scip-query 0.10.6 → 0.10.8

package/dist/reindex.js

@@ -1,9 +1,9 @@
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o=[r.symbol,r.isReference?"1":"0",r.isImplementation?"1":"0",r.isTypeDefinition?"1":"0",r.isDefinition?"1":"0"].join("|");n.has(o)||(n.add(o),t.push(r))}return t}function Ln(e,n){return e?n?e.length>=n.length?e:n:e:n}function Cn(e){return[...new Set(e)]}import{execFileSync as wn}from"child_process";import{createHash as On}from"crypto";import{readdirSync as Fn,readFileSync as Dn}from"fs";import{join as de}from"path";function pe(e){return(Vn(e)??Tn(e)).filter(n=>n&&!me(n)).sort()}function S(e,n={}){return(n.language?pe(e).filter(r=>En(r,n.language,n.markerFiles)):pe(e)).map(r=>{let o=de(e,r);try{let i=Dn(o);return{path:r,size:i.byteLength,hash:On("sha256").update(i).digest("hex")}}catch{return{path:r,size:-1,hash:"unreadable"}}})}function En(e,n,t){let r=e.split("/").at(-1)??e;if(t?.includes(e)||t?.includes(r)||Mn.has(r))return!0;let o=e.includes(".")?`.${e.split(".").at(-1).toLowerCase()}`:"";return(Nn[n]??[]).includes(o)}function Vn(e){try{return 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Set(["package.json","package-lock.json","pnpm-lock.yaml","yarn.lock","bun.lockb","tsconfig.json","tsconfig.base.json","pyproject.toml","setup.py","setup.cfg","Cargo.toml","Cargo.lock","go.mod","go.sum","pom.xml","build.gradle","build.gradle.kts","build.sbt","compile_commands.json","CMakeLists.txt","Makefile","Gemfile","Gemfile.lock","composer.json","composer.lock","pubspec.yaml","pubspec.lock"]),Qt={typescript:[".ts",".tsx",".mts",".cts"],javascript:[".js",".jsx",".mjs",".cjs"],java:[".java"],scala:[".scala"],kotlin:[".kt",".kts"],rust:[".rs"],python:[".py",".pyi"],ruby:[".rb"],go:[".go"],cpp:[".cc",".cpp",".cxx",".hpp",".hh",".hxx"],c:[".c",".h"],csharp:[".cs"],vb:[".vb"],dart:[".dart"],php:[".php"]};import{readFileSync as Zt,writeFileSync as en}from"fs";import{create as xe}from"@bufbuild/protobuf";import{deserializeSCIP as tn,DocumentSchema as nn,IndexSchema as rn,serializeSCIP as on,SymbolRole as sn}from"@c4312/scip";function Re(e){let t;try{t=tn(Zt(e))}catch{return{removedDefinitionOccurrences:0,touchedDocuments:0}}let n=an(t);return n.removedDefinitionOccurrences>0&&en(e,Buffer.from(on(n.index))),{removedDefinitionOccurrences:n.removedDefinitionOccurrences,touchedDocuments:n.touchedDocuments}}function an(e){let t=new Set;for(let o of e.documents)for(let s of o.symbols)s.symbol&&t.add(s.symbol);for(let o of e.externalSymbols)o.symbol&&t.add(o.symbol);let n=0,r=0,i=[];for(let o of e.documents){let s=o.occurrences.filter(a=>(a.symbolRoles&sn.Definition)===0||t.has(a.symbol)?!0:(n+=1,!1));if(s.length===o.occurrences.length){i.push(o);continue}r+=1,i.push(xe(nn,{language:o.language,relativePath:o.relativePath,occurrences:s,symbols:o.symbols,text:o.text,positionEncoding:o.positionEncoding}))}return{index:n===0?e:xe(rn,{metadata:e.metadata,documents:i,externalSymbols:e.externalSymbols}),removedDefinitionOccurrences:n,touchedDocuments:r}}import{existsSync as un,readFileSync as cn,readdirSync as ln,statSync as gn}from"fs";import d from"path";var pn=new Set([".cache",".git",".next",".nuxt",".turbo",".nx","build","coverage","dist","node_modules","tmp","vendor"]);function ve(e,t=[]){let n=d.resolve(e),r=dn(n),i=t.flatMap(u=>fn(n,u)),o=hn([...r,...i]),s=yn(n,o)?[n,...o]:o,a=s.length>0?s:[n];return[...new Set(a.map(u=>Sn(n,u)))].sort((u,c)=>u.localeCompare(c))}function dn(e){let t=[],n=[e];for(;n.length>0;){let r=n.pop(),i;try{i=ln(r,{withFileTypes:!0})}catch{continue}for(let o of i){let s=d.join(r,o.name);if(o.isDirectory()){!pn.has(o.name)&&!o.name.startsWith(".")&&n.push(s);continue}o.isFile()&&mn(s)&&t.push(d.dirname(s))}}return t}function fn(e,t){let n=t.trim();if(!n)return[];let r=d.resolve(e,n);if(!Rn(e,r))return[];try{let i=gn(r);if(i.isDirectory())return[r];if(i.isFile()&&ke(d.basename(r)))return[d.dirname(r)]}catch{return[]}return[]}function mn(e){if(!ke(d.basename(e)))return!1;let t=Pe(e);return t?d.basename(e)==="tsconfig.json"||"include"in t||"files"in t||"references"in t:!1}function 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as kn}from"os";import{join as Ie}from"path";function Pn(e,t,n){if(!e.defaultOutputPath)return;let r=Ie(t,e.defaultOutputPath);n!