sensemaking 0.19.0 → 0.19.1

package/dist/esm/store/turso/open.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/store/turso/open.ts"],"sourcesContent":["import { mkdirSync } from 'node:fs';\nimport { join } from 'node:path';\nimport type { Database } from '@tursodatabase/database';\nimport type { Config, ResolvedConfig } from '../../config/index.ts';\nimport { featureSignature, STATE_DIR } from '../../config/index.ts';\nimport { rekeyChunkText } from '../../embed/handoff.ts';\nimport { STORE_DIMS } from '../../embed/types.ts';\nimport { SenseError } from '../../errors.ts';\nimport { activeFeatures, FEATURES } from '../../features/index.ts';\nimport { clearCache } from '../cache.ts';\nimport { getMeta, setMeta } from '../shared.ts';\nimport type { Connection, Store } from '../types.ts';\nimport { createConnection } from './connection.ts';\nimport { TURSO_PACKAGE, tursoApi } from './native.ts';\nimport { reconcile } from './reconcile.ts';\nimport { createStore } from './store.ts';\n\nexport const DB_FILENAME = 'cache.turso.db';\n// Independent of sqlite's and duckdb's SCHEMA_VERSION: each store's cache shape evolves\n// separately. 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Installed on first use if missing.\n  let turso: Awaited<ReturnType<typeof tursoApi>>;\n  try {\n    turso = await tursoApi();\n  } catch (err) {\n    if (err instanceof SenseError) throw err;\n    throw new SenseError('STORE_DEPENDENCY_MISSING', `store \"turso\" needs the ${TURSO_PACKAGE} package (${(err as Error).message})`);\n  }\n\n  let db: Database;\n  try {\n    // Floored at the same 30s sqlite opens with. `timeout` is connect-time only in this client;\n    // the derived value is set via runtime PRAGMA below. `index_method` is required for ensureSchema()'s FTS indexes (T1).\n    db = await turso.connect(dbPath, { timeout: 30_000, experimental: ['index_method'] });\n  } catch (err) {\n    throw new SenseError('STORE_DEPENDENCY_MISSING', `store \"turso\" failed to open ${dbPath}: ${(err as Error).message}`);\n  }\n  // A throw below must release this handle, or the leaked WAL makes the db file undeletable on\n  // Windows. closed guards the catch against double-closing.\n  let closed = false;\n  try {\n    const conn = createConnection(db);\n\n    await conn.exec('CREATE TABLE IF NOT EXISTS meta (key TEXT PRIMARY KEY, value TEXT)');\n\n    const version = await getMeta(conn, 'schema_version');\n    const features = await getMeta(conn, 'features');\n    const wantFeatures = featureSignature(cfg, FEATURES);\n    if ((version !== null && version !== SCHEMA_VERSION) || (features !== null && features !== wantFeatures)) {\n      // Reconcile only reparses changed files, so a stale cache is rebuilt rather than patched\n      // incrementally. No tokenize-only or embed-identity-adopted partial path: any mismatch rebuilds.\n      const reason = version !== null && version !== SCHEMA_VERSION ? 'cache format changed (new sensemaking version)' : 'config change (features, tokenizer, or presets)';\n      console.error(`sense: ${reason}; rebuilding the index`);\n      closed = true;\n      await db.close();\n      clearCache(cfg);\n      return connect(cfg);\n    }\n\n    await ensureSchema(conn, cfg);\n\n    // 3x the largest reconcile this cache has recorded, floored at 30s and capped at 10min.\n    // Installed before reconcile() -- that call is the one that races a watcher's transaction.\n    const recordedMaxMs = Number((await getMeta(conn, 'reconcile_max_ms')) ?? 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package/dist/esm/store/turso/reconcile.js

@@ -5,7 +5,8 @@ import { listFiles, RESERVED_COLUMNS } from '../../scan/index.js';
 import { reparseFiles } from '../../scan/reparse.js';
 import { hasUnspacedRun } from '../../text/segment.js';
 import { getColumns, getMeta, quoteIdent, setMeta } from '../shared.js';
-import { withTransaction } from '../transaction.js';
+import { BEGIN_WRITE, withTransaction } from '../transaction.js';
+import { CONTENT_FTS_DDL, CONTENT_FTS_NAMES } from './open.js';
 // Fork of sqlite/reconcile.ts, not duckdb's, so this store keeps reconcile_max_ms bookkeeping
 // (open.ts's busy timeout derives from it). content is a plain table with "_ngram" sidecars for lexical.ts.
