scientify 1.13.6 → 2.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. package/README.en.md +371 -0
  2. package/README.md +167 -356
  3. package/dist/index.d.ts +8 -2
  4. package/dist/index.d.ts.map +1 -1
  5. package/dist/index.js +131 -122
  6. package/dist/index.js.map +1 -1
  7. package/dist/src/cli/research.d.ts +1 -6
  8. package/dist/src/cli/research.d.ts.map +1 -1
  9. package/dist/src/cli/research.js +227 -123
  10. package/dist/src/cli/research.js.map +1 -1
  11. package/dist/src/commands/metabolism-status.d.ts +3 -3
  12. package/dist/src/commands/metabolism-status.d.ts.map +1 -1
  13. package/dist/src/commands/metabolism-status.js +72 -75
  14. package/dist/src/commands/metabolism-status.js.map +1 -1
  15. package/dist/src/commands.d.ts +1 -1
  16. package/dist/src/commands.d.ts.map +1 -1
  17. package/dist/src/commands.js +0 -55
  18. package/dist/src/commands.js.map +1 -1
  19. package/dist/src/hooks/cron-skill-inject.d.ts +6 -7
  20. package/dist/src/hooks/cron-skill-inject.d.ts.map +1 -1
  21. package/dist/src/hooks/cron-skill-inject.js +6 -15
  22. package/dist/src/hooks/cron-skill-inject.js.map +1 -1
  23. package/dist/src/hooks/research-mode.d.ts +1 -1
  24. package/dist/src/hooks/research-mode.d.ts.map +1 -1
  25. package/dist/src/hooks/research-mode.js +24 -101
  26. package/dist/src/hooks/research-mode.js.map +1 -1
  27. package/dist/src/hooks/scientify-signature.d.ts +1 -1
  28. package/dist/src/hooks/scientify-signature.d.ts.map +1 -1
  29. package/dist/src/hooks/scientify-signature.js +2 -5
  30. package/dist/src/hooks/scientify-signature.js.map +1 -1
  31. package/dist/src/knowledge-state/render.d.ts +1 -9
  32. package/dist/src/knowledge-state/render.d.ts.map +1 -1
  33. package/dist/src/knowledge-state/render.js +33 -187
  34. package/dist/src/knowledge-state/render.js.map +1 -1
  35. package/dist/src/knowledge-state/store.d.ts.map +1 -1
  36. package/dist/src/knowledge-state/store.js +65 -1100
  37. package/dist/src/knowledge-state/store.js.map +1 -1
  38. package/dist/src/knowledge-state/types.d.ts +0 -76
  39. package/dist/src/knowledge-state/types.d.ts.map +1 -1
  40. package/dist/src/literature/subscription-state.d.ts +0 -2
  41. package/dist/src/literature/subscription-state.d.ts.map +1 -1
  42. package/dist/src/literature/subscription-state.js +7 -1375
  43. package/dist/src/literature/subscription-state.js.map +1 -1
  44. package/dist/src/research-subscriptions/constants.d.ts +1 -1
  45. package/dist/src/research-subscriptions/constants.js +1 -1
  46. package/dist/src/research-subscriptions/cron-client.d.ts +1 -1
  47. package/dist/src/research-subscriptions/cron-client.d.ts.map +1 -1
  48. package/dist/src/research-subscriptions/delivery.d.ts +1 -1
  49. package/dist/src/research-subscriptions/delivery.d.ts.map +1 -1
  50. package/dist/src/research-subscriptions/handlers.d.ts +1 -1
  51. package/dist/src/research-subscriptions/handlers.d.ts.map +1 -1
  52. package/dist/src/research-subscriptions/handlers.js +10 -20
  53. package/dist/src/research-subscriptions/handlers.js.map +1 -1
  54. package/dist/src/research-subscriptions/parse.d.ts.map +1 -1
  55. package/dist/src/research-subscriptions/parse.js +0 -25
  56. package/dist/src/research-subscriptions/parse.js.map +1 -1
  57. package/dist/src/research-subscriptions/prompt.d.ts +1 -1
  58. package/dist/src/research-subscriptions/prompt.d.ts.map +1 -1
  59. package/dist/src/research-subscriptions/prompt.js +195 -244
  60. package/dist/src/research-subscriptions/prompt.js.map +1 -1
  61. package/dist/src/research-subscriptions/types.d.ts +1 -3
  62. package/dist/src/research-subscriptions/types.d.ts.map +1 -1
  63. package/dist/src/templates/bootstrap.d.ts.map +1 -1
  64. package/dist/src/templates/bootstrap.js +32 -19
  65. package/dist/src/templates/bootstrap.js.map +1 -1
  66. package/dist/src/tools/arxiv-download.d.ts +1 -2
  67. package/dist/src/tools/arxiv-download.d.ts.map +1 -1
  68. package/dist/src/tools/arxiv-search.d.ts +1 -2
  69. package/dist/src/tools/arxiv-search.d.ts.map +1 -1
  70. package/dist/src/tools/github-search-tool.d.ts +1 -2
  71. package/dist/src/tools/github-search-tool.d.ts.map +1 -1
  72. package/dist/src/tools/openalex-search.d.ts +1 -2
  73. package/dist/src/tools/openalex-search.d.ts.map +1 -1
  74. package/dist/src/tools/openreview-lookup.d.ts +1 -2
  75. package/dist/src/tools/openreview-lookup.d.ts.map +1 -1
  76. package/dist/src/tools/paper-browser.d.ts +1 -2
  77. package/dist/src/tools/paper-browser.d.ts.map +1 -1
  78. package/dist/src/tools/result.d.ts +3 -5
  79. package/dist/src/tools/result.d.ts.map +1 -1
  80. package/dist/src/tools/result.js +5 -7
  81. package/dist/src/tools/result.js.map +1 -1
  82. package/dist/src/tools/scientify-cron.d.ts +4 -11
  83. package/dist/src/tools/scientify-cron.d.ts.map +1 -1
  84. package/dist/src/tools/scientify-cron.js +19 -524
  85. package/dist/src/tools/scientify-cron.js.map +1 -1
  86. package/dist/src/tools/scientify-literature-state.d.ts +1 -76
  87. package/dist/src/tools/scientify-literature-state.d.ts.map +1 -1
  88. package/dist/src/tools/scientify-literature-state.js +46 -363
  89. package/dist/src/tools/scientify-literature-state.js.map +1 -1