==r&&w(r)&&_(r,n)}function In(e,t,n){if(!e.defaultOutputPath)return null;let r=Ie(t,e.defaultOutputPath);if(r===n)return null;let i=`${n}.default-output-backup`;return B(i,{force:!0}),w(r)?(_(r,i),{defaultOutputPath:r,backupPath:i}):{defaultOutputPath:r,backupPath:null}}function Ln(e){e&&(B(e.defaultOutputPath,{force:!0}),e.backupPath&&w(e.backupPath)&&_(e.backupPath,e.defaultOutputPath))}function jn(e,t){if(e<=1)return 1;let n=Number(process.env.SCIP_QUERY_INDEXER_CONCURRENCY??0),r=Number.isFinite(t)&&t&&t>0?t:Number.isFinite(n)&&n>0?n:Math.min(8,Math.max(1,kn().length));return Math.max(1,Math.min(e,Math.floor(r)))}async function Le(e,t,n,r){let i=e.filter(c=>c.config.defaultOutputPath),o=e.filter(c=>!c.config.defaultOutputPath),s=[],a=jn(o.length,r),u=await Cn(o,a,c=>$(c,t,n));if(a>1){let c=new Map;for(let g of u.filter(l=>l.skipped)){let 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U}from"child_process";import{existsSync as W,readFileSync as On}from"fs";import{createRequire as Tn}from"module";import{platform as Mn}from"os";import{dirname as je,join as C}from"path";var Dn=Tn(import.meta.url);function J(e){return[e.indexerBinary,...e.binaryAliases??[]]}function O(e){let t=J(e);return t.length===1?t[0]:t.join(" or ")}function v(e){for(let t of J(e))if(x(t))return t;return En(e)}function G(e){return v(e)!==null||Fn(e)}function Fn(e){return we(e)!==null}function En(e){let t=we(e);if(!t)return null;let r=JSON.parse(On(t,"utf8")).bin;if(!r)return null;if(typeof r=="string")return C(je(t),r);for(let i of J(e)){let o=r[i];if(o)return C(je(t),o)}return null}function we(e){if(!e.bundledNpmPackage)return null;try{return Dn.resolve(`${e.bundledNpmPackage}/package.json`)}catch{return null}}function q(e,t){for(let n of e.projectLocalBinaries??[]){let r=C(t,n);if(W(r))return r}return null}function 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t=[],n=e.DOTNET_ROOT;if(n&&W(n)&&t.push(n),Mn()==="darwin"&&x("brew"))try{let r=U("brew",["--prefix","dotnet@9"],{stdio:"pipe",env:e}).toString().trim(),i=C(r,"libexec");W(i)&&!t.includes(i)&&t.push(i)}catch{}return t}function Ce(e,t){try{return U(e,["--version"],{stdio:"pipe",env:t}),!0}catch{return!1}}import yr from"better-sqlite3";import{existsSync as br,readFileSync as Sr,writeFileSync as xr}from"fs";import{dirname as Rr,join as vr,resolve as kr}from"path";import{readFileSync as An,rmSync as $n,statSync as _n,mkdtempSync as Bn}from"fs";import{cpus as Wn,tmpdir as Un}from"os";import{join as K}from"path";import{Worker as Jn}from"worker_threads";function Oe(e){return e.length>=8&&Me(e.length)>1}function Te(e){let t=Me(e.vueFiles.length),n=qn(e.vueFiles),r=Hn(n,t),i=new URL("./augment-vue-worker.js",import.meta.url),o=Bn(K(Un(),"scip-query-vue-workers-")),s=new SharedArrayBuffer(4),a=new Int32Array(s),u=Gn(),c=Date.now();try{for(let l=0;l<r.length;l++)new 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       DELETE FROM mentions
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@@ -18,12 +18,12 @@ import{a as x,b as O,f as F}from"./chunk-ONPCQ2PM.js";import{a as ne}from"./chun
         FROM documents
         WHERE language = 'vue' OR relative_path LIKE '%.vue'
       )
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@@ -32,23 +32,23 @@ import{a as x,b as O,f as F}from"./chunk-ONPCQ2PM.js";import{a as ne}from"./chun
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+`+o)}if(t.length!==0&&(i(`Indexed ${e.length} language output(s); skipped or incomplete: ${t.map(o=>o.language).join(", ")}.`),!r))throw new Error(`Failed to index all required languages; preserving the previous index. Pass --allow-partial to intentionally write an incomplete index.
