scientify 2.1.0 → 3.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (138) hide show
  1. package/dist/index.d.ts.map +1 -1
  2. package/dist/index.js +1 -76
  3. package/dist/index.js.map +1 -1
  4. package/dist/src/cli/research.d.ts.map +1 -1
  5. package/dist/src/cli/research.js +6 -23
  6. package/dist/src/cli/research.js.map +1 -1
  7. package/dist/src/commands/metabolism-status.d.ts.map +1 -1
  8. package/dist/src/commands/metabolism-status.js +5 -25
  9. package/dist/src/commands/metabolism-status.js.map +1 -1
  10. package/dist/src/commands.d.ts +8 -8
  11. package/dist/src/commands.d.ts.map +1 -1
  12. package/dist/src/commands.js +91 -262
  13. package/dist/src/commands.js.map +1 -1
  14. package/dist/src/templates/bootstrap.d.ts.map +1 -1
  15. package/dist/src/templates/bootstrap.js +45 -59
  16. package/dist/src/templates/bootstrap.js.map +1 -1
  17. package/dist/src/types.d.ts +2 -10
  18. package/dist/src/types.d.ts.map +1 -1
  19. package/openclaw.plugin.json +3 -16
  20. package/package.json +2 -3
  21. package/skills/idea-generation/SKILL.md +20 -44
  22. package/skills/idea-generation/references/code-mapping.md +3 -3
  23. package/skills/idea-generation/references/idea-template.md +1 -1
  24. package/skills/idea-generation/references/reading-long-papers.md +3 -3
  25. package/skills/metabolism/SKILL.md +80 -36
  26. package/skills/paper-download/SKILL.md +61 -0
  27. package/skills/research-collect/SKILL.md +41 -111
  28. package/skills/research-experiment/SKILL.md +11 -12
  29. package/skills/research-implement/SKILL.md +10 -11
  30. package/skills/research-pipeline/SKILL.md +23 -31
  31. package/skills/research-plan/SKILL.md +7 -11
  32. package/skills/research-review/SKILL.md +21 -22
  33. package/skills/research-survey/SKILL.md +11 -25
  34. package/skills/write-review-paper/SKILL.md +12 -12
  35. package/skills/write-review-paper/references/note-template.md +1 -1
  36. package/skills/write-review-paper/references/survey-template.md +1 -1
  37. package/dist/src/hooks/research-mode.d.ts +0 -22
  38. package/dist/src/hooks/research-mode.d.ts.map +0 -1
  39. package/dist/src/hooks/research-mode.js +0 -35
  40. package/dist/src/hooks/research-mode.js.map +0 -1
  41. package/dist/src/hooks/scientify-cron-autofill.d.ts +0 -15
  42. package/dist/src/hooks/scientify-cron-autofill.d.ts.map +0 -1
  43. package/dist/src/hooks/scientify-cron-autofill.js +0 -156
  44. package/dist/src/hooks/scientify-cron-autofill.js.map +0 -1
  45. package/dist/src/hooks/scientify-signature.d.ts +0 -21
  46. package/dist/src/hooks/scientify-signature.d.ts.map +0 -1
  47. package/dist/src/hooks/scientify-signature.js +0 -150
  48. package/dist/src/hooks/scientify-signature.js.map +0 -1
  49. package/dist/src/knowledge-state/project.d.ts +0 -13
  50. package/dist/src/knowledge-state/project.d.ts.map +0 -1
  51. package/dist/src/knowledge-state/project.js +0 -88
  52. package/dist/src/knowledge-state/project.js.map +0 -1
  53. package/dist/src/knowledge-state/render.d.ts +0 -63
  54. package/dist/src/knowledge-state/render.d.ts.map +0 -1
  55. package/dist/src/knowledge-state/render.js +0 -368
  56. package/dist/src/knowledge-state/render.js.map +0 -1
  57. package/dist/src/knowledge-state/store.d.ts +0 -19
  58. package/dist/src/knowledge-state/store.d.ts.map +0 -1
  59. package/dist/src/knowledge-state/store.js +0 -978
  60. package/dist/src/knowledge-state/store.js.map +0 -1
  61. package/dist/src/knowledge-state/types.d.ts +0 -182
  62. package/dist/src/knowledge-state/types.d.ts.map +0 -1
  63. package/dist/src/knowledge-state/types.js +0 -2
  64. package/dist/src/knowledge-state/types.js.map +0 -1
  65. package/dist/src/literature/subscription-state.d.ts +0 -112
  66. package/dist/src/literature/subscription-state.d.ts.map +0 -1
  67. package/dist/src/literature/subscription-state.js +0 -696
  68. package/dist/src/literature/subscription-state.js.map +0 -1
  69. package/dist/src/research-subscriptions/constants.d.ts +0 -16
  70. package/dist/src/research-subscriptions/constants.d.ts.map +0 -1
  71. package/dist/src/research-subscriptions/constants.js +0 -59
  72. package/dist/src/research-subscriptions/constants.js.map +0 -1
  73. package/dist/src/research-subscriptions/cron-client.d.ts +0 -8
  74. package/dist/src/research-subscriptions/cron-client.d.ts.map +0 -1
  75. package/dist/src/research-subscriptions/cron-client.js +0 -81
  76. package/dist/src/research-subscriptions/cron-client.js.map +0 -1
  77. package/dist/src/research-subscriptions/delivery.d.ts +0 -10
  78. package/dist/src/research-subscriptions/delivery.d.ts.map +0 -1
  79. package/dist/src/research-subscriptions/delivery.js +0 -82
  80. package/dist/src/research-subscriptions/delivery.js.map +0 -1
  81. package/dist/src/research-subscriptions/handlers.d.ts +0 -6
  82. package/dist/src/research-subscriptions/handlers.d.ts.map +0 -1
  83. package/dist/src/research-subscriptions/handlers.js +0 -204
  84. package/dist/src/research-subscriptions/handlers.js.map +0 -1
  85. package/dist/src/research-subscriptions/parse.d.ts +0 -11
  86. package/dist/src/research-subscriptions/parse.d.ts.map +0 -1
  87. package/dist/src/research-subscriptions/parse.js +0 -492
  88. package/dist/src/research-subscriptions/parse.js.map +0 -1
  89. package/dist/src/research-subscriptions/prompt.d.ts +0 -5
  90. package/dist/src/research-subscriptions/prompt.d.ts.map +0 -1
  91. package/dist/src/research-subscriptions/prompt.js +0 -347
  92. package/dist/src/research-subscriptions/prompt.js.map +0 -1
  93. package/dist/src/research-subscriptions/types.d.ts +0 -66
  94. package/dist/src/research-subscriptions/types.d.ts.map +0 -1
  95. package/dist/src/research-subscriptions/types.js +0 -2
  96. package/dist/src/research-subscriptions/types.js.map +0 -1
  97. package/dist/src/research-subscriptions.d.ts +0 -2
  98. package/dist/src/research-subscriptions.d.ts.map +0 -1
  99. package/dist/src/research-subscriptions.js +0 -2
  100. package/dist/src/research-subscriptions.js.map +0 -1
  101. package/dist/src/services/auto-updater.d.ts +0 -15
  102. package/dist/src/services/auto-updater.d.ts.map +0 -1
  103. package/dist/src/services/auto-updater.js +0 -188
  104. package/dist/src/services/auto-updater.js.map +0 -1
  105. package/dist/src/tools/arxiv-download.d.ts +0 -24
  106. package/dist/src/tools/arxiv-download.d.ts.map +0 -1
  107. package/dist/src/tools/arxiv-download.js +0 -177
  108. package/dist/src/tools/arxiv-download.js.map +0 -1
  109. package/dist/src/tools/github-search-tool.d.ts +0 -25
  110. package/dist/src/tools/github-search-tool.d.ts.map +0 -1
  111. package/dist/src/tools/github-search-tool.js +0 -114
  112. package/dist/src/tools/github-search-tool.js.map +0 -1
