sensemaking 0.15.4 → 0.17.0

package/dist/cjs/db/reconcile.js

@@ -12,6 +12,9 @@ _export(exports, {
     get changedSignatureKeys () {
         return changedSignatureKeys;
     },
+    get embedIdentityAdopted () {
+        return embedIdentityAdopted;
+    },
     get rebuildContentTable () {
         return rebuildContentTable;
     },
@@ -25,9 +28,9 @@ _export(exports, {
 var _indexts = require("../config/index.js");
 var _errorsts = require("../errors.js");
 var _indexts1 = require("../features/index.js");
-var _progressts = require("../progress.js");
-var _scants = require("../scan.js");
-var _segmentts = require("../segment.js");
+var _progressts = require("../output/progress.js");
+var _indexts2 = require("../scan/index.js");
+var _segmentts = require("../text/segment.js");
 var _sharedts = require("./shared.js");
 function _array_like_to_array(arr, len) {
     if (len == null || len > arr.length) len = arr.length;
@@ -109,7 +112,7 @@ function insertContentRow(insertBody, doc, segmenting) {
     insertBody.run(doc.relPath, doc.search.title, doc.search.summary, doc.search.text, doc.relPath, segmenting ? (0, _segmentts.segmentField)(doc.search.title) : '', segmenting ? (0, _segmentts.segmentField)(doc.search.summary) : '', segmenting ? (0, _segmentts.segmentField)(doc.search.text) : '');
 }
 function reconcile(db, cfg, baseDir) {
-    var files = (0, _scants.listFiles)(cfg, baseDir);
+    var files = (0, _indexts2.listFiles)(cfg, baseDir);
     var currentSet = new Set(files.map(function(f) {
         return f.relPath;
     }));
@@ -152,7 +155,7 @@ function reconcile(db, cfg, baseDir) {
             var fileFeatures = features.filter(function(feature) {
                 return !feature.enabledForFile || feature.enabledForFile(cfg, file);
             });
-            var _parseFile = (0, _scants.parseFile)(file, fileFeatures), doc = _parseFile.doc, fileWarnings = _parseFile.warnings;
+            var _parseFile = (0, _indexts2.parseFile)(file, fileFeatures, cfg), doc = _parseFile.doc, fileWarnings = _parseFile.warnings;
             report.tick(++parsedCount);
             (_warnings = warnings).push.apply(_warnings, _to_consumable_array(fileWarnings));
             var _iteratorNormalCompletion = true, _didIteratorError = false, _iteratorError = undefined;
@@ -205,7 +208,7 @@ function reconcile(db, cfg, baseDir) {
     // Columns the frontmatter upsert actually writes: core + parsed frontmatter keys, never a
     // feature-owned reserved column (see CORE_FRONTMATTER_COLUMNS above).
     var writableColumns = allColumns.filter(function(c) {
-        return CORE_FRONTMATTER_COLUMNS.has(c) || !_scants.RESERVED_COLUMNS.has(c);
+        return CORE_FRONTMATTER_COLUMNS.has(c) || !_indexts2.RESERVED_COLUMNS.has(c);
     });
     // ON CONFLICT UPDATE (not OR REPLACE) keeps the row's rowid stable across reparses --
     // content rows are coupled to that rowid below.
@@ -512,6 +515,18 @@ function changedSignatureKeys(before, after) {
     }
     return changed;
 }
+function embedIdentityAdopted(before, after) {
+    var embedPart = function embedPart(sig) {
+        return sig.split('|').find(function(p) {
+            return p.startsWith('embed:');
+        });
+    };
+    var b = embedPart(before);
+    var a = embedPart(after);
+    if (b === undefined || a === undefined) return false;
+    var at = a.indexOf('@');
+    return b.indexOf('@') === -1 && at !== -1 && a.slice(0, at) === b;
+}
 function signatureDiff(before, after) {
     var changed = changedSignatureKeys(before, after);
     var label = function label(key) {
@@ -523,7 +538,7 @@ function rebuildContentTable(db, cfg, baseDir) {
     var known = new Set(db.prepare('SELECT "path" FROM frontmatter').all().map(function(r) {
         return r.path;
     }));
-    var files = (0, _scants.listFiles)(cfg, baseDir).filter(function(f) {
+    var files = (0, _indexts2.listFiles)(cfg, baseDir).filter(function(f) {
         return known.has(f.relPath);
     });
     var segmenting = (0, _indexts.contentTokenize)(cfg) === undefined;
@@ -536,7 +551,7 @@ function rebuildContentTable(db, cfg, baseDir) {
             for(var _iterator = files[Symbol.iterator](), _step; !(_iteratorNormalCompletion = (_step = _iterator.next()).done); _iteratorNormalCompletion = true){
                 var file = _step.value;
                 var _warnings;
-                var _parseFile = (0, _scants.parseFile)(file), doc = _parseFile.doc, fileWarnings = _parseFile.warnings;
+                var _parseFile = (0, _indexts2.parseFile)(file), doc = _parseFile.doc, fileWarnings = _parseFile.warnings;
                 (_warnings = warnings).push.apply(_warnings, _to_consumable_array(fileWarnings));
                 insertContentRow(insertBody, doc, segmenting);
             }