+`+t.map(o=>`  - ${o.language}: ${o.reason}`).join(`
+`))}function ri(e,t,n){e.length>1?(n(`Merging ${e.length} language indexes...`),j(e.map(r=>r.scipPath),t)):e[0].scipPath!==t&&k(e[0].scipPath,t)}function ii(e,t,n,r){if(r("Converting to SQLite..."),!M(e))throw new Error(`SCIP index not found at ${e} after indexing`);try{let i=Re(e);i.removedDefinitionOccurrences>0&&r(`Sanitized ${i.removedDefinitionOccurrences} invalid definition occurrences across ${i.touchedDocuments} documents before SQLite conversion.`);let o=F();if(!o)throw new Error("scip CLI is not available");Ar(o,["expt-convert","--output",t,e],{env:n,stdio:"pipe",maxBuffer:50*1024*1024})}catch(i){let o=i instanceof Error?i.message:String(i);throw new Error(`Failed to convert SCIP index to SQLite: ${o}`,{cause:i})}}function tt(e,t,n){let r=Ur(e)||".scip",i=T(e,r);return m(f(e),`${i}.${n+1}.${t}${r}`)}async function oi(e,t){for(let n=0;n<2;n++){let r=si(e,t);if(r)return r;let i=ai(e);if(i&&ui(t.trigger,i)){t.onStatus(`Manual reindex preempting watcher refresh started at ${i.startedAt}.`),await li(i.pid),P(e,{force:!0});continue}if(i&&!ne(i.pid)){P(e,{force:!0});continue}throw new Error(`Another scip-query reindex is already running for ${f(e)}.`)}throw new Error(`Could not acquire scip-query reindex lock for ${f(e)}.`)}function si(e,t){let n;try{n=Wr(e,"wx")}catch(i){if((typeof i=="object"&&i&&"code"in i?i.code:void 0)==="EEXIST")return null;throw i}let r={version:1,pid:process.pid,projectRoot:t.projectRoot,startedAt:new Date().toISOString(),trigger:t.trigger};return Ze(n,JSON.stringify(r)+`
+`),()=>{try{$r(n)}finally{P(e,{force:!0})}}}function ai(e){try{let t=JSON.parse(D(e,"utf-8"));return typeof t.pid!="number"||!Number.isInteger(t.pid)||t.pid<=0?null:{version:1,pid:t.pid,projectRoot:typeof t.projectRoot=="string"?t.projectRoot:f(e),startedAt:typeof t.startedAt=="string"?t.startedAt:"unknown",trigger:t.trigger}}catch{return null}}function ui(e,t){return e?.kind==="manual-cli"&&ci(t?.trigger)}function ci(e){return e?.kind==="watch-source"||e?.kind==="watch-git-head"||e?.kind==="watch-git-index"||e?.kind==="watch-git-state"}async function li(e){Ye(e,"SIGTERM"),!await Qe(e,2e3)&&(Ye(e,"SIGKILL"),await Qe(e,1e3))}function Ye(e,t){try{process.kill(-e,t)}catch{try{process.kill(e,t)}catch{}}}async function Qe(e,t){let n=Date.now()+t;for(;Date.now()<n;){if(!ne(e))return!0;await gi(50)}return!ne(e)}function ne(e){try{return process.kill(e,0),!0}catch{return!1}}function gi(e){return new Promise(t=>setTimeout(t,e))}function pi(e){ee(e.tempOutputScip,e.outputScip),ee(e.tempOutputDb,e.outputDb),ee(e.tempMetaPath,e.metaPath)}function ee(e,t){P(`${t}.tmp-replace`,{force:!0}),k(e,`${t}.tmp-replace`),k(`${t}.tmp-replace`,t)}function di(e,t,n){return{version:2,languages:[...t].sort(),pnpmWorkspaces:it(n),typescriptProjectMode:n.typescriptProjectMode??"single",typescriptProjects:rt(n.typescriptProjects),files:R(e)}}function nt(e,t,n){return Object.fromEntries(t.map(r=>{let i=L(r).markerFiles,o=r==="typescript"?{typescriptProjectMode:n.typescriptProjectMode??"single",typescriptProjects:rt(n.typescriptProjects)}:{typescriptProjectMode:"single",typescriptProjects:[]};return[r,{version:2,languages:[r],pnpmWorkspaces:r==="typescript"&&it(n),...o,files:R(e,{language:r,markerFiles:i})}]}))}function rt(e){return[...new Set((e??[]).map(t=>t.trim()).filter(Boolean))].sort((t,n)=>t.localeCompare(n))}function it(e){return e.typescriptProjectMode!=="workspace"&&e.pnpmWorkspaces===!0}function ot(e,t){return m(f(e),"language-indexes",`${t}.scip`)}function fi(e,t){try{let n=JSON.parse(D(e,"utf-8"));return(n.version===2||n.version===3)&&n.status==="complete"&&S(n.fingerprint)===S(t)&&S([...n.indexedLanguages??[]].sort())===S(t.languages)}catch{return!1}}function st(e,t){let n=`${e}.tmp-${process.pid}-${Date.now()}`;Ze(n,`${JSON.stringify(t,null,2)}
+`),k(n,e)}function at(e,t){try{let n=JSON.parse(D(e,"utf-8"));if(n.version!==2&&n.version!==3)return;st(e,{...n,lastRefresh:t})}catch{}}function re(e){return{trigger:e.trigger??{kind:"unknown"},result:e.result,startedAt:new Date(e.start).toISOString(),completedAt:new Date().toISOString(),durationMs:Date.now()-e.start,indexedLanguages:e.languages?[...e.languages]:void 0,skipped:e.skipped?[...e.skipped]:void 0,error:e.error}}function S(e){return JSON.stringify(e)}export{fe as INDEXER_CONFIGS,b as augmentAuxiliaryDocuments,Pr as augmentVueResolvedReferences,O as describeIndexerBinary,V as detectLanguages,L as getIndexerConfig,z as getIndexerExecutionEnv,x as isBinaryAvailable,G as isIndexerInstalled,j as mergeScipFiles,me as mergeScipIndexes,No as reindex,v as resolveIndexerBinary,q as resolveProjectLocalIndexerBinary,H as tryInstallIndexer,E as tryInstallScipCli};
 //# sourceMappingURL=reindex.js.map

package/dist/runtime.d.ts

@@ -1,20 +1,6 @@
-import { P as ProjectConfig, a as SupportedLanguage } from './config-types-Bj4sh28g.js';
-export { g as getScipVersion, i as isScipInstalled, p as printScipInstallInstructions } from './scip-cli-Bh1M_JPu.js';
-
-type WatcherStatus = {
-    state: 'idle';
-} | {
-    state: 'waiting';
-    changedFiles: number;
-    reindexAt: number;
-} | {
-    state: 'indexing';
-    startedAt: number;
-} | {
-    state: 'cooldown';
-    until: number;
-    dirty: boolean;
-};
+import { P as ProjectConfig, a as SupportedLanguage } from './config-types-BDIWAYzr.js';
+import { W as WatcherStatus } from './scip-cli-CnK9Va4O.js';
+export { g as getScipVersion, i as isScipInstalled, p as printScipInstallInstructions } from './scip-cli-CnK9Va4O.js';
 
 /**
  * Load project config from .scipquery.json in the project root.
