schematex 0.3.0 → 0.3.2

package/dist/chunk-45KP67RR.js.map

@@ -1 +0,0 @@
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+= ` L ${x},${y}`;\n  };\n  const flushLine = () => {\n    if (linePath) {\n      paths.push(linePath);\n      linePath = \"\";\n    }\n  };\n\n  const closeBus = (x: number) => {\n    const start = busStartX;\n    const end = x;\n    const inset = Math.min(5, (end - start) / 2);\n    // Trapezoid outline\n    const d = `M ${start + inset},${yHi} L ${end - inset},${yHi} L ${end},${yMid} L ${end - inset},${yLo} L ${start + inset},${yLo} L ${start},${yMid} Z`;\n    busRects.push(\n      el(\"path\", { class: \"schematex-timing-bus\", d, \"data-bus-index\": String(busIndex) })\n    );\n    // Data label\n    const label = signal.data?.[dataIdx] ?? \"\";\n    if (label) {\n      busTexts.push(\n        text(\n          {\n            x: (start + end) / 2,\n            y: yMid + 4,\n            class: \"schematex-timing-bus-label\",\n            \"text-anchor\": \"middle\",\n          },\n          label\n        )\n      );\n    }\n    dataIdx++;\n    busIndex++;\n  };\n\n  for (let i = 0; i < wave.length; i++) {\n    const ch = wave[i];\n    const x = i * pw;\n    const xNext = x + pw;\n\n    // Handle continuation '.'\n    const effective = ch === \".\" ? prevChar : ch;\n\n    switch (effective) {\n      case \"0\":\n      case \"l\":\n      case \"L\": {\n        if (prev === \"bus\") closeBus(x);\n        if (prev === \"x\" || prev === \"z\" || prev === \"none\" || prev === \"bus\") {\n          flushLine();\n          startLine(x, yLo);\n        } else if (prev === \"hi\") {\n          extendLineTo(x, yLo);\n        }\n        extendLineTo(xNext, yLo);\n        prev = \"lo\";\n        break;\n      }\n      case \"1\":\n      case \"h\":\n      case \"H\": {\n        if (prev === \"bus\") closeBus(x);\n        if (prev === \"x\" || prev === \"z\" || prev === \"none\" || prev === \"bus\") {\n          flushLine();\n          startLine(x, yHi);\n        } else if (prev === \"lo\") {\n          extendLineTo(x, yHi);\n        }\n        extendLineTo(xNext, yHi);\n        prev = \"hi\";\n        break;\n      }\n      case \"p\":\n      case \"P\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        // One-period positive clock: lo→hi at x, hi until midpoint, lo at mid, lo until xNext\n        startLine(x, yLo);\n        extendLineTo(x, yHi);\n        extendLineTo(x + pw / 2, yHi);\n        extendLineTo(x + pw / 2, yLo);\n        extendLineTo(xNext, yLo);\n        flushLine();\n        prev = \"lo\";\n        break;\n      }\n      case \"n\":\n      case \"N\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        startLine(x, yHi);\n        extendLineTo(x, yLo);\n        extendLineTo(x + pw / 2, yLo);\n        extendLineTo(x + pw / 2, yHi);\n        extendLineTo(xNext, yHi);\n        flushLine();\n        prev = \"hi\";\n        break;\n      }\n      case \"u\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        startLine(x, yLo);\n        extendLineTo(xNext, yHi);\n        prev = \"hi\";\n        break;\n      }\n      case \"d\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        startLine(x, yHi);\n        extendLineTo(xNext, yLo);\n        prev = \"lo\";\n        break;\n      }\n      case \"z\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        zLines.push(\n          el(\"line\", {\n            x1: x,\n            y1: yMid,\n            x2: xNext,\n            y2: yMid,\n            class: \"schematex-timing-hiz\",\n          })\n        );\n        prev = \"z\";\n        break;\n      }\n      case \"x\": {\n        if (prev === \"bus\") closeBus(x);\n        flushLine();\n        xPatchRects.push(\n          el(\"rect\", {\n            x,\n            y: yHi,\n            width: pw,\n            height: yLo - yHi,\n            class: \"schematex-timing-unknown\",\n            fill: \"url(#schematex-timing-xhatch)\",\n          })\n        );\n        prev = \"x\";\n        break;\n      }\n      case \"=\":\n      case \"2\":\n      case \"3\":\n      case \"4\":\n      case \"5\":\n      case \"6\":\n      case \"7\":\n      case \"8\":\n      case \"9\": {\n        // Each fresh bus char (not '.') begins a new segment.\n        const isContinuation = ch === \".\";\n        if (!isContinuation && prev === \"bus\") closeBus(x);\n        if (prev !== \"bus\" || !isContinuation) {\n          flushLine();\n          busStartX = x;\n        }\n        prev = \"bus\";\n        break;\n      }\n      default: {\n        // unknown char -> treat as x\n        flushLine();\n        xPatchRects.push(\n          el(\"rect\", {\n            x,\n            y: yHi,\n            width: pw,\n            height: yLo - yHi,\n            class: \"schematex-timing-unknown\",\n            fill: \"url(#schematex-timing-xhatch)\",\n          })\n        );\n        prev = \"x\";\n      }\n    }\n\n    prevChar = effective;\n  }\n\n  // Close trailing bus\n  if (prev === \"bus\") closeBus(wave.length * pw);\n  flushLine();\n\n  const waveSvg = paths\n    .map((d) => el(\"path\", { class: \"schematex-timing-wave\", d }))\n    .concat(xPatchRects, zLines, busRects)\n    .join(\"\");\n\n  return { svg: waveSvg, labels: busTexts.join(\"\") };\n}\n\nexport function renderTiming(ast: TimingAST): string {\n  const pw = DEFAULT_PW * (ast.hscale ?? 