scoutline 0.19.7 → 0.21.0

package/dist/capabilities/science.js

@@ -0,0 +1,110 @@
+/**
+ * Science Capability Contract (DESIGN D1; PRD AC-10d).
+ *
+ * One capability file, house shape mirroring `search.ts`. Declares the
+ * Provider-neutral meaning shared by every science supplier: the control
+ * record, search/get request shapes, the normalized `ScienceWork` result,
+ * the supplier-partitioned cache identity, and the three capability
+ * interfaces (search/get/cite). This ticket ships ONLY the contract — no
+ * Provider, transport, or Adapter code lives here.
+ *
+ * Interfaces are compile-time only, so the validate() grammars are
+ * implemented as exported pure helpers (`validateScienceSearchRequest`,
+ * `validateScienceGetRequest`, `parseScienceIdentifier`) that the
+ * interfaces' validate() methods delegate to.
+ *
+ * Scope rulings encoded here:
+ *   - `year` accepts ONLY the closed forms "2020" | "2018:2022"
+ *     (PRD AC-7/AC-7b). Empty, malformed, and reversed ranges throw.
+ *   - The shared validator judges ONLY `query` + `year`. `author`,
+ *     `venue`, and `type` pass through unjudged — per-control
+ *     accept/reject is the Adapter concern, and the `--type` union
+ *     vocabulary (including `component` rejection) lives at command
+ *     parse, never here.
+ *   - Identifier grammar is BARE forms only: DOI `^10\.\d{4,9}/`,
+ *     numeric PMID, arXiv `\d{4}\.\d{4,5}` plus the legacy
+ *     `archive/number` form (e.g. `cs/0501001`). A `doi:` prefix is not
+ *     one of the closed forms. Parsed once at the command layer.
+ */
+import { ValidationError } from "../lib/errors.js";
+// ---------------------------------------------------------------------------
+// Suppliers
+// ---------------------------------------------------------------------------
+/**
+ * The five science supplier ids, in the design listing order. This is the
+ * PROVIDER_IDS insertion order, NOT the fan-out arm order (the
+ * openalex-first arm ordering is an executor concern).
+ */
+export const SCIENCE_SUPPLIER_IDS = Object.freeze(["arxiv", "openalex", "crossref", "pubmed", "europepmc"]);
+// ---------------------------------------------------------------------------
+// Year grammar (PRD AC-7/AC-7b)
+// ---------------------------------------------------------------------------
+/** Single year "2020" or closed range "2018:2022"; nothing else. */
+const SCIENCE_YEAR_PATTERN = /^(\d{4})(?::(\d{4}))?$/;
+function validateScienceYear(year) {
+    const match = SCIENCE_YEAR_PATTERN.exec(year);
+    if (!match) {
+        throw new ValidationError(`Invalid year "${year}": expected a year "2020" or closed range "2018:2022"`);
+    }
+    const from = match[1];
+    const to = match[2];
+    if (to !== undefined && Number(from) > Number(to)) {
+        throw new ValidationError(`Invalid year range "${year}": the start year must not exceed the end year`);
+    }
+}
+/** Bare DOI: `10.` registrant (4-9 digits) then a slash suffix. */
+const BARE_DOI_PATTERN = /^10\.\d{4,9}\/.+$/;
+/** Modern arXiv id: YYMM.NNNNN (4-digit head, 4-5 digit tail). */
+const ARXIV_ID_PATTERN = /^\d{4}\.\d{4,5}$/;
+/** Legacy arXiv id: archive/YYMMNNN (e.g. `cs/0501001`). */
+const ARXIV_LEGACY_PATTERN = /^[a-z][a-z-]*\/\d{7}$/;
+/** Numeric PMID. */
+const PMID_PATTERN = /^\d+$/;
+/**
+ * Classify a bare science identifier. Returns `"doi"`, `"pmid"`, or
+ * `"arxiv"` when the identifier matches one of the closed forms, null
+ * otherwise. Bare forms only — prefixed input (e.g. `doi:10.1038/…`)
+ * returns null. Parsed once at the command layer; routing to suppliers
+ * serving that id type happens downstream.
+ */
+export function parseScienceIdentifier(identifier) {
+    if (BARE_DOI_PATTERN.test(identifier))
+        return "doi";
+    if (ARXIV_ID_PATTERN.test(identifier))
+        return "arxiv";
+    if (ARXIV_LEGACY_PATTERN.test(identifier))
+        return "arxiv";
+    if (PMID_PATTERN.test(identifier))
+        return "pmid";
+    return null;
+}
+// ---------------------------------------------------------------------------
+// Shared validate helpers
+// ---------------------------------------------------------------------------
+/**
+ * Validate a science search request. Judges only the `query` (at least
+ * one non-whitespace character) and the `year` control grammar.
+ * `author`, `venue`, and `type` pass through unjudged — per-control
+ * accept/reject is the Adapter concern.
+ */
+export function validateScienceSearchRequest(request) {
+    if (typeof request.query !== "string" || request.query.trim() === "") {
+        throw new ValidationError("Query must contain at least one non-whitespace character");
+    }
+    const year = request.controls?.year;
+    if (year !== undefined) {
+        validateScienceYear(year);
+    }
+}
+/**
+ * Validate a science get request. The identifier must be one of the bare
+ * closed forms (`parseScienceIdentifier` non-null); anything outside the
+ * grammar throws `ValidationError`.
+ */
+export function validateScienceGetRequest(request) {
+    if (typeof request.identifier !== "string" ||
+        parseScienceIdentifier(request.identifier) === null) {
+        throw new ValidationError(`Invalid identifier: expected a bare DOI, numeric PMID, or arXiv id`);
+    }
+}
+//# sourceMappingURL=science.js.map