package/dist/cjs/db/reconcile.js.map

@@ -1 +1 @@
-{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/db/reconcile.ts"],"sourcesContent":["import type { DatabaseSync, StatementSync } from 'node:sqlite';\nimport type { Config } from '../config/index.ts';\nimport { contentTokenize } from '../config/index.ts';\nimport { SenseError } from '../errors.ts';\nimport { activeFeatures } from '../features/index.ts';\nimport type { ReconcileDelta } from '../features/types.ts';\nimport { progress } from '../progress.ts';\nimport type { ParsedDoc } from '../scan.ts';\nimport { listFiles, parseFile, RESERVED_COLUMNS } from '../scan.ts';\nimport { segmentField } from '../segment.ts';\nimport { getColumns, getMeta, quoteIdent, setMeta } from './shared.ts';\n\n// Feature-owned columns (`_rank`) must stay out of the upsert: a reparse would null the last\n// computed value on every touch, not just the reconciles that recompute it.\nconst CORE_FRONTMATTER_COLUMNS = new Set(['path', '_mtime', '_ctime', '_size', '_parse_error']);\n\n// SQLite's compile-time SQLITE_MAX_COLUMN, default 2000 (https://www.sqlite.org/limits.html).\nconst MAX_FRONTMATTER_COLUMNS = 2000;\n\n// Shared by reconcile() and the tokenize-only rebuild in open(), so both prepare the same\n// literal instead of two copies drifting apart.\nconst INSERT_CONTENT_SQL = `INSERT INTO content (rowid, title, summary, text, \"path\", title_seg, summary_seg, text_seg) VALUES ((SELECT rowid FROM frontmatter WHERE \"path\" = ?), ?, ?, ?, ?, ?, ?, ?)`;\n\n// Shared by reconcile() and the tokenize-only rebuild in open(), so content population is\n// defined once. Assumes the frontmatter row for doc.relPath already exists (rowid lookup).\nfunction insertContentRow(insertBody: StatementSync, doc: ParsedDoc, segmenting: boolean): void {\n  insertBody.run(doc.relPath, doc.search.title, doc.search.summary, doc.search.text, doc.relPath, segmenting ? segmentField(doc.search.title) : '', segmenting ? segmentField(doc.search.summary) : '', segmenting ? segmentField(doc.search.text) : '');\n}\n\nexport function reconcile(db: DatabaseSync, cfg: Config, baseDir: string): { parsed: number; warnings: string[] } {\n  const files = listFiles(cfg, baseDir);\n  const currentSet = new Set(files.map((f) => f.relPath));\n\n  const existingRows = db.prepare(`SELECT \"path\", \"_mtime\", \"_size\" FROM frontmatter`).all() as Array<{\n    path: string;\n    _mtime: number;\n    _size: number;\n  }>;\n  const existing = new Map(existingRows.map((r) => [r.path, r]));\n  const vanished = existingRows.filter((r) => !currentSet.has(r.path)).map((r) => r.path);\n\n  const toReparse = files.filter((f) => {\n    const row = existing.get(f.relPath);\n    return !row || row._mtime !== f.mtimeMs || row._size !== f.size;\n  });\n\n  if (vanished.length === 0 && toReparse.length === 0) return { parsed: 0, warnings: [] };\n\n  const features = activeFeatures(cfg);\n  const seenColumns = getColumns(db);\n  const newColumns: string[] = [];\n  const parsedDocs: ParsedDoc[] = [];\n  const warnings: string[] = [];\n\n  // Bulk reparses (a sync, a cold build) are the long silences a query can hit; short\n  // reconciles stay silent (progress() has a threshold).\n  const report = progress('reparsing files', toReparse.length);\n  let parsedCount = 0;\n  for (const file of toReparse) {\n    // A doc only gets extract/store from features that apply to it (currently: embed, via\n    // FileStat.embed -- true iff the config names an embedding model).\n    const fileFeatures = features.filter((feature) => !feature.enabledForFile || feature.enabledForFile(cfg, file));\n    const { doc, warnings: fileWarnings } = parseFile(file, fileFeatures);\n    report.tick(++parsedCount);\n    warnings.push(...fileWarnings);\n    for (const key of Object.keys(doc.data)) {\n      if (!seenColumns.has(key)) {\n        seenColumns.add(key);\n        newColumns.push(key);\n      }\n    }\n    parsedDocs.push(doc);\n  }\n  report.finish();\n\n  const allColumns = [...seenColumns];\n  // Fence before ALTERing: SQLite's own failure past this point is a raw\n  // \"too many columns on sqlite_altertab_frontmatter\" with no indication of the boundary or the levers.\n  if (allColumns.length > MAX_FRONTMATTER_COLUMNS) {\n    throw new SenseError(\n      'COLUMN_LIMIT',\n      `frontmatter would need ${allColumns.length} columns, crossing SQLite's compile-time SQLITE_MAX_COLUMN limit (default ${MAX_FRONTMATTER_COLUMNS}; see https://www.sqlite.org/limits.html). Narrow the presets' include globs so fewer/other files are indexed, or fix whatever is generating unbounded frontmatter keys.