@@ -52,14 +38,17 @@ interface WatcherOptions {
  *  - Single-flight: only one reindex runs at a time, never queued
  *  - Dirty flag: changes during reindex schedule ONE follow-up
  *  - Cooldown: minimum interval between reindex completions
- *  - Atomic swap: writes to index.db.tmp, renames on success
+ *  - Atomic publish: the reindexer writes temp artifacts, then promotes them
  */
 declare class Watcher {
     private projectRoot;
+    private config;
     private watchConfig;
-    private indexPaths;
     private languages?;
     private pnpmWorkspaces;
+    private typescriptProjectMode?;
+    private typescriptProjects?;
+    private indexerConcurrency?;
     private onStatus;
     private onReindexComplete;
     private onError;
@@ -68,9 +57,12 @@ declare class Watcher {
     private cooldownTimer;
     private dirty;
     private changedFiles;
+    private pendingTrigger;
     private reindexInFlight;
     private lastReindexEnd;
     private fsWatchers;
+    private gitPollTimer;
+    private lastGitState;
     private gitignoreFilter;
     private extraIgnore;
     private stopped;
@@ -80,15 +72,20 @@ declare class Watcher {
     /** Stop watching and clean up */
     stop(): void;
     private handleFileChange;
+    private scheduleReindex;
     private triggerReindex;
     /**
      * Run the reindex in a forked child process.
-     * Writes to index.db.tmp, then atomically renames to index.db.
+     * The child process uses the reindexer's own atomic publish path.
      */
     private runReindex;
     private setStatus;
     private clearDebounceTimer;
     private clearCooldownTimer;
+    private startGitStatePolling;
+    private pollGitState;
+    private readGitState;
+    private clearGitPollTimer;
 }
 
 interface InstallSkillsResult {

package/dist/runtime.js

@@ -1,3 +1,3 @@
-import{c as $,d as T,e as E}from"./chunk-ONPCQ2PM.js";import{a as v}from"./chunk-UUBMFL3F.js";import{readFileSync as D,writeFileSync as A,existsSync as b,mkdirSync as _}from"fs";import{join as c,resolve as C}from"path";import{createHash as W}from"crypto";import{homedir as F}from"os";var h=".scipquery.json",M={enabled:!1,debounceMs:3e4,cooldownMs:6e4,ignore:[]};function L(i){let e=c(i,h);if(!b(e))return{};try{let t=D(e,"utf-8");return JSON.parse(t)}catch(t){let s=t instanceof Error?t.message:String(t);throw t instanceof SyntaxError?new Error(`invalid ${h} at ${e}: ${s}`,{cause:t}):new Error(`unable to read ${h} at ${e}: ${s}`,{cause:t})}}function P(i){return{...M,...i.watch}}function N(i,e){let t=process.env.SCIP_QUERY_CACHE_DIR;if(t)return f(t);if(e?.dbPath)return f(C(i,e.dbPath));let n=process.env.XDG_CACHE_HOME||c(F(),".cache"),r=W("sha256").update(C(i)).digest("hex").slice(0,12),o=c(n,"scip-query","projects",r);return f(o)}function m(i,e){let t=N(i,e);return{cacheDir:t,dbPath:c(t,"index.db"),indexPath:c(t,"index.scip"),metaPath:c(t,"meta.json")}}function O(i,e){let t=c(i,h);return b(t)||A(t,JSON.stringify({languages:e,watch:{enabled:!1,debounceMs:3e4,cooldownMs:6e4}},null,2)+`
-`),t}function f(i){return _(i,{recursive:!0}),i}import{watch as U}from"fs";import{existsSync as R,renameSync as k}from"fs";import{join as q,relative as H}from"path";import{fork as B}from"child_process";import G from"ignore";var y=class{projectRoot;watchConfig;indexPaths;languages;pnpmWorkspaces;onStatus;onReindexComplete;onError;status={state:"idle"};debounceTimer=null;cooldownTimer=null;dirty=!1;changedFiles=0;reindexInFlight=!1;lastReindexEnd=0;fsWatchers=[];gitignoreFilter;extraIgnore;stopped=!1;constructor(e){this.projectRoot=e.projectRoot,this.watchConfig=P(e.config),this.indexPaths=m(e.projectRoot,e.config),this.languages=e.languages,this.pnpmWorkspaces=e.config.indexer?.typescript?.pnpmWorkspaces??!1,this.onStatus=e.onStatus??(()=>{}),this.onReindexComplete=e.onReindexComplete??(()=>{}),this.onError=e.onError??