sensemaking 0.15.4 → 0.16.0

package/dist/cjs/embed/query.js

@@ -0,0 +1,610 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", {
+    value: true
+});
+function _export(target, all) {
+    for(var name in all)Object.defineProperty(target, name, {
+        enumerable: true,
+        get: Object.getOwnPropertyDescriptor(all, name).get
+    });
+}
+_export(exports, {
+    get embedPending () {
+        return embedPending;
+    },
+    get hasEmbedding () {
+        return hasEmbedding;
+    },
+    get semanticCandidates () {
+        return semanticCandidates;
+    },
+    get similarNotes () {
+        return similarNotes;
+    },
+    get toStore () {
+        return toStore;
+    }
+});
+var _nodepath = require("node:path");
+var _errorsts = require("../errors.js");
+var _embedts = require("../features/embed.js");
+var _progressts = require("../progress.js");
+var _scants = require("../scan.js");
+var _langfitts = require("./langfit.js");
+var _registryts = require("./registry.js");
+function _array_like_to_array(arr, len) {
+    if (len == null || len > arr.length) len = arr.length;
+    for(var i = 0, arr2 = new Array(len); i < len; i++)arr2[i] = arr[i];
+    return arr2;
+}
+function _array_with_holes(arr) {
+    if (Array.isArray(arr)) return arr;
+}
+function _array_without_holes(arr) {
+    if (Array.isArray(arr)) return _array_like_to_array(arr);
+}
+function asyncGeneratorStep(gen, resolve, reject, _next, _throw, key, arg) {
+    try {
+        var info = gen[key](arg);
+        var value = info.value;
+    } catch (error) {
+        reject(error);
+        return;
+    }
+    if (info.done) resolve(value);
+    else Promise.resolve(value).then(_next, _throw);
+}
+function _async_to_generator(fn) {
+    return function() {
+        var self = this, args = arguments;
+        return new Promise(function(resolve, reject) {
+            var gen = fn.apply(self, args);
+            function _next(value) {
+                asyncGeneratorStep(gen, resolve, reject, _next, _throw, "next", value);
+            }
+            function _throw(err) {
+                asyncGeneratorStep(gen, resolve, reject, _next, _throw, "throw", err);
+            }
+            _next(undefined);
+        });
+    };
+}
+function _iterable_to_array(iter) {
+    if (typeof Symbol !== "undefined" && iter[Symbol.iterator] != null || iter["@@iterator"] != null) {
+        return Array.from(iter);
+    }
+}
+function _iterable_to_array_limit(arr, i) {
+    var _i = arr == null ? null : typeof Symbol !== "undefined" && arr[Symbol.iterator] || arr["@@iterator"];
+    if (_i == null) return;
+    var _arr = [];
+    var _n = true;
+    var _d = false;
+    var _s, _e;
+    try {
+        for(_i = _i.call(arr); !(_n = (_s = _i.next()).done); _n = true){
+            _arr.push(_s.value);
+            if (i && _arr.length === i) break;
+        }
+    } catch (err) {
+        _d = true;
+        _e = err;
+    } finally{
+        try {
+            if (!_n && _i["return"] != null) _i["return"]();
+        } finally{
+            if (_d) throw _e;
+        }
+    }
+    return _arr;
+}
+function _non_iterable_rest() {
+    throw new TypeError("Invalid attempt to destructure non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method.");
+}
+function _non_iterable_spread() {
+    throw new TypeError("Invalid attempt to spread non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method.");
+}
+function _sliced_to_array(arr, i) {
+    return _array_with_holes(arr) || _iterable_to_array_limit(arr, i) || _unsupported_iterable_to_array(arr, i) || _non_iterable_rest();
+}
+function _to_consumable_array(arr) {
+    return _array_without_holes(arr) || _iterable_to_array(arr) || _unsupported_iterable_to_array(arr) || _non_iterable_spread();
+}
+function _ts_generator(thisArg, body) {
+    var f, y, t, _ = {
+        label: 0,
+        sent: function() {
+            if (t[0] & 1) throw t[1];
+            return t[1];
+        },
+        trys: [],
+        ops: []
+    }, g = Object.create((typeof Iterator === "function" ? Iterator : Object).prototype), d = Object.defineProperty;
+    return d(g, "next", {
+        value: verb(0)
+    }), d(g, "throw", {
+        value: verb(1)
+    }), d(g, "return", {
+        value: verb(2)
+    }), typeof Symbol === "function" && d(g, Symbol.iterator, {
+        value: function() {
+            return this;
+        }
+    }), g;
+    function verb(n) {
+        return function(v) {
+            return step([
+                n,
+                v
+            ]);
+        };
+    }
+    function step(op) {
+        if (f) throw new TypeError("Generator is already executing.");
+        while(g && (g = 0, op[0] && (_ = 0)), _)try {
+            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
+            if (y = 0, t) op = [
+                op[0] & 2,
+                t.value
+            ];
+            switch(op[0]){
+                case 0:
+                case 1:
+                    t = op;
+                    break;
+                case 4:
+                    _.label++;
+                    return {
+                        value: op[1],
+                        done: false
+                    };
+                case 5:
+                    _.label++;
+                    y = op[1];
+                    op = [
+                        0
+                    ];
+                    continue;
+                case 7:
+                    op = _.ops.pop();
+                    _.trys.pop();
+                    continue;
+                default:
