sequant 1.1.1 → 1.1.3

package/dist/src/lib/workflow/run-log-schema.test.js

@@ -0,0 +1,455 @@
+import { describe, it, expect, vi, beforeEach, afterEach } from "vitest";
+import { PhaseSchema, PhaseStatusSchema, IssueStatusSchema, PhaseLogSchema, IssueLogSchema, RunConfigSchema, RunLogSchema, LOG_PATHS, generateLogFilename, createEmptyRunLog, createPhaseLog, completePhaseLog, finalizeRunLog, } from "./run-log-schema.js";
+describe("Zod Schemas", () => {
+    describe("PhaseSchema", () => {
+        it("accepts valid phases", () => {
+            const validPhases = ["spec", "testgen", "exec", "test", "qa", "loop"];
+            for (const phase of validPhases) {
+                expect(() => PhaseSchema.parse(phase)).not.toThrow();
+            }
+        });
+        it("rejects invalid phases", () => {
+            expect(() => PhaseSchema.parse("invalid")).toThrow();
+            expect(() => PhaseSchema.parse("")).toThrow();
+            expect(() => PhaseSchema.parse(123)).toThrow();
+        });
+    });
+    describe("PhaseStatusSchema", () => {
+        it("accepts valid statuses", () => {
+            const validStatuses = ["success", "failure", "timeout", "skipped"];
+            for (const status of validStatuses) {
+                expect(() => PhaseStatusSchema.parse(status)).not.toThrow();
+            }
+        });
+        it("rejects invalid statuses", () => {
+            expect(() => PhaseStatusSchema.parse("pending")).toThrow();
+            expect(() => PhaseStatusSchema.parse("error")).toThrow();
+        });
+    });
+    describe("IssueStatusSchema", () => {
+        it("accepts valid statuses", () => {
+            const validStatuses = ["success", "failure", "partial"];
+            for (const status of validStatuses) {
+                expect(() => IssueStatusSchema.parse(status)).not.toThrow();
+            }
+        });
+        it("rejects invalid statuses", () => {
+            expect(() => IssueStatusSchema.parse("pending")).toThrow();
+        });
+    });
+    describe("PhaseLogSchema", () => {
+        const validPhaseLog = {
+            phase: "spec",
+            issueNumber: 123,
+            startTime: "2024-01-01T10:00:00.000Z",
+            endTime: "2024-01-01T10:05:00.000Z",
+            durationSeconds: 300,
+            status: "success",
+        };
+        it("accepts valid phase log", () => {
+            expect(() => PhaseLogSchema.parse(validPhaseLog)).not.toThrow();
+        });
+        it("accepts phase log with optional fields", () => {
+            const withOptionals = {
+                ...validPhaseLog,
+                error: "Something went wrong",
+                iterations: 3,
+                filesModified: ["file1.ts", "file2.ts"],
+                testsRun: 10,
+                testsPassed: 8,
+            };
+            expect(() => PhaseLogSchema.parse(withOptionals)).not.toThrow();
+        });
+        it("rejects negative issue number", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, issueNumber: -1 })).toThrow();
+        });
+        it("rejects zero issue number", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, issueNumber: 0 })).toThrow();
+        });
+        it("rejects non-integer issue number", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, issueNumber: 1.5 })).toThrow();
+        });
+        it("rejects negative duration", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, durationSeconds: -1 })).toThrow();
+        });
+        it("accepts zero duration", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, durationSeconds: 0 })).not.toThrow();
+        });
+        it("rejects invalid datetime format", () => {
+            expect(() => PhaseLogSchema.parse({ ...validPhaseLog, startTime: "invalid" })).toThrow();
+        });
+    });
+    describe("IssueLogSchema", () => {
+        const validPhaseLog = {
+            phase: "spec",
+            issueNumber: 123,
+            startTime: "2024-01-01T10:00:00.000Z",
+            endTime: "2024-01-01T10:05:00.000Z",
+            durationSeconds: 300,
+            status: "success",
+        };
+        const validIssueLog = {
+            issueNumber: 123,
+            title: "Test Issue",
+            labels: ["bug", "priority-high"],
+            status: "success",
+            phases: [validPhaseLog],
+            totalDurationSeconds: 300,
+        };
+        it("accepts valid issue log", () => {
