ### Added
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+
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+ - **First-class R support** — R was already in the language detector and had an extractor, but several gaps stopped it from being usable end-to-end:
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+ - Registered `.r`/`.R` in `gen-context.js` `EXT_MAP` so the main pipeline actually invokes the R extractor (previously wired into the eval/analyzer path only).
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+ - Extended the dependency-graph builder (`src/graph/builder.js`) with an R branch: parses `source("path/file.R")` calls and, for R packages, resolves `localPkg::fn` references to the file that defines `fn` via a one-pass symbol scan over `R/`. `buildFromCwd` defaults now include `R/` and `inst/` dirs and Shiny entry files (`app.R`, `server.R`, `ui.R`, `global.R`).
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+ - Extended the R extractor (`src/extractors/r.js`) with R6 class detection (`Name <- R6Class("Name", public = list(...))`), S7 class detection (`Name <- new_class("Name", ...)` + `method(generic, Name) <- function(...)`), and roxygen2 docstring hints appended to function/class sigs (mirroring the Python extractor's docstring pattern).
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+ - New `src/discovery/r-manifest.js` module with zero-dep parsers for `DESCRIPTION` (Debian-control format, handles continuation lines and version constraints) and `NAMESPACE` (`export`, `exportPattern`, `exportMethods`, `S3method`, `importFrom`).
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+ - Added `extractRDeps` to `src/extractors/deps.js` for the dep-map section, recognising `library()`/`require()`/`requireNamespace("…")` and `pkg::fn`, skipping R base packages.
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+ - Extended the ranker's hub heuristic to recognise `R/utils.R`, `R/zzz.R`, `R/globals.R` and `*.r/*.R` files in the common hub-name set.
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+ - Test fixture `test/fixtures/r-package/` (DESCRIPTION + NAMESPACE + `R/`) and 8 new tests in `test/r-language.test.js` cover manifest parsing, `source()` edge emission, namespace-aware resolution, and hub detection. Existing `test/fixtures/r.r` extended with R6/S7/richer roxygen2 (closes #190).
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+ ### Fixed
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+
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+ - **Windows path normalization in get_impact** — Implement case-insensitive path lookups in dependency graph for Windows compatibility. All paths in forward/reverse maps now normalized to lowercase, enabling `get_impact` to work correctly when file paths have different case (e.g., `src/Ledger/equity_ledger.py` vs `src/ledger/equity_ledger.py`). Applied normalization uniformly across JS, Python, Go, Rust, JVM, Ruby, and R import detection (closes #193).
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+
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+ ---
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+
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+ ## [6.10.9] — 2026-05-12
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+ ### Changed
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+ - **Documentation updates** — Updated roadmap to reflect v6.10.8 completion with Python import detection in builder.js for get_impact MCP tool.
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+
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+ ---
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+
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+ ## [6.10.8] — 2026-05-12
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+ ### Fixed
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+ - **Python absolute imports in builder.js for get_impact** — Added Python absolute import detection to `src/graph/builder.js` used by the `get_impact` MCP tool. Previously only `import-graph.js` had this support, causing `get_impact` to return empty blast radius for Python monorepos. Now both tools correctly detect `from package.module import X` patterns (closes #187).
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+
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+ ---
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+
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  ## [6.10.7] — 2026-05-12
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  ### Fixed