1);\n  const rows = flatten(ast.signals);\n  const maxWaveLen = Math.max(\n    1,\n    ...rows.filter((r) => r.kind === \"signal\").map((r) => (r as any).signal.wave.length)\n  );\n  const waveAreaW = maxWaveLen * pw;\n  const width = NAME_W + waveAreaW + 20;\n\n  let y = PAD_TOP;\n  const rowYs: number[] = [];\n  for (const r of rows) {\n    rowYs.push(y);\n    y += r.kind === \"group\" ? GROUP_LABEL_H : SIG_H;\n  }\n  const height = y + PAD_BOT + 10;\n\n  // Render rows\n  const waveSvgs: string[] = [];\n  const labelSvgs: string[] = [];\n  const nameSvgs: string[] = [];\n  const gridLines: string[] = [];\n\n  // Grid: vertical period ticks across signal area\n  for (let i = 0; i <= maxWaveLen; i++) {\n    const xg = NAME_W + i * pw;\n    gridLines.push(\n      el(\"line\", {\n        x1: xg,\n        y1: PAD_TOP,\n        x2: xg,\n        y2: height - PAD_BOT,\n        class: \"schematex-timing-grid\",\n      })\n    );\n  }\n\n  for (let i = 0; i < rows.length; i++) {\n    const row = rows[i];\n    const ry = rowYs[i];\n\n    if (row.kind === \"group\") {\n      nameSvgs.push(\n        text(\n          {\n            x: 6 + row.indent * 10,\n            y: ry + GROUP_LABEL_H - 6,\n            class: \"schematex-timing-group-label\",\n          },\n          row.label\n        )\n      );\n      continue;\n    }\n\n    const signal = row.signal;\n    const yHi = ry + PAD_V;\n    const yLo = ry + SIG_H - PAD_V;\n    const yMid = ry + SIG_H / 2;\n\n    // Signal name (right-aligned in name column). `~NAME` or `/NAME` → overlined active-low.\n    const activeLow = signal.name.startsWith(\"~\") || signal.name.startsWith(\"/\");\n    const displayName = activeLow ? signal.name.slice(1) : signal.name;\n    nameSvgs.push(\n      text(\n        {\n          x: NAME_W - 8,\n          y: yMid + 4,\n          class: activeLow\n            ? \"schematex-timing-name schematex-timing-name-activelow\"\n            : \"schematex-timing-name\",\n          \"text-anchor\": \"end\",\n        },\n        displayName\n      )\n    );\n\n    const { svg, labels } = renderWave(signal, {\n      pw,\n      yHi,\n      yLo,\n      yMid,\n      h: SIG_H - 2 * PAD_V,\n    });\n\n    waveSvgs.push(\n      group(\n        {\n          transform: `translate(${NAME_W}, 0)`,\n          \"data-signal\": signal.name,\n        },\n        [svg]\n      )\n    );\n    labelSvgs.push(\n      group({ transform: `translate(${NAME_W}, 0)` }, [labels])\n    );\n  }\n\n  const xhatch = el(\n    \"pattern\",\n    {\n      id: \"schematex-timing-xhatch\",\n      patternUnits: \"userSpaceOnUse\",\n      width: 6,\n      height: 6,\n    },\n    [\n      el(\"rect\", { x: 0, y: 0, width: 6, height: 6, fill: \"#f5f5f5\" }),\n      el(\"path\", {\n        d: \"M 0,6 L 6,0 M -1,1 L 1,-1 M 5,7 L 7,5\",\n        stroke: \"#999\",\n        \"stroke-width\": 0.8,\n      }),\n    ]\n  );\n\n  const css = `\n.schematex-timing { background: #fff; font-family: system-ui, -apple-system, sans-serif; }\n.schematex-timing-name { font: 12px monospace; fill: #111; }\n.schematex-timing-name-activelow { text-decoration: overline; }\n.schematex-timing-group-label { font: bold 12px sans-serif; fill: #111; }\n.schematex-timing-wave { stroke: #111; stroke-width: 1.75; fill: none; stroke-linejoin: miter; stroke-linecap: square; }\n.schematex-timing-bus { fill: none; stroke: #111; stroke-width: 1.5; }\n.schematex-timing-bus-label { font: 11px monospace; fill: #111; }\n.schematex-timing-unknown { stroke: #555; stroke-width: 0.5; }\n.schematex-timing-hiz { stroke: #555; stroke-width: 1.5; stroke-dasharray: 4 3; }\n.schematex-timing-grid { stroke: #eee; stroke-width: 0.5; }\n`.trim();\n\n  return svgRoot(\n    {\n      class: \"schematex-timing\",\n      viewBox: `0 0 ${width} ${height}`,\n      width,\n      height,\n      role: \"img\",\n      \"data-diagram-type\": \"timing\",\n    },\n    [\n      titleEl(ast.title ?? \"Timing Diagram\"),\n      desc(`Digital timing diagram with ${rows.filter((r) => r.kind === \"signal\").length} signals`),\n      defs([xhatch, el(\"style\", {}, css)]),\n      group({ class: \"schematex-timing-grid-g\" }, gridLines),\n      group({ class: \"schematex-timing-waves\" }, waveSvgs),\n      group({ class: \"schematex-timing-labels\" }, labelSvgs),\n      group({ class: \"schematex-timing-names\" }, nameSvgs),\n      ast.title\n        ? text(\n            {\n              x: width / 2,\n              y: 14,\n              \"text-anchor\": \"middle\",\n              class: \"schematex-timing-title\",\n              style: \"font: bold 13px sans-serif; fill: #333;\",\n            },\n            ast.title\n          )\n        : \"\",\n    ]\n  );\n}\n","import type { DiagramPlugin } from \"../../core/types\";\nimport { parseTiming } from \"./parser\";\nimport { renderTiming } from \"./renderer\";\n\nexport const timing: DiagramPlugin = {\n  type: \"timing\",\n  detect(text: string): boolean {\n    const first = text.trim().split(\"\\n\")[0]?.trim().toLowerCase() ?? \"\";\n    return first.startsWith(\"timing\");\n  },\n  parse: parseTiming,\n\n  render(text: string): string {\n    const ast = parseTiming(text);\n    return renderTiming(ast);\n  },\n};\n\nexport { parseTiming } from \"./parser\";\nexport { renderTiming } from \"./renderer\";\n"]}

package/dist/chunk-B37IKTI7.cjs.map

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type {\n  DiagramAST,\n  Individual,\n  LegendOverrides,\n  Relationship,\n  RelationshipType,\n  GeneticStatus,\n  IndividualMarker,\n  LegendEntry,\n  ConditionFill,\n} from \"../../core/types\";\nimport { parseLegendDirective } from \"../../core/legend-parser\";\n\n// ─── ParseError ─────────────────────────────────────────────\n\nexport class PedigreeParseError extends Error {\n  constructor(message: string, public line: number) {\n    super(`Line ${line}: ${message}`);\n    this.name = \"PedigreeParseError\";\n  }\n}\n\n// ─── Couple operators ───────────────────────────────────────\n\nconst COUPLE_OPS: Array<{ token: string; type: RelationshipType }> = [\n  { token: \"-/-\", type: \"separated\" },\n  { token: \"==\", type: \"consanguineous\" },\n  { token: \"--\", type: \"married\" },\n  { token: \"~\", type: \"cohabiting\" },\n];\n\nconst VALID_SEX = new Set([\"male\", \"female\", \"unknown\", \"amab\", \"afab\", \"uaab\"]);\nconst GENETIC_STATUSES = new Set([\n  \"affected\",\n  \"carrier\",\n  \"carrier-x\",\n  \"obligate-carrier\",\n  \"presymptomatic\",\n  \"unaffected\",\n]);\nconst MARKERS = new Set([\"proband\", \"consultand\", \"evaluated\"]);\nconst VALID_STATUS = new Set([\"deceased\", \"stillborn\", \"pregnancy\", \"sab\", \"tab\", \"ectopic\"]);\n\n// ─── Public API ────────────────────────────────────────────\n\nexport function parsePedigree(text: string): DiagramAST {\n  const rawLines = text.split(\"\\n\");\n  let i = 0;\n\n  while (i < rawLines.length && rawLines[i].trim() === \"\") i++;\n  if (i >= rawLines.length) throw new PedigreeParseError(\"Empty input\", 1);\n\n  const headerLine = rawLines[i].trim();\n  const headerMatch = headerLine.match(/^pedigree\\s*(?:\"([^\"]*)\")?$/i);\n  if (!headerMatch) throw new PedigreeParseError(\"Expected 'pedigree' header\", i + 1);\n\n  const metadata: Record<string, string> = {};\n  if (headerMatch[1]) metadata.title = headerMatch[1];\n  i++;\n\n  const legend: LegendEntry[] = [];\n  const legendOverrides: LegendOverrides = {};\n  let hasLegendOverrides = false;\n  const individualsMap = new Map<string, Individual>();\n  const relationships: Relationship[] = [];\n\n  while (i < rawLines.length) {\n    const raw = rawLines[i];\n    const trimmed = raw.trim();\n\n    if (trimmed === \"\" || trimmed.startsWith(\"#\") || trimmed.startsWith(\"//\")) {\n      i++;\n      continue;\n    }\n\n    // Unified legend directives (legend.title / .position / .label / .hide /\n    // .section / .item / `legend: on|off|<position>`). Legacy `legend: id =\n    // \"...\"` falls through to the regex below — applyMaster() returns false\n    // for the trait-id form, so parseLegendDirective hands it back to us.\n    if (parseLegendDirective(trimmed, legendOverrides)) {\n      hasLegendOverrides = true;\n      i++;\n      continue;\n    }\n\n    // Legend definition (legacy trait-fill DSL).\n    const legendMatch = trimmed.match(\n      /^legend:\\s*([a-zA-Z][a-zA-Z0-9_-]*)\\s*=\\s*\"([^\"]*)\"\\s*(?:\\(\\s*fill:\\s*([a-zA-Z-]+)\\s*\\))?$/\n    );\n    if (legendMatch) {\n      legend.push({\n        id: legendMatch[1],\n        label: legendMatch[2],\n        fill: (legendMatch[3] as ConditionFill) ?? \"full\",\n      });\n      i++;\n      continue;\n    }\n\n    // Couple line\n    const coupleMatch = detectCoupleOp(trimmed);\n    if (coupleMatch) {\n      const { leftId, op, rightRaw } = coupleMatch;\n      const lineNum = i + 1;\n\n      const { id: rightId, propsStr: rightProps } = parseIdWithProps(rightRaw);\n      const leftKey = leftId.toLowerCase();\n      const rightKey = rightId.toLowerCase();\n\n      if (!individualsMap.has(leftKey)) {\n        throw new PedigreeParseError(`Unknown individual '${leftId}'`, lineNum);\n      }\n\n      if (rightProps) {\n        individualsMap.set(rightKey, buildIndividual(rightId, rightProps, lineNum));\n      } else if (!individualsMap.has(rightKey)) {\n        throw new PedigreeParseError(`Unknown individual '${rightId}'`, lineNum);\n      }\n\n      relationships.push({ type: op.type, from: leftKey, to: rightKey });\n\n      const coupleIndent = leadingSpaces(raw);\n      i++;\n\n      // Children (indented under couple)\n      while (i < rawLines.length) {\n        const childLine = rawLines[i];\n        const childTrimmed = childLine.trim();\n\n        if (childTrimmed === \"\" || childTrimmed.startsWith(\"#\")) {\n          i++;\n          continue;\n        }\n\n        if (leadingSpaces(childLine) <= coupleIndent) break;\n\n        const childLineNum = i + 1;\n        const { id: childId, propsStr } = parseIdWithProps(childTrimmed);\n        const childKey = childId.toLowerCase();\n\n        individualsMap.set(childKey, buildIndividual(childId, propsStr, childLineNum));\n\n        const coupleKey = `${leftKey}+${rightKey}`;\n        relationships.push({ type: \"parent-child\", from: coupleKey, to: childKey });\n\n        i++;\n      }\n      continue;\n    }\n\n    // Individual definition\n    const { id, propsStr } = parseIdWithProps(trimmed);\n    const key = id.toLowerCase();\n    const ind = buildIndividual(id, propsStr, i + 1);\n    const existing = individualsMap.get(key);\n    if (existing) {\n      individualsMap.set(key, mergeIndividual(existing, ind));\n    } else {\n      individualsMap.set(key, ind);\n    }\n    i++;\n  }\n\n  return {\n    type: \"pedigree\",\n    individuals: Array.from(individualsMap.values()),\n    relationships,\n    metadata: Object.keys(metadata).length > 0 ? metadata : undefined,\n    legend: legend.length > 0 ? legend : undefined,\n    legendOverrides: hasLegendOverrides ? legendOverrides : undefined,\n  };\n}\n\n// ─── Helpers ────────────────────────────────────────────────\n\nfunction leadingSpaces(line: string): number {\n  const m = line.match(/^(\\s*)/);\n  return m ? m[1].length : 0;\n}\n\nfunction detectCoupleOp(trimmed: string): { leftId: string; op: typeof COUPLE_OPS[0]; rightRaw: string } | null {\n  for (const op of COUPLE_OPS) {\n    let bracketDepth = 0;\n    for (let j = 0; j < trimmed.length; j++) {\n      if (trimmed[j] === \"[\") bracketDepth++;\n      if (trimmed[j] === \"]\") bracketDepth--;\n      if (bracketDepth > 0) continue;\n\n      if (trimmed.substring(j, j + op.token.length) === op.token) {\n        const left = trimmed.substring(0, j).trim();\n        const right = trimmed.substring(j + op.token.length).trim();\n        if (left && right && /^[a-zA-Z][a-zA-Z0-9_-]*$/.test(left)) {\n          return { leftId: left, op, rightRaw: right };\n        }\n      }\n    }\n  }\n  return null;\n}\n\nfunction parseIdWithProps(raw: string): { id: string; propsStr: string | null } {\n  const bracketIdx = raw.indexOf(\"[\");\n  if (bracketIdx === -1) return { id: raw.trim(), propsStr: null };\n  const id = raw.substring(0, bracketIdx).trim();\n  const endBracket = raw.lastIndexOf(\"]\");\n  const propsStr = raw.substring(bracketIdx + 1, endBracket === -1 ? raw.length : endBracket);\n  return { id, propsStr };\n}\n\nfunction splitProps(propsStr: string): string[] {\n  const result: string[] = [];\n  let current = \"\";\n  let parenDepth = 0;\n  for (const ch of propsStr) {\n    if (ch === \"(\") parenDepth++;\n    if (ch === \")\") parenDepth--;\n    if (ch === \",\" && parenDepth === 0) {\n      result.push(current);\n      current = \"\";\n    } else {\n      current += ch;\n    }\n  }\n  if (current.trim()) result.push(current);\n  return result;\n}\n\nfunction buildIndividual(id: string, propsStr: string | null, _lineNum: number): Individual {\n  const ind: Individual = {\n    id: id.toLowerCase(),\n    label: id,\n    sex: \"unknown\",\n    status: \"alive\",\n  };\n\n  if (!propsStr) return ind;\n\n  const tokens = splitProps(propsStr);\n  for (const rawToken of tokens) {\n    const token = rawToken.trim();\n    const lower = token.toLowerCase();\n\n    if (VALID_SEX.has(lower)) {\n      ind.sex = lower === \"amab\" ? \"male\" : lower === \"afab\" ? \"female\" : lower === \"uaab\" ? \"unknown\" : lower as Individual[\"sex\"];\n    } else if (VALID_STATUS.has(lower)) {\n      ind.status = lower as Individual[\"status\"];\n    } else if (GENETIC_STATUSES.has(lower)) {\n      ind.geneticStatus = lower as GeneticStatus;\n    } else if (MARKERS.has(lower)) {\n      if (!ind.markers) ind.markers = [];\n      ind.markers.push(lower as IndividualMarker);\n    } else if (/^\\d{4}$/.test(lower)) {\n      ind.birthYear = parseInt(token, 10);\n    } else if (lower.startsWith(\"affected:\")) {\n      ind.geneticStatus = \"affected\";\n      const traits = token.substring(\"affected:\".length).trim().split(\"+\").map(t => t.trim());\n      ind.conditions = traits.map(t => ({ label: t, fill: \"full\" as ConditionFill }));\n    } else if (token.includes(\":\")) {\n      const colonIdx = token.indexOf(\":\");\n      const key = token.substring(0, colonIdx).trim().toLowerCase();\n      const value = token.substring(colonIdx + 1).trim().replace(/^\"|\"$/g, \"\");\n      if (key === \"label\") {\n        ind.label = value;\n      } else {\n        if (!ind.properties) ind.properties = {};\n        ind.properties[key] = value;\n      }\n    }\n  }\n\n  return ind;\n}\n\nfunction mergeIndividual(existing: Individual, incoming: Individual): Individual {\n  return {\n    ...existing,\n    sex: incoming.sex !