 const CORE_FRONTMATTER_COLUMNS = new Set([
@@ -23,6 +24,8 @@ function ngramSidecar(text) {
 // Not a compile-time cap on ALTER TABLE ADD COLUMN (spike-measured: turso accepts 10,000 with
 // no error); the real fence is a SELECT projecting more than this many result columns, which fails to prepare.
 const MAX_FRONTMATTER_COLUMNS = 2000;
+// Changed files above which rebuilding the FTS index beats maintaining it per row (see reconcile).
+const FTS_REBUILD_THRESHOLD = 250;
 // No rowid coupling (unlike sqlite's FTS5 content): `path` is content's own primary key.
 const INSERT_CONTENT_SQL = `INSERT INTO content ("path", title, summary, text, title_ngram, summary_ngram, text_ngram) VALUES (?, ?, ?, ?, ?, ?, ?)`;
 function contentRow(doc) {
@@ -100,6 +103,16 @@ export async function reconcile(conn, cfg, baseDir) {
                 }));
             await conn.runBatch(insertSql, rows);
         }
+        // Tantivy maintains the FTS index per inserted row and the cost grows with the batch, so a
+        // large insert is superlinear: 6,566 notes took 945s with the index live, 3.3s built after.
+        // Measured crossover against a full rebuild, in changed files: ~250 on a 6,566-note tree
+        // (100 -> 895ms, 300 -> 4.1s, 1,300 -> 45.5s, rebuild 3.35s), ~295 on 13,132 (250 -> 5.2s,
+        // 400 -> 10.0s, rebuild 6.7s). Doubling the corpus moved it 250 to 295, so a constant fits
+        // where a ratio does not: 20% would allow 1,313 files here, costing 45s to save 3.3s.
+        // Erring low is the cheap direction, since a needless rebuild is linear and predictable.
+        const churn = delta.reparsed.length + delta.vanished.length;
+        const bulk = delta.files.length === 0 || churn > FTS_REBUILD_THRESHOLD;
+        if (bulk) for (const name of CONTENT_FTS_NAMES)await conn.exec(`DROP INDEX IF EXISTS ${name}`);
         // content is a plain table keyed by its own path (no rowid subquery, unlike sqlite's FTS5
         // content), so vanished and reparsed docs delete in one pass.
         const contentTouched = [
@@ -110,6 +123,7 @@ export async function reconcile(conn, cfg, baseDir) {
                 p
             ]));
         if (parsedDocs.length > 0) await conn.runBatch(INSERT_CONTENT_SQL, parsedDocs.map(contentRow));
+        if (bulk) for (const ddl of CONTENT_FTS_DDL)await conn.exec(ddl);
         if (vanished.length > 0) await conn.runBatch('DELETE FROM frontmatter WHERE "path" = ?', vanished.map((p)=>[
                 p
             ]));
@@ -142,7 +156,7 @@ export async function reconcile(conn, cfg, baseDir) {
             await ((_feature_store = feature.store) === null || _feature_store === void 0 ? void 0 : _feature_store.call(feature, conn, docsForFeature, delta));
         }
         for (const feature of features)await ((_feature_afterReconcile = feature.afterReconcile) === null || _feature_afterReconcile === void 0 ? void 0 : _feature_afterReconcile.call(feature, conn, delta));
-    });
+    }, BEGIN_WRITE);
     // Reconcile's own write-transaction duration, for open()'s derived busy_timeout: the observed
     // max is what the next open bounds its wait against.
