scientify 1.10.0 → 1.10.1

package/dist/src/literature/subscription-state.js

@@ -0,0 +1,521 @@
+import { createHash } from "node:crypto";
+import { mkdir, readFile, rename, writeFile, appendFile } from "node:fs/promises";
+import { existsSync } from "node:fs";
+import path from "node:path";
+const STATE_VERSION = 1;
+const DEFAULT_MAX_PAPERS = 3;
+const DEFAULT_SOURCES = ["openalex", "arxiv"];
+const MAX_MEMORY_NOTES = 30;
+const MAX_MEMORY_KEYS = 60;
+const TOP_HINT_LIMIT = 8;
+const FEEDBACK_SIGNAL_DELTA = {
+    read: 1,
+    skip: -1,
+    star: 2,
+};
+function getStateDir() {
+    const home = process.env.HOME || process.env.USERPROFILE || process.cwd();
+    return path.join(home, ".openclaw", "workspace", "scientify");
+}
+function getStatePath() {
+    return path.join(getStateDir(), "literature-state.json");
+}
+function getPushLogPath() {
+    return path.join(getStateDir(), "literature-push-log.jsonl");
+}
+function normalizeText(raw) {
+    return raw.trim().replace(/\s+/g, " ");
+}
+function normalizeTopic(raw) {
+    return normalizeText(raw).toLowerCase();
+}
+function normalizeScope(raw) {
+    const trimmed = normalizeText(raw).toLowerCase();
+    return trimmed.length > 0 ? trimmed : "global";
+}
+function topicKey(scope, topic) {
+    const hash = createHash("sha1")
+        .update(`${normalizeScope(scope)}\n${normalizeTopic(topic)}`)
+        .digest("hex");
+    return hash.slice(0, 20);
+}
+function dedupeSources(raw) {
+    if (!raw || raw.length === 0)
+        return [...DEFAULT_SOURCES];
+    const seen = new Set();
+    for (const item of raw) {
+        const value = normalizeText(item).toLowerCase();
+        if (value.length === 0)
+            continue;
+        seen.add(value);
+    }
+    if (seen.size === 0)
+        return [...DEFAULT_SOURCES];
+    return [...seen];
+}
+function mergePreferences(base, incoming) {
+    const maxPapersRaw = incoming?.maxPapers ?? base?.maxPapers ?? DEFAULT_MAX_PAPERS;
+    const maxPapers = Number.isFinite(maxPapersRaw)
+        ? Math.min(20, Math.max(1, Math.floor(maxPapersRaw)))
+        : DEFAULT_MAX_PAPERS;
+    const recencyRaw = incoming?.recencyDays ?? base?.recencyDays;
+    const recencyDays = recencyRaw !== undefined && Number.isFinite(recencyRaw) && recencyRaw > 0
+        ? Math.min(3650, Math.floor(recencyRaw))
+        : undefined;
+    const sources = dedupeSources(incoming?.sources ?? base?.sources);
+    return {
+        maxPapers,
+        ...(recencyDays ? { recencyDays } : {}),
+        sources,
+    };
+}
+function defaultState() {
+    return {
+        version: STATE_VERSION,
+        updatedAtMs: Date.now(),
+        topics: {},
+    };
+}
+function defaultTopicMemoryState() {
+    return {
+        feedbackCounts: {
+            read: 0,
+            skip: 0,
+            star: 0,
+        },
+        keywordScores: {},
+        sourceScores: {},
+        recentNotes: [],
+    };
+}
+async function ensureStateDir() {
+    await mkdir(getStateDir(), { recursive: true });
+}
+async function loadState() {
+    const file = getStatePath();
+    if (!existsSync(file))
+        return defaultState();
+    try {
+        const raw = await readFile(file, "utf-8");
+        const parsed = JSON.parse(raw);
+        if (parsed.version !== STATE_VERSION || !parsed.topics || typeof parsed.topics !== "object") {
+            return defaultState();
+        }
+        return {
+            version: STATE_VERSION,
+            updatedAtMs: typeof parsed.updatedAtMs === "number" ? parsed.updatedAtMs : Date.now(),
+            topics: parsed.topics,
+        };
+    }
+    catch {
+        return defaultState();
+    }
+}
+async function saveState(state) {
+    await ensureStateDir();
+    state.updatedAtMs = Date.now();
+    const file = getStatePath();
+    const tmp = `${file}.tmp`;
+    await writeFile(tmp, JSON.stringify(state, null, 2), "utf-8");
+    await rename(tmp, file);
+}
+function normalizePaperId(raw) {
+    if (!raw)
+        return undefined;
+    const normalized = normalizeText(raw).toLowerCase();
+    if (!normalized)
+        return undefined;
+    return normalized;
+}
+function extractArxivId(text) {
+    const m = text.match(/\b(\d{4}\.\d{4,5}(?:v\d+)?)\b/i);
+    if (m?.[1])
+        return `arxiv:${m[1].toLowerCase()}`;
+    return undefined;
+}
+function extractDoi(text) {
+    const m = text.match(/\b(10\.\d{4,9}\/[-._;()/:a-z0-9]+)\b/i);
+    if (m?.[1])
+        return `doi:${m[1].toLowerCase()}`;
+    return undefined;
+}
+function derivePaperId(paper) {
+    const explicit = normalizePaperId(paper.id);
+    if (explicit)