  90. package/dist/src/tools/unpaywall-download.d.ts +1 -2
  91. package/dist/src/tools/unpaywall-download.d.ts.map +1 -1
  92. package/dist/src/types.d.ts +16 -0
  93. package/dist/src/types.d.ts.map +1 -0
  94. package/dist/src/types.js +2 -0
  95. package/dist/src/types.js.map +1 -0
  96. package/openclaw.plugin.json +4 -2
  97. package/package.json +1 -1
  98. package/skills/metabolism/SKILL.md +2 -0
  99. package/skills/research-subscription/SKILL.md +1 -29
  100. package/README.zh.md +0 -494
package/dist/src/tools/scientify-cron.js.map CHANGED
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1
+ 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package/dist/src/tools/scientify-literature-state.d.ts CHANGED
@@ -17,9 +17,6 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
17
17
  }>>>;
18
18
  status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
19
19
  run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
20
- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
21
- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
22
- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
23
20
  note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
24
21
  signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
25
22
  paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
@@ -122,22 +119,7 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
122
119
  id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
123
120
  statement: import("@sinclair/typebox").TString;
124
121
  trigger: import("@sinclair/typebox").TString;
125
- problem_gap: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
126
- proposed_mechanism: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
127
- novelty_rationale: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
128
122
  dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
129
- falsifiable_predictions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
130
- critical_assumptions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
131
- failure_modes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
132
- success_criteria: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
133
- strengths: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
134
- weaknesses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
135
- plan_steps: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
136
- strict_evaluation: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
137
- overall_score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
138
- decision: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
139
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
140
- }>>;
141
123
  novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
142
124
  feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
143
125
  impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
@@ -148,35 +130,16 @@ export declare const ScientifyLiteratureStateToolSchema: import("@sinclair/typeb
148
130
  }>>>;
149
131
  run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
150
132
  model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
151
- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
152
133
  duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
153
134
  error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
154
135
  degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
155
136
  notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
156
- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
157
- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
158
137
  temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
159
138
  temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
160
139
  temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
161
140
  temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
162
141
  full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
163
142
  full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
164
- recall_tier_stats: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
165
- tier_a: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
166
- candidates: import("@sinclair/typebox").TNumber;
167
- selected: import("@sinclair/typebox").TNumber;
168
- }>>;
169
- tier_b: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
170
- candidates: import("@sinclair/typebox").TNumber;
171
- selected: import("@sinclair/typebox").TNumber;
172
- }>>;
173
- tier_c: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
174
- candidates: import("@sinclair/typebox").TNumber;
175
- selected: import("@sinclair/typebox").TNumber;
176
- }>>;
177
- }>>;
178
- reflection_step_executed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
179
- reflection_step_result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
180
143
  }>>;
181
144
  }>>;
182
145
  }>;
@@ -203,9 +166,6 @@ export declare function createScientifyLiteratureStateTool(): {
203
166
  }>>>;
204
167
  status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
205
168
  run_id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
206
- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
207
- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
208
- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
209
169
  note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
210
170
  signal: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
211
171
  paper: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
@@ -308,22 +268,7 @@ export declare function createScientifyLiteratureStateTool(): {
308
268
  id: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
309
269
  statement: import("@sinclair/typebox").TString;
310
270
  trigger: import("@sinclair/typebox").TString;
311
- problem_gap: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
312
- proposed_mechanism: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
313
- novelty_rationale: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
314
271
  dependency_path: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
315
- falsifiable_predictions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
316
- critical_assumptions: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
317
- failure_modes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
318
- success_criteria: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
319
- strengths: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
320
- weaknesses: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
321
- plan_steps: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TArray<import("@sinclair/typebox").TString>>;
322
- strict_evaluation: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
323
- overall_score: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
324
- decision: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
325
- reason: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
326
- }>>;
327
272
  novelty: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
328
273
  feasibility: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
329
274
  impact: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
@@ -334,45 +279,25 @@ export declare function createScientifyLiteratureStateTool(): {
334
279
  }>>>;
335
280
  run_log: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
336
281
  model: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
337
- run_profile: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
338
282
  duration_ms: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
339
283
  error: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
340
284
  degraded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
341
285
  notes: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
342
- required_core_papers: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
343
- required_full_text_coverage_pct: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
344
286
  temp_full_text_dir: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
345
287
  temp_files_downloaded: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
346
288
  temp_cleanup_status: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
347
289
  temp_cleanup_note: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TString>;
348
290
  full_text_attempted: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
349
291
  full_text_completed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
350
- recall_tier_stats: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
351
- tier_a: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
352
- candidates: import("@sinclair/typebox").TNumber;
353
- selected: import("@sinclair/typebox").TNumber;
354
- }>>;
355
- tier_b: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
356
- candidates: import("@sinclair/typebox").TNumber;
357
- selected: import("@sinclair/typebox").TNumber;
358
- }>>;
359
- tier_c: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TObject<{
360
- candidates: import("@sinclair/typebox").TNumber;
361
- selected: import("@sinclair/typebox").TNumber;
362
- }>>;
363
- }>>;
364
- reflection_step_executed: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TBoolean>;
365
- reflection_step_result_count: import("@sinclair/typebox").TOptional<import("@sinclair/typebox").TNumber>;
366
292
  }>>;
367
293
  }>>;
368
294
  }>;
369
295
  execute: (_toolCallId: string, rawArgs: unknown) => Promise<{
370
- type: "tool_result";
371
296
  content: {
372
297
  type: "text";
373
298
  text: string;
374
299
  }[];
375
- isError?: boolean;
300
+ details: unknown;
376
301
  }>;
377
302
  };
378
303
  //# sourceMappingURL=scientify-literature-state.d.ts.map
package/dist/src/tools/scientify-literature-state.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"scientify-literature-state.d.ts","sourceRoot":"","sources":["../../../src/tools/scientify-literature-state.ts"],"names":[],"mappings":"AAwPA,eAAO,MAAM,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA6E7C,CAAC;AA46BH,wBAAgB,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;2BAOjB,MAAM,WAAW,OAAO;;;;;;;;EAoRxD"}
1
+ {"version":3,"file":"scientify-literature-state.d.ts","sourceRoot":"","sources":["../../../src/tools/scientify-literature-state.ts"],"names":[],"mappings":"AAkLA,eAAO,MAAM,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EA8D7C,CAAC;AAqpBH,wBAAgB,kCAAkC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;2BAOjB,MAAM,WAAW,OAAO;;;;;;;EA2PxD"}