sensemaking 0.6.0 → 0.7.0

package/dist/esm/config.js.map

@@ -1 +1 @@
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package/dist/esm/db.d.ts

@@ -1,7 +1,7 @@
 import { DatabaseSync } from 'node:sqlite';
 import type { Config, ResolvedConfig } from './config.js';
 export declare const DB_FILENAME = "cache.db";
-export declare const SCHEMA_VERSION = "3";
+export declare const SCHEMA_VERSION = "4";
 export interface OpenResult {
     db: DatabaseSync;
     cfg: ResolvedConfig;

package/dist/esm/db.js

@@ -8,7 +8,7 @@ import { listFiles, parseFile } from './scan.js';
 // everything beyond frontmatter + content lives in src/features/.
 export const DB_FILENAME = 'cache.db';
 // Cache shape version, independent of the config's own `version`.
-export const SCHEMA_VERSION = '3';
+export const SCHEMA_VERSION = '4'; // 4: frontmatter scalars store as INTEGER/REAL/TEXT by YAML type (was: all numbers REAL)
 function quoteIdent(name) {
     return `"${name.split('"').join('""')}"`;
 }

package/dist/esm/db.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/db.ts"],"sourcesContent":["import { mkdirSync, rmSync } from 'node:fs';\nimport { join } from 'node:path';\nimport { DatabaseSync } from 'node:sqlite';\nimport type { Config, ResolvedConfig } from './config.ts';\nimport { featureSignature, STATE_DIR } from './config.ts';\nimport { activeFeatures } from './features/index.ts';\nimport type { ParsedDoc } from './scan.ts';\nimport { listFiles, parseFile } from './scan.ts';\n\n// Rows -> SQLite: core schema, reconcile loop, has(). Parsing lives in scan.ts;\n// everything beyond frontmatter + content lives in src/features/.\n\nexport const DB_FILENAME = 'cache.db';\n// Cache shape version, independent of the config's own `version`.\nexport const SCHEMA_VERSION = '3';\n\nexport interface OpenResult {\n  db: DatabaseSync;\n  cfg: ResolvedConfig;\n  dbPath: string;\n  parsed: number;\n  warnings: string[];\n}\n\nfunction quoteIdent(name: string): string {\n  return `\"${name.split('\"').join('\"\"')}\"`;\n}\n\n// has(field, value): JSON-array field -> membership, string field -> substring, NULL -> false.\nfunction registerFunctions(db: DatabaseSync): void {\n  db.function('has', { deterministic: true, varargs: false }, (field: unknown, value: unknown): number => {\n    if (field === null || field === undefined) return 0;\n\n    const needle = String(value);\n\n    if (typeof field === 'string') {\n      if (field.startsWith('[')) {\n        try {\n          const parsed = JSON.parse(field);\n          if (Array.isArray(parsed)) {\n            return parsed.some((item) => String(item) === needle) ? 1 : 0;\n          }\n        } catch {}\n      }\n      return field.includes(needle) ? 1 : 0;\n    }\n\n    return String(field).includes(needle) ? 1 : 0;\n  });\n}\n\nfunction getColumns(db: DatabaseSync): Set<string> {\n  const rows = db.prepare('PRAGMA table_info(frontmatter)').all() as Array<{ name: string }>;\n  return new Set(rows.map((r) => r.name));\n}\n\n// Content is a separate table (not a column on frontmatter) so `SELECT * FROM frontmatter`\n// can't dump file text into context. 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delBody = db.prepare(`DELETE FROM content WHERE \"path\" = ?`);\n    if (vanished.length > 0) {\n      const del = db.prepare(`DELETE FROM frontmatter WHERE \"path\" = ?`);\n      for (const path of vanished) {\n        del.run(path);\n        delBody.run(path);\n        for (const feature of features) feature.remove?.(db, path);\n      }\n    }\n    if (parsedDocs.length > 0) {\n      const insert = db.prepare(insertSql);\n      const insertBody = db.prepare(`INSERT INTO content (title, summary, text, \"path\") VALUES (?, ?, ?, ?)`);\n      for (const doc of parsedDocs) {\n        const values = allColumns.map((col) => {\n          if (col === 'path') return doc.relPath;\n          if (col === '_mtime') return doc.mtimeMs;\n          if (col === '_size') return doc.size;\n          return doc.data[col] ?? null;\n        });\n        insert.run(...values);\n        // Delete-before-insert only for docs that have rows: an FTS5 DELETE by column\n        // cannot use an index and scans 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package/dist/esm/errors.d.ts