+                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) {
+                        _ = 0;
+                        continue;
+                    }
+                    if (op[0] === 3 && (!t || op[1] > t[0] && op[1] < t[3])) {
+                        _.label = op[1];
+                        break;
+                    }
+                    if (op[0] === 6 && _.label < t[1]) {
+                        _.label = t[1];
+                        t = op;
+                        break;
+                    }
+                    if (t && _.label < t[2]) {
+                        _.label = t[2];
+                        _.ops.push(op);
+                        break;
+                    }
+                    if (t[2]) _.ops.pop();
+                    _.trys.pop();
+                    continue;
+            }
+            op = body.call(thisArg, _);
+        } catch (e) {
+            op = [
+                6,
+                e
+            ];
+            y = 0;
+        } finally{
+            f = t = 0;
+        }
+        if (op[0] & 5) throw op[1];
+        return {
+            value: op[0] ? op[1] : void 0,
+            done: true
+        };
+    }
+}
+function _ts_values(o) {
+    var s = typeof Symbol === "function" && Symbol.iterator, m = s && o[s], i = 0;
+    if (m) {
+        return m.call(o);
+    }
+    if (o && typeof o.length === "number") {
+        return {
+            next: function() {
+                if (o && i >= o.length) {
+                    o = void 0;
+                }
+                return {
+                    value: o && o[i++],
+                    done: !o
+                };
+            }
+        };
+    }
+    throw new TypeError(s ? "Object is not iterable." : "Symbol.iterator is not defined.");
+}
+function _unsupported_iterable_to_array(o, minLen) {
+    if (!o) return;
+    if (typeof o === "string") return _array_like_to_array(o, minLen);
+    var n = Object.prototype.toString.call(o).slice(8, -1);
+    if (n === "Object" && o.constructor) n = o.constructor.name;
+    if (n === "Map" || n === "Set") return Array.from(n);
+    if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _array_like_to_array(o, minLen);
+}
+// Storage lever fixed by the bake-off (BENCHMARKING.md): int8 at 256 dims is
+// quality-free vs f32-512 when fused. Queries stay f32 at the same dims.
+var STORE_DIMS = 256;
+// Seed chunks that participate in a `related` scan; see similarNotes for the measurement.
+var TARGET_CHUNK_CAP = 16;
+function toStore(full, dims, int8) {
+    var v = new Float32Array(dims);
+    var norm = 0;
+    for(var d = 0; d < dims; d++)norm += full[d] * full[d];
+    norm = Math.sqrt(norm) + 1e-32;
+    for(var d1 = 0; d1 < dims; d1++)v[d1] = full[d1] / norm;
+    if (!int8) return {
+        v: v,
+        scale: 1
+    };
+    var max = 0;
+    for(var d2 = 0; d2 < dims; d2++)max = Math.max(max, Math.abs(v[d2]));
+    return {
+        v: v,
+        scale: max / 127 || 1
+    };
+}
+function embedPending(db, cfg, baseDir) {
+    return _async_to_generator(function() {
+        var _loop, provider, dirty, storeDims, byPath, _iteratorNormalCompletion, _didIteratorError, _iteratorError, _iterator, _step, row, _byPath_get, list, jobs, _iteratorNormalCompletion1, _didIteratorError1, _iteratorError1, _iterator1, _step1, _step_value, path, chunkIdxs, chunks, _iteratorNormalCompletion2, _didIteratorError2, _iteratorError2, _iterator2, _step2, idx, update, report, i;
+        return _ts_generator(this, function(_state) {
+            switch(_state.label){
+                case 0:
+                    _loop = function(i) {
+                        var batch, vectors;
+                        return _ts_generator(this, function(_state) {
+                            switch(_state.label){
+                                case 0:
+                                    batch = jobs.slice(i, i + provider.batchCap);
+                                    return [
+                                        4,
+                                        provider.embedDocuments(batch.map(function(j) {
+                                            return j.text;
+                                        }))
+                                    ];
+                                case 1:
+                                    vectors = _state.sent();
+                                    db.exec('BEGIN');
+                                    try {
+                                        batch.forEach(function(job, j) {
+                                            var _toStore = toStore(vectors[j], storeDims, true), v = _toStore.v, scale = _toStore.scale;
+                                            var q = new Int8Array(storeDims);
+                                            for(var d = 0; d < storeDims; d++)q[d] = Math.round(v[d] / scale);
+                                            update.run(scale, Buffer.from(q.buffer), job.path, job.chunk);
+                                        });
+                                        db.exec('COMMIT');
+                                    } catch (err) {
+                                        db.exec('ROLLBACK');
+                                        throw err;
+                                    }
+                                    report.tick(Math.min(i + provider.batchCap, jobs.length));
+                                    return [
+                                        2
+                                    ];
+                            }
+                        });
+                    };
+                    return [