(t=>console.error(t.message)),this.gitignoreFilter=v(e.projectRoot),this.extraIgnore=G(),this.watchConfig.ignore.length>0&&this.extraIgnore.add(this.watchConfig.ignore)}start(){this.stopped=!1,this.setStatus({state:"idle"});try{let e=U(this.projectRoot,{recursive:!0},(t,s)=>{s&&!this.stopped&&this.handleFileChange(s)});this.fsWatchers.push(e)}catch{this.onError(new Error("Failed to start file watcher. On Linux, you may need to increase inotify limits: sysctl -w fs.inotify.max_user_watches=524288"))}}stop(){this.stopped=!0;for(let e of this.fsWatchers)e.close();this.fsWatchers=[],this.clearDebounceTimer(),this.clearCooldownTimer(),this.setStatus({state:"idle"})}handleFileChange(e){let t=H(this.projectRoot,q(this.projectRoot,e));if(this.gitignoreFilter.isIgnored(t)||this.extraIgnore.ignores(t)||e.endsWith("index.db")||e.endsWith("index.scip")||e.endsWith("index.db.tmp")||e.endsWith(".scipquery.json"))return;if(this.changedFiles++,this.reindexInFlight){this.dirty=!0,this.setStatus({state:"indexing",startedAt:this.status.startedAt});return}if(this.status.state==="cooldown"){this.dirty=!0,this.setStatus({state:"cooldown",until:this.status.until,dirty:!0});return}this.clearDebounceTimer();let s=Date.now()+this.watchConfig.debounceMs;this.setStatus({state:"waiting",changedFiles:this.changedFiles,reindexAt:s}),this.debounceTimer=setTimeout(()=>{this.debounceTimer=null,this.triggerReindex()},this.watchConfig.debounceMs)}triggerReindex(){if(this.reindexInFlight||this.stopped)return;let e=Date.now()-this.lastReindexEnd;if(this.lastReindexEnd>0&&e<this.watchConfig.cooldownMs){let s=this.watchConfig.cooldownMs-e;this.dirty=!0;let n=Date.now()+s;this.setStatus({state:"cooldown",until:n,dirty:!0}),this.cooldownTimer=setTimeout(()=>{this.cooldownTimer=null,this.dirty&&!this.stopped&&(this.dirty=!1,this.triggerReindex())},s);return}this.reindexInFlight=!0,this.dirty=!1,this.changedFiles=0;let t=Date.now();this.setStatus({state:"indexing",startedAt:t}),this.runReindex().then(s=>{if(this.reindexInFlight=!1,this.lastReindexEnd=Date.now(),this.onReindexComplete(s),this.dirty&&!this.stopped){let n=Date.now()+this.watchConfig.cooldownMs;this.setStatus({state:"cooldown",until:n,dirty:!0}),this.cooldownTimer=setTimeout(()=>{this.cooldownTimer=null,this.dirty&&!this.stopped?(this.dirty=!1,this.triggerReindex()):this.setStatus({state:"idle"})},this.watchConfig.cooldownMs)}else this.setStatus({state:"idle"})}).catch(s=>{this.reindexInFlight=!1,this.lastReindexEnd=Date.now(),this.onError(s instanceof Error?s:new Error(String(s))),this.setStatus({state:"idle"})})}runReindex(){return new Promise((e,t)=>{let s=Date.now(),n=this.indexPaths.dbPath+".tmp",r=X(this.indexPaths.indexPath),o=B(new URL("./reindex-worker.js",import.meta.url).pathname,[],{env:{...process.env,SCIP_REINDEX_PROJECT_ROOT:this.projectRoot,SCIP_REINDEX_OUTPUT_SCIP:r,SCIP_REINDEX_OUTPUT_DB:n,SCIP_REINDEX_LANGUAGES:this.languages?.join(",")??"",SCIP_REINDEX_PNPM_WORKSPACES:this.pnpmWorkspaces?"1":""},stdio:"pipe"});o.on("exit",d=>{if(d===0)try{R(n)&&k(n,this.indexPaths.dbPath),R(r)&&k(r,this.indexPaths.indexPath),e(Date.now()-s)}catch(a){t(new Error(`Atomic swap failed: ${a}`))}else t(new Error(`Reindex worker exited with code ${d}`))}),o.on("error",t)})}setStatus(e){this.status=e,this.onStatus(e)}clearDebounceTimer(){this.debounceTimer&&(clearTimeout(this.debounceTimer),this.debounceTimer=null)}clearCooldownTimer(){this.cooldownTimer&&(clearTimeout(this.cooldownTimer),this.cooldownTimer=null)}};function X(i){return i.endsWith(".scip")?i.slice(0,-5)+".tmp.scip":i+".tmp.scip"}import{existsSync as x,mkdirSync as J,symlinkSync as V,readlinkSync as K,unlinkSync as Q}from"fs";import{join as p,dirname as I,resolve as S}from"path";import{homedir as w,platform as Y}from"os";import{fileURLToPath as z}from"url";var Z=Y()==="win32",ee=["scip-query","scip-query-setup","scip-adoption","scip-health-audit","scip-health-improve","scip-api-impact","concrete-plan","scip-ai-cleanup","scip-debug","scip-explore","scip-triage-issue","scip-diagram","scip-debloat","scip-doc-reconcile","scip-directory-architecture","scip-maintainability","scip-react-maintainability","scip-vue-maintainability","scip-verify","scip-language-playbook"];function te(i={}){let e=i.quiet?