  113. package/dist/src/tools/openreview-lookup.d.ts +0 -31
  114. package/dist/src/tools/openreview-lookup.d.ts.map +0 -1
  115. package/dist/src/tools/openreview-lookup.js +0 -414
  116. package/dist/src/tools/openreview-lookup.js.map +0 -1
  117. package/dist/src/tools/paper-browser.d.ts +0 -23
  118. package/dist/src/tools/paper-browser.d.ts.map +0 -1
  119. package/dist/src/tools/paper-browser.js +0 -121
  120. package/dist/src/tools/paper-browser.js.map +0 -1
  121. package/dist/src/tools/scientify-cron.d.ts +0 -63
  122. package/dist/src/tools/scientify-cron.d.ts.map +0 -1
  123. package/dist/src/tools/scientify-cron.js +0 -265
  124. package/dist/src/tools/scientify-cron.js.map +0 -1
  125. package/dist/src/tools/scientify-literature-state.d.ts +0 -303
  126. package/dist/src/tools/scientify-literature-state.d.ts.map +0 -1
  127. package/dist/src/tools/scientify-literature-state.js +0 -957
  128. package/dist/src/tools/scientify-literature-state.js.map +0 -1
  129. package/dist/src/tools/unpaywall-download.d.ts +0 -21
  130. package/dist/src/tools/unpaywall-download.d.ts.map +0 -1
  131. package/dist/src/tools/unpaywall-download.js +0 -169
  132. package/dist/src/tools/unpaywall-download.js.map +0 -1
  133. package/dist/src/tools/workspace.d.ts +0 -32
  134. package/dist/src/tools/workspace.d.ts.map +0 -1
  135. package/dist/src/tools/workspace.js +0 -69
  136. package/dist/src/tools/workspace.js.map +0 -1
  137. package/skills/metabolism-init/SKILL.md +0 -80
  138. package/skills/research-subscription/SKILL.md +0 -119
package/dist/src/tools/scientify-literature-state.d.ts DELETED
@@ -1,303 +0,0 @@
1
- export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typebox").TObject<{
2
- action: import("@sinclair/typebox").TString;
3
- scope: import("@sinclair/typebox").TString;
4
- topic: import("@sinclair/typebox").TString;
5
- project_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
6
- preferences: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
7
- max_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
8
- recency_days: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
9
- sources: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
10
- }>>;
11
- papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
12
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
13
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
14
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
15
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
16
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
17
- }>>>;
18
- status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
19
- run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
20
- note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
21
- signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
22
- paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
23
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
24
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
25
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
26
- }>>;
27
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
28
- tags: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
29
- knowledge_state: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
30
- core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
31
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
32
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
33
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
34
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
35
- published_at: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
36
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
37
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
38
- summary: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
39
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
40
- full_text_read: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
41
- read_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
42
- full_text_source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
43
- full_text_ref: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
44
- unread_reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
45
- key_evidence_spans: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
46
- domain: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
47
- subdomains: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
48
- cross_domain_links: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
49
- research_goal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
50
- approach: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
51
- methodology_design: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
52
- key_contributions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
53
- practical_insights: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
54
- must_understand_points: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
55
- limitations: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
56
- evidence_anchors: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
57
- section: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
58
- locator: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
59
- claim: import("@sinclair/typebox").TString;
60
- quote: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
61
- }>>>;
62
- }>>>;
63
- exploration_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
64
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
65
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
66
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
67
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
68
- published_at: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
69
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
70
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
71
- summary: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
72
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
73
- full_text_read: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
74
- read_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
75
- full_text_source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
76
- full_text_ref: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
77
- unread_reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
78
- key_evidence_spans: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
79
- domain: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
80
- subdomains: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
81
- cross_domain_links: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
82
- research_goal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
83
- approach: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