`\n    );\n  }\n  // Columns the frontmatter upsert actually writes: core + parsed frontmatter keys, never a\n  // feature-owned reserved column (see CORE_FRONTMATTER_COLUMNS above).\n  const writableColumns = allColumns.filter((c) => CORE_FRONTMATTER_COLUMNS.has(c) || !RESERVED_COLUMNS.has(c));\n  // ON CONFLICT UPDATE (not OR REPLACE) keeps the row's rowid stable across reparses --\n  // content rows are coupled to that rowid below.\n  const insertSql = `INSERT INTO frontmatter (${writableColumns.map(quoteIdent).join(', ')}) VALUES (${writableColumns.map(() => '?').join(', ')}) ON CONFLICT(\"path\") DO UPDATE SET ${writableColumns\n    .filter((c) => c !== 'path')\n    .map((c) => `${quoteIdent(c)} = excluded.${quoteIdent(c)}`)\n    .join(', ')}`;\n\n  const added = toReparse.filter((f) => !existing.has(f.relPath)).map((f) => f.relPath);\n  const delta: ReconcileDelta = { files, reparsed: parsedDocs.map((d) => d.relPath), added, vanished };\n\n  const txStart = Date.now();\n  db.exec('BEGIN');\n  try {\n    for (const col of newColumns) db.exec(`ALTER TABLE frontmatter ADD COLUMN ${quoteIdent(col)}`);\n    // FTS5 has no upsert, so delete-before-insert into `content`; coupled to the\n    // frontmatter rowid (indexed via its PRIMARY KEY) instead of the UNINDEXED `path`\n    // column, which a per-row DELETE would otherwise scan the whole table to find.\n    const delBody = db.prepare(`DELETE FROM content WHERE rowid = (SELECT rowid FROM frontmatter WHERE \"path\" = ?)`);\n    const delPresetFiles = db.prepare(`DELETE FROM preset_files WHERE \"path\" = ?`);\n    const insertPresetFile = db.prepare(`INSERT INTO preset_files (\"path\", preset) VALUES (?, ?)`);\n    if (vanished.length > 0) {\n      const del = db.prepare(`DELETE FROM frontmatter WHERE \"path\" = ?`);\n      for (const path of vanished) {\n        // content delete must run first: it looks up the frontmatter rowid by path, which\n        // the frontmatter delete below would otherwise have already removed.\n        delBody.run(path);\n        del.run(path);\n        delPresetFiles.run(path);\n        for (const feature of features) feature.remove?.(db, path, delta);\n      }\n    }\n    if (parsedDocs.length > 0) {\n      const insert = db.prepare(insertSql);\n      const insertBody = db.prepare(INSERT_CONTENT_SQL);\n      // A non-default tokenizer means the tree has chosen its own scheme; a phrase query over\n      // grapheme runs would be nonsense against trigram, so the sidecars stay empty.\n      const segmenting = contentTokenize(cfg) === undefined;\n      for (const doc of parsedDocs) {\n        const values = writableColumns.map((col) => {\n          if (col === 'path') return doc.relPath;\n          if (col === '_mtime') return doc.mtimeMs;\n          if (col === '_ctime') return doc.ctimeMs;\n          if (col === '_size') return doc.size;\n          // Written per parse, unlike _rank, which a feature pass owns and the upsert skips.\n          if (col === '_parse_error') return doc.parseError;\n          return doc.data[col] ?? null;\n        });\n        // Frontmatter upsert first: content's rowid lookup below depends on this row existing.\n        insert.run(...values);\n        // Only for docs that have rows: an unconditional delete made cold crawls quadratic.\n        if (existing.has(doc.relPath)) {\n          delBody.run(doc.relPath);\n          for (const feature of features) feature.remove?.(db, doc.relPath, delta);\n        }\n        insertContentRow(insertBody, doc, segmenting);\n        // A preset edit forces a full rebuild, so an unchanged doc's coverage is already\n        // correct; new docs have nothing to clear, which keeps cold builds linear.\n        if (existing.has(doc.relPath)) delPresetFiles.run(doc.relPath);\n        for (const presetName of doc.presets) insertPresetFile.run(doc.relPath, presetName);\n        for (const feature of features) feature.store?.(db, doc.relPath, doc.extracted[feature.name], delta);\n      }\n    }\n    for (const feature of features) feature.afterReconcile?.(db, delta);\n    db.exec('COMMIT');\n  } catch (err) {\n    db.exec('ROLLBACK');\n    throw err;\n  }\n\n  // Reconcile's own write-transaction duration, for open()'s derived busy_timeout (F):\n  // keep the observed max so a big watcher reconcile's lock hold is what the next open bounds its wait against.\n  const durationMs = Date.now() - txStart;\n  const prevRaw = getMeta(db, 'reconcile_max_ms');\n  // -1, not 0, so a genuinely 0ms first reconcile (sub-millisecond, common on a tiny tree)\n  // still gets recorded instead of losing to the \"nothing recorded yet\" default.