seqera 1.3.0 → 1.4.0-dev.fdb5545

package/LICENSE

@@ -6,7 +6,7 @@ License text copyright (c) 2020 MariaDB Corporation Ab, All Rights Reserved.
 Parameters
 
 Licensor:             Seqera Labs, S.L.
-Licensed Work:        Seqera AI
+Licensed Work:        Co-Scientist
                       Copyright (c) 2024-2026 Seqera Labs, S.L.
 Additional Use Grant: None
 Change Date:          Four years from the date the Licensed Work is published.

package/README.md

@@ -1,10 +1,10 @@
-# Seqera AI CLI
+# Co-Scientist CLI
 
 AI-powered assistant for bioinformatics workflows and [Seqera Platform](https://seqera.io).
 
 ## Get started
 
-1. Install the Seqera AI CLI:
+1. Install the Co-Scientist CLI:
 
     ```bash
     npm install -g seqera
@@ -20,7 +20,7 @@ AI-powered assistant for bioinformatics workflows and [Seqera Platform](https://
 
     See [Authentication](https://docs.seqera.io/platform-cloud/seqera-ai/authentication) for a comprehensive authentication guide.
 
-3. Start Seqera AI:
+3. Start Co-Scientist:
 
     ```bash
     seqera ai
@@ -36,11 +36,11 @@ AI-powered assistant for bioinformatics workflows and [Seqera Platform](https://
 
 ## Use cases
 
-Seqera AI is an intelligent command-line assistant that helps you build, run, and manage bioinformatics workflows. The following sections describe several common use cases.
+Co-Scientist is an intelligent command-line assistant that helps you build, run, and manage bioinformatics workflows. The following sections describe several common use cases.
 
 ### Work with Nextflow
 
-Seqera AI helps you develop, debug, and understand Nextflow pipelines with AI-powered analysis and code generation.
+Co-Scientist helps you develop, debug, and understand Nextflow pipelines with AI-powered analysis and code generation.
 
 <details open>
 <summary><strong>Working with Nextflow</strong></summary>
@@ -87,7 +87,7 @@ Seqera AI helps you develop, debug, and understand Nextflow pipelines with AI-po
 
 ### Build containers with Wave
 
-Seqera AI can create containerized environments using Wave, without requiring you to write Dockerfiles.
+Co-Scientist can create containerized environments using Wave, without requiring you to write Dockerfiles.
 
 <details open>
 <summary><strong>Building containers with Wave</strong></summary>
@@ -137,7 +137,7 @@ seqera ai -a full
 
 ### Exit the assistant
 
-End your Seqera AI session when done.
+End your Co-Scientist session when done.
 
 <details open>
 <summary><strong>Exit the assistant</strong></summary>
@@ -153,7 +153,7 @@ End your Seqera AI session when done.
 
 ### Use slash commands
 
-Seqera AI includes built-in slash commands for common workflows.
+Co-Scientist includes built-in slash commands for common workflows.
 
 <details open>
 <summary><strong>Use slash commands</strong></summary>
@@ -183,7 +183,7 @@ Seqera AI includes built-in slash commands for common workflows.
 
 ### Work with data
 
-Seqera AI helps you manage data through Platform data links and access reference datasets.
+Co-Scientist helps you manage data through Platform data links and access reference datasets.
 
 <details open>
 <summary><strong>Working with data</strong></summary>
@@ -222,7 +222,7 @@ Seqera AI helps you manage data through Platform data links and access reference
 
 ### Work with local files
 
-Seqera AI can interact with files in your current working directory.
+Co-Scientist can interact with files in your current working directory.
 
 <details open>
 <summary><strong>Work with local files</strong></summary>
@@ -250,7 +250,7 @@ seqera ai
 
 ### Work with nf-core modules
 
-Seqera AI provides access to over 1,000 nf-core modules for common bioinformatics tasks.
+Co-Scientist provides access to over 1,000 nf-core modules for common bioinformatics tasks.
 
 <details open>
 <summary><strong>Working with nf-core modules</strong></summary>
@@ -317,5 +317,5 @@ Use Seqera Platform capabilities to run and manage workflows at scale with AI as
 - [Installation](https://docs.seqera.io/platform-cloud/seqera-ai/installation): Detailed installation instructions
 - [Authentication](https://docs.seqera.io/platform-cloud/seqera-ai/authentication): Log in, log out, and session management
 - [Command approval](https://docs.seqera.io/platform-cloud/seqera-ai/command-approval): Control which commands run automatically
-- [Use cases](https://docs.seqera.io/platform-cloud/seqera-ai/use-cases): Seqera AI CLI use cases
+- [Use cases](https://docs.seqera.io/platform-cloud/seqera-ai/use-cases): Co-Scientist CLI use cases
 - [Troubleshooting](https://docs.seqera.io/platform-cloud/troubleshooting_and_faqs/seqera-ai): Troubleshoot common errors

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "seqera",
-  "version": "1.3.0",
+  "version": "1.4.0-dev.fdb5545",
   "description": "AI-powered CLI for Seqera Platform - bioinformatics workflow management",
   "keywords": [
     "seqera",
@@ -21,9 +21,9 @@
     "LICENSE"
   ],
   "optionalDependencies": {
-    "@seqera/cli-darwin-arm64": "1.3.0",
-    "@seqera/cli-darwin-x64": "1.3.0",
-    "@seqera/cli-linux-x64": "1.3.0"
+    "@seqera/cli-darwin-arm64": "1.4.0-dev.fdb5545",
+    "@seqera/cli-darwin-x64": "1.4.0-dev.fdb5545",
+    "@seqera/cli-linux-x64": "1.4.0-dev.fdb5545"
   },
   "engines": {
     "node": ">=18"