+            expect(() => IssueLogSchema.parse(validIssueLog)).not.toThrow();
+        });
+        it("accepts empty labels array", () => {
+            expect(() => IssueLogSchema.parse({ ...validIssueLog, labels: [] })).not.toThrow();
+        });
+        it("accepts empty phases array", () => {
+            expect(() => IssueLogSchema.parse({ ...validIssueLog, phases: [] })).not.toThrow();
+        });
+        it("rejects missing required fields", () => {
+            const { title, ...withoutTitle } = validIssueLog;
+            expect(() => IssueLogSchema.parse(withoutTitle)).toThrow();
+        });
+    });
+    describe("RunConfigSchema", () => {
+        const validConfig = {
+            phases: ["spec", "exec", "qa"],
+            sequential: false,
+            qualityLoop: true,
+            maxIterations: 3,
+        };
+        it("accepts valid config", () => {
+            expect(() => RunConfigSchema.parse(validConfig)).not.toThrow();
+        });
+        it("accepts empty phases array", () => {
+            expect(() => RunConfigSchema.parse({ ...validConfig, phases: [] })).not.toThrow();
+        });
+        it("rejects zero maxIterations", () => {
+            expect(() => RunConfigSchema.parse({ ...validConfig, maxIterations: 0 })).toThrow();
+        });
+        it("rejects negative maxIterations", () => {
+            expect(() => RunConfigSchema.parse({ ...validConfig, maxIterations: -1 })).toThrow();
+        });
+    });
+    describe("RunLogSchema", () => {
+        const validRunLog = {
+            version: 1,
+            runId: "550e8400-e29b-41d4-a716-446655440000",
+            startTime: "2024-01-01T10:00:00.000Z",
+            endTime: "2024-01-01T10:30:00.000Z",
+            config: {
+                phases: ["spec", "exec", "qa"],
+                sequential: false,
+                qualityLoop: false,
+                maxIterations: 3,
+            },
+            issues: [],
+            summary: {
+                totalIssues: 0,
+                passed: 0,
+                failed: 0,
+                totalDurationSeconds: 1800,
+            },
+        };
+        it("accepts valid run log", () => {
+            expect(() => RunLogSchema.parse(validRunLog)).not.toThrow();
+        });
+        it("rejects invalid version", () => {
+            expect(() => RunLogSchema.parse({ ...validRunLog, version: 2 })).toThrow();
+        });
+        it("rejects invalid UUID", () => {
+            expect(() => RunLogSchema.parse({ ...validRunLog, runId: "not-a-uuid" })).toThrow();
+        });
+        it("validates nested issue logs", () => {
+            const withIssues = {
+                ...validRunLog,
+                issues: [
+                    {
+                        issueNumber: 123,
+                        title: "Test",
+                        labels: [],
+                        status: "success",
+                        phases: [],
+                        totalDurationSeconds: 100,
+                    },
+                ],
+                summary: { ...validRunLog.summary, totalIssues: 1, passed: 1 },
+            };
+            expect(() => RunLogSchema.parse(withIssues)).not.toThrow();
+        });
+    });
+});
+describe("LOG_PATHS", () => {
+    it("has user path with home directory placeholder", () => {
+        expect(LOG_PATHS.user).toBe("~/.sequant/logs");
+    });
+    it("has project-relative path", () => {
+        expect(LOG_PATHS.project).toBe(".sequant/logs");
+    });
+});
+describe("generateLogFilename", () => {
+    it("generates filename with timestamp and runId", () => {
+        const runId = "550e8400-e29b-41d4-a716-446655440000";
+        const startTime = new Date("2024-01-15T14:30:45.123Z");
+        const filename = generateLogFilename(runId, startTime);
+        expect(filename).toBe(`run-2024-01-15T14-30-45-${runId}.json`);
+    });
+    it("replaces colons and dots in timestamp", () => {
+        const runId = "test-uuid";
+        const startTime = new Date("2024-12-31T23:59:59.999Z");
+        const filename = generateLogFilename(runId, startTime);
+        expect(filename).not.toContain(":");
+        expect(filename).toMatch(/^run-\d{4}-\d{2}-\d{2}T\d{2}-\d{2}-\d{2}/);
+    });
+    it("ends with .json extension", () => {
+        const filename = generateLogFilename("id", new Date());
+        expect(filename).toMatch(/\.json$/);
+    });
+});