()=>{}:console.log,t=z(import.meta.url),s=S(I(t),"..","skills"),n=[p(w(),".claude","skills"),p(w(),".codex","skills"),p(w(),".agents","skills")],r={installed:[],skipped:[],alreadyLinked:[]};for(let o of n){let d=I(o);if(!x(d))continue;J(o,{recursive:!0});let a=ie(o);for(let l of ee){let g=p(s,l),u=p(o,l);if(!x(g)){r.skipped.push(`${a}/${l}`);continue}if(x(u)){try{let j=K(u);if(S(j)===S(g)){r.alreadyLinked.push(`${a}/${l}`),e(`  ok:   ${l} \u2192 ${a} (already linked)`);continue}}catch{r.skipped.push(`${a}/${l}`),e(`  skip: ${l} \u2192 ${a} (exists, not a symlink)`);continue}Q(u)}V(g,u,Z?"junction":"dir"),r.installed.push(`${a}/${l}`),e(`  done: ${l} \u2192 ${a}`)}}return r}function ie(i){return i.includes(".codex")?"Codex":i.includes(".agents")?"Agents":"Claude"}export{y as Watcher,T as getScipVersion,O as initProjectConfig,te as installSkills,$ as isScipInstalled,L as loadProjectConfig,E as printScipInstallInstructions,m as resolveIndexPaths};
+import{c as I,d as M,e as E}from"./chunk-ONPCQ2PM.js";import{a as C}from"./chunk-UUBMFL3F.js";import{readFileSync as $,writeFileSync as D,existsSync as R,mkdirSync as _}from"fs";import{isAbsolute as oe,join as c,relative as ae,resolve as P}from"path";import{createHash as A}from"crypto";import{homedir as N}from"os";var g=".scipquery.json",W={enabled:!1,debounceMs:3e4,cooldownMs:6e4,gitPollMs:2e3,autoRefresh:!0,ignore:[]};function m(i){let e=c(i,g);if(!R(e))return{};try{let t=$(e,"utf-8");return JSON.parse(t)}catch(t){let r=t instanceof Error?t.message:String(t);throw t instanceof SyntaxError?new Error(`invalid ${g} at ${e}: ${r}`,{cause:t}):new Error(`unable to read ${g} at ${e}: ${r}`,{cause:t})}}function j(i){return{...W,...i.watch}}function G(i,e){let t=process.env.SCIP_QUERY_CACHE_DIR;if(t)return f(t);if(e?.dbPath)return f(P(i,e.dbPath));let s=process.env.XDG_CACHE_HOME||c(N(),".cache"),n=A("sha256").update(P(i)).digest("hex").slice(0,12),a=c(s,"scip-query","projects",n);return f(a)}function y(i,e){let t=G(i,e);return{cacheDir:t,dbPath:c(t,"index.db"),indexPath:c(t,"index.scip"),metaPath:c(t,"meta.json")}}function F(i,e){let t=c(i,g);return R(t)||D(t,JSON.stringify({languages:e,watch:{enabled:!1,debounceMs:3e4,cooldownMs:6e4,gitPollMs:2e3,autoRefresh:!0}},null,2)+`
+`),t}function f(i){return _(i,{recursive:!0}),i}import{execFileSync as O,fork as L}from"child_process";import{statSync as U,watch as H}from"fs";import{join as q,relative as X}from"path";import B from"ignore";var x=class{projectRoot;config;watchConfig;languages;pnpmWorkspaces;typescriptProjectMode;typescriptProjects;indexerConcurrency;onStatus;onReindexComplete;onError;status={state:"idle"};debounceTimer=null;cooldownTimer=null;dirty=!1;changedFiles=0;pendingTrigger=null;reindexInFlight=!1;lastReindexEnd=0;fsWatchers=[];gitPollTimer=null;lastGitState=null;gitignoreFilter;extraIgnore;stopped=!1;constructor(e){this.projectRoot=e.projectRoot,this.config=e.config,this.watchConfig=j(e.config),this.languages=e.languages,this.pnpmWorkspaces=e.config.indexer?.typescript?.pnpmWorkspaces??!1,this.typescriptProjectMode=e.config.indexer?.typescript?.projectMode,this.typescriptProjects=e.config.indexer?.typescript?.projects,this.indexerConcurrency=e.config.indexerConcurrency,this.onStatus=e.onStatus??(()=>{}),this.onReindexComplete=e.onReindexComplete??(()=>{}),this.onError=e.onError??(t=>console.error(t.message)),this.gitignoreFilter=C(e.projectRoot),this.extraIgnore=B(),this.watchConfig.ignore.length>0&&this.extraIgnore.add(this.watchConfig.ignore)}start(){this.stopped=!1,this.setStatus({state:"idle"}),this.startGitStatePolling();try{let e=H(this.projectRoot,{recursive:!0},(t,r)=>{r&&!this.stopped&&this.handleFileChange(r)});this.fsWatchers.push(e)}catch{this.onError(new Error("Failed to start file watcher. On Linux, you may need to increase inotify limits: sysctl -w fs.inotify.max_user_watches=524288"))}}stop(){this.stopped=!0;for(let e of this.fsWatchers)e.close();this.fsWatchers=[],this.clearDebounceTimer(),this.clearCooldownTimer(),this.clearGitPollTimer(),this.setStatus({state:"idle"})}handleFileChange(e){let t=X(this.projectRoot,q(this.projectRoot,e));t===".git"||t.startsWith(".git/")||this.gitignoreFilter.isIgnored(t)||this.extraIgnore.ignores(t)||e.endsWith("index.db")||e.endsWith("index.scip")||e.endsWith("index.db.tmp")||this.scheduleReindex({kind:"watch-source",detail:t})}scheduleReindex(e){if(this.pendingTrigger=z(this.pendingTrigger,e),this.changedFiles++,this.reindexInFlight){this.dirty=!0,this.setStatus({state:"indexing",startedAt:this.status.startedAt});return}if(this.status.state==="cooldown"){this.dirty=!0,this.setStatus({state:"cooldown",until:this.status.until,dirty:!0});return}this.clearDebounceTimer();let