@@ -1,4 +1,4 @@
-export type SenseErrorCode = 'CONFIG_NOT_FOUND' | 'CONFIG_EXISTS' | 'CONFIG_INVALID' | 'CONFIG_VERSION_UNSUPPORTED' | 'WATCH_ACTIVE' | 'NOTE_NOT_FOUND' | 'NOTE_AMBIGUOUS' | 'EMBED_DISABLED' | 'EMBED_MODEL';
+export type SenseErrorCode = 'CONFIG_NOT_FOUND' | 'CONFIG_EXISTS' | 'CONFIG_INVALID' | 'CONFIG_VERSION_UNSUPPORTED' | 'WATCH_ACTIVE' | 'NOTE_NOT_FOUND' | 'NOTE_AMBIGUOUS' | 'EMBED_DISABLED' | 'EMBED_MODEL' | 'SEARCH_SYNTAX';
 export declare class SenseError extends Error {
     code: SenseErrorCode;
     constructor(code: SenseErrorCode, message: string);

package/dist/esm/errors.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/errors.ts"],"sourcesContent":["// Library code throws; only cli.ts prints and exits.\nexport type SenseErrorCode = 'CONFIG_NOT_FOUND' | 'CONFIG_EXISTS' | 'CONFIG_INVALID' | 'CONFIG_VERSION_UNSUPPORTED' | 'WATCH_ACTIVE' | 'NOTE_NOT_FOUND' | 'NOTE_AMBIGUOUS' | 'EMBED_DISABLED' | 'EMBED_MODEL';\n\nexport class SenseError extends Error {\n  code: SenseErrorCode;\n\n  constructor(code: SenseErrorCode, message: string) {\n    super(message);\n    this.name = 'SenseError';\n    this.code = code;\n  }\n}\n"],"names":["SenseError","Error","code","message","name"],"mappings":"AAAA,qDAAqD;AAGrD,OAAO,MAAMA,mBAAmBC;IAG9B,YAAYC,IAAoB,EAAEC,OAAe,CAAE;QACjD,KAAK,CAACA;QACN,IAAI,CAACC,IAAI,GAAG;QACZ,IAAI,CAACF,IAAI,GAAGA;IACd;AACF"}
+{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/errors.ts"],"sourcesContent":["// Library code throws; only cli.ts prints and exits.\nexport type SenseErrorCode = 'CONFIG_NOT_FOUND' | 'CONFIG_EXISTS' | 'CONFIG_INVALID' | 'CONFIG_VERSION_UNSUPPORTED' | 'WATCH_ACTIVE' | 'NOTE_NOT_FOUND' | 'NOTE_AMBIGUOUS' | 'EMBED_DISABLED' | 'EMBED_MODEL' | 'SEARCH_SYNTAX';\n\nexport class SenseError extends Error {\n  code: SenseErrorCode;\n\n  constructor(code: SenseErrorCode, message: string) {\n    super(message);\n    this.name = 'SenseError';\n    this.code = code;\n  }\n}\n"],"names":["SenseError","Error","code","message","name"],"mappings":"AAAA,qDAAqD;AAGrD,OAAO,MAAMA,mBAAmBC;IAG9B,YAAYC,IAAoB,EAAEC,OAAe,CAAE;QACjD,KAAK,CAACA;QACN,IAAI,CAACC,IAAI,GAAG;QACZ,IAAI,CAACF,IAAI,GAAGA;IACd;AACF"}

package/dist/esm/features/embed.d.ts

@@ -11,4 +11,5 @@ export declare function embedPending(db: DatabaseSync, cfg: Config, baseDir: str
 export declare function semanticCandidates(db: DatabaseSync, cfg: Config, terms: string, fetch: number): Promise<Array<{
     path: string;
     lines: string;
+    similarity: number;
 }>>;

