sdf-parser 4.0.2 → 5.0.2

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Files changed (20) hide show
  1. package/README.md +8 -8
  2. package/lib/index.js +239 -0
  3. package/package.json +25 -16
  4. package/src/__tests__/__snapshots__/getEntriesBoundaries.test.js.snap +10 -0
  5. package/src/__tests__/checkOptions.test.js +57 -0
  6. package/src/__tests__/checkUndefined.test.js +24 -0
  7. package/src/__tests__/getEntriesBoundaries.test.js +33 -0
  8. package/src/__tests__/index.test.js +76 -0
  9. package/src/__tests__/notWellFormatted.test.js +14 -0
  10. package/src/__tests__/stream.test.js +98 -0
  11. package/src/__tests__/test.sdf +8707 -0
  12. package/src/__tests__/test1.sdf +38 -0
  13. package/src/__tests__/test2.sdf +498 -0
  14. package/src/__tests__/test4.sdf +37 -0
  15. package/src/getEntriesBoundaries.js +21 -0
  16. package/src/index.js +2 -7
  17. package/src/parse.js +31 -13
  18. package/src/stream.browser.js +2 -2
  19. package/src/stream.js +10 -16
  20. package/History.md +0 -100
package/src/stream.browser.js CHANGED
@@ -1,3 +1,3 @@
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- 'use strict';
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+ const empty = {};
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- module.exports = {};
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+ export default empty;
package/src/stream.js CHANGED
@@ -1,22 +1,21 @@
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- 'use strict';
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+ import pipeline from 'pumpify';
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+ import split2 from 'split2';
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+ import through2 from 'through2';
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+ import filter from 'through2-filter';
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- const pipeline = require('pumpify');
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- const split2 = require('split2');
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- const through2 = require('through2');
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- const filter = require('through2-filter');
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-
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- const parse = require('./parse');
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+ import { parse } from './parse';
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  const filterStream = filter.bind(null, { objectMode: true });
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+
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  function filterCb(chunk) {
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  return chunk.length > 1 && chunk.trim().length > 1;
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  }
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- function entries() {
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+ export function entries() {
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  return pipeline.obj(
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  split2(/\r?\n\${4}.*\r?\n/),
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  filterStream(filterCb),
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- through2({ objectMode: true }, function (value, encoding, callback) {
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+ through2({ objectMode: true }, function process(value, encoding, callback) {
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  const eol = value.includes('\r\n') ? '\r\n' : '\n';
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  this.push(`${value + eol}$$$$${eol}`);
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  callback();
@@ -24,10 +23,10 @@ function entries() {
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  );
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  }
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- function molecules(options) {
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+ export function molecules(options) {
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  return pipeline.obj(
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  entries(),
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- through2({ objectMode: true }, function (value, encoding, callback) {
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+ through2({ objectMode: true }, function process(value, encoding, callback) {
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  try {
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  const parsed = parse(value, options);
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  if (parsed.molecules.length === 1) {
@@ -44,8 +43,3 @@ function molecules(options) {
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  }),
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  );
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  }
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-
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- module.exports = {
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- entries,
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- molecules,
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- };
package/History.md DELETED
@@ -1,100 +0,0 @@
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- ## [4.0.2](https://github.com/cheminfo-js/sdf-parser/compare/v4.0.1...v4.0.2) (2020-06-27)
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-
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- ## [4.0.1](https://github.com/cheminfo-js/sdf-parser/compare/v4.0.0...v4.0.1) (2019-06-12)
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-
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- ### Bug Fixes
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-
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- * back to pumpify ([387c3eb](https://github.com/cheminfo-js/sdf-parser/commit/387c3eb))
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- # [4.0.0](https://github.com/cheminfo-js/sdf-parser/compare/v3.1.0...v4.0.0) (2019-06-12)
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- ### Bug Fixes
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- * use pumpify instead of multipipe ([aed47fd](https://github.com/cheminfo-js/sdf-parser/commit/aed47fd))
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-
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-
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- ### chore
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-
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- * remove bower.json ([2cc05c5](https://github.com/cheminfo-js/sdf-parser/commit/2cc05c5))
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- * remove dist directory ([eba83f7](https://github.com/cheminfo-js/sdf-parser/commit/eba83f7))
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- ### Features
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-
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- * add support for stream async iteration ([f41105e](https://github.com/cheminfo-js/sdf-parser/commit/f41105e))
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-
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- ### BREAKING CHANGES
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-
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- * The "dist" directory is no longer built and published.
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- * Bower is no longer supported.
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- # [3.1.0](https://github.com/cheminfo-js/sdf-parser/compare/v3.0.1...v3.1.0) (2018-01-26)
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- ## [3.0.1](https://github.com/cheminfo-js/sdf-parser/compare/v3.0.0...v3.0.1) (2018-01-06)
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- # [3.0.0](https://github.com/cheminfo-js/sdf-parser/compare/v2.3.1...v3.0.0) (2018-01-05)
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- ### Features
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-
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- * add stream functions ([ac7ed88](https://github.com/cheminfo-js/sdf-parser/commit/ac7ed88))
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- ## [2.3.1](https://github.com/cheminfo-js/sdf-parser/compare/v2.3.0...v2.3.1) (2017-07-04)
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- # [2.3.0](https://github.com/cheminfo-js/sdf-parser/compare/v2.2.2...v2.3.0) (2017-07-04)
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- ## [2.2.2](https://github.com/cheminfo-js/sdf-parser/compare/v2.2.1...v2.2.2) (2016-06-23)
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- ## [2.2.1](https://github.com/cheminfo-js/sdf-parser/compare/v2.2.0...v2.2.1) (2016-06-07)
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- # [2.2.0](https://github.com/cheminfo-js/sdf-parser/compare/v2.1.1...v2.2.0) (2016-06-07)
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- ## [2.1.1](https://github.com/cheminfo-js/sdf-parser/compare/v2.1.0...v2.1.1) (2016-06-06)
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- # [2.1.0](https://github.com/cheminfo-js/sdf-parser/compare/v2.0.1...v2.1.0) (2016-06-06)
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- ## [2.0.1](https://github.com/cheminfo-js/sdf-parser/compare/v2.0.0...v2.0.1) (2016-05-21)
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- # [2.0.0](https://github.com/cheminfo-js/sdf-parser/compare/v1.0.1...v2.0.0) (2016-05-21)
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- ## [1.0.1](https://github.com/cheminfo-js/sdf-parser/compare/v1.0.0...v1.0.1) (2015-06-10)
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- # 1.0.0 (2015-02-13)
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