== \"unknown\" ? incoming.sex : existing.sex,\n    status: incoming.status !== \"alive\" ? incoming.status : existing.status,\n    birthYear: incoming.birthYear ?? existing.birthYear,\n    geneticStatus: incoming.geneticStatus ?? existing.geneticStatus,\n    markers: incoming.markers ?? existing.markers,\n    conditions: incoming.conditions ?? existing.conditions,\n    properties: { ...existing.properties, ...incoming.properties },\n  };\n}\n","import type {\n  DiagramAST,\n  Individual,\n  Relationship,\n  RelationshipType,\n  LayoutConfig,\n  LayoutResult,\n  LayoutNode,\n  LayoutEdge,\n} from \"../../core/types\";\n\n// ─── Internal types ─────────────────────────────────────────\n\ninterface FamilyUnit {\n  id: string;\n  partners: [string, string];\n  relationship: RelationshipType;\n  children: string[];\n}\n\ninterface LayoutGraph {\n  individuals: Map<string, Individual>;\n  familyUnits: FamilyUnit[];\n  generations: Map<string, number>;\n  childOf: Map<string, string>;\n}\n\n// ─── Constants ─────────────────────────────────────────────\n\nconst LABEL_HEIGHT = 20;\nconst LABEL_GAP = 6;\nconst GEN_LABEL_MARGIN = 50;\n\n// ─── Public API ─────────────────────────────────────────────\n\nexport function layoutPedigree(\n  ast: DiagramAST,\n  config: LayoutConfig\n): LayoutResult {\n  const graph = buildGraph(ast);\n  assignGenerations(graph);\n  const ordered = orderNodesInGenerations(graph);\n  const positions = assignPositions(ordered, graph, config);\n  const edges = computeEdges(graph, positions, config);\n  return packageResult(positions, edges, graph, config);\n}\n\n// ─── Step 1: Build graph ────────────────────────────────────\n\nfunction buildGraph(ast: DiagramAST): LayoutGraph {\n  const individuals = new Map<string, Individual>();\n  for (const ind of ast.individuals) individuals.set(ind.id, ind);\n\n  const familyUnits: FamilyUnit[] = [];\n  const childOf = new Map<string, string>();\n\n  const coupleRels = ast.relationships.filter(\n    (r) => r.type === \"married\" || r.type === \"separated\" ||\n           r.type === \"consanguineous\" || r.type === \"cohabiting\"\n  );\n\n  for (const rel of coupleRels) {\n    const fuId = `${rel.from}+${rel.to}`;\n    const indA = individuals.get(rel.from);\n    const indB = individuals.get(rel.to);\n\n    let partners: [string, string];\n    if (indA && indB) {\n      if (indA.sex === \"male\" && indB.sex === \"female\") {\n        partners = [rel.from, rel.to];\n      } else if (indA.sex === \"female\" && indB.sex === \"male\") {\n        partners = [rel.to, rel.from];\n      } else {\n        partners = [rel.from, rel.to];\n      }\n    } else {\n      partners = [rel.from, rel.to];\n    }\n\n    const children: string[] = [];\n    for (const r of ast.relationships) {\n      if (r.type === \"parent-child\" && r.from === fuId) {\n        children.push(r.to);\n        childOf.set(r.to, fuId);\n      }\n    }\n\n    children.sort((a, b) => {\n      const ia = individuals.get(a);\n      const ib = individuals.get(b);\n      return (ia?.birthYear ?? 9999) - (ib?.birthYear ?? 9999);\n    });\n\n    familyUnits.push({ id: fuId, partners, relationship: rel.type, children });\n  }\n\n  return { individuals, familyUnits, generations: new Map(), childOf };\n}\n\n// ─── Step 2: Assign generations ─────────────────────────────\n\nfunction assignGenerations(graph: LayoutGraph): void {\n  const { individuals, familyUnits, childOf, generations } = graph;\n  const allIds = Array.from(individuals.keys());\n  const roots = allIds.filter((id) => !childOf.has(id));\n\n  if (roots.length === 0 && allIds.length > 0) {\n    for (const id of allIds) generations.set(id, 0);\n    return;\n  }\n\n  for (const root of roots) {\n    if (!generations.has(root)) generations.set(root, 0);\n  }\n\n  let changed = true;\n  while (changed) {\n    changed = false;\n    for (const fu of familyUnits) {\n      const gen0 = generations.get(fu.partners[0]);\n      const gen1 = generations.get(fu.partners[1]);\n\n      let partnerGen: number;\n      if (gen0 !== undefined && gen1 !== undefined) {\n        partnerGen = Math.max(gen0, gen1);\n        if (gen0 !== partnerGen) { generations.set(fu.partners[0], partnerGen); changed = true; }\n        if (gen1 !== partnerGen) { generations.set(fu.partners[1], partnerGen); changed = true; }\n      } else if (gen0 !