+        return explicit;
+    const text = [paper.url, paper.title].filter((part) => Boolean(part)).join(" ");
+    const arxiv = extractArxivId(text);
+    if (arxiv)
+        return arxiv;
+    const doi = extractDoi(text);
+    if (doi)
+        return doi;
+    const fallback = normalizeText(`${paper.title ?? ""} ${paper.url ?? ""}`);
+    const digest = createHash("sha1").update(fallback || JSON.stringify(paper)).digest("hex");
+    return `hash:${digest.slice(0, 20)}`;
+}
+function sanitizeKeyword(raw) {
+    const normalized = normalizeText(raw).toLowerCase();
+    if (normalized.length < 2 || normalized.length > 48)
+        return undefined;
+    return normalized;
+}
+function tokenizeKeywords(raw) {
+    const tokens = raw.match(/[\p{L}\p{N}][\p{L}\p{N}_-]{1,47}/gu) ?? [];
+    const seen = new Set();
+    for (const token of tokens) {
+        const keyword = sanitizeKeyword(token);
+        if (!keyword)
+            continue;
+        seen.add(keyword);
+    }
+    return [...seen];
+}
+function normalizeSource(raw) {
+    if (!raw)
+        return undefined;
+    const value = raw.trim().toLowerCase();
+    if (!value)
+        return undefined;
+    const direct = value.replace(/^https?:\/\//, "").replace(/^www\./, "").split("/")[0];
+    const host = direct.length > 0 ? direct : value;
+    if (host.includes("arxiv"))
+        return "arxiv";
+    if (host.includes("openalex"))
+        return "openalex";
+    if (host.includes("doi.org"))
+        return "doi";
+    if (host.includes("semanticscholar"))
+        return "semanticscholar";
+    if (host.includes("nature"))
+        return "nature";
+    if (host.includes("ieeexplore"))
+        return "ieee";
+    if (host.includes("acm.org"))
+        return "acm";
+    if (host.includes("sciencedirect"))
+        return "sciencedirect";
+    return host;
+}
+function sourceFromPaper(paper) {
+    const url = paper?.url?.trim();
+    if (!url)
+        return undefined;
+    try {
+        const host = new URL(url).host;
+        return normalizeSource(host);
+    }
+    catch {
+        return normalizeSource(url);
+    }
+}
+function updateScoreMap(map, key, delta) {
+    const current = map[key] ?? 0;
+    const next = Math.max(-20, Math.min(20, current + delta));
+    if (Math.abs(next) < 0.01) {
+        delete map[key];
+        return;
+    }
+    map[key] = Number(next.toFixed(2));
+}
+function limitScoreMap(map) {
+    const items = Object.entries(map)
+        .filter(([, value]) => Number.isFinite(value) && value !== 0)
+        .sort((a, b) => Math.abs(b[1]) - Math.abs(a[1]))
+        .slice(0, MAX_MEMORY_KEYS);
+    const trimmed = {};
+    for (const [key, value] of items) {
+        trimmed[key] = value;
+    }
+    return trimmed;
+}
+function ensureTopicMemoryState(topicState) {
+    const memory = topicState.memory;
+    if (!memory || typeof memory !== "object") {
+        topicState.memory = defaultTopicMemoryState();
+        return topicState.memory;
+    }
+    if (!memory.feedbackCounts || typeof memory.feedbackCounts !== "object") {
+        memory.feedbackCounts = { read: 0, skip: 0, star: 0 };
+    }
+    for (const key of ["read", "skip", "star"]) {
+        const raw = memory.feedbackCounts[key];
+        memory.feedbackCounts[key] = Number.isFinite(raw) ? Math.max(0, Math.floor(raw)) : 0;
+    }
+    if (!memory.keywordScores || typeof memory.keywordScores !== "object") {
+        memory.keywordScores = {};
+    }
+    else {
+        memory.keywordScores = limitScoreMap(memory.keywordScores);
+    }
+    if (!memory.sourceScores || typeof memory.sourceScores !== "object") {
+        memory.sourceScores = {};
+    }
+    else {
+        memory.sourceScores = limitScoreMap(memory.sourceScores);
+    }
+    if (!Array.isArray(memory.recentNotes)) {
+        memory.recentNotes = [];
+    }
+    else {
+        memory.recentNotes = memory.recentNotes
+            .filter((item) => item &&
+            typeof item === "object" &&
+            Number.isFinite(item.ts) &&
+            typeof item.signal === "string" &&
+            typeof item.text === "string")
+            .slice(-MAX_MEMORY_NOTES)
+            .map((item) => ({
+            ts: Math.floor(item.ts),
+            signal: item.signal,
+            text: normalizeText(item.text),
+        }));
+    }
+    if (!Number.isFinite(memory.lastFeedbackAtMs)) {
+        delete memory.lastFeedbackAtMs;
+    }
+    return memory;
+}
+function topKeysByScore(map, polarity, limit) {
+    const threshold = 0.1;
+    const entries = Object.entries(map).filter(([, score]) => polarity === "positive" ? score > threshold : score < -threshold);