     const durationMs = Date.now() - txStart;

package/dist/esm/store/turso/reconcile.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/store/turso/reconcile.ts"],"sourcesContent":["import type { Config } from '../../config/index.ts';\nimport { SenseError } from '../../errors.ts';\nimport { activeFeatures } from '../../features/index.ts';\nimport type { ExtractedDoc, ReconcileDelta } from '../../features/types.ts';\nimport { progress } from '../../output/progress.ts';\nimport type { ParsedDoc } from '../../scan/index.ts';\nimport { listFiles, RESERVED_COLUMNS } from '../../scan/index.ts';\nimport { reparseFiles } from '../../scan/reparse.ts';\nimport { hasUnspacedRun } from '../../text/segment.ts';\nimport { getColumns, getMeta, quoteIdent, setMeta } from '../shared.ts';\nimport { withTransaction } from '../transaction.ts';\nimport type { Connection } from '../types.ts';\n\n// Fork of sqlite/reconcile.ts, not duckdb's, so this store keeps reconcile_max_ms bookkeeping\n// (open.ts's busy timeout derives from it). content is a plain table with \"_ngram\" sidecars for lexical.ts.\nconst CORE_FRONTMATTER_COLUMNS = new Set(['path', '_mtime', '_ctime', '_size', '_parse_error']);\n\n// '' when the field has no unspaced-script run (the common case), so the ngram index carries\n// nothing for it -- same \"pay for nothing when absent\" shape as sqlite's segmentField sidecars.\nfunction ngramSidecar(text: string): string {\n  return hasUnspacedRun(text) ? text : '';\n}\n\n// Not a compile-time cap on ALTER TABLE ADD COLUMN (spike-measured: turso accepts 10,000 with\n// no error); the real fence is a SELECT projecting more than this many result columns, which fails to prepare.\nconst MAX_FRONTMATTER_COLUMNS = 2000;\n\n// No rowid coupling (unlike sqlite's FTS5 content): `path` is content's own primary key.\nconst INSERT_CONTENT_SQL = `INSERT INTO content (\"path\", title, summary, text, title_ngram, summary_ngram, text_ngram) VALUES (?, ?, ?, ?, ?, ?, ?)`;\n\nfunction contentRow(doc: ParsedDoc): unknown[] {\n  const { title, summary, text } = doc.search;\n  return [doc.relPath, title, summary, text, ngramSidecar(title), ngramSidecar(summary), ngramSidecar(text)];\n}\n\nexport async function reconcile(conn: Connection, cfg: Config, baseDir: string): Promise<{ parsed: number; warnings: string[] }> {\n  const files = listFiles(cfg, baseDir);\n  const currentSet = new Set(files.map((f) => f.relPath));\n\n  const existingStmt = await conn.prepare('SELECT \"path\", \"_mtime\", \"_size\" FROM frontmatter');\n  const existingRows = (await existingStmt.all()) as Array<{ path: string; _mtime: number; _size: number }>;\n  const existing = new Map(existingRows.map((r) => [r.path, r]));\n  const vanished = existingRows.filter((r) => !currentSet.has(r.path)).map((r) => r.path);\n\n  const toReparse = files.filter((f) => {\n    const row = existing.get(f.relPath);\n    return !row || row._mtime !== f.mtimeMs || row._size !== f.size;\n  });\n\n  if (vanished.length === 0 && toReparse.length === 0) return { parsed: 0, warnings: [] };\n\n  const features = activeFeatures(cfg);\n  const seenColumns = await getColumns(conn);\n\n  // Bulk reparses (a sync, a cold build) are the long silences a query can hit; short\n  // reconciles stay silent (progress() has a threshold).\n  const report = progress('reparsing files', toReparse.length);\n  const { docs: parsedDocs, warnings, newColumns } = await reparseFiles(toReparse, features, cfg, seenColumns, report.tick);\n  report.finish();\n  for (const col of newColumns) seenColumns.add(col);\n\n  const allColumns = [...seenColumns];\n  if (allColumns.length > MAX_FRONTMATTER_COLUMNS) {\n    throw new SenseError(\n      'COLUMN_LIMIT',\n      `frontmatter would need ${allColumns.length} columns, crossing turso's SELECT result-set column limit (${MAX_FRONTMATTER_COLUMNS}; ALTER TABLE ADD COLUMN itself accepts far more, but a query projecting past this many columns fails to prepare). Narrow the presets' include globs so fewer/other files are indexed, or fix whatever is generating unbounded frontmatter keys.