+describe("createEmptyRunLog", () => {
+    const config = {
+        phases: ["spec", "exec", "qa"],
+        sequential: false,
+        qualityLoop: true,
+        maxIterations: 3,
+    };
+    it("creates log with provided config", () => {
+        const log = createEmptyRunLog(config);
+        expect(log.config).toEqual(config);
+    });
+    it("generates valid UUID for runId", () => {
+        const log = createEmptyRunLog(config);
+        // UUID v4 format
+        expect(log.runId).toMatch(/^[0-9a-f]{8}-[0-9a-f]{4}-4[0-9a-f]{3}-[89ab][0-9a-f]{3}-[0-9a-f]{12}$/i);
+    });
+    it("sets version to 1", () => {
+        const log = createEmptyRunLog(config);
+        expect(log.version).toBe(1);
+    });
+    it("sets startTime to current time", () => {
+        const before = new Date();
+        const log = createEmptyRunLog(config);
+        const after = new Date();
+        const startTime = new Date(log.startTime);
+        expect(startTime.getTime()).toBeGreaterThanOrEqual(before.getTime());
+        expect(startTime.getTime()).toBeLessThanOrEqual(after.getTime());
+    });
+    it("initializes empty issues array", () => {
+        const log = createEmptyRunLog(config);
+        expect(log.issues).toEqual([]);
+    });
+    it("initializes summary with zeros", () => {
+        const log = createEmptyRunLog(config);
+        expect(log.summary).toEqual({
+            totalIssues: 0,
+            passed: 0,
+            failed: 0,
+            totalDurationSeconds: 0,
+        });
+    });
+    it("does not include endTime", () => {
+        const log = createEmptyRunLog(config);
+        expect(log).not.toHaveProperty("endTime");
+    });
+});
+describe("createPhaseLog", () => {
+    it("creates log with provided phase and issue number", () => {
+        const log = createPhaseLog("exec", 456);
+        expect(log.phase).toBe("exec");
+        expect(log.issueNumber).toBe(456);
+    });
+    it("sets startTime to current time", () => {
+        const before = new Date();
+        const log = createPhaseLog("spec", 123);
+        const after = new Date();
+        const startTime = new Date(log.startTime);
+        expect(startTime.getTime()).toBeGreaterThanOrEqual(before.getTime());
+        expect(startTime.getTime()).toBeLessThanOrEqual(after.getTime());
+    });
+    it("does not include endTime, durationSeconds, or status", () => {
+        const log = createPhaseLog("qa", 789);
+        expect(log).not.toHaveProperty("endTime");
+        expect(log).not.toHaveProperty("durationSeconds");
+        expect(log).not.toHaveProperty("status");
+    });
+});
+describe("completePhaseLog", () => {
+    let partialLog;
+    beforeEach(() => {
+        // Create a phase log with a known start time
+        vi.useFakeTimers();
+        vi.setSystemTime(new Date("2024-01-01T10:00:00.000Z"));
+        partialLog = createPhaseLog("exec", 123);
+    });
+    afterEach(() => {
+        vi.useRealTimers();
+    });
+    it("adds endTime, durationSeconds, and status", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:05:00.000Z"));
+        const completed = completePhaseLog(partialLog, "success");
+        expect(completed.endTime).toBe("2024-01-01T10:05:00.000Z");
+        expect(completed.durationSeconds).toBe(300); // 5 minutes
+        expect(completed.status).toBe("success");
+    });
+    it("calculates duration correctly", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:00:30.500Z"));
+        const completed = completePhaseLog(partialLog, "success");
+        expect(completed.durationSeconds).toBe(30.5);
+    });
+    it("preserves original fields", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "failure");
+        expect(completed.phase).toBe("exec");
+        expect(completed.issueNumber).toBe(123);
+        expect(completed.startTime).toBe("2024-01-01T10:00:00.000Z");
+    });
+    it("adds optional error field", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "failure", {
+            error: "Build failed",
+        });
+        expect(completed.error).toBe("Build failed");
+    });
+    it("adds optional iterations field", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "success", {
+            iterations: 3,
+        });
+        expect(completed.iterations).toBe(3);
+    });
+    it("adds optional filesModified field", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "success", {
+            filesModified: ["src/index.ts", "src/utils.ts"],