package/dist/capabilities/science.js.map

@@ -0,0 +1 @@
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package/dist/command-invocation.d.ts

@@ -17,6 +17,18 @@ export interface DataCommandResult<T = unknown> {
     readonly data: T;
     readonly presentations?: CommandPresentations;
     readonly exitCode?: number;
+    /**
+     * Pre-projection (pre-`--fields`) rows for capabilities whose journal
+     * skeleton must preserve url+title identities even when the user
+     * projects away those fields in the command output.
+     *
+     * Only the search command populates this; every other command leaves
+     * it absent (undefined is not `unknown`-assignable but it's optional).
+     */
+    readonly rawRows?: readonly {
+        url?: string;
+        title?: string;
+    }[];
 }
 export interface TextCommandResult {
     readonly kind: "text";
@@ -74,5 +86,5 @@ export type SaveHook = (context: SaveHookContext) => Promise<void>;
  * The trailing newline is appended at the Node Adapter boundary, not
  * here, so `invokeCommand` itself is process-effect-free.
  */
-export declare function invokeCommand(adapter: CommandInvocationAdapter, behavior: (context: CommandContext) => Promise<CommandResult>, outputMode: OutputMode, now?: () => number, secrets?: string[], save?: SaveHook): Promise<number>;
+export declare function invokeCommand(adapter: CommandInvocationAdapter, behavior: (context: CommandContext) => Promise<CommandResult>, outputMode: OutputMode, now?: () => number, secrets?: string[], save?: SaveHook, journal?: SaveHook): Promise<number>;
 //# sourceMappingURL=command-invocation.d.ts.map

package/dist/command-invocation.d.ts.map

@@ -1 +1 @@
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package/dist/command-invocation.js

@@ -36,6 +36,11 @@ function isTextOutputMode(mode) {
  * credential-shaped fields), so legitimate output is unchanged.
  */
 function selectOutput(result, outputMode, now, secrets) {
+    if (outputMode === "json" || outputMode === "pretty") {
+        const data = result.kind === "text" ? result.text : result.data;
+        const redactedData = redactSecrets(data, secrets);
+        return formatSuccessOutput(redactedData, outputMode, now);
+    }
     if (result.kind === "text") {
         return redactSecrets(result.text, secrets);
     }
@@ -63,7 +68,7 @@ function selectOutput(result, outputMode, now, secrets) {
  * The trailing newline is appended at the Node Adapter boundary, not
  * here, so `invokeCommand` itself is process-effect-free.
  */
-export async function invokeCommand(adapter, behavior, outputMode, now = Date.now, secrets, save) {
+export async function invokeCommand(adapter, behavior, outputMode, now = Date.now, secrets, save, journal) {
     const notices = [];
     // F1: resolve secrets once and redact at BOTH the success-output and
     // error boundaries. Previously only the error path consumed `secrets`;
@@ -86,7 +91,44 @@ export async function invokeCommand(adapter, behavior, outputMode, now = Date.no
         // existing catch below (notices flushed, one error envelope, stdout
         // suppressed). With no hook this is a no-op.
         if (save !== undefined) {
-            await save({ result, resolvedSecrets, now, notice: context.notice });
+            // Cluster F (cubic P2): capture the save failure but don't rethrow
+            // yet — the always-on journal hook must still run, so a
+            // provider-verified run leaves a journal row recording the attempt
+            // even when saving the artifact fails.
+            let saveThrew = false;
+            let saveError;
+            try {
+                await save({ result, resolvedSecrets, now, notice: context.notice });
+            }
+            catch (error) {
+                saveThrew = true;
+                saveError = error;
+            }
+            // History-journal merge T2a: the always-on journal hook runs BESIDE
+            // the save hook at the same seam — AFTER it, so the save hook has
+            // already stamped its requestId into the shared capture cell for the
+            // saveRef cross-link. Rethrow precedence:
+            // - save succeeded, journal failed → rethrow (unchanged contract:
+            //   rides the catch below — notices, one error envelope, no stdout).
+            // - save failed → the save error rethrows below; a journal error
+            //   would only mask it, so it degrades to a stderr notice instead.
+            if (journal !== undefined) {
+                try {
+                    await journal({ result, resolvedSecrets, now, notice: context.notice });
+                }
+                catch (journalError) {
+                    if (!saveThrew) {
+                        throw journalError;
+                    }
+                    context.notice("journal write failed after save failure");
+                }
+            }
+            if (saveThrew) {
+                throw saveError;
+            }
+        }
+        else if (journal !== undefined) {
+            await journal({ result, resolvedSecrets, now, notice: context.notice });
         }
     }
     catch (error) {