\n  const prevMax = prevRaw === null ? -1 : Number(prevRaw);\n  if (durationMs > prevMax) setMeta(db, 'reconcile_max_ms', String(durationMs));\n\n  return { parsed: parsedDocs.length, warnings };\n}\n\n// Segment keys that moved between two feature signatures (see config.featureSignature's\n// format: global features, embed provider, tokenize, then one segment per preset).\nexport function changedSignatureKeys(before: string, after: string): Set<string> {\n  const keyOf = (part: string) => (part.startsWith('preset:') ? part.split(':').slice(0, 2).join(':') : part.split(':')[0]);\n  const parse = (sig: string) => new Map(sig.split('|').map((part) => [keyOf(part), part]));\n  const a = parse(before);\n  const b = parse(after);\n  const changed = new Set<string>();\n  for (const [key, val] of b) if (a.get(key) !== val) changed.add(key);\n  for (const key of a.keys()) if (!b.has(key)) changed.add(key);\n  return changed;\n}\n\n// Names what moved, for the rebuild notice.\nexport function signatureDiff(before: string, after: string): string {\n  const changed = changedSignatureKeys(before, after);\n  const label = (key: string) => (key === 'embed' ? 'embed settings' : key === 'tokenize' ? 'content tokenizer' : key.startsWith('preset:') ? `preset \"${key.slice(7)}\"` : 'features');\n  return changed.size === 0 ? 'features' : [...changed].map(label).join(', ');\n}\n\n// The tokenize-only rebuild in open(): content is dropped and repopulated from files already\n// listed in frontmatter, which itself is untouched. Frontmatter, links, sections, and\n// embeddings are file-derived and tokenizer-independent, so they survive. No feature extractors\n// run here -- doc.search (title/summary/text) is all content population needs. Returns\n// parseFile's per-file warnings (e.g. a bad date) so open() can surface them -- mtimes are\n// untouched, so reconcile() never reparses these files and would otherwise never emit them again.\nexport function rebuildContentTable(db: DatabaseSync, cfg: Config, baseDir: string): string[] {\n  const known = new Set((db.prepare('SELECT \"path\" FROM frontmatter').all() as Array<{ path: string }>).map((r) => r.path));\n  const files = listFiles(cfg, baseDir).filter((f) => known.has(f.relPath));\n  const segmenting = contentTokenize(cfg) === undefined;\n  const insertBody = db.prepare(INSERT_CONTENT_SQL);\n  const warnings: string[] = [];\n  db.exec('BEGIN');\n  try {\n    for (const file of files) {\n      const { doc, warnings: fileWarnings } = parseFile(file);\n      warnings.push(...fileWarnings);\n      insertContentRow(insertBody, doc, segmenting);\n    }\n    db.exec('COMMIT');\n  } catch (err) {\n    db.exec('ROLLBACK');\n    throw err;\n  }\n  return 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Narrow the presets' include globs so fewer/other files are indexed, or fix whatever is generating unbounded frontmatter keys.`\n    );\n  }\n  // Columns the frontmatter upsert actually writes: core + parsed frontmatter keys, never a\n  // feature-owned reserved column (see CORE_FRONTMATTER_COLUMNS above).\n  const writableColumns = allColumns.filter((c) => CORE_FRONTMATTER_COLUMNS.has(c) || !RESERVED_COLUMNS.has(c));\n  // ON CONFLICT UPDATE (not OR REPLACE) keeps the row's rowid stable across reparses --\n  // content rows are coupled to that rowid below.\n  const insertSql = `INSERT INTO frontmatter (${writableColumns.map(quoteIdent).join(', ')}) VALUES (${writableColumns.map(() => '?').join(', ')}) ON CONFLICT(\"path\") DO UPDATE SET ${writableColumns\n    .filter((c) => c !== 'path')\n    .map((c) => `${quoteIdent(c)} = excluded.${quoteIdent(c)}`)\n    .join(', ')}`;\n\n  const added = toReparse.filter((f) => !existing.has(f.relPath)).map((f) => f.relPath);\n  const delta: ReconcileDelta = { files, reparsed: parsedDocs.map((d) => d.relPath), added, vanished };\n\n  const txStart = Date.now();\n  db.exec('BEGIN');\n  try {\n    for (const col of newColumns) db.exec(`ALTER TABLE frontmatter ADD COLUMN ${quoteIdent(col)}`);\n    // FTS5 has no upsert, so delete-before-insert into `content`; coupled to the\n    // frontmatter rowid (indexed via its PRIMARY KEY) instead of the UNINDEXED `path`\n    // column, which a per-row DELETE would otherwise scan the whole table to find.\n    const delBody = db.prepare(`DELETE FROM content WHERE rowid = (SELECT rowid FROM frontmatter WHERE \"path\" = ?)`);\n    const delPresetFiles = db.prepare(`DELETE FROM preset_files WHERE \"path\" = ?`);\n    const insertPresetFile = db.prepare(`INSERT INTO preset_files (\"path\", preset) VALUES (?, ?)`);\n    if (vanished.length > 0) {\n      const del = db.prepare(`DELETE FROM frontmatter WHERE \"path\" = ?