t=Date.now()+this.watchConfig.debounceMs;this.setStatus({state:"waiting",changedFiles:this.changedFiles,reindexAt:t}),this.debounceTimer=setTimeout(()=>{this.debounceTimer=null,this.triggerReindex()},this.watchConfig.debounceMs)}triggerReindex(){if(this.reindexInFlight||this.stopped)return;let e=Date.now()-this.lastReindexEnd;if(this.lastReindexEnd>0&&e<this.watchConfig.cooldownMs){let s=this.watchConfig.cooldownMs-e;this.dirty=!0;let n=Date.now()+s;this.setStatus({state:"cooldown",until:n,dirty:!0}),this.cooldownTimer=setTimeout(()=>{this.cooldownTimer=null,this.dirty&&!this.stopped&&(this.dirty=!1,this.triggerReindex())},s);return}this.reindexInFlight=!0,this.dirty=!1,this.changedFiles=0;let t=this.pendingTrigger??{kind:"watch-source"};this.pendingTrigger=null;let r=Date.now();this.setStatus({state:"indexing",startedAt:r}),this.runReindex(t).then(s=>{if(this.reindexInFlight=!1,this.lastReindexEnd=Date.now(),this.onReindexComplete(s),this.dirty&&!this.stopped){let n=Date.now()+this.watchConfig.cooldownMs;this.setStatus({state:"cooldown",until:n,dirty:!0}),this.cooldownTimer=setTimeout(()=>{this.cooldownTimer=null,this.dirty&&!this.stopped?(this.dirty=!1,this.triggerReindex()):this.setStatus({state:"idle"})},this.watchConfig.cooldownMs)}else this.setStatus({state:"idle"})}).catch(s=>{this.reindexInFlight=!1,this.lastReindexEnd=Date.now(),this.onError(s instanceof Error?s:new Error(String(s))),this.setStatus({state:"idle"})})}runReindex(e){return new Promise((t,r)=>{let s=Date.now(),n=m(this.projectRoot),a=Object.keys(n).length>0?n:this.config,h=y(this.projectRoot,a),l=a.indexer?.typescript,o=L(new URL("./reindex-worker.js",import.meta.url).pathname,[],{detached:!0,env:{...process.env,SCIP_REINDEX_PROJECT_ROOT:this.projectRoot,SCIP_REINDEX_OUTPUT_SCIP:h.indexPath,SCIP_REINDEX_OUTPUT_DB:h.dbPath,SCIP_REINDEX_LANGUAGES:(a.languages??this.languages)?.join(",")??"",SCIP_REINDEX_INDEXER_CONCURRENCY:String(a.indexerConcurrency??this.indexerConcurrency??""),SCIP_REINDEX_PNPM_WORKSPACES:l?.pnpmWorkspaces??this.pnpmWorkspaces?"1":"",SCIP_REINDEX_TYPESCRIPT_CONFIG:JSON.stringify({projectMode:l?.projectMode??this.typescriptProjectMode,projects:l?.projects??this.typescriptProjects??[]}),SCIP_REINDEX_TRIGGER_KIND:e.kind,SCIP_REINDEX_TRIGGER_DETAIL:e.detail??""},stdio:"pipe"});o.on("exit",p=>{p===0?t(Date.now()-s):r(new Error(`Reindex worker exited with code ${p}`))}),o.on("error",r)})}setStatus(e){this.status=e,this.onStatus(e)}clearDebounceTimer(){this.debounceTimer&&(clearTimeout(this.debounceTimer),this.debounceTimer=null)}clearCooldownTimer(){this.cooldownTimer&&(clearTimeout(this.cooldownTimer),this.cooldownTimer=null)}startGitStatePolling(){this.lastGitState=this.readGitState(),this.lastGitState&&(this.gitPollTimer=setInterval(()=>this.pollGitState(),this.watchConfig.gitPollMs),this.gitPollTimer.unref?.())}pollGitState(){let e=this.lastGitState,t=this.readGitState();if(!e||!t||this.stopped){this.lastGitState=t;return}this.lastGitState=t;let r=e.head!==t.head,s=e.indexPath!==t.indexPath||e.indexMtimeMs!==t.indexMtimeMs||e.indexSize!==t.indexSize;r&&s?this.scheduleReindex({kind:"watch-git-state",detail:"HEAD and index changed"}):r?this.scheduleReindex({kind:"watch-git-head",detail:"HEAD changed"}):s&&this.scheduleReindex({kind:"watch-git-index",detail:t.indexPath??"index changed"})}readGitState(){let e=T(this.projectRoot,["rev-parse","--git-path","index"]);if(!e)return null;let t={head:T(this.projectRoot,["rev-parse","--verify","HEAD"]),indexPath:e};try{let r=U(e);t.indexMtimeMs=r.mtimeMs,t.indexSize=r.size}catch{t.indexMtimeMs=void 0,t.indexSize=void 0}return t}clearGitPollTimer(){this.gitPollTimer&&(clearInterval(this.gitPollTimer),this.gitPollTimer=null)}};function T(i,e){try{return O("git",["-C",i,...e],{encoding:"utf-8",stdio:["ignore","pipe","ignore"]}).trim()}catch{return}}function z(i,e){return i?i.kind===e.kind?i.detail===e.detail?i:{kind:i.kind,detail:"multiple changes"}:{kind:"watch-git-state",detail:`${i.kind}, ${e.kind}`}:e}import{existsSync as S,mkdirSync as