package/dist/esm/features/embed.js

@@ -109,9 +109,12 @@ async function staticProvider(model) {
     const tok = new Tokenizer(tokenizerJson, {});
     const unkId = (_ref = (_tokenizerJson_model1 = tokenizerJson.model) === null || _tokenizerJson_model1 === void 0 ? void 0 : (_tokenizerJson_model_vocab = _tokenizerJson_model1.vocab) === null || _tokenizerJson_model_vocab === void 0 ? void 0 : _tokenizerJson_model_vocab[(_tokenizerJson_model = tokenizerJson.model) === null || _tokenizerJson_model === void 0 ? void 0 : _tokenizerJson_model.unk_token]) !== null && _ref !== void 0 ? _ref : -1;
     function one(text) {
+        // The tokenizer yields undefined (not the unk id) for tokens outside the vocab; an
+        // undefined id would index the matrix at NaN and poison the whole mean-pool -- and the
+        // int8 conversion then stores the NaN vector as all zeros, silently. Keep integers only.
         const ids = tok.encode(text, {
             add_special_tokens: false
-        }).ids.filter((id)=>id !== unkId);
+        }).ids.filter((id)=>Number.isInteger(id) && id !== unkId);
         const v = new Float32Array(dims);
         if (ids.length === 0) return v;
         for (const id of ids){
@@ -252,6 +255,11 @@ export async function embedPending(db, cfg, baseDir) {
 // Top candidates by cosine for a semantic find: best chunk per file, its line range
 // riding along. FTS5 operators in the terms are lexical syntax, not meaning -- stripped
 // before embedding.
+// Returns the cosine similarity alongside each candidate: stored and query vectors are both
+// L2-normalised before quantisation, so the dot product is cosine in [-1, 1]. `find` surfaces
+// it because the fused rank score cannot express match quality -- nearest-neighbour search
+// always returns a nearest neighbour, so without a magnitude an agent cannot tell a real hit
+// from the best of a bad lot.
 export async function semanticCandidates(db, cfg, terms, fetch1) {
     var _terms_match;
     const baseDir = cfg.baseDir;
@@ -285,6 +293,7 @@ export async function semanticCandidates(db, cfg, terms, fetch1) {
         ...best.entries()
     ].sort((a, b)=>b[1].score - a[1].score).slice(0, fetch1).map(([path, b])=>({
             path,
-            lines: b.lines
+            lines: b.lines,
+            similarity: Math.round(b.score * 1000) / 1000
         }));
 }