`\n    );\n  }\n  // Columns the frontmatter upsert actually writes: core + parsed frontmatter keys, never a\n  // feature-owned reserved column (see CORE_FRONTMATTER_COLUMNS above).\n  const writableColumns = allColumns.filter((c) => CORE_FRONTMATTER_COLUMNS.has(c) || !RESERVED_COLUMNS.has(c));\n  // ON CONFLICT UPDATE, rather than the delete-and-insert `OR` clause, keeps the row's identity stable across reparses.\n  const insertSql = `INSERT INTO frontmatter (${writableColumns.map(quoteIdent).join(', ')}) VALUES (${writableColumns.map(() => '?').join(', ')}) ON CONFLICT(\"path\") DO UPDATE SET ${writableColumns\n    .filter((c) => c !== 'path')\n    .map((c) => `${quoteIdent(c)} = excluded.${quoteIdent(c)}`)\n    .join(', ')}`;\n\n  const added = toReparse.filter((f) => !existing.has(f.relPath)).map((f) => f.relPath);\n  const delta: ReconcileDelta = { files, reparsed: parsedDocs.map((d) => d.relPath), added, vanished };\n  const addedSet = new Set(added);\n  const reparsedExisting = parsedDocs.map((d) => d.relPath).filter((p) => !addedSet.has(p));\n\n  const txStart = Date.now();\n  await withTransaction(conn, async () => {\n    for (const col of newColumns) await conn.exec(`ALTER TABLE frontmatter ADD COLUMN ${quoteIdent(col)}`);\n\n    if (parsedDocs.length > 0) {\n      const rows = parsedDocs.map((doc) =>\n        writableColumns.map((col) => {\n          if (col === 'path') return doc.relPath;\n          if (col === '_mtime') return doc.mtimeMs;\n          if (col === '_ctime') return doc.ctimeMs;\n          if (col === '_size') return doc.size;\n          // Written per parse, unlike _rank, which a feature pass owns and the upsert skips.\n          if (col === '_parse_error') return doc.parseError;\n          return doc.data[col] ?? null;\n        })\n      );\n      await conn.runBatch(insertSql, rows);\n    }\n\n    // content is a plain table keyed by its own path (no rowid subquery, unlike sqlite's FTS5\n    // content), so vanished and reparsed docs delete in one pass.\n    const contentTouched = [...vanished, ...reparsedExisting];\n    if (contentTouched.length > 0)\n      await conn.runBatch(\n        'DELETE FROM content WHERE \"path\" = ?',\n        contentTouched.map((p) => [p])\n      );\n    if (parsedDocs.length > 0) await conn.runBatch(INSERT_CONTENT_SQL, parsedDocs.map(contentRow));\n\n    if (vanished.length > 0)\n      await conn.runBatch(\n        'DELETE FROM frontmatter WHERE \"path\" = ?',\n        vanished.map((p) => [p])\n      );\n\n    // A preset edit forces a full rebuild, so an unchanged doc's coverage is already correct;\n    // new docs have nothing to clear, which keeps cold builds linear.\n    const presetTouched = [...vanished, ...reparsedExisting];\n    if (presetTouched.length > 0)\n      await conn.runBatch(\n        'DELETE FROM preset_files WHERE \"path\" = ?',\n        presetTouched.map((p) => [p])\n      );\n    const presetRows: unknown[][] = [];\n    for (const doc of parsedDocs) for (const presetName of doc.presets) presetRows.push([doc.relPath, presetName]);\n    if (presetRows.length > 0) await conn.runBatch('INSERT INTO preset_files (\"path\", preset) VALUES (?, ?)', presetRows);\n\n    const removedPaths = [...vanished, ...reparsedExisting];\n    if (removedPaths.length > 0) for (const feature of features) await feature.remove?.(conn, removedPaths, delta);\n    for (const feature of features) {\n      const docsForFeature: ExtractedDoc[] = parsedDocs.map((doc) => ({ path: doc.relPath, extracted: doc.extracted[feature.name] }));\n      await feature.store?.(conn, docsForFeature, delta);\n    }\n    for (const feature of features) await feature.afterReconcile?.(conn, delta);\n  });\n\n  // Reconcile's own write-transaction duration, for open()'s derived busy_timeout: the observed\n  // max is what the next open bounds its wait against.