+                        4,
+                        (0, _registryts.getProvider)(cfg)
+                    ];
+                case 1:
+                    provider = _state.sent();
+                    dirty = db.prepare('SELECT "path", chunk FROM embeddings WHERE vector IS NULL ORDER BY "path", chunk').all();
+                    if (dirty.length === 0) return [
+                        2
+                    ];
+                    storeDims = Math.min(STORE_DIMS, provider.dims);
+                    byPath = new Map();
+                    _iteratorNormalCompletion = true, _didIteratorError = false, _iteratorError = undefined;
+                    try {
+                        for(_iterator = dirty[Symbol.iterator](); !(_iteratorNormalCompletion = (_step = _iterator.next()).done); _iteratorNormalCompletion = true){
+                            row = _step.value;
+                            ;
+                            list = (_byPath_get = byPath.get(row.path)) !== null && _byPath_get !== void 0 ? _byPath_get : [];
+                            list.push(row.chunk);
+                            byPath.set(row.path, list);
+                        }
+                    } catch (err) {
+                        _didIteratorError = true;
+                        _iteratorError = err;
+                    } finally{
+                        try {
+                            if (!_iteratorNormalCompletion && _iterator.return != null) {
+                                _iterator.return();
+                            }
+                        } finally{
+                            if (_didIteratorError) {
+                                throw _iteratorError;
+                            }
+                        }
+                    }
+                    jobs = [];
+                    _iteratorNormalCompletion1 = true, _didIteratorError1 = false, _iteratorError1 = undefined;
+                    try {
+                        for(_iterator1 = byPath[Symbol.iterator](); !(_iteratorNormalCompletion1 = (_step1 = _iterator1.next()).done); _iteratorNormalCompletion1 = true){
+                            _step_value = _sliced_to_array(_step1.value, 2), path = _step_value[0], chunkIdxs = _step_value[1];
+                            chunks = void 0;
+                            try {
+                                // presets/embed are irrelevant here -- re-deriving chunk text for a doc that already
+                                // has embeddings rows means the tree had an embedding model at reconcile time.
+                                chunks = (0, _scants.parseFile)({
+                                    relPath: path,
+                                    absPath: (0, _nodepath.join)(baseDir, path),
+                                    mtimeMs: 0,
+                                    ctimeMs: 0,
+                                    size: 0,
+                                    presets: [],
+                                    embed: true
+                                }, [
+                                    _embedts.embed
+                                ]).doc.extracted.embed;
+                            } catch (unused) {
+                                continue; // vanished since reconcile; the next reconcile removes its rows
+                            }
+                            _iteratorNormalCompletion2 = true, _didIteratorError2 = false, _iteratorError2 = undefined;
+                            try {
+                                for(_iterator2 = chunkIdxs[Symbol.iterator](); !(_iteratorNormalCompletion2 = (_step2 = _iterator2.next()).done); _iteratorNormalCompletion2 = true){
+                                    idx = _step2.value;
+                                    if (chunks[idx]) jobs.push({
+                                        path: path,
+                                        chunk: idx,
+                                        text: chunks[idx].text
+                                    });
+                                }
+                            } catch (err) {
+                                _didIteratorError2 = true;
+                                _iteratorError2 = err;
+                            } finally{
+                                try {
+                                    if (!_iteratorNormalCompletion2 && _iterator2.return != null) {
+                                        _iterator2.return();
+                                    }
+                                } finally{
+                                    if (_didIteratorError2) {
+                                        throw _iteratorError2;
+                                    }
+                                }
+                            }
+                        }
+                    } catch (err) {
+                        _didIteratorError1 = true;
+                        _iteratorError1 = err;
+                    } finally{
+                        try {
+                            if (!_iteratorNormalCompletion1 && _iterator1.return != null) {
+                                _iterator1.return();
+                            }
+                        } finally{
+                            if (_didIteratorError1) {
+                                throw _iteratorError1;
+                            }
+                        }
+                    }
+                    // Over the exact texts about to be embedded, before any of them are: a mismatch fails
+                    // this run loudly instead of quietly storing vectors from the wrong model.