package/dist/esm/features/embed.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/features/embed.ts"],"sourcesContent":["import { existsSync, mkdirSync, readFileSync, renameSync, writeFileSync } from 'node:fs';\nimport { homedir } from 'node:os';\nimport { join } from 'node:path';\nimport type { DatabaseSync } from 'node:sqlite';\nimport type { Config, ResolvedConfig } from '../config.ts';\nimport { embedConfig } from '../config.ts';\nimport { SenseError } from '../errors.ts';\nimport { parseFile } from '../scan.ts';\nimport type { Feature } from './types.ts';\n\n// embeddings(path, chunk, start_line, end_line, scale, vector): heading-based chunks,\n// int8 vectors with a per-vector dequantization scale, vector NULL = not yet embedded.\n// Reconcile stores dirty rows inside its transaction; embedding tops up on the next\n// semantic query (embedPending), so staleness costs recall, never correctness.\n\n// Storage lever fixed by the bake-off (BENCHMARKING.md): int8 at 256 dims is\n// quality-free vs f32-512 when fused. Queries stay f32 at the same dims.\nconst STORE_DIMS = 256;\nconst BATCH = 64;\n\nexport interface EmbedProvider {\n  id: string; // model identity; participates in the cache key, change -> re-embed\n  dims: number;\n  embed(texts: string[]): Promise<Float32Array[]>;\n}\n\ninterface Chunk {\n  startLine: number;\n  endLine: number;\n  text: string;\n}\n\n// Deterministic chunker used at reconcile (line ranges stored) and at embed time (text\n// re-derived from the file -- chunk text is never stored). Heading-delimited with the\n// preamble kept; whole file when no headings. The title/summary prefix mirrors the\n// bm25 column weighting.\nfunction chunksOf(raw: string, search?: { title: string; summary: string }): Chunk[] {\n  const lines = raw.split('\\n');\n  const starts: number[] = [];\n  let inFence = false;\n  for (let i = 0; i < lines.length; i++) {\n    if (/^(```|~~~)/.test(lines[i])) {\n      inFence = !inFence;\n      continue;\n    }\n    if (!inFence && /^#{1,6} +/.test(lines[i])) starts.push(i + 1);\n  }\n  const bounds = starts.length === 0 ? [1] : starts[0] > 1 ? [1, ...starts] : starts;\n  const prefix = [search?.title, search?.summary].filter(Boolean).join('\\n');\n  const chunks: Chunk[] = [];\n  bounds.forEach((start, i) => {\n    const end = i + 1 < bounds.length ? bounds[i + 1] - 1 : lines.length;\n    const text = lines\n      .slice(start - 1, end)\n      .join('\\n')\n      .trim();\n    if (text.length > 0) chunks.push({ startLine: start, endLine: end, text: prefix ? `${prefix}\\n${text}` : text });\n  });\n  return chunks;\n}\n\nexport const embed: Feature = {\n  name: 'embed',\n  schema(db) {\n    db.exec(`CREATE TABLE IF NOT EXISTS embeddings (\"path\" TEXT, chunk INTEGER, start_line INTEGER, end_line INTEGER, scale REAL, vector BLOB, PRIMARY KEY (\"path\", chunk))`);\n  },\n  extract(raw, _body, search) {\n    return chunksOf(raw, search);\n  },\n  remove(db, path) {\n    db.prepare('DELETE FROM embeddings WHERE \"path\" = ?').run(path);\n  },\n  store(db, path, extracted) {\n    const insert = db.prepare('INSERT INTO embeddings (\"path\", chunk, start_line, end_line, scale, vector) VALUES (?, ?, ?, ?, NULL, NULL)');\n    (extracted as Chunk[]).forEach((c, idx) => insert.run(path, idx, c.startLine, c.endLine));\n  },\n};\n\n// --- static type: Model2Vec safetensors + pure-JS tokenizer, model cached in ~/.cache ---\n// Encode convention from model2vec/model.py: no special tokens, drop unk ids, mean-pool,\n// L2-normalize.\n\nfunction fetchToFile(url: string, dest: string): Promise<void> {\n  return fetch(url).then(async (res) => {\n    if (!res.ok) throw new SenseError('EMBED_MODEL', `model download failed: ${url} -> HTTP ${res.status}`);\n    writeFileSync(`${dest}.part`, Buffer.from(await res.arrayBuffer()));\n    renameSync(`${dest}.part`, dest);\n  });\n}\n\nasync function staticProvider(model: string): Promise<EmbedProvider> {\n  let dir = model;\n  if (!existsSync(join(dir, 'model.safetensors'))) {\n    dir = join(homedir(), '.cache', 'sensemaking', 'models', model.replace(/\\//g, '--'));\n    mkdirSync(dir, { recursive: true });\n    for (const file of ['model.safetensors', 'tokenizer.json']) {\n      if (!existsSync(join(dir, file))) {\n        console.error(`fetching ${model}/${file} into ${dir} (once; delete to refetch)`);\n        await fetchToFile(`https://huggingface.co/${model}/resolve/main/${file}`, join(dir, file));\n      }\n    }\n  }\n\n  const raw = readFileSync(join(dir, 'model.safetensors'));\n  const headerLen = Number(raw.readBigUInt64LE(0));\n  const header = JSON.parse(raw.subarray(8, 8 + headerLen).toString('utf8')) as Record<string, { dtype: string; shape: number[]; data_offsets: number[] }>;\n  const entry = Object.entries(header).find(([k]) => k !== '__metadata__');\n  if (!entry || entry[1].dtype !== 'F32') throw new SenseError('EMBED_MODEL', `${model}: expected an F32 safetensors matrix`);\n  const spec = entry[1];\n  const dims = spec.shape[1];\n  const dataStart = raw.byteOffset + 8 + headerLen + spec.data_offsets[0];\n  const matrix = dataStart % 4 === 0 ? new Float32Array(raw.buffer, dataStart, spec.shape[0] * dims) : new Float32Array(raw.buffer.slice(dataStart, dataStart + spec.shape[0] * dims * 4));\n\n  const tokenizerJson = JSON.parse(readFileSync(join(dir, 'tokenizer.json'), 'utf8'));\n  // Lazy import: the tokenizer loads only on the semantic path, never at CLI startup.