84
- methodology_design: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
85
- key_contributions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
86
- practical_insights: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
87
- must_understand_points: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
88
- limitations: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
89
- evidence_anchors: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
90
- section: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
91
- locator: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
92
- claim: import("@sinclair/typebox").TString;
93
- quote: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
94
- }>>>;
95
- }>>>;
96
- exploration_trace: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
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- query: import("@sinclair/typebox").TString;
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- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
99
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- candidates: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- filtered_to: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
102
- filtered_out_reasons: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
103
- result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
104
- }>>>;
105
- knowledge_changes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
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- type: import("@sinclair/typebox").TString;
107
- statement: import("@sinclair/typebox").TString;
108
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
109
- topic: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
110
- }>>>;
111
- knowledge_updates: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
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- topic: import("@sinclair/typebox").TString;
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- op: import("@sinclair/typebox").TString;
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- content: import("@sinclair/typebox").TString;
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- confidence: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
117
- }>>>;
118
- hypotheses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
119
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- statement: import("@sinclair/typebox").TString;
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- trigger: import("@sinclair/typebox").TString;
122
- dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
124
- feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
125
- impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
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- validation_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- validation_notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- validation_evidence: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
130
- }>>>;
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- run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
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- model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
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- error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
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- notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
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- temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
138
- temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
139
- temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
140
- temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
141
- full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
142
- full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
143
- }>>;
144
- }>>;
145
- }>;
146
- export declare function createScientifyLiteratureStateTool(): {
147
- label: string;
148
- name: string;
149
- description: string;
150
- parameters: import("@sinclair/typebox").TObject<{
151
- action: import("@sinclair/typebox").TString;
152
- scope: import("@sinclair/typebox").TString;
153
- topic: import("@sinclair/typebox").TString;
154
- project_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
155
- preferences: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
156
- max_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
157
- recency_days: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
158
- sources: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
159
- }>>;
160
- papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
161
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
162
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
163
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
164
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
165
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
166
- }>>>;
167
- status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
168
- run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
169
- note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
170
- signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
171
- paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
172
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
173
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
174
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
175
- }>>;
176
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
177
- tags: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
178
- knowledge_state: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
179
- core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
180
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
181
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
182
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
183
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
184
- published_at: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
185
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
186
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
187
- summary: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
188
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
189
- full_text_read: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
190
- read_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
191
- full_text_source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
192
- full_text_ref: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
193
- unread_reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
194
- key_evidence_spans: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
195