`);\n      for (const path of vanished) {\n        // content delete must run first: it looks up the frontmatter rowid by path, which\n        // the frontmatter delete below would otherwise have already removed.\n        delBody.run(path);\n        del.run(path);\n        delPresetFiles.run(path);\n        for (const feature of features) feature.remove?.(db, path, delta);\n      }\n    }\n    if (parsedDocs.length > 0) {\n      const insert = db.prepare(insertSql);\n      const insertBody = db.prepare(INSERT_CONTENT_SQL);\n      // A non-default tokenizer means the tree has chosen its own scheme; a phrase query over\n      // grapheme runs would be nonsense against trigram, so the sidecars stay empty.\n      const segmenting = contentTokenize(cfg) === undefined;\n      for (const doc of parsedDocs) {\n        const values = writableColumns.map((col) => {\n          if (col === 'path') return doc.relPath;\n          if (col === '_mtime') return doc.mtimeMs;\n          if (col === '_ctime') return doc.ctimeMs;\n          if (col === '_size') return doc.size;\n          // Written per parse, unlike _rank, which a feature pass owns and the upsert skips.\n          if (col === '_parse_error') return doc.parseError;\n          return doc.data[col] ?? null;\n        });\n        // Frontmatter upsert first: content's rowid lookup below depends on this row existing.\n        insert.run(...values);\n        // Only for docs that have rows: an unconditional delete made cold crawls quadratic.\n        if (existing.has(doc.relPath)) {\n          delBody.run(doc.relPath);\n          for (const feature of features) feature.remove?.(db, doc.relPath, delta);\n        }\n        insertContentRow(insertBody, doc, segmenting);\n        // A preset edit forces a full rebuild, so an unchanged doc's coverage is already\n        // correct; new docs have nothing to clear, which keeps cold builds linear.\n        if (existing.has(doc.relPath)) delPresetFiles.run(doc.relPath);\n        for (const presetName of doc.presets) insertPresetFile.run(doc.relPath, presetName);\n        for (const feature of features) feature.store?.(db, doc.relPath, doc.extracted[feature.name], delta);\n      }\n    }\n    for (const feature of features) feature.afterReconcile?.(db, delta);\n    db.exec('COMMIT');\n  } catch (err) {\n    db.exec('ROLLBACK');\n    throw err;\n  }\n\n  // Reconcile's own write-transaction duration, for open()'s derived busy_timeout (F):\n  // keep the observed max so a big watcher reconcile's lock hold is what the next open bounds its wait against.\n  const durationMs = Date.now() - txStart;\n  const prevRaw = getMeta(db, 'reconcile_max_ms');\n  // -1, not 0, so a genuinely 0ms first reconcile (sub-millisecond, common on a tiny tree)\n  // still gets recorded instead of losing to the \"nothing recorded yet\" default.\n  const prevMax = prevRaw === null ? -1 : Number(prevRaw);\n  if (durationMs > prevMax) setMeta(db, 'reconcile_max_ms', String(durationMs));\n\n  return { parsed: parsedDocs.length, warnings };\n}\n\n// Segment keys that moved between two feature signatures (see config.featureSignature's\n// format: global features, embed provider, tokenize, then one segment per preset).\nexport function changedSignatureKeys(before: string, after: string): Set<string> {\n  const keyOf = (part: string) => (part.startsWith('preset:') ? part.split(':').slice(0, 2).join(':') : part.split(':')[0]);\n  const parse = (sig: string) => new Map(sig.split('|').map((part) => [keyOf(part), part]));\n  const a = parse(before);\n  const b = parse(after);\n  const changed = new Set<string>();\n  for (const [key, val] of b) if (a.get(key) !== val) changed.add(key);\n  for (const key of a.keys()) if (!b.has(key)) changed.add(key);\n  return changed;\n}\n\n// Whether the embed segment only gained its resolved weight identity: same provider and\n// model, no identity recorded before, one now -- adopted into meta without a rebuild.\nexport function embedIdentityAdopted(before: string, after: string): boolean {\n  const embedPart = (sig: string) => sig.split('|').find((p) => p.startsWith('embed:'));\n  const b = embedPart(before);\n  const a = embedPart(after);\n  if (b === undefined || a === undefined) return false;\n  const at = a.indexOf('@');\n  return b.indexOf('@') === -1 && at !== -1 && a.slice(0, at) === b;\n}\n\n// Names what moved, for the rebuild notice.\nexport function signatureDiff(before: string, after: string): string {\n  const changed = changedSignatureKeys(before, after);\n  const label = (key: string) => (key === 'embed' ? 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package/dist/cjs/{sql-functions.js → db/sql-functions.js}