\n  const { Tokenizer } = await import('@huggingface/tokenizers');\n  const tok = new Tokenizer(tokenizerJson, {});\n  const unkId = tokenizerJson.model?.vocab?.[tokenizerJson.model?.unk_token] ?? -1;\n\n  function one(text: string): Float32Array {\n    const ids = (tok.encode(text, { add_special_tokens: false }).ids as number[]).filter((id) => id !== unkId);\n    const v = new Float32Array(dims);\n    if (ids.length === 0) return v;\n    for (const id of ids) {\n      const off = id * dims;\n      for (let d = 0; d < dims; d++) v[d] += matrix[off + d];\n    }\n    let norm = 0;\n    for (let d = 0; d < dims; d++) {\n      v[d] /= ids.length;\n      norm += v[d] * v[d];\n    }\n    norm = Math.sqrt(norm) + 1e-32;\n    for (let d = 0; d < dims; d++) v[d] /= norm;\n    return v;\n  }\n\n  return { id: `static:${model}`, dims, embed: async (texts) => texts.map(one) };\n}\n\n// --- api type: one POST against any OpenAI-compatible /embeddings endpoint ---\n\nasync function apiProvider(model: string, url: string | undefined, keyEnv: string | undefined): Promise<EmbedProvider> {\n  if (!url) throw new SenseError('EMBED_MODEL', 'features.embed.type \"api\" requires a url');\n  const base = url.replace(/\\/+$/, '');\n  const headers: Record<string, string> = { 'content-type': 'application/json' };\n  const key = keyEnv ? 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[1, ...starts] : starts;\n  const prefix = [search?.title, search?.summary].filter(Boolean).join('\\n');\n  const chunks: Chunk[] = [];\n  bounds.forEach((start, i) => {\n    const end = i + 1 < bounds.length ? bounds[i + 1] - 1 : lines.length;\n    const text = lines\n      .slice(start - 1, end)\n      .join('\\n')\n      .trim();\n    if (text.length > 0) chunks.push({ startLine: start, endLine: end, text: prefix ? `${prefix}\\n${text}` : text });\n  });\n  return chunks;\n}\n\nexport const embed: Feature = {\n  name: 'embed',\n  schema(db) {\n    db.exec(`CREATE TABLE IF NOT EXISTS embeddings (\"path\" TEXT, chunk INTEGER, start_line INTEGER, end_line INTEGER, scale REAL, vector BLOB, PRIMARY KEY (\"path\", chunk))`);\n  },\n  extract(raw, _body, search) {\n    return chunksOf(raw, search);\n  },\n  remove(db, path) {\n    db.prepare('DELETE FROM embeddings WHERE \"path\" = ?').run(path);\n  },\n  store(db, path, extracted) {\n    const insert = db.prepare('INSERT INTO embeddings (\"path\", chunk, start_line, end_line, scale, vector) VALUES (?, ?, ?, ?, NULL, NULL)');\n    (extracted as Chunk[]).forEach((c, idx) => insert.run(path, idx, c.startLine, c.endLine));\n  },\n};\n\n// --- static type: Model2Vec safetensors + pure-JS tokenizer, model cached in ~/.cache ---\n// Encode convention from model2vec/model.py: no special tokens, drop unk ids, mean-pool,\n// L2-normalize.\n\nfunction fetchToFile(url: string, dest: string): Promise<void> {\n  return fetch(url).then(async (res) => {\n    if (!res.ok) throw new SenseError('EMBED_MODEL', `model download failed: ${url} -> HTTP ${res.status}`);\n    writeFileSync(`${dest}.part`, Buffer.from(await res.arrayBuffer()));\n    renameSync(`${dest}.part`, dest);\n  });\n}\n\nasync function staticProvider(model: string): Promise<EmbedProvider> {\n  let dir = model;\n  if (!existsSync(join(dir, 'model.safetensors'))) {\n    dir = join(homedir(), '.cache', 'sensemaking', 'models', model.replace(/\\//g, '--'));\n    mkdirSync(dir, { recursive: true });\n    for (const file of ['model.safetensors', 'tokenizer.json']) {\n      if (!existsSync(join(dir, file))) {\n        console.error(`fetching ${model}/${file} into ${dir} (once; delete to refetch)`);\n        await fetchToFile(`https://huggingface.co/${model}/resolve/main/${file}`, join(dir, file));\n      }\n    }\n  }\n\n  const raw = readFileSync(join(dir, 'model.safetensors'));\n  const headerLen = Number(raw.readBigUInt64LE(0));\n  const header = JSON.parse(raw.subarray(8, 8 + headerLen).toString('utf8')) as Record<string, { dtype: string; shape: number[]; data_offsets: number[] }>;\n  const entry = Object.entries(header).find(([k]) => k !== '__metadata__');\n  if (!entry || entry[1].dtype !== 'F32') throw new SenseError('EMBED_MODEL', `${model}: expected an F32 safetensors matrix`);\n  const spec = entry[1];\n  const dims = spec.shape[1];\n  const dataStart = raw.byteOffset + 8 + headerLen + spec.data_offsets[0];\n  const matrix = dataStart % 4 === 0 ? new Float32Array(raw.buffer, dataStart, spec.shape[0] * dims) : new Float32Array(raw.buffer.slice(dataStart, dataStart + spec.shape[0] * dims * 4));\n\n  const tokenizerJson = JSON.parse(readFileSync(join(dir, 'tokenizer.json'), 'utf8'));\n  // Lazy import: the tokenizer loads only on the semantic path, never at CLI startup.\n  const { Tokenizer } = await import('@huggingface/tokenizers');\n  const tok = new Tokenizer(tokenizerJson, {});\n  const unkId = tokenizerJson.model?.vocab?.[tokenizerJson.model?.unk_token] ?? -1;\n\n  function one(text: string): Float32Array {\n    // The tokenizer yields undefined (not the unk id) for tokens outside the vocab; an\n    // undefined id would index the matrix at NaN and poison the whole mean-pool -- and the\n    // int8 conversion then stores the NaN vector as all zeros, silently. Keep integers only.