package/dist/command-invocation.js.map

@@ -1 +1 @@
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package/dist/commands/archive.d.ts

@@ -0,0 +1,178 @@
+/**
+ * archive command — Internet Archive Wayback Machine integration (ADR-0006).
+ *
+ * Implements temporal archival intelligence:
+ *
+ *   - `archive cdx <url-or-pattern> [--from TS] [--to TS] [--status 200] [--limit N]`:
+ *     Queries the CDX Server API to enumerate historical captures.
+ *   - `archive get <url> [--at <timestamp|best>] [--raw]`:
+ *     Replays a capture using Wayback's `id_` verbatim mode (toolbar stripped),
+ *     auto-resolving the best snapshot via the Availability API when omitted.
+ *   - `archive diff <url> --since <date|duration>`:
+ *     One-shot snapshot-vs-live comparison: replays the capture at or
+ *     before `--since` (CDX-selected, never nearest-after) and diffs its
+ *     sections against the live page (watch-temporal-diff lane B, T3).
+ *
+ * Credential-free (public, keyless API) dispatched before config load.
+ */
+import type { CommandResult } from "../command-invocation.js";
+import type { OutputMode } from "../lib/output.js";
+import type { HandlerDependencies } from "../index.js";
+export declare const ARCHIVE_HELP: string;
+export declare const WAYBACK_CDX_ENDPOINT = "https://web.archive.org/cdx/search/cdx";
+export declare const WAYBACK_AVAILABILITY_ENDPOINT = "https://archive.org/wayback/available";
+export declare const DEFAULT_ARCHIVE_TIMEOUT_MS = 30000;
+export interface ArchiveCapture {
+    readonly timestamp: string;
+    readonly statusCode: number;
+    readonly length: number;
+    readonly digest: string;
+    readonly originalUrl: string;
+}
+export interface ArchiveCdxReport {
+    readonly schemaVersion: 1;
+    readonly url: string;
+    readonly total: number;
+    readonly captures: readonly ArchiveCapture[];
+}
+export interface ArchiveGetReport {
+    readonly schemaVersion: 1;
+    readonly url: string;
+    readonly snapshotTimestamp: string;
+    readonly archiveUrl: string;
+    readonly statusCode: number;
+    readonly bytes: number;
+    readonly contentType?: string;
+    readonly content?: string;
+}
+export interface ArchiveDiffOptions {
+    readonly since?: string;
+    readonly timeout?: number;
+}
+export interface ArchiveDiffReport {
+    readonly schemaVersion: 1;
+    readonly url: string;
+    readonly asOf: string;
+    readonly snapshotTimestamp: string;
+    readonly finalUrl: string;
+    readonly added: readonly string[];
+    readonly removed: readonly string[];
+    readonly changed: readonly string[];
+    readonly hashOnly: boolean;
+    readonly moved: boolean;
+}
+export interface ArchiveCdxOptions {
+    readonly from?: string;
+    readonly to?: string;
+    readonly status?: string;
+    readonly limit?: number;
+    readonly timeout?: number;
+}
+export interface ArchiveGetOptions {
+    readonly at?: string;
+    readonly raw?: boolean;
+    readonly timeout?: number;
+}
+/**
+ * Fetch with exponential backoff on HTTP 429/503 (rate limiting).
+ */
+export declare function fetchWithArchiveBackoff<T = Response>(url: string, options?: {
+    timeout?: number;
+    headers?: Record<string, string>;
+    sleep?: (ms: number) => Promise<void>;
+}, consumer?: (res: Response) => Promise<T>): Promise<T>;
+/**
+ * Enumerate captures via CDX server.
+ */
+export declare function executeArchiveCdx(urlOrPattern: string, options?: ArchiveCdxOptions, dependencies?: {
+    sleep?: (ms: number) => Promise<void>;
+    cdxEndpoint?: string;
+}): Promise<ArchiveCdxReport>;
+/**
+ * Resolve snapshot timestamp via Wayback Availability API.
+ */
+export declare function resolveAvailableSnapshot(url: string, timestampHint?: string, dependencies?: {