+        });
+        expect(completed.filesModified).toEqual(["src/index.ts", "src/utils.ts"]);
+    });
+    it("adds optional test count fields", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "success", {
+            testsRun: 50,
+            testsPassed: 48,
+        });
+        expect(completed.testsRun).toBe(50);
+        expect(completed.testsPassed).toBe(48);
+    });
+    it("handles all optional fields together", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:01:00.000Z"));
+        const completed = completePhaseLog(partialLog, "failure", {
+            error: "2 tests failed",
+            iterations: 2,
+            filesModified: ["test.ts"],
+            testsRun: 10,
+            testsPassed: 8,
+        });
+        expect(completed.error).toBe("2 tests failed");
+        expect(completed.iterations).toBe(2);
+        expect(completed.filesModified).toEqual(["test.ts"]);
+        expect(completed.testsRun).toBe(10);
+        expect(completed.testsPassed).toBe(8);
+    });
+});
+describe("finalizeRunLog", () => {
+    const config = {
+        phases: ["spec", "exec", "qa"],
+        sequential: false,
+        qualityLoop: false,
+        maxIterations: 3,
+    };
+    let partialRunLog;
+    beforeEach(() => {
+        vi.useFakeTimers();
+        vi.setSystemTime(new Date("2024-01-01T10:00:00.000Z"));
+        const emptyLog = createEmptyRunLog(config);
+        partialRunLog = {
+            ...emptyLog,
+            issues: [],
+        };
+    });
+    afterEach(() => {
+        vi.useRealTimers();
+    });
+    it("adds endTime", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.endTime).toBe("2024-01-01T10:30:00.000Z");
+    });
+    it("calculates totalDurationSeconds", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.totalDurationSeconds).toBe(1800); // 30 minutes
+    });
+    it("counts passed issues correctly", () => {
+        partialRunLog.issues = [
+            createMockIssueLog(1, "success"),
+            createMockIssueLog(2, "success"),
+            createMockIssueLog(3, "failure"),
+        ];
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.passed).toBe(2);
+    });
+    it("counts failed issues correctly", () => {
+        partialRunLog.issues = [
+            createMockIssueLog(1, "success"),
+            createMockIssueLog(2, "failure"),
+            createMockIssueLog(3, "failure"),
+        ];
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.failed).toBe(2);
+    });
+    it("counts partial status as neither passed nor failed", () => {
+        partialRunLog.issues = [
+            createMockIssueLog(1, "success"),
+            createMockIssueLog(2, "partial"),
+            createMockIssueLog(3, "failure"),
+        ];
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.passed).toBe(1);
+        expect(finalized.summary.failed).toBe(1);
+        expect(finalized.summary.totalIssues).toBe(3);
+    });
+    it("sets totalIssues from issues array length", () => {
+        partialRunLog.issues = [
+            createMockIssueLog(1, "success"),
+            createMockIssueLog(2, "success"),
+        ];
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.totalIssues).toBe(2);
+    });
+    it("handles empty issues array", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.summary.totalIssues).toBe(0);
+        expect(finalized.summary.passed).toBe(0);
+        expect(finalized.summary.failed).toBe(0);
+    });
+    it("preserves original fields", () => {
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(finalized.version).toBe(1);
+        expect(finalized.runId).toBe(partialRunLog.runId);
+        expect(finalized.startTime).toBe(partialRunLog.startTime);
+        expect(finalized.config).toEqual(config);
+    });
+    it("produces valid RunLog according to schema", () => {
+        partialRunLog.issues = [createMockIssueLog(1, "success")];
+        vi.setSystemTime(new Date("2024-01-01T10:30:00.000Z"));
+        const finalized = finalizeRunLog(partialRunLog);
+        expect(() => RunLogSchema.parse(finalized)).not.toThrow();
+    });
+});
+// Helper function for tests
+function createMockIssueLog(issueNumber, status) {
+    return {
+        issueNumber,
+        title: `Issue #${issueNumber}`,
+        labels: [],
+        status,
+        phases: [],
+        totalDurationSeconds: 100,
+    };
+}
+//# sourceMappingURL=run-log-schema.test.js.map