+    entries.sort((a, b) => (polarity === "positive" ? b[1] - a[1] : a[1] - b[1]));
+    return entries.slice(0, limit).map(([key]) => key);
+}
+function buildMemoryHints(memory) {
+    return {
+        preferredKeywords: topKeysByScore(memory.keywordScores, "positive", TOP_HINT_LIMIT),
+        avoidedKeywords: topKeysByScore(memory.keywordScores, "negative", TOP_HINT_LIMIT),
+        preferredSources: topKeysByScore(memory.sourceScores, "positive", 4),
+        avoidedSources: topKeysByScore(memory.sourceScores, "negative", 4),
+        feedbackCounts: {
+            read: memory.feedbackCounts.read,
+            skip: memory.feedbackCounts.skip,
+            star: memory.feedbackCounts.star,
+        },
+        ...(memory.lastFeedbackAtMs ? { lastFeedbackAtMs: memory.lastFeedbackAtMs } : {}),
+    };
+}
+function getOrCreateTopicState(root, scope, topic, incomingPrefs) {
+    const normalizedScope = normalizeScope(scope);
+    const normalizedTopicDisplay = normalizeText(topic);
+    const key = topicKey(normalizedScope, normalizedTopicDisplay);
+    const existing = root.topics[key];
+    if (existing) {
+        existing.scope = normalizedScope;
+        existing.topic = normalizedTopicDisplay;
+        ensureTopicMemoryState(existing);
+        if (!existing.pushedPapers || typeof existing.pushedPapers !== "object") {
+            existing.pushedPapers = {};
+        }
+        if (!Number.isFinite(existing.totalRuns)) {
+            existing.totalRuns = 0;
+        }
+        existing.preferences = mergePreferences(existing.preferences, incomingPrefs);
+        return existing;
+    }
+    const created = {
+        scope: normalizedScope,
+        topic: normalizedTopicDisplay,
+        topicKey: key,
+        preferences: mergePreferences(undefined, incomingPrefs),
+        memory: defaultTopicMemoryState(),
+        pushedPapers: {},
+        totalRuns: 0,
+    };
+    root.topics[key] = created;
+    return created;
+}
+function sortPaperIdsByRecency(papers) {
+    return Object.values(papers)
+        .sort((a, b) => b.lastPushedAtMs - a.lastPushedAtMs)
+        .map((item) => item.id);
+}
+async function appendPushLog(entry) {
+    await ensureStateDir();
+    await appendFile(getPushLogPath(), `${JSON.stringify(entry)}\n`, "utf-8");
+}
+export async function prepareIncrementalState(args) {
+    const root = await loadState();
+    const topicState = getOrCreateTopicState(root, args.scope, args.topic, args.preferences);
+    const memory = ensureTopicMemoryState(topicState);
+    await saveState(root);
+    const excludePaperIds = sortPaperIdsByRecency(topicState.pushedPapers);
+    const lastPushedAtMs = excludePaperIds.length
+        ? topicState.pushedPapers[excludePaperIds[0]]?.lastPushedAtMs
+        : undefined;
+    return {
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        preferences: topicState.preferences,
+        memoryHints: buildMemoryHints(memory),
+        excludePaperIds,
+        knownPaperCount: excludePaperIds.length,
+        ...(lastPushedAtMs ? { lastPushedAtMs } : {}),
+    };
+}
+export async function recordIncrementalPush(args) {
+    const root = await loadState();
+    const topicState = getOrCreateTopicState(root, args.scope, args.topic, args.preferences);
+    const memory = ensureTopicMemoryState(topicState);
+    const now = Date.now();
+    let recordedPapers = 0;
+    for (const rawPaper of args.papers) {
+        const id = derivePaperId(rawPaper);
+        const existing = topicState.pushedPapers[id];
+        if (existing) {
+            existing.lastPushedAtMs = now;
+            existing.pushCount += 1;
+            if (rawPaper.title)
+                existing.title = rawPaper.title.trim();
+            if (rawPaper.url)
+                existing.url = rawPaper.url.trim();
+            if (typeof rawPaper.score === "number" && Number.isFinite(rawPaper.score)) {
+                existing.lastScore = rawPaper.score;
+            }
+            if (rawPaper.reason) {
+                existing.lastReason = rawPaper.reason.trim();
+            }
+        }
+        else {
+            topicState.pushedPapers[id] = {
+                id,
+                title: rawPaper.title?.trim(),
+                url: rawPaper.url?.trim(),
+                ...(typeof rawPaper.score === "number" && Number.isFinite(rawPaper.score)
+                    ? { lastScore: rawPaper.score }
+                    : {}),
+                ...(rawPaper.reason ? { lastReason: rawPaper.reason.trim() } : {}),
+                firstPushedAtMs: now,