+    sleep?: (ms: number) => Promise<void>;
+    timeout?: number;
+    availabilityEndpoint?: string;
+}): Promise<{
+    timestamp: string;
+    archiveUrl: string;
+}>;
+/**
+ * Fetch raw capture content via Wayback's `id_` verbatim mode.
+ */
+export declare function executeArchiveGet(url: string, options?: ArchiveGetOptions, dependencies?: {
+    sleep?: (ms: number) => Promise<void>;
+    availabilityEndpoint?: string;
+    replayBaseUrl?: string;
+}): Promise<ArchiveGetReport>;
+/**
+ * Invocation-seam wrapper for archive cdx.
+ */
+export declare function archiveCdxCommand(urlOrPattern: string, options?: ArchiveCdxOptions): Promise<CommandResult<ArchiveCdxReport>>;
+/**
+ * Invocation-seam wrapper for archive get.
+ */
+export declare function archiveGetCommand(url: string, options?: ArchiveGetOptions): Promise<CommandResult<ArchiveGetReport>>;
+export declare function resolveSinceInstant(since: string, now?: () => number): {
+    atMs: number;
+    asOf: string;
+};
+/** Pull the charset parameter out of a Content-Type header, if present. */
+export declare function charsetFromContentType(contentType: string | undefined): string | undefined;
+/**
+ * Fetch the LIVE side: manual redirect loop (≤10 hops, 303/301/302
+ * downgrade semantics per fetch), 50MB bounded read (never
+ * `arrayBuffer()`), browser UA, AbortController timeout. Returns the
+ * final body plus `moved` — true only when the chain contains a
+ * permanent (301/308) hop AND the final URL differs from the request.
+ */
+export declare function fetchLiveDocument(url: string, timeoutMs: number): Promise<{
+    raw: Buffer;
+    finalUrl: string;
+    moved: boolean;
+    contentType?: string;
+    statusCode: number;
+}>;
+/**
+ * One-shot snapshot-vs-live section diff (watch-temporal-diff lane B, T3).
+ *
+ * Archive side = snapshot RAW bytes via `id_` replay; live side = real
+ * HTTP fetch. Sections extracted from each side's bytes under its own
+ * charset hint; non-HTML degrades to hash-only per the engine contract.
+ */
+export declare function executeArchiveDiff(url: string, options?: ArchiveDiffOptions, dependencies?: {
+    sleep?: (ms: number) => Promise<void>;
+    cdxEndpoint?: string;
+    replayBaseUrl?: string;
+    now?: () => number;
+}): Promise<ArchiveDiffReport>;
+/**
+ * Same-document URL comparison: normalizes before comparing so a
+ * 301 to a trailing-slash variant of the same path is NOT a move,
+ * matching watch run's cross-surface rule. Case-insensitive host,
+ * trailing-slash-insensitive for non-root paths, query strings stay
+ * significant. Unparseable inputs fall back to exact string equality
+ * (degrades to the pre-normalization behavior, never worse).
+ * Exported for watch.ts to adopt the same comparison.
+ */
+export declare function isSameDocumentUrl(a: string, b: string): boolean;
+/**
+ * Invocation-seam wrapper for archive diff.
+ */
+export declare function archiveDiffCommand(url: string, options?: ArchiveDiffOptions): Promise<CommandResult<ArchiveDiffReport>>;
+/**
+ * Parse CLI args for archive command.
+ */
+export declare function parseArchiveArgs(args: readonly string[]): {
+    readonly subcommand?: string;
+    readonly positional: readonly string[];
+    readonly flags: Record<string, string | boolean>;
+    readonly showHelp: boolean;
+};
+/**
+ * Dispatcher handler for `archive` in `src/index.ts`.
+ */
+export declare function handleArchive(args: string[], outputMode: OutputMode, deps: HandlerDependencies, forceRaw?: boolean): Promise<number>;
+//# sourceMappingURL=archive.d.ts.map

package/dist/commands/archive.d.ts.map

@@ -0,0 +1 @@
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