package/dist/src/lib/workflow/run-log-schema.test.js.map

@@ -0,0 +1 @@
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package/dist/src/lib/workflow/types.d.ts

@@ -46,6 +46,8 @@ export interface PhaseResult {
     success: boolean;
     durationSeconds?: number;
     error?: string;
+    /** Captured output from the phase (used for parsing spec recommendations) */
+    output?: string;
 }
 /**
  * Result of executing all phases for an issue

package/dist/src/lib/workflow/types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../../src/lib/workflow/types.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH;;GAEG;AACH,MAAM,MAAM,KAAK,GAAG,MAAM,GAAG,SAAS,GAAG,MAAM,GAAG,MAAM,GAAG,IAAI,GAAG,MAAM,CAAC;AAEzE;;GAEG;AACH,eAAO,MAAM,cAAc,EAAE,KAAK,EAA2B,CAAC;AAE9D;;GAEG;AACH,MAAM,WAAW,eAAe;IAC9B,wBAAwB;IACxB,MAAM,EAAE,KAAK,EAAE,CAAC;IAChB,mCAAmC;IACnC,YAAY,EAAE,MAAM,CAAC;IACrB,+BAA+B;IAC/B,WAAW,EAAE,OAAO,CAAC;IACrB,sCAAsC;IACtC,aAAa,EAAE,MAAM,CAAC;IACtB,mCAAmC;IACnC,gBAAgB,EAAE,OAAO,CAAC;IAC1B,8BAA8B;IAC9B,UAAU,EAAE,OAAO,CAAC;IACpB,4CAA4C;IAC5C,aAAa,EAAE,OAAO,CAAC;IACvB,qBAAqB;IACrB,OAAO,EAAE,OAAO,CAAC;IACjB,mCAAmC;IACnC,YAAY,EAAE,OAAO,CAAC;IACtB,4CAA4C;IAC5C,MAAM,EAAE,OAAO,CAAC;CACjB;AAED;;GAEG;AACH,eAAO,MAAM,cAAc,EAAE,eAW5B,CAAC;AAEF;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,KAAK,EAAE,KAAK,CAAC;IACb,OAAO,EAAE,OAAO,CAAC;IACjB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,6EAA6E;IAC7E,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,OAAO,CAAC;IACjB,YAAY,EAAE,WAAW,EAAE,CAAC;IAC5B,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,eAAe,CAAC,EAAE,MAAM,CAAC;CAC1B;AAED;;GAEG;AACH,MAAM,WAAW,iBAAiB;IAChC,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,WAAW,CAAC,EAAE,OAAO,CAAC;CACvB;AAED;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,WAAW,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB;AAED;;GAEG;AACH,MAAM,WAAW,WAAW;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,EAAE,WAAW,EAAE,CAAC;IAC5B,OAAO,EAAE,OAAO,CAAC;CAClB"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "sequant",
-  "version": "1.1.1",
+  "version": "1.1.3",
   "description": "Quantize your development workflow - Sequential AI phases with quality gates",
   "type": "module",
   "bin": {
@@ -53,6 +53,7 @@
     "node": ">=18.0.0"
   },
   "dependencies": {
+    "@anthropic-ai/claude-agent-sdk": "^0.2.1",
     "chalk": "^5.3.0",
     "commander": "^12.1.0",
     "diff": "^7.0.0",

package/templates/hooks/pre-tool.sh

@@ -199,8 +199,20 @@ fi
 # Skips for --amend since amending doesn't require new changes
 if [[ "$TOOL_NAME" == "Bash" ]] && echo "$TOOL_INPUT" | grep -qE 'git commit'; then
     if ! echo "$TOOL_INPUT" | grep -qE -- '--amend|--allow-empty'; then
-        # Check for changes (staged or unstaged)
-        CHANGES=$(git status --porcelain 2>/dev/null | wc -l | tr -d ' ')
+        # Extract target directory from cd command if present (for worktree commits)
+        # Handles: "cd /path && git commit" or "cd /path; git commit"
+        TARGET_DIR=""
+        if echo "$TOOL_INPUT" | grep -qE '^cd [^;&|]+'; then
+            TARGET_DIR=$(echo "$TOOL_INPUT" | grep -oE '^cd [^;&|]+' | head -1 | sed 's/^cd //' | tr -d ' ')
+        fi
+
+        # Check for changes in the target directory (or current if no cd)
+        if [[ -n "$TARGET_DIR" && -d "$TARGET_DIR" ]]; then
+            CHANGES=$(cd "$TARGET_DIR" && git status --porcelain 2>/dev/null | wc -l | tr -d ' ')
+        else
+            CHANGES=$(git status --porcelain 2>/dev/null | wc -l | tr -d ' ')
+        fi
+
         if [[ "$CHANGES" -eq 0 ]]; then
             echo "HOOK_BLOCKED: No changes to commit. Stage files with 'git add' first." | tee -a /tmp/claude-hook.log >&2
             exit 2