\n  const 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Narrow the presets' include globs so fewer/other files are indexed, or fix whatever is generating unbounded frontmatter keys.`\n    );\n  }\n  // Columns the frontmatter upsert actually writes: core + parsed frontmatter keys, never a\n  // feature-owned reserved column (see CORE_FRONTMATTER_COLUMNS above).\n  const writableColumns = allColumns.filter((c) => CORE_FRONTMATTER_COLUMNS.has(c) || !RESERVED_COLUMNS.has(c));\n  // ON CONFLICT UPDATE, rather than the delete-and-insert `OR` clause, keeps the row's identity stable across reparses.\n  const insertSql = `INSERT INTO frontmatter (${writableColumns.map(quoteIdent).join(', ')}) VALUES (${writableColumns.map(() => '?').join(', ')}) ON CONFLICT(\"path\") DO UPDATE SET ${writableColumns\n    .filter((c) => c !== 'path')\n    .map((c) => `${quoteIdent(c)} = excluded.${quoteIdent(c)}`)\n    .join(', ')}`;\n\n  const added = toReparse.filter((f) => !existing.has(f.relPath)).map((f) => f.relPath);\n  const delta: ReconcileDelta = { files, reparsed: parsedDocs.map((d) => d.relPath), added, vanished };\n  const addedSet = new Set(added);\n  const reparsedExisting = parsedDocs.map((d) => d.relPath).filter((p) => !addedSet.has(p));\n\n  const txStart = Date.now();\n  await withTransaction(\n    conn,\n    async () => {\n      for (const col of newColumns) await conn.exec(`ALTER TABLE frontmatter ADD COLUMN ${quoteIdent(col)}`);\n\n      if (parsedDocs.length > 0) {\n        const rows = parsedDocs.map((doc) =>\n          writableColumns.map((col) => {\n            if (col === 'path') return doc.relPath;\n            if (col === '_mtime') return doc.mtimeMs;\n            if (col === '_ctime') return doc.ctimeMs;\n            if (col === '_size') return doc.size;\n            // Written per parse, unlike _rank, which a feature pass owns and the upsert skips.\n            if (col === '_parse_error') return doc.parseError;\n            return doc.data[col] ?? null;\n          })\n        );\n        await conn.runBatch(insertSql, rows);\n      }\n\n      // Tantivy maintains the FTS index per inserted row and the cost grows with the batch, so a\n      // large insert is superlinear: 6,566 notes took 945s with the index live, 3.3s built after.\n      // Measured crossover against a full rebuild, in changed files: ~250 on a 6,566-note tree\n      // (100 -> 895ms, 300 -> 4.1s, 1,300 -> 45.5s, rebuild 3.35s), ~295 on 13,132 (250 -> 5.2s,\n      // 400 -> 10.0s, rebuild 6.7s). Doubling the corpus moved it 250 to 295, so a constant fits\n      // where a ratio does not: 20% would allow 1,313 files here, costing 45s to save 3.3s.\n      // Erring low is the cheap direction, since a needless rebuild is linear and predictable.\n      const churn = delta.reparsed.length + delta.vanished.length;\n      const bulk = delta.files.length === 0 || churn > FTS_REBUILD_THRESHOLD;\n      if (bulk) for (const name of CONTENT_FTS_NAMES) await conn.exec(`DROP INDEX IF EXISTS ${name}`);\n\n      // content is a plain table keyed by its own path (no rowid subquery, unlike sqlite's FTS5\n      // content), so vanished and reparsed docs delete in one pass.\n      const contentTouched = [...vanished, ...reparsedExisting];\n      if (contentTouched.length > 0)\n        await conn.runBatch(\n          'DELETE FROM content WHERE \"path\" = ?',\n          contentTouched.map((p) => [p])\n        );\n      if (parsedDocs.length > 0) await conn.runBatch(INSERT_CONTENT_SQL, 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null ? -1 : Number(prevRaw);\n  if (durationMs > prevMax) await setMeta(conn, 'reconcile_max_ms', String(durationMs));\n\n  return { parsed: parsedDocs.length, warnings 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "sensemaking",
-  "version": "0.19.0",
+  "version": "0.19.1",
   "description": "Query and search your markdown notes with context-aware progressive disclosure: SQL over frontmatter, links, and text, plus semantic search and link-graph ranking. No server, no build step",
   "keywords": [
     "markdown",