+                    return [
+                        4,
+                        (0, _langfitts.checkLanguageFit)(db, provider, jobs.map(function(j) {
+                            return j.text;
+                        }))
+                    ];
+                case 2:
+                    _state.sent();
+                    update = db.prepare('UPDATE embeddings SET scale = ?, vector = ? WHERE "path" = ? AND chunk = ?');
+                    // The lazy build is the one long silence a first search hits (measured 23s at
+                    // 26k notes); progress makes it distinguishable from a hang.
+                    report = (0, _progressts.progress)('embedding chunks', jobs.length);
+                    i = 0;
+                    _state.label = 3;
+                case 3:
+                    if (!(i < jobs.length)) return [
+                        3,
+                        6
+                    ];
+                    return [
+                        5,
+                        _ts_values(_loop(i))
+                    ];
+                case 4:
+                    _state.sent();
+                    _state.label = 5;
+                case 5:
+                    i += provider.batchCap;
+                    return [
+                        3,
+                        3
+                    ];
+                case 6:
+                    report.finish();
+                    return [
+                        2
+                    ];
+            }
+        });
+    })();
+}
+// Dequantised int8 dot products land a little either side of a true cosine, so an identical
+// pair prints 1.001 and undermines a column whose whole job is being a bounded number.
+function asCosine(score) {
+    return Math.round(Math.min(1, Math.max(-1, score)) * 1000) / 1000;
+}
+function semanticCandidates(db, cfg, terms, fetch, allowed) {
+    return _async_to_generator(function() {
+        var _terms_match, baseDir, provider, storeDims, text, _toStore, qv, rows, best, _iteratorNormalCompletion, _didIteratorError, _iteratorError, _iterator, _step, row, q, dot, d, score, existing;
+        return _ts_generator(this, function(_state) {
+            switch(_state.label){
+                case 0:
+                    baseDir = cfg.baseDir;
+                    if (!baseDir) throw new _errorsts.SenseError('EMBED_MODEL', 'semantic expansion needs a config with baseDir (use loadConfig/open)');
+                    return [
+                        4,
+                        embedPending(db, cfg, baseDir)
+                    ];
+                case 1:
+                    _state.sent();
+                    return [
+                        4,
+                        (0, _registryts.getProvider)(cfg)
+                    ];
+                case 2:
+                    provider = _state.sent();
+                    storeDims = Math.min(STORE_DIMS, provider.dims);
+                    text = ((_terms_match = 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"gu"))) !== null && _terms_match !== void 0 ? _terms_match : []).filter(function(t) {
+                        return ![
+                            'AND',
+                            'OR',
+                            'NOT',
+                            'NEAR'
+                        ].includes(t);
+                    }).join(' ');
+                    return [
+                        4,
+                        provider.embedQuery(text)
+                    ];
+                case 3:
+                    _toStore = toStore.apply(void 0, [
+                        _state.sent(),
+                        storeDims,
+                        false
+                    ]), qv = _toStore.v;
+                    rows = db.prepare('SELECT "path", start_line, end_line, scale, vector FROM embeddings WHERE vector IS NOT NULL').all();
+                    best = new Map();
+                    _iteratorNormalCompletion = true, _didIteratorError = false, _iteratorError = undefined;
+                    try {
+                        for(_iterator = rows[Symbol.iterator](); !(_iteratorNormalCompletion = (_step = _iterator.next()).done); _iteratorNormalCompletion = true){
+                            row = _step.value;
+                            if (allowed && !allowed.has(row.path)) continue;
+                            q = new Int8Array(row.vector.buffer, row.vector.byteOffset, Math.min(storeDims, row.vector.byteLength));
+                            dot = 0;
+                            for(d = 0; d < q.length; d++)dot += q[d] * qv[d];
+                            score = dot * row.scale;
+                            existing = best.get(row.path);
+                            if (!existing || score > existing.score) best.set(row.path, {
+                                score: score,
+                                lines: "L".concat(row.start_line, "-").concat(row.end_line)
+                            });
+                        }
+                    } catch (err) {
+                        _didIteratorError = true;
+                        _iteratorError = err;
+                    } finally{
+                        try {
+                            if (!_iteratorNormalCompletion && _iterator.return != null) {
+                                _iterator.return();
+                            }
+                        } finally{
+                            if (_didIteratorError) {
+                                throw _iteratorError;
+                            }
+                        }
+                    }
+                    return [
+                        2,
+                        _to_consumable_array(best.entries()).sort(function(a, b) {
+                            return b[1].score - a[1].score;
+                        }).slice(0, fetch).map(function(param) {
+                            var _param = _sliced_to_array(param, 2), path = _param[0], b = _param[1];
+                            return {
+                                path: path,
+                                lines: b.lines,
+                                similarity: asCosine(b.score)
+                            };
+                        })
+                    ];
+            }
+        });
+    })();
+}
+function hasEmbedding(db, path) {
+    var row = db.prepare('SELECT 1 AS ok FROM embeddings WHERE "path" = ? AND vector IS NOT NULL LIMIT 1').get(path);
+    return row !== undefined;
+}
+function similarNotes(db, _cfg, path, opts) {
+    // Cost is target_chunks x stored_chunks, so a heading-dense seed multiplies a full-corpus
+    // scan (12.7s at 201 chunks/note). Sample evenly, so late sections still get a vote.