\n    const ids = (tok.encode(text, { add_special_tokens: false }).ids as number[]).filter((id) => Number.isInteger(id) && id !== unkId);\n    const v = new Float32Array(dims);\n    if (ids.length === 0) return v;\n    for (const id of ids) {\n      const off = id * dims;\n      for (let d = 0; d < dims; d++) v[d] += matrix[off + d];\n    }\n    let norm = 0;\n    for (let d = 0; d < dims; d++) {\n      v[d] /= ids.length;\n      norm += v[d] * v[d];\n    }\n    norm = Math.sqrt(norm) + 1e-32;\n    for (let d = 0; d < dims; d++) v[d] /= norm;\n    return v;\n  }\n\n  return { id: `static:${model}`, dims, embed: async (texts) => texts.map(one) };\n}\n\n// --- api type: one POST against any OpenAI-compatible /embeddings endpoint ---\n\nasync function apiProvider(model: string, url: string | undefined, keyEnv: string | undefined): Promise<EmbedProvider> {\n  if (!url) throw new SenseError('EMBED_MODEL', 'features.embed.type \"api\" requires a url');\n  const base = url.replace(/\\/+$/, '');\n  const headers: Record<string, string> = { 'content-type': 'application/json' };\n  const key = keyEnv ? process.env[keyEnv] : undefined;\n  if (key) headers.authorization = `Bearer ${key}`;\n\n  async function post(texts: string[]): Promise<Float32Array[]> {\n    const res = await fetch(`${base}/embeddings`, { method: 'POST', headers, body: JSON.stringify({ model, input: texts }) });\n    if (!res.ok) throw new SenseError('EMBED_MODEL', `${base}/embeddings -> HTTP ${res.status}`);\n    const body = (await res.json()) as { data: Array<{ embedding: number[] }> };\n    return body.data.map((d) => Float32Array.from(d.embedding));\n  }\n\n  const dims = (await post(['dimension probe']))[0].length;\n  return { id: `api:${base}:${model}`, dims, embed: post };\n}\n\nconst providers = new Map<string, Promise<EmbedProvider>>();\n\nfunction getProvider(cfg: Config): Promise<EmbedProvider> {\n  const e = embedConfig(cfg);\n  if (!e) throw new SenseError('EMBED_DISABLED', 'semantic expansion needs features.embed in sense.config.json (e.g. \"features\": { \"embed\": true })');\n  const sig = `${e.type}:${e.model}:${e.url ?? ''}`;\n  let p = providers.get(sig);\n  if (!p) {\n    p = e.type === 'api' ? apiProvider(e.model, e.url, e.key) : staticProvider(e.model);\n    providers.set(sig, p);\n  }\n  return p;\n}\n\n// Slice + re-normalize (Matryoshka); optionally round through int8 storage.\nfunction toStore(full: Float32Array, dims: number, int8: boolean): { v: Float32Array; scale: number } {\n  const v = new Float32Array(dims);\n  let norm = 0;\n  for (let d = 0; d < dims; d++) norm += full[d] * full[d];\n  norm = Math.sqrt(norm) + 1e-32;\n  for (let d = 0; d < dims; d++) v[d] = full[d] / norm;\n  if (!int8) return { v, scale: 1 };\n  let max = 0;\n  for (let d = 0; d < dims; d++) max = Math.max(max, Math.abs(v[d]));\n  return { v, scale: max / 127 || 1 };\n}\n\n// Embed rows whose vector is NULL, re-deriving chunk text from the files through the\n// same parse + chunker that stored the rows.\nexport async function embedPending(db: DatabaseSync, cfg: Config, baseDir: string): Promise<void> {\n  const provider = await getProvider(cfg); // throws EMBED_DISABLED before touching the table\n  const dirty = db.prepare('SELECT \"path\", chunk FROM embeddings WHERE vector IS NULL ORDER BY \"path\", chunk').all() as Array<{ path: string; chunk: number }>;\n  if (dirty.length === 0) return;\n  const storeDims = Math.min(STORE_DIMS, provider.dims);\n\n  const byPath = new Map<string, number[]>();\n  for (const row of dirty) {\n    const list = byPath.get(row.path) ?? [];\n    list.push(row.chunk);\n    byPath.set(row.path, list);\n  }\n\n  const jobs: Array<{ path: string; chunk: number; text: string }> = [];\n  for (const [path, chunkIdxs] of byPath) {\n    let chunks: Chunk[];\n    try {\n      chunks = parseFile({ relPath: path, absPath: join(baseDir, path), mtimeMs: 0, size: 0 }, [embed]).doc.extracted.embed as Chunk[];\n    } catch {\n      continue; // vanished since reconcile; the next reconcile removes its rows\n    }\n    for (const idx of chunkIdxs) if (chunks[idx]) jobs.push({ path, chunk: idx, text: chunks[idx].text });\n  }\n\n  const update = db.prepare('UPDATE embeddings SET scale = ?, vector = ? WHERE \"path\" = ? AND chunk = ?');\n  for (let i = 0; i < jobs.length; i += BATCH) {\n    const batch = jobs.slice(i, i + BATCH);\n    const vectors = await provider.embed(batch.map((j) => j.text));\n    db.exec('BEGIN');\n    try {\n      batch.forEach((job, j) => {\n        const { v, scale } = toStore(vectors[j], storeDims, true);\n        const q = new Int8Array(storeDims);\n        for (let d = 0; d < storeDims; d++) q[d] = Math.round(v[d] / scale);\n        update.run(scale, Buffer.from(q.buffer), job.path, job.chunk);\n      });\n      db.exec('COMMIT');\n    } catch (err) {\n      db.exec('ROLLBACK');\n      throw err;\n    }\n  }\n}\n\n// Top candidates by cosine for a semantic find: best chunk per file, its line range\n// riding along. 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package/dist/esm/output.js