- domain: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
196
- subdomains: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
197
- cross_domain_links: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
198
- research_goal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
199
- approach: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
200
- methodology_design: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
201
- key_contributions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
202
- practical_insights: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
203
- must_understand_points: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
204
- limitations: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
205
- evidence_anchors: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
206
- section: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
207
- locator: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
208
- claim: import("@sinclair/typebox").TString;
209
- quote: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
210
- }>>>;
211
- }>>>;
212
- exploration_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
213
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
214
- title: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
215
- url: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
216
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
217
- published_at: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
218
- score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
219
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
220
- summary: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
221
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
222
- full_text_read: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
223
- read_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
224
- full_text_source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
225
- full_text_ref: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
226
- unread_reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
227
- key_evidence_spans: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
228
- domain: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
229
- subdomains: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
230
- cross_domain_links: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
231
- research_goal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
232
- approach: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
233
- methodology_design: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
234
- key_contributions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
235
- practical_insights: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
236
- must_understand_points: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
237
- limitations: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
238
- evidence_anchors: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
239
- section: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
240
- locator: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
241
- claim: import("@sinclair/typebox").TString;
242
- quote: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
243
- }>>>;
244
- }>>>;
245
- exploration_trace: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
246
- query: import("@sinclair/typebox").TString;
247
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
248
- source: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
249
- candidates: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
250
- filtered_to: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
251
- filtered_out_reasons: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
252
- result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
253
- }>>>;
254
- knowledge_changes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
255
- type: import("@sinclair/typebox").TString;
256
- statement: import("@sinclair/typebox").TString;
257
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
258
- topic: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
259
- }>>>;
260
- knowledge_updates: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
261
- topic: import("@sinclair/typebox").TString;
262
- op: import("@sinclair/typebox").TString;
263
- content: import("@sinclair/typebox").TString;
264
- confidence: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
265
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
266
- }>>>;
267
- hypotheses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TObject<{
268
- id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
269
- statement: import("@sinclair/typebox").TString;
270
- trigger: import("@sinclair/typebox").TString;
271
- dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
272
- novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
273
- feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
274
- impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
275
- evidence_ids: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
276
- validation_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
277
- validation_notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
278
- validation_evidence: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
279
- }>>>;
280
- run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
281
- model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
282
- duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
283
- error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
284
- degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
285
- notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
286
- temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
287
- temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
288
- temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
289
- temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
290
- full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
291
- full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
292
- }>>;
293
- }>>;
294
- }>;
295
- execute: (_toolCallId: string, rawArgs: unknown) => Promise<{
296
- content: {
297
- type: "text";
298
- text: string;
299
- }[];
300
- details: unknown;
301
- }>;
302
- };
303
- //# sourceMappingURL=scientify-literature-state.d.ts.map
package/dist/src/tools/scientify-literature-state.d.ts.map DELETED
@@ -1 +0,0 @@
1
- {"version":3,"file":"scientify-literature-state.d.ts","sourceRoot":"","sources":["../../../src/tools/scientify-literature-state.ts"],"names":[],"mappings":"AAkLA,eAAO,MAAM,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA8D7C,CAAC;AAqpBH,wBAAgB,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;2BAOjB,MAAM,WAAW,OAAO;;;;;;;EA2PxD"}