package/templates/scripts/cleanup-worktree.sh

@@ -68,11 +68,33 @@ git push origin --delete "$BRANCH_NAME" 2>/dev/null || true
 # Update main
 echo -e "${BLUE}📥 Updating main branch...${NC}"
 git checkout main
-git pull origin main
+git fetch origin main
+
+# Handle divergent branches gracefully
+if ! git merge-base --is-ancestor HEAD origin/main 2>/dev/null; then
+    # Local is behind or diverged - fast-forward or rebase
+    if git merge-base --is-ancestor origin/main HEAD 2>/dev/null; then
+        # Local is ahead - nothing to do
+        echo -e "${BLUE}   Local main is ahead of origin${NC}"
+    else
+        # Diverged or behind - try fast-forward first
+        if ! git pull --ff-only origin main 2>/dev/null; then
+            echo -e "${YELLOW}   Divergent branches detected, rebasing...${NC}"
+            git rebase origin/main
+        fi
+    fi
+else
+    git pull --ff-only origin main 2>/dev/null || true
+fi
 
 echo ""
 echo -e "${GREEN}✅ Cleanup complete!${NC}"
 echo ""
+
+# Reminder for new dependencies
+echo -e "${YELLOW}💡 Tip: If new dependencies were added, run: npm install${NC}"
+echo ""
+
 echo -e "${BLUE}🗂️  Remaining worktrees:${NC}"
 git worktree list
 echo ""

package/templates/skills/exec/SKILL.md

@@ -65,6 +65,24 @@ Invocation:
 - `/exec <freeform description>`:
   - Treat the text as a lightweight description + AC if no issue context is available.
 
+### 0. Pre-flight Check (After Context Restoration)
+
+**CRITICAL:** If continuing from a restored/summarized conversation, verify git state first:
+
+```bash
+# Check current state - are we in a worktree or main repo?
+pwd
+git log --oneline -3 --stat
+
+# Check for existing PRs or branches for this issue
+gh pr list --search "<issue-number>"
+git branch -a | grep -i "<issue-number>"
+```
+
+**Why this matters:** After context restoration, PRs may have merged, branches may have changed, or work may already be complete. Always verify before creating duplicate work.
+
+**If PR already merged:** The issue may be complete - verify and close if so.
+
 ### 1. Check Implementation Readiness
 
 **FIRST STEP:** Review the issue readiness and proceed with implementation.

package/templates/skills/fullsolve/SKILL.md

@@ -90,6 +90,32 @@ When invoked as `/fullsolve <issue-number>`, execute the complete issue resoluti
 /fullsolve 218 --max-iterations 5 # Override max fix iterations
 ```
 
+## Phase 0: Pre-flight Checks
+
+**CRITICAL after context restoration:** Before starting any work, verify the current git state to avoid duplicate work.
+
+### 0.1 Git State Verification
+
+```bash
+# Check current branch and recent commits
+git log --oneline -5 --stat
+
+# Check for any existing work on this issue
+git branch -a | grep -i "<issue-number>"
+gh pr list --search "<issue-number>"
+```
+
+**Why this matters:** After context restoration from a summarized conversation, the git state may have changed (PRs merged, rebases, etc.). Always verify what's already been done before creating files or making changes.
+
+### 0.2 Existing Work Detection
+
+Before creating any files, check if they already exist:
+- Look for test files: `ls -la src/**/*.test.ts`
+- Check recent commits for relevant changes
+- Verify PR status if one was mentioned in context
+
+**If work already exists:** Skip to the appropriate phase (e.g., if implementation is done, go to Phase 3 or 4).
+
 ## Phase 1: Planning (SPEC)
 
 Execute the planning phase inline (not as separate command):