== undefined) {\n        partnerGen = gen0;\n        generations.set(fu.partners[1], partnerGen); changed = true;\n      } else if (gen1 !== undefined) {\n        partnerGen = gen1;\n        generations.set(fu.partners[0], partnerGen); changed = true;\n      } else {\n        continue;\n      }\n\n      for (const childId of fu.children) {\n        const childGen = partnerGen + 1;\n        const existing = generations.get(childId);\n        if (existing === undefined || existing < childGen) {\n          generations.set(childId, childGen);\n          changed = true;\n        }\n      }\n    }\n  }\n\n  for (const id of allIds) {\n    if (!generations.has(id)) generations.set(id, 0);\n  }\n}\n\n// ─── Step 3: Order nodes ───────────────────────────────────\n\ninterface OrderedGeneration {\n  index: number;\n  nodeIds: string[];\n}\n\nfunction orderNodesInGenerations(graph: LayoutGraph): OrderedGeneration[] {\n  const genGroups = new Map<number, string[]>();\n  for (const [id, gen] of graph.generations) {\n    const grp = genGroups.get(gen) ?? [];\n    grp.push(id);\n    genGroups.set(gen, grp);\n  }\n\n  const genIndices = Array.from(genGroups.keys()).sort((a, b) => a - b);\n  const result: OrderedGeneration[] = [];\n\n  for (const genIdx of genIndices) {\n    const nodeIds = genGroups.get(genIdx) ?? [];\n    result.push({ index: genIdx, nodeIds: orderGeneration(nodeIds, graph) });\n  }\n\n  return result;\n}\n\nfunction orderGeneration(nodeIds: string[], graph: LayoutGraph): string[] {\n  if (nodeIds.length <= 1) return [...nodeIds];\n\n  const nodeSet = new Set(nodeIds);\n  const placed = new Set<string>();\n  const ordered: string[] = [];\n\n  const fuInGen = graph.familyUnits.filter(\n    (fu) => nodeSet.has(fu.partners[0]) || nodeSet.has(fu.partners[1])\n  );\n\n  for (const fu of fuInGen) {\n    for (const p of fu.partners) {\n      if (nodeSet.has(p) && !placed.has(p)) {\n        ordered.push(p);\n        placed.add(p);\n      }\n    }\n  }\n\n  for (const id of nodeIds) {\n    if (!placed.has(id)) {\n      ordered.push(id);\n      placed.add(id);\n    }\n  }\n\n  return ordered;\n}\n\n// ─── Step 4: Assign positions ──────────────────────────────\n\ninterface NodePosition {\n  id: string;\n  x: number;\n  y: number;\n  generation: number;\n}\n\nfunction assignPositions(\n  orderedGens: OrderedGeneration[],\n  graph: LayoutGraph,\n  config: LayoutConfig\n): Map<string, NodePosition> {\n  const positions = new Map<string, NodePosition>();\n  const { nodeWidth, nodeSpacingX } = config;\n  const half = nodeWidth / 2;\n  const coupleGap = nodeWidth + nodeSpacingX * 0.6;\n  const familyGap = nodeWidth + nodeSpacingX * 1.5;\n  const genStepY = config.nodeHeight + LABEL_HEIGHT + LABEL_GAP + config.nodeSpacingY;\n\n  for (const gen of orderedGens) {\n    const y = gen.index * genStepY + half;\n    const segments = buildSegments(gen.nodeIds, graph);\n\n    let xCursor = GEN_LABEL_MARGIN + half;\n    for (let s = 0; s < segments.length; s++) {\n      const seg = segments[s];\n      if (s > 0) xCursor += familyGap;\n\n      if (seg.type === \"couple\") {\n        positions.set(seg.ids[0], { id: seg.ids[0], x: xCursor, y, generation: gen.index });\n        xCursor += coupleGap;\n        positions.set(seg.ids[1], { id: seg.ids[1], x: xCursor, y, generation: gen.index });\n      } else {\n        positions.set(seg.ids[0], { id: seg.ids[0], x: xCursor, y, generation: gen.index });\n      }\n    }\n  }\n\n  resolveOverlaps(positions, orderedGens, config);\n  centerChildrenUnderParents(positions, graph, config);\n  resolveOverlaps(positions, orderedGens, config);\n\n  return positions;\n}\n\ninterface Segment {\n  type: \"couple\" | \"single\";\n  ids: string[];\n}\n\nfunction buildSegments(nodeIds: string[], graph: LayoutGraph): Segment[] {\n  const nodeSet = new Set(nodeIds);\n  const segments: Segment[] = [];\n  const placed = new Set<string>();\n\n  for (const id of nodeIds) {\n    if (placed.has(id)) continue;\n\n    const fu = graph.familyUnits.find(\n      (f) =>\n        (f.partners[0] === id || f.partners[1] === id) &&\n        !placed.has(f.partners[0]) &&\n        !placed.has(f.partners[1]) &&\n        nodeSet.has(f.partners[0]) &&\n        nodeSet.has(f.partners[1])\n    );\n\n    if (fu) {\n      segments.push({ type: \"couple\", ids: [fu.partners[0], fu.partners[1]] });\n      placed.add(fu.partners[0]);\n      placed.add(fu.partners[1]);\n    } else {\n      segments.push({ type: \"single\", ids: [id] });\n      placed.add(id);\n    }\n  }\n\n  return segments;\n}\n\nfunction centerChildrenUnderParents(\n  positions: Map<string, NodePosition>,\n  graph: LayoutGraph,\n  config: LayoutConfig\n): void {\n  const coupleGap = config.nodeSpacingX + config.nodeWidth;\n\n  const personToFUs = new Map<string, FamilyUnit[]>();\n  for (const fu of graph.familyUnits) {\n    for (const p of fu.partners) {\n      const arr = personToFUs.get(p) ?? [];\n      arr.push(fu);\n      personToFUs.set(p, arr);\n    }\n  }\n\n  for (let pass = 0; pass < 3; pass++) {\n    for (const fu of graph.familyUnits) {\n      if (fu.children.length === 0) continue;\n\n      const posA = positions.get(fu.partners[0]);\n      const posB = positions.get(fu.partners[1]);\n      if (!posA || !posB) continue;\n\n      const parentMidX = (posA.x + posB.x) / 2;\n      const childSpacing = config.nodeSpacingX + config.nodeWidth;\n\n      const sortedChildren = [...fu.children].sort((a, b) => {\n        const ia = graph.individuals.get(a);\n        const ib = graph.individuals.get(b);\n        return (ia?.birthYear ?? 