@@ -6,19 +6,41 @@ function cell(value) {
     return String(value !== null && value !== void 0 ? value : '').replace(/\s*\n\s*/g, ' ');
 }
 export function printRows(rows, format) {
-    const rendered = render(rows, format);
+    const rendered = renderRows(rows, format);
     console.log(rendered);
     if (rendered.length > OVERSIZE_BYTES) {
         console.warn(`warning: result is ${Math.round(rendered.length / 1000)} KB across ${rows.length} row(s); consider a LIMIT, fewer columns, or snippet() instead of whole values`);
     }
 }
-function render(rows, format) {
+// Table output is for reading; a row wider than the terminal wraps into an unreadable
+// block (a `find` header measured 330 chars once `summary` is present, which drove one
+// user to pipe --format json through a script for every interactive query). Widest
+// columns give up space first, down to a floor, and only as far as the terminal needs.
+// --format json is never truncated: it is the machine-readable surface.
+const MIN_COLUMN = 12;
+const TRUNCATED = '…';
+function fitWidths(widths, limit) {
+    const gaps = (widths.length - 1) * 2;
+    const fitted = [
+        ...widths
+    ];
+    for(;;){
+        const total = fitted.reduce((a, b)=>a + b, 0) + gaps;
+        if (total <= limit) return fitted;
+        const widest = fitted.indexOf(Math.max(...fitted));
+        if (fitted[widest] <= MIN_COLUMN) return fitted;
+        fitted[widest] = Math.max(MIN_COLUMN, fitted[widest] - Math.max(1, total - limit));
+    }
+}
+function renderRows(rows, format, width = process.stdout.columns) {
     if (format === 'json') return JSON.stringify(rows, null, 2);
     if (rows.length === 0) return '(0 rows)';
     const columns = Object.keys(rows[0]);
     const cells = rows.map((row)=>columns.map((col)=>cell(row[col])));
-    const widths = columns.map((col, i)=>Math.max(col.length, ...cells.map((row)=>row[i].length)));
-    const formatRow = (values)=>values.map((value, i)=>value.padEnd(widths[i])).join('  ');
+    const natural = columns.map((col, i)=>Math.max(col.length, ...cells.map((row)=>row[i].length)));
+    const widths = width && width > MIN_COLUMN ? fitWidths(natural, width) : natural;
+    const clip = (value, w)=>value.length <= w ? value.padEnd(w) : `${value.slice(0, w - 1)}${TRUNCATED}`;
+    const formatRow = (values)=>values.map((value, i)=>clip(value, widths[i])).join('  ').trimEnd();
     return [
         formatRow(columns),
         widths.map((w)=>'-'.repeat(w)).join('  '),
@@ -34,12 +56,12 @@ export function renderMap(result) {
     const parts = [
         `docs: ${result.docs.count} (${Math.round(result.docs.bytes / 1024)} KB)`,
         `${featuresLine(result.features)}\n`,
-        render(result.fields, 'table')
+        renderRows(result.fields, 'table')
     ];
     if (result.fieldsTotal > result.fields.length) parts.push(`(+${result.fieldsTotal - result.fields.length} more fields)`);
-    if (result.hubs.length > 0) parts.push('\nhubs (by link rank):', render(result.hubs, 'table'));
+    if (result.hubs.length > 0) parts.push('\nhubs (by link rank):', renderRows(result.hubs, 'table'));
     else if (result.features.off.includes('rank')) parts.push('\nhubs: off (features.rank)');
-    parts.push('\nrecent:', render(result.recent, 'table'));
+    parts.push('\nrecent:', renderRows(result.recent, 'table'));
     return parts.join('\n');
 }
 export function renderPeek(result) {