+                lastPushedAtMs: now,
+                pushCount: 1,
+            };
+        }
+        recordedPapers += 1;
+    }
+    topicState.totalRuns += 1;
+    topicState.lastRunAtMs = now;
+    topicState.lastStatus = args.status?.trim() || (recordedPapers > 0 ? "ok" : "empty");
+    await saveState(root);
+    await appendPushLog({
+        ts: now,
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        status: topicState.lastStatus,
+        runId: args.runId,
+        preferences: topicState.preferences,
+        recordedPapers,
+        papers: args.papers.map((paper) => ({
+            id: derivePaperId(paper),
+            title: paper.title?.trim(),
+            url: paper.url?.trim(),
+            ...(typeof paper.score === "number" && Number.isFinite(paper.score) ? { score: paper.score } : {}),
+            ...(paper.reason ? { reason: paper.reason.trim() } : {}),
+        })),
+        note: args.note,
+    });
+    return {
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        preferences: topicState.preferences,
+        memoryHints: buildMemoryHints(memory),
+        recordedPapers,
+        totalKnownPapers: Object.keys(topicState.pushedPapers).length,
+        pushedAtMs: now,
+    };
+}
+export async function recordUserFeedback(args) {
+    const root = await loadState();
+    const topicState = getOrCreateTopicState(root, args.scope, args.topic, args.preferences);
+    const memory = ensureTopicMemoryState(topicState);
+    const now = Date.now();
+    const signal = args.feedback.signal;
+    const delta = FEEDBACK_SIGNAL_DELTA[signal];
+    memory.feedbackCounts[signal] += 1;
+    memory.lastFeedbackAtMs = now;
+    const keywords = new Set();
+    for (const tag of args.feedback.tags ?? []) {
+        const normalized = sanitizeKeyword(tag);
+        if (normalized)
+            keywords.add(normalized);
+    }
+    if (args.feedback.note) {
+        for (const token of tokenizeKeywords(args.feedback.note)) {
+            keywords.add(token);
+        }
+    }
+    if (args.feedback.paper?.title) {
+        for (const token of tokenizeKeywords(args.feedback.paper.title)) {
+            keywords.add(token);
+        }
+    }
+    for (const keyword of keywords) {
+        updateScoreMap(memory.keywordScores, keyword, delta);
+    }
+    memory.keywordScores = limitScoreMap(memory.keywordScores);
+    const source = normalizeSource(args.feedback.source) ?? sourceFromPaper(args.feedback.paper);
+    if (source) {
+        updateScoreMap(memory.sourceScores, source, delta);
+        memory.sourceScores = limitScoreMap(memory.sourceScores);
+    }
+    const noteText = normalizeText(args.feedback.note ?? "");
+    if (noteText.length > 0) {
+        memory.recentNotes.push({
+            ts: now,
+            signal,
+            text: noteText,
+        });
+        if (memory.recentNotes.length > MAX_MEMORY_NOTES) {
+            memory.recentNotes = memory.recentNotes.slice(-MAX_MEMORY_NOTES);
+        }
+    }
+    await saveState(root);
+    await appendPushLog({
+        ts: now,
+        event: "feedback",
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        signal,
+        source: source ?? null,
+        tags: [...keywords],
+        note: noteText || undefined,
+        runId: args.feedback.runId,
+        memoryHints: buildMemoryHints(memory),
+    });
+    return {
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        signal,
+        preferences: topicState.preferences,
+        memoryHints: buildMemoryHints(memory),
+        updatedAtMs: now,
+    };
+}
+export async function getIncrementalStateStatus(args) {
+    const root = await loadState();
+    const topicState = getOrCreateTopicState(root, args.scope, args.topic);
+    const memory = ensureTopicMemoryState(topicState);
+    await saveState(root);
+    const excludePaperIds = sortPaperIdsByRecency(topicState.pushedPapers);
+    const lastPushedAtMs = excludePaperIds.length
+        ? topicState.pushedPapers[excludePaperIds[0]]?.lastPushedAtMs
+        : undefined;
+    return {
+        scope: topicState.scope,
+        topic: topicState.topic,
+        topicKey: topicState.topicKey,
+        preferences: topicState.preferences,
+        memoryHints: buildMemoryHints(memory),
+        excludePaperIds,
+        knownPaperCount: excludePaperIds.length,
+        ...(lastPushedAtMs ? { lastPushedAtMs } : {}),
+        totalRuns: topicState.totalRuns,
+        ...(topicState.lastStatus ? { lastStatus: topicState.lastStatus } : {}),
+    };
+}
+//# sourceMappingURL=subscription-state.js.map