9999) - (ib?.birthYear ?? 9999);\n      });\n\n      if (sortedChildren.length > 1) {\n        // Calculate per-gap spacing: add room for married-in spouses\n        const gaps: number[] = [];\n        for (let j = 0; j < sortedChildren.length - 1; j++) {\n          let gap = childSpacing;\n\n          // If the RIGHT child has a spouse placed to their LEFT\n          const nextChild = sortedChildren[j + 1];\n          const nextFUs = personToFUs.get(nextChild) ?? [];\n          for (const cfu of nextFUs) {\n            const pid = cfu.partners[0] === nextChild ? cfu.partners[1] : cfu.partners[0];\n            const cInd = graph.individuals.get(nextChild);\n            const pInd = graph.individuals.get(pid);\n            if (!(cInd?.sex === \"male\" || (cInd?.sex !== \"female\" && pInd?.sex === \"female\"))) {\n              gap += coupleGap;\n            }\n          }\n\n          // If the LEFT child has a spouse placed to their RIGHT\n          const currChild = sortedChildren[j];\n          const currFUs = personToFUs.get(currChild) ?? [];\n          for (const cfu of currFUs) {\n            const pid = cfu.partners[0] === currChild ? cfu.partners[1] : cfu.partners[0];\n            const cInd = graph.individuals.get(currChild);\n            const pInd = graph.individuals.get(pid);\n            if (cInd?.sex === \"male\" || (cInd?.sex !== \"female\" && pInd?.sex === \"female\")) {\n              gap += coupleGap;\n            }\n          }\n\n          gaps.push(gap);\n        }\n\n        const totalWidth = gaps.reduce((s, g) => s + g, 0);\n        const startX = parentMidX - totalWidth / 2;\n        let cx = startX;\n        for (let j = 0; j < sortedChildren.length; j++) {\n          const pos = positions.get(sortedChildren[j]);\n          if (pos) pos.x = cx;\n          if (j < gaps.length) cx += gaps[j];\n        }\n      } else {\n        const pos = positions.get(sortedChildren[0]);\n        if (pos) pos.x = parentMidX;\n      }\n\n      for (const childId of fu.children) {\n        const childPos = positions.get(childId);\n        if (!childPos) continue;\n        const childFUs = personToFUs.get(childId) ?? [];\n        for (const childFU of childFUs) {\n          const partnerId = childFU.partners[0] === childId ? childFU.partners[1] : childFU.partners[0];\n          const partnerPos = positions.get(partnerId);\n          if (!partnerPos) continue;\n          const childInd = graph.individuals.get(childId);\n          const partnerInd = graph.individuals.get(partnerId);\n          if (childInd?.sex === \"male\" || (childInd?.sex !== \"female\" && partnerInd?.sex === \"female\")) {\n            partnerPos.x = childPos.x + coupleGap;\n          } else {\n            partnerPos.x = childPos.x - coupleGap;\n          }\n        }\n      }\n    }\n  }\n}\n\nfunction resolveOverlaps(\n  positions: Map<string, NodePosition>,\n  orderedGens: OrderedGeneration[],\n  config: LayoutConfig\n): void {\n  const minGap = config.nodeWidth + config.nodeSpacingX;\n\n  for (const gen of orderedGens) {\n    const genNodes = gen.nodeIds\n      .map((id) => positions.get(id))\n      .filter((p): p is NodePosition => p !== undefined);\n    genNodes.sort((a, b) => a.x - b.x);\n\n    for (let j = 1; j < genNodes.length; j++) {\n      const gap = genNodes[j].x - genNodes[j - 1].x;\n      if (gap < minGap) {\n        const shift = minGap - gap;\n        for (let k = j; k < genNodes.length; k++) genNodes[k].x += shift;\n      }\n    }\n  }\n\n  let minX = Infinity;\n  for (const pos of positions.values()) {\n    if (pos.x < minX) minX = pos.x;\n  }\n  const minAllowed = GEN_LABEL_MARGIN + config.nodeWidth / 2;\n  if (minX < minAllowed) {\n    const shift = minAllowed - minX;\n    for (const pos of positions.values()) pos.x += shift;\n  }\n}\n\n// ─── Step 5: Compute edges ─────────────────────────────────\n\nfunction computeEdges(\n  graph: LayoutGraph,\n  positions: Map<string, NodePosition>,\n  config: LayoutConfig\n): LayoutEdge[] {\n  const edges: LayoutEdge[] = [];\n  const half = config.nodeWidth / 2;\n  const dropY_offset = config.nodeHeight / 2 + LABEL_HEIGHT + LABEL_GAP + config.nodeSpacingY * 0.35;\n\n  for (const fu