package/dist/esm/output.js.map

@@ -1 +1 @@
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package/dist/esm/scan.d.ts

@@ -11,7 +11,7 @@ export interface ParsedDoc {
     relPath: string;
     mtimeMs: number;
     size: number;
-    data: Record<string, string | number | null>;
+    data: Record<string, string | number | bigint | null>;
     search: {
         title: string;
         summary: string;

package/dist/esm/scan.js

@@ -41,10 +41,16 @@ export function listFiles(cfg, baseDir) {
         };
     });
 }
+// SQLite storage classes follow the YAML scalar: strings -> TEXT, booleans and whole
+// numbers -> INTEGER, fractions -> REAL, everything else (lists, maps) -> JSON TEXT.
+// Booleans have no SQLite type of their own; 1/0 is the convention, so `WHERE flag = 1`
+// matches and `WHERE flag = 'true'` cannot -- `map` prints the observed type per field so
+// that mismatch is visible rather than a silent zero-row answer.
 function mapValue(value) {
     if (value === null || value === undefined) return null;
-    if (typeof value === 'boolean') return value ? 1 : 0;
-    if (typeof value === 'string' || typeof value === 'number') return value;
+    if (typeof value === 'boolean') return BigInt(value ? 1 : 0);
+    if (typeof value === 'number') return Number.isSafeInteger(value) ? BigInt(value) : value;
+    if (typeof value === 'string') return value;
     return JSON.stringify(value);
 }
 // The delimiter split is all this package used gray-matter for.

package/dist/esm/scan.js.map

@@ -1 +1 @@
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Pure data in, data + warnings out; db.ts does the SQL.\n\n// Reserved: colliding with these would clash with the `frontmatter` table's own columns or the other tables (`content`, `links`, `sections`).\nconst RESERVED_COLUMNS = new Set(['path', '_mtime', '_size', '_rank', 'content', 'links', 'sections']);\n\nfunction normalizeText(value: unknown): string {\n  if (value === null || value === undefined) return '';\n  return String(value).replace(/\\s+/g, ' ').trim();\n}\n\n// Markdown is stripped at index time so snippets read as clean prose (also improves matching, e.g. `**bold**` indexes as `bold`).\n// remove-markdown doesn't cover Obsidian wikilinks or table scaffolding, so those are handled first/after.\nfunction stripText(value: string): string {\n  const withoutWikilinks = value.replace(/\\[\\[([^\\]|]+)\\|([^\\]]+)\\]\\]/g, '$2').replace(/\\[\\[([^\\]]+)\\]\\]/g, '$1');\n  const withoutMarkdown = removeMarkdown(withoutWikilinks);\n  const withoutTables = withoutMarkdown.replace(/^\\s*\\|?[-\\s|:]+\\|\\s*$/gm, '').replace(/\\|/g, ' ');\n  return normalizeText(withoutTables);\n}\n\nexport interface FileStat {\n  relPath: string;\n  absPath: string;\n  mtimeMs: number;\n  size: number;\n}\n\nexport function listFiles(cfg: Config, baseDir: string): FileStat[] {\n  const relPaths = fastGlob.sync(cfg.scan.include, { cwd: baseDir }).sort();\n  return relPaths.map((relPath) => {\n    const absPath = join(baseDir, relPath);\n    const st = statSync(absPath);\n    return { relPath, absPath, mtimeMs: st.mtimeMs, size: st.size };\n  });\n}\n\nexport interface ParsedDoc {\n  relPath: string;\n  mtimeMs: number;\n  size: number;\n  data: Record<string, string | number | null>;\n  // title/summary are duplicated from frontmatter so bm25() can weight them above the body text.\n  search: { title: string; summary: string; text: string };\n  // Per-feature extraction results, keyed by feature name; features store them at reconcile.\n  extracted: Record<string, unknown>;\n}\n\nfunction mapValue(value: unknown): string | number | null {\n  if (value === null || value === undefined) return null;\n  if (typeof value === 'boolean') return value ? 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