package/dist/src/literature/subscription-state.js.map

@@ -0,0 +1 @@
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package/dist/src/research-subscriptions/constants.d.ts

@@ -0,0 +1,16 @@
+import type { ScoreWeights } from "./types.js";
+export declare const DEFAULT_TIME = "09:00";
+export declare const DEFAULT_TZ = "Asia/Shanghai";
+export declare const DEFAULT_CRON_PROMPT = "/research-pipeline Run an incremental literature check for the active project. Only report if there are newly relevant papers: provide 3 concise highlights with sources. If no increment is found, reply with 'No new literature found.'";
+export declare const SCIENTIFY_SIGNATURE_FOOTER = "---\n\uD83D\uDC0DScientify";
+export declare const REMINDER_HINT_RE: RegExp;
+export declare const RESEARCH_HINT_RE: RegExp;
+export declare const ALLOWED_DELIVERY_CHANNELS: Set<string>;
+export declare const DELIVERY_LAST_ALIASES: Set<string>;
+export declare const WEEKDAY_MAP: Record<string, number>;
+export declare const DEFAULT_SCORE_WEIGHTS: ScoreWeights;
+export declare const SCORE_WEIGHT_KEYS: readonly ["relevance", "novelty", "authority", "actionability"];
+export declare const MIN_CANDIDATE_POOL = 3;
+export declare const MAX_CANDIDATE_POOL = 50;
+export declare const DEFAULT_CANDIDATE_POOL = 10;
+//# sourceMappingURL=constants.d.ts.map