@@ -9,7 +9,7 @@ Object.defineProperty(exports, "registerFunctions", {
     }
 });
 var _posix = /*#__PURE__*/ _interop_require_default(require("node:path/posix"));
-var _segmentts = require("./segment.js");
+var _segmentts = require("../text/segment.js");
 function _interop_require_default(obj) {
     return obj && obj.__esModule ? obj : {
         default: obj

package/dist/cjs/db/sql-functions.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/db/sql-functions.ts"],"sourcesContent":["import posix from 'node:path/posix';\nimport type { DatabaseSync } from 'node:sqlite';\nimport { segmentMatch } from '../text/segment.ts';\n\n// has(field, value): JSON-array field -> membership, string field -> substring, NULL -> false.\nexport function registerFunctions(db: DatabaseSync, segmenting: boolean): void {\n  db.function('has', { deterministic: true, varargs: false }, (field: unknown, value: unknown): number => {\n    if (field === null || field === undefined) return 0;\n\n    const needle = String(value);\n\n    if (typeof field === 'string') {\n      if (field.startsWith('[')) {\n        try {\n          const parsed = JSON.parse(field);\n          if (Array.isArray(parsed)) {\n            return parsed.some((item) => String(item) === needle) ? 1 : 0;\n          }\n        } catch {}\n      }\n      return field.includes(needle) ? 1 : 0;\n    }\n\n    return String(field).includes(needle) ? 1 : 0;\n  });\n\n  // Unix basename(path, suffix?): the filename, minus suffix when it ends with one. SQLite\n  // itself has no filename function, and the LIKE tricks that fake one also match folder names.\n  db.function('basename', { deterministic: true, varargs: true }, (path: unknown, suffix?: unknown): string | null => {\n    if (path === null || path === undefined) return null;\n    const name = posix.basename(String(path));\n    const tail = suffix === null || suffix === undefined ? '' : String(suffix);\n    // POSIX: a suffix identical to the whole name is not removed (node's own basename strips it).\n    return tail !== '' && tail !== name && name.endsWith(tail) ? name.slice(0, -tail.length) : name;\n  });\n\n  // Raw `content MATCH '<unspaced text>'` cannot be rewritten behind the author's back, and\n  // matches nothing, so the same transform is available to hand-written SQL by name. `segmenting`\n  // is the same config predicate commands.ts's search() gates on (contentTokenize(cfg) ===\n  // undefined), passed in by open() rather than read back from persisted state.\n  db.function('segment', { deterministic: true, varargs: false }, (terms: unknown): string => {\n    const text = terms === null || terms === undefined ? '' : String(terms);\n    return segmenting ? segmentMatch(text) : text;\n  });\n}\n"],"names":["registerFunctions","db","segmenting","function","deterministic","varargs","field","value","undefined","needle","String","startsWith","parsed","JSON","parse","Array","isArray","some","item","includes","path","suffix","name","posix","basename","tail","endsWith","slice","length","terms","text","segmentMatch"],"mappings":";;;;+BAKgBA;;;eAAAA;;;4DALE;yBAEW;;;;;;AAGtB,SAASA,kBAAkBC,EAAgB,EAAEC,UAAmB;IACrED,GAAGE,QAAQ,CAAC,OAAO;QAAEC,eAAe;QAAMC,SAAS;IAAM,GAAG,SAACC,OAAgBC;QAC3E,IAAID,UAAU,QAAQA,UAAUE,WAAW,OAAO;QAElD,IAAMC,SAASC,OAAOH;QAEtB,IAAI,OAAOD,UAAU,UAAU;YAC7B,IAAIA,MAAMK,UAAU,CAAC,MAAM;gBACzB,IAAI;oBACF,IAAMC,SAASC,KAAKC,KAAK,CAACR;oBAC1B,IAAIS,MAAMC,OAAO,CAACJ,SAAS;wBACzB,OAAOA,OAAOK,IAAI,CAAC,SAACC;mCAASR,OAAOQ,UAAUT;6BAAU,IAAI;oBAC9D;gBACF,EAAE,eAAM,CAAC;YACX;YACA,OAAOH,MAAMa,QAAQ,CAACV,UAAU,IAAI;QACtC;QAEA,OAAOC,OAAOJ,OAAOa,QAAQ,CAACV,UAAU,IAAI;IAC9C;IAEA,yFAAyF;IACzF,8FAA8F;IAC9FR,GAAGE,QAAQ,CAAC,YAAY;QAAEC,eAAe;QAAMC,SAAS;IAAK,GAAG,SAACe,MAAeC;QAC9E,IAAID,SAAS,QAAQA,SAASZ,WAAW,OAAO;QAChD,IAAMc,OAAOC,cAAK,CAACC,QAAQ,CAACd,OAAOU;QACnC,IAAMK,OAAOJ,WAAW,QAAQA,WAAWb,YAAY,KAAKE,OAAOW;QACnE,8FAA8F;QAC9F,OAAOI,SAAS,MAAMA,SAASH,QAAQA,KAAKI,QAAQ,CAACD,QAAQH,KAAKK,KAAK,CAAC,GAAG,CAACF,KAAKG,MAAM,IAAIN;IAC7F;IAEA,0FAA0F;IAC1F,gGAAgG;IAChG,yFAAyF;IACzF,8EAA8E;IAC9ErB,GAAGE,QAAQ,CAAC,WAAW;QAAEC,eAAe;QAAMC,SAAS;IAAM,GAAG,SAACwB;QAC/D,IAAMC,OAAOD,UAAU,QAAQA,UAAUrB,YAAY,KAAKE,OAAOmB;QACjE,OAAO3B,aAAa6B,IAAAA,uBAAY,EAACD,QAAQA;IAC3C;AACF"}