+    var targetRows = db.prepare('SELECT scale, vector FROM embeddings WHERE "path" = ? AND vector IS NOT NULL ORDER BY chunk').all(path);
+    if (targetRows.length === 0) return [];
+    var step = Math.max(1, Math.ceil(targetRows.length / TARGET_CHUNK_CAP));
+    var target = targetRows.filter(function(_, i) {
+        return i % step === 0;
+    }).map(function(row) {
+        return {
+            v: new Int8Array(row.vector.buffer, row.vector.byteOffset, row.vector.byteLength),
+            scale: row.scale
+        };
+    });
+    var rows = db.prepare('SELECT "path", scale, vector FROM embeddings WHERE vector IS NOT NULL').all();
+    var best = new Map();
+    var _iteratorNormalCompletion = true, _didIteratorError = false, _iteratorError = undefined;
+    try {
+        for(var _iterator = rows[Symbol.iterator](), _step; !(_iteratorNormalCompletion = (_step = _iterator.next()).done); _iteratorNormalCompletion = true){
+            var row = _step.value;
+            if (row.path === path || opts.exclude.has(row.path) || opts.allowed && !opts.allowed.has(row.path)) continue;
+            var other = new Int8Array(row.vector.buffer, row.vector.byteOffset, row.vector.byteLength);
+            var _iteratorNormalCompletion1 = true, _didIteratorError1 = false, _iteratorError1 = undefined;
+            try {
+                for(var _iterator1 = target[Symbol.iterator](), _step1; !(_iteratorNormalCompletion1 = (_step1 = _iterator1.next()).done); _iteratorNormalCompletion1 = true){
+                    var t = _step1.value;
+                    var dot = 0;
+                    var len = Math.min(t.v.length, other.length);
+                    for(var d = 0; d < len; d++)dot += t.v[d] * other[d];
+                    var score = dot * t.scale * row.scale;
+                    var existing = best.get(row.path);
+                    if (existing === undefined || score > existing) best.set(row.path, score);
+                }
+            } catch (err) {
+                _didIteratorError1 = true;
+                _iteratorError1 = err;
+            } finally{
+                try {
+                    if (!_iteratorNormalCompletion1 && _iterator1.return != null) {
+                        _iterator1.return();
+                    }
+                } finally{
+                    if (_didIteratorError1) {
+                        throw _iteratorError1;
+                    }
+                }
+            }
+        }
+    } catch (err) {
+        _didIteratorError = true;
+        _iteratorError = err;
+    } finally{
+        try {
+            if (!_iteratorNormalCompletion && _iterator.return != null) {
+                _iterator.return();
+            }
+        } finally{
+            if (_didIteratorError) {
+                throw _iteratorError;
+            }
+        }
+    }
+    return _to_consumable_array(best.entries()).sort(function(a, b) {
+        return b[1] - a[1];
+    }).slice(0, opts.k).map(function(param) {
+        var _param = _sliced_to_array(param, 2), p = _param[0], score = _param[1];
+        return {
+            path: p,
+            similarity: asCosine(score)
+        };
+    });
+}
+/* CJS INTEROP */ if (exports.__esModule && exports.default) { try { Object.defineProperty(exports.default, '__esModule', { value: true }); for (var key in exports) { exports.default[key] = exports[key]; } } catch (_) {}; module.exports = exports.default; }