package/dist/src/research-subscriptions/constants.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/research-subscriptions/constants.js

@@ -0,0 +1,59 @@
+export const DEFAULT_TIME = "09:00";
+export const DEFAULT_TZ = "Asia/Shanghai";
+export const DEFAULT_CRON_PROMPT = "/research-pipeline Run an incremental literature check for the active project. Only report if there are newly relevant papers: provide 3 concise highlights with sources. If no increment is found, reply with 'No new literature found.'";
+export const SCIENTIFY_SIGNATURE_FOOTER = "---\n🐍Scientify";
+export const REMINDER_HINT_RE = /\b(remind(?:er)?|remember|alarm|wake|break|sleep|coffee|water|drink)\b|提醒|记得|闹钟|休息|喝水|喝咖啡|睡觉/u;
+export const RESEARCH_HINT_RE = /\b(research|paper|papers|survey|literature|arxiv|openalex|citation|benchmark|dataset|model)\b|论文|文献|研究|综述|检索|引用|实验/u;
+export const ALLOWED_DELIVERY_CHANNELS = new Set([
+    "telegram",
+    "whatsapp",
+    "discord",
+    "irc",
+    "googlechat",
+    "slack",
+    "signal",
+    "imessage",
+    "feishu",
+    "nostr",
+    "msteams",
+    "mattermost",
+    "nextcloud-talk",
+    "matrix",
+    "bluebubbles",
+    "line",
+    "zalo",
+    "zalouser",
+    "synology-chat",
+    "tlon",
+]);
+export const DELIVERY_LAST_ALIASES = new Set(["last", "webui", "tui"]);
+export const WEEKDAY_MAP = {
+    sun: 0,
+    sunday: 0,
+    mon: 1,
+    monday: 1,
+    tue: 2,
+    tues: 2,
+    tuesday: 2,
+    wed: 3,
+    wednesday: 3,
+    thu: 4,
+    thur: 4,
+    thurs: 4,
+    thursday: 4,
+    fri: 5,
+    friday: 5,
+    sat: 6,
+    saturday: 6,
+};
+export const DEFAULT_SCORE_WEIGHTS = {
+    relevance: 40,
+    novelty: 20,
+    authority: 30,
+    actionability: 10,
+};
+export const SCORE_WEIGHT_KEYS = ["relevance", "novelty", "authority", "actionability"];
+export const MIN_CANDIDATE_POOL = 3;
+export const MAX_CANDIDATE_POOL = 50;
+export const DEFAULT_CANDIDATE_POOL = 10;
+//# sourceMappingURL=constants.js.map

package/dist/src/research-subscriptions/constants.js.map

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package/dist/src/research-subscriptions/cron-client.d.ts

@@ -0,0 +1,8 @@
+import type { RunCommandResult } from "openclaw";
+import type { CronCommandDeps, CronJob } from "./types.js";
+export declare function runCommand(deps: CronCommandDeps, argv: string[], timeoutMs?: number): Promise<RunCommandResult>;
+export declare function parseJsonFromOutput<T>(stdout: string): T | null;
+export declare function listAllJobs(deps: CronCommandDeps): Promise<CronJob[]>;
+export declare function ensureJobEnabled(deps: CronCommandDeps, jobId: string): Promise<CronJob | undefined>;
+export declare function scheduleText(job: CronJob): string;
+//# sourceMappingURL=cron-client.d.ts.map

package/dist/src/research-subscriptions/cron-client.d.ts.map

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