of graph.familyUnits) {\n    const posA = positions.get(fu.partners[0]);\n    const posB = positions.get(fu.partners[1]);\n    if (!posA || !posB) continue;\n\n    const leftPos = posA.x < posB.x ? posA : posB;\n    const rightPos = posA.x < posB.x ? posB : posA;\n    const leftId = posA.x < posB.x ? fu.partners[0] : fu.partners[1];\n    const rightId = posA.x < posB.x ? fu.partners[1] : fu.partners[0];\n\n    const coupleRel: Relationship = { type: fu.relationship, from: leftId, to: rightId };\n    const couplePath = `M ${leftPos.x + half} ${leftPos.y} L ${rightPos.x - half} ${rightPos.y}`;\n    edges.push({ from: leftId, to: rightId, relationship: coupleRel, path: couplePath });\n\n    // Consanguinity: add second parallel line\n    if (fu.relationship === \"consanguineous\") {\n      const offset = 3;\n      const consPath = `M ${leftPos.x + half} ${leftPos.y + offset} L ${rightPos.x - half} ${rightPos.y + offset}`;\n      edges.push({\n        from: leftId, to: rightId,\n        relationship: { type: \"consanguineous\", from: leftId, to: rightId, label: \"_double\" },\n        path: consPath,\n      });\n    }\n\n    if (fu.children.length > 0) {\n      const midX = (posA.x + posB.x) / 2;\n      const coupleY = posA.y;\n      const dropY = coupleY + dropY_offset;\n\n      const childPositions = fu.children\n        .map((cid) => ({ id: cid, pos: positions.get(cid) }))\n        .filter((c): c is { id: string; pos: NodePosition } => c.pos !== undefined);\n\n      if (childPositions.length === 0) continue;\n      childPositions.sort((a, b) => a.pos.x - b.pos.x);\n\n      const leftX = childPositions[0].pos.x;\n      const rightX = childPositions[childPositions.length - 1].pos.x;\n\n      edges.push({\n        from: fu.partners[0], to: fu.partners[1],\n        relationship: { type: \"parent-child\", from: fu.id, to: \"_drop\" },\n        path: `M ${midX} ${coupleY} L ${midX} ${dropY}`,\n      });\n\n      if (childPositions.length > 1) {\n        edges.push({\n          from: fu.partners[0], to: fu.partners[1],\n          relationship: { type: \"parent-child\", from: fu.id, to: \"_sibship\" },\n          path: `M ${leftX} ${dropY} L ${rightX} ${dropY}`,\n        });\n      }\n\n      for (const child of childPositions) {\n        const childTop = child.pos.y - config.nodeHeight / 2;\n        const childPath = childPositions.length === 1\n          ? `M ${midX} ${coupleY} L ${midX} ${childTop}`\n          : `M ${child.pos.x} ${dropY} L ${child.pos.x} ${childTop}`;\n\n        edges.push({\n          from: fu.id, to: child.id,\n          relationship: { type: \"parent-child\", from: fu.id, to: child.id },\n          path: childPath,\n        });\n      }\n    }\n  }\n\n  return edges;\n}\n\n// ─── Step 6: Package result ─────────────────────────────────\n\nfunction packageResult(\n  positions: Map<string, NodePosition>,\n  edges: LayoutEdge[],\n  graph: LayoutGraph,\n  config: LayoutConfig\n): LayoutResult {\n  const padding = 40;\n  const nodes: LayoutNode[] = [];\n\n  for (const [id, pos] of positions) {\n    const ind = graph.individuals.get(id);\n    if (!ind) continue;\n    nodes.push({\n      id,\n      x: pos.x - config.nodeWidth / 2 + padding,\n      y: pos.y - config.nodeHeight / 2 + padding,\n      width: config.nodeWidth,\n      height: config.nodeHeight,\n      generation: pos.generation,\n      individual: ind,\n    });\n  }\n\n  const shiftedEdges = edges.map((e) => ({\n    ...e,\n    path: shiftPath(e.path, padding, padding),\n  }));\n\n  let maxX = 0;\n  let maxY = 0;\n  let minX = Infinity;\n  for (const node of nodes) {\n    const cx = node.x + node.width / 2;\n    const labelText = node.individual.label || node.individual.id;\n    const labelHalfWidth = labelText.length * 3.8;\n    const right = Math.max(node.x + node.width, cx + labelHalfWidth);\n    const left = Math.min(node.x, cx - labelHalfWidth);\n    const bottom = node.y + node.height;\n    if (right > maxX) maxX = right;\n    if (bottom > maxY) maxY = bottom;\n    if (left < minX) minX = left;\n  }\n\n  if (minX < 0) {\n    const shift = -minX;\n    for (const node of nodes) {\n      node.x += shift;\n    }\n    for (const edge of shiftedEdges) {\n      edge.path = shiftPath(edge.path, shift, 0);\n    }\n    maxX += shift;\n  }\n\n  return {\n    width: maxX + padding,\n    height: maxY + padding + LABEL_GAP + LABEL_HEIGHT + 10,\n    nodes,\n    edges: shiftedEdges,\n  };\n}\n\nfunction shiftPath(pathData: string, dx: number, dy: number): string {\n  return pathData.replace(\n    /([ML])\\s*([\\d.-]+)\\s+([\\d.-]+)/g,\n    (_match, cmd: string, xStr: string, yStr: string) => {\n      const x = parseFloat(xStr) + dx;\n      const y = parseFloat(yStr) + dy;\n      return `${cmd} ${x} ${y}`;\n    }\n  );\n}\n","/**\n * Auto-derive a LegendSpec from a pedigree AST.\n *\n * Pedigree-specific encodings:\n *   1. Trait fills (the