package/dist/cjs/embed/cohere.d.cts

@@ -0,0 +1,2 @@
+import type { EmbedProvider } from './types.js';
+export declare function cohereProvider(model: string, url: string | undefined, keyEnv: string | undefined): Promise<EmbedProvider>;

package/dist/cjs/embed/cohere.d.ts

@@ -0,0 +1,2 @@
+import type { EmbedProvider } from './types.js';
+export declare function cohereProvider(model: string, url: string | undefined, keyEnv: string | undefined): Promise<EmbedProvider>;

package/dist/cjs/embed/cohere.js

@@ -0,0 +1,238 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", {
+    value: true
+});
+Object.defineProperty(exports, "cohereProvider", {
+    enumerable: true,
+    get: function() {
+        return cohereProvider;
+    }
+});
+var _errorsts = require("../errors.js");
+var _httpts = require("./http.js");
+function asyncGeneratorStep(gen, resolve, reject, _next, _throw, key, arg) {
+    try {
+        var info = gen[key](arg);
+        var value = info.value;
+    } catch (error) {
+        reject(error);
+        return;
+    }
+    if (info.done) resolve(value);
+    else Promise.resolve(value).then(_next, _throw);
+}
+function _async_to_generator(fn) {
+    return function() {
+        var self = this, args = arguments;
+        return new Promise(function(resolve, reject) {
+            var gen = fn.apply(self, args);
+            function _next(value) {
+                asyncGeneratorStep(gen, resolve, reject, _next, _throw, "next", value);
+            }
+            function _throw(err) {
+                asyncGeneratorStep(gen, resolve, reject, _next, _throw, "throw", err);
+            }
+            _next(undefined);
+        });
+    };
+}
+function _ts_generator(thisArg, body) {
+    var f, y, t, _ = {
+        label: 0,
+        sent: function() {
+            if (t[0] & 1) throw t[1];
+            return t[1];
+        },
+        trys: [],
+        ops: []
+    }, g = Object.create((typeof Iterator === "function" ? Iterator : Object).prototype), d = Object.defineProperty;
+    return d(g, "next", {
+        value: verb(0)
+    }), d(g, "throw", {
+        value: verb(1)
+    }), d(g, "return", {
+        value: verb(2)
+    }), typeof Symbol === "function" && d(g, Symbol.iterator, {
+        value: function() {
+            return this;
+        }
+    }), g;
+    function verb(n) {
+        return function(v) {
+            return step([
+                n,
+                v
+            ]);
+        };
+    }
+    function step(op) {
+        if (f) throw new TypeError("Generator is already executing.");
+        while(g && (g = 0, op[0] && (_ = 0)), _)try {
+            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
+            if (y = 0, t) op = [
+                op[0] & 2,
+                t.value
+            ];
+            switch(op[0]){
+                case 0:
+                case 1:
+                    t = op;
+                    break;
+                case 4:
+                    _.label++;
+                    return {
+                        value: op[1],
+                        done: false
+                    };
+                case 5:
+                    _.label++;
+                    y = op[1];
+                    op = [
+                        0
+                    ];
+                    continue;
+                case 7:
+                    op = _.ops.pop();
+                    _.trys.pop();
+                    continue;
+                default:
+                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) {
+                        _ = 0;
+                        continue;
+                    }
+                    if (op[0] === 3 && (!t || op[1] > t[0] && op[1] < t[3])) {
+                        _.label = op[1];
+                        break;
+                    }
+                    if (op[0] === 6 && _.label < t[1]) {
+                        _.label = t[1];
+                        t = op;
+                        break;
+                    }
+                    if (t && _.label < t[2]) {
+                        _.label = t[2];
+                        _.ops.push(op);
+                        break;
+                    }
+                    if (t[2]) _.ops.pop();
+                    _.trys.pop();
+                    continue;
+            }
+            op = body.call(thisArg, _);
+        } catch (e) {
+            op = [
+                6,
+                e
+            ];
+            y = 0;
+        } finally{
+            f = t = 0;
+        }
+        if (op[0] & 5) throw op[1];
+        return {
+            value: op[0] ? op[1] : void 0,
+            done: true
+        };
+    }
+}
+var BATCH_CAP = 96;
+function cohereProvider(model, url, keyEnv) {
+    return _async_to_generator(function() {
+        var base, headers, key, dims;
+        function post(texts, inputType) {
+            return _async_to_generator(function() {
+                var res, body, vectors;
+                return _ts_generator(this, function(_state) {
+                    switch(_state.label){
+                        case 0:
+                            return [
+                                4,
+                                (0, _httpts.fetchWithRetry)("".concat(base, "/v2/embed"), {
+                                    method: 'POST',
+                                    headers: headers,
+                                    body: JSON.stringify({
+                                        model: model,
+                                        input_type: inputType,
+                                        texts: texts,
+                                        embedding_types: [
+                                            'float'
+                                        ]
+                                    })
+                                })
+                            ];
+                        case 1:
+                            res = _state.sent();
+                            if (!res.ok) throw new _errorsts.SenseError('EMBED_MODEL', "".concat(base, "/v2/embed -> HTTP ").concat(res.status));
+                            return [
+                                4,
+                                res.json()
+                            ];
+                        case 2:
+                            body = _state.sent();
+                            // Cohere returns one vector per text in order, with no index field to re-sort by; the
+                            // count is what a caller mapping positionally still has to be able to trust.
+                            vectors = body.embeddings.float;
+                            if (vectors.length !== texts.length) throw new _errorsts.SenseError('EMBED_MODEL', "".concat(base, "/v2/embed returned ").concat(vectors.length, " embeddings for ").concat(texts.length, " inputs"));
+                            return [
+                                2,
+                                vectors.map(function(v) {
+                                    return Float32Array.from(v);
+                                })
+                            ];
+                    }
+                });
+            })();
+        }
+        return _ts_generator(this, function(_state) {
+            switch(_state.label){
+                case 0:
+                    base = (url !== null && url !== void 0 ? url : 'https://api.cohere.com').replace(/\/+$/, '');
+                    headers = {
+                        'content-type': 'application/json'
+                    };
+                    key = keyEnv ? process.env[keyEnv] : undefined;
+                    if (key) headers.authorization = "Bearer ".concat(key);
+                    return [
+                        4,
+                        post([
+                            'dimension probe'
+                        ], 'search_query')
+                    ];
+                case 1:
+                    dims = _state.sent()[0].length;
+                    return [
+                        2,
+                        {
+                            id: "cohere:".concat(base, ":").concat(model),
+                            dims: dims,
+                            batchCap: BATCH_CAP,
+                            embedDocuments: function embedDocuments(texts) {
+                                return post(texts, 'search_document');
+                            },
+                            embedQuery: function embedQuery(text) {
+                                return _async_to_generator(function() {
+                                    return _ts_generator(this, function(_state) {
+                                        switch(_state.label){
+                                            case 0:
+                                                return [
+                                                    4,
+                                                    post([
+                                                        text
+                                                    ], 'search_query')
+                                                ];
+                                            case 1:
+                                                return [
+                                                    2,
+                                                    _state.sent()[0]
+                                                ];
+                                        }
+                                    });
+                                })();
+                            }
+                        }
+                    ];
+            }
+        });
+    })();
+}
+/* CJS INTEROP */ if (exports.__esModule && exports.default) { try { Object.defineProperty(exports.default, '__esModule', { value: true }); for (var key in exports) { exports.default[key] = exports[key]; } } catch (_) {}; module.exports = exports.default; }

package/dist/cjs/embed/cohere.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["/Users/kevin/Dev/OpenSource/ai/sensemaking/src/embed/cohere.ts"],"sourcesContent":["import { SenseError } from '../errors.ts';\nimport { fetchWithRetry } from './http.ts';\nimport type { EmbedProvider } from './types.ts';\n\nconst BATCH_CAP = 96;\n\n// Cohere's native /v2/embed: input_type distinguishes doc vs query embeddings, which the\n// OpenAI-compatible shape cannot express.\nexport async function cohereProvider(model: string, url: string | undefined, keyEnv: string | undefined): Promise<EmbedProvider> {\n  const base = (url ?? 'https://api.cohere.com').replace(/\\/+$/, '');\n  const headers: Record<string, string> = { 'content-type': 'application/json' };\n  const key = keyEnv ? process.env[keyEnv] : undefined;\n  if (key) headers.authorization = `Bearer ${key}`;\n\n  async function post(texts: string[], inputType: 'search_document' | 'search_query'): Promise<Float32Array[]> {\n    const res = await fetchWithRetry(`${base}/v2/embed`, { method: 'POST', headers, body: JSON.stringify({ model, input_type: inputType, texts, embedding_types: ['float'] }) });\n    if (!res.ok) throw new SenseError('EMBED_MODEL', `${base}/v2/embed -> HTTP ${res.status}`);\n    const body = (await res.json()) as { embeddings: { float: number[][] } };\n    // Cohere returns one vector per text in order, with no index field to re-sort by; the\n    // count is what a caller mapping positionally still has to be able to trust.\n    const vectors = body.embeddings.float;\n    if (vectors.length !== texts.length) throw new SenseError('EMBED_MODEL', `${base}/v2/embed returned ${vectors.length} embeddings for ${texts.length} inputs`);\n    return vectors.map((v) => Float32Array.from(v));\n  }\n\n  const dims = (await post(['dimension probe'], 'search_query'))[0].length;\n  return { id: `cohere:${base}:${model}`, dims, batchCap: BATCH_CAP, embedDocuments: (texts) => post(texts, 'search_document'), embedQuery: async (text) => (await post([text], 'search_query'))[0] };\n}\n"],"names":["cohereProvider","BATCH_CAP","model","url","keyEnv","base","headers","key","dims","post","texts","inputType","res","body","vectors","fetchWithRetry","method","JSON","stringify","input_type","embedding_types","ok","SenseError","status","json","embeddings","float","length","map","v","Float32Array","from","replace","process","env","undefined","authorization","id","batchCap","embedDocuments","embedQuery","text"],"mappings":";;;;+BAQsBA;;;eAAAA;;;wBARK;sBACI;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAG/B,IAAMC,YAAY;AAIX,SAAeD,eAAeE,KAAa,EAAEC,GAAuB,EAAEC,MAA0B;;YAC/FC,MACAC,SACAC,KAcAC;QAXN,SAAeC,KAAKC,KAAe,EAAEC,SAA6C;;oBAC1EC,KAEAC,MAGAC;;;;4BALM;;gCAAMC,IAAAA,sBAAc,EAAC,AAAC,GAAO,OAALV,MAAK,cAAY;oCAAEW,QAAQ;oCAAQV,SAAAA;oCAASO,MAAMI,KAAKC,SAAS,CAAC;wCAAEhB,OAAAA;wCAAOiB,YAAYR;wCAAWD,OAAAA;wCAAOU,eAAe;4CAAG;;oCAAS;gCAAG;;;4BAApKR,MAAM;4BACZ,IAAI,CAACA,IAAIS,EAAE,EAAE,MAAM,IAAIC,oBAAU,CAAC,eAAe,AAAC,GAA2BV,OAAzBP,MAAK,sBAA+B,OAAXO,IAAIW,MAAM;4BACzE;;gCAAMX,IAAIY,IAAI;;;4BAAtBX,OAAQ;4BACd,sFAAsF;4BACtF,6EAA6E;4BACvEC,UAAUD,KAAKY,UAAU,CAACC,KAAK;4BACrC,IAAIZ,QAAQa,MAAM,KAAKjB,MAAMiB,MAAM,EAAE,MAAM,IAAIL,oBAAU,CAAC,eAAe,AAAC,GAA4BR,OAA1BT,MAAK,uBAAsDK,OAAjCI,QAAQa,MAAM,EAAC,oBAA+B,OAAbjB,MAAMiB,MAAM,EAAC;4BACpJ;;gCAAOb,QAAQc,GAAG,CAAC,SAACC;2CAAMC,aAAaC,IAAI,CAACF;;;;;YAC9C;;;;;oBAdMxB,OAAO,CAACF,gBAAAA,iBAAAA,MAAO,0BAA0B6B,OAAO,CAAC,QAAQ;oBACzD1B,UAAkC;wBAAE,gBAAgB;oBAAmB;oBACvEC,MAAMH,SAAS6B,QAAQC,GAAG,CAAC9B,OAAO,GAAG+B;oBAC3C,IAAI5B,KAAKD,QAAQ8B,aAAa,GAAG,AAAC,UAAa,OAAJ7B;oBAa7B;;wBAAME;4BAAM;2BAAoB;;;oBAAxCD,OAAO,AAAC,aAAgD,CAAC,EAAE,CAACmB,MAAM;oBACxE;;wBAAO;4BAAEU,IAAI,AAAC,UAAiBnC,OAARG,MAAK,KAAS,OAANH;4BAASM,MAAAA;4BAAM8B,UAAUrC;4BAAWsC,gBAAgB,SAAhBA,eAAiB7B;uCAAUD,KAAKC,OAAO;;4BAAoB8B,YAAY,SAAZA,WAAmBC;;;;;gDAAU;;oDAAMhC;wDAAMgC;uDAAO;;;;;oDAAnB,aAAmC,CAAC,EAAE;;;;;;wBAAC;;;;IACpM"}

package/dist/cjs/embed/http.d.cts

@@ -0,0 +1,2 @@
+export declare function fetchWithRetry(url: string, init: RequestInit, baseDelayMs?: number): Promise<Response>;
+export declare function probeReachable(url: string, timeoutMs?: number): Promise<boolean>;

package/dist/cjs/embed/http.d.ts

@@ -0,0 +1,2 @@
+export declare function fetchWithRetry(url: string, init: RequestInit, baseDelayMs?: number): Promise<Response>;
+export declare function probeReachable(url: string, timeoutMs?: number): Promise<boolean>;