J,symlinkSync as K,readlinkSync as V,unlinkSync as Y}from"fs";import{join as d,dirname as k,resolve as v}from"path";import{homedir as w,platform as Q}from"os";import{fileURLToPath as Z}from"url";var ee=Q()==="win32",te=["scip-query","scip-query-setup","scip-adoption","scip-health-audit","scip-health-improve","scip-hyper-optimization","scip-api-impact","concrete-plan","scip-ai-cleanup","scip-debug","scip-explore","scip-triage-issue","scip-diagram","scip-debloat","scip-doc-reconcile","scip-directory-architecture","scip-maintainability","scip-react-maintainability","scip-vue-maintainability","scip-verify","scip-language-playbook"];function ie(i={}){let e=i.quiet?()=>{}:console.log,t=Z(import.meta.url),r=v(k(t),"..","skills"),s=[d(w(),".claude","skills"),d(w(),".codex","skills"),d(w(),".agents","skills")],n={installed:[],skipped:[],alreadyLinked:[]};for(let a of s){let h=k(a);if(!S(h))continue;J(a,{recursive:!0});let l=re(a);for(let o of te){let p=d(r,o),u=d(a,o);if(!S(p)){n.skipped.push(`${l}/${o}`);continue}if(S(u)){try{let b=V(u);if(v(b)===v(p)){n.alreadyLinked.push(`${l}/${o}`),e(`  ok:   ${o} \u2192 ${l} (already linked)`);continue}}catch{n.skipped.push(`${l}/${o}`),e(`  skip: ${o} \u2192 ${l} (exists, not a symlink)`);continue}Y(u)}K(p,u,ee?"junction":"dir"),n.installed.push(`${l}/${o}`),e(`  done: ${o} \u2192 ${l}`)}}return n}function re(i){return i.includes(".codex")?"Codex":i.includes(".agents")?"Agents":"Claude"}export{x as Watcher,M as getScipVersion,F as initProjectConfig,ie as installSkills,I as isScipInstalled,m as loadProjectConfig,E as printScipInstallInstructions,y as resolveIndexPaths};
 //# sourceMappingURL=runtime.js.map

package/dist/scip-cli-CnK9Va4O.d.ts

@@ -0,0 +1,56 @@
+import { a as SupportedLanguage } from './config-types-BDIWAYzr.js';
+
+type WatcherStatus = {
+    state: 'idle';
+} | {
+    state: 'waiting';
+    changedFiles: number;
+    reindexAt: number;
+} | {
+    state: 'indexing';
+    startedAt: number;
+} | {
+    state: 'cooldown';
+    until: number;
+    dirty: boolean;
+};
+type RefreshTriggerKind = 'manual-cli' | 'setup' | 'watch-source' | 'watch-git-head' | 'watch-git-index' | 'watch-git-state' | 'unknown';
+interface RefreshTrigger {
+    kind: RefreshTriggerKind;
+    detail?: string;
+}
+type RefreshResultKind = 'rebuilt' | 'reused' | 'failed';
+interface LastRefreshMetadata {
+    trigger: RefreshTrigger;
+    result: RefreshResultKind;
+    startedAt: string;
+    completedAt: string;
+    durationMs: number;
+    indexedLanguages?: SupportedLanguage[];
+    skipped?: {
+        language: SupportedLanguage;
+        reason: string;
+    }[];
+    error?: string;
+}
+
+/**
+ * Check if the `scip` CLI binary is available on PATH or packaged with scip-query.
+ */
+declare function isScipInstalled(): boolean;
+/**
+ * Get the scip CLI version if installed.
+ */
+declare function getScipVersion(): string | null;
+/**
+ * Print instructions for installing the scip CLI binary.
+ */
+declare function printScipInstallInstructions(): void;
+/**
+ * Attempt to auto-install the `scip` CLI binary.
+ * Tries brew (macOS), then go install, then prints manual instructions.
+ * Returns true if installation succeeded.
+ */
+declare function tryInstallScipCli(onStatus: (msg: string) => void): boolean;
+
+export { type LastRefreshMetadata as L, type RefreshTrigger as R, type WatcherStatus as W, getScipVersion as g, isScipInstalled as i, printScipInstallInstructions as p, tryInstallScipCli as t };

package/docs/AGENT_GUIDE.md

@@ -381,7 +381,7 @@ For command syntax and options reference, see [Command Reference](COMMAND_REFERE
 
 ## Tips for AI Agents
 
-- **Always reindex before analysis** if the codebase has changed significantly: `scip-query reindex`
+- **Check freshness before analysis**: run `scip-query status --capabilities`; if freshness is `stale`, `missing`, or `unknown`, run `scip-query reindex`.
 - **Use `--json` on `health`** for programmatic consumption — parse the JSON to make decisions
 - **Run `change-surface` before every file modification** — it takes <1 second and prevents surprises
 - **Run `diff-impact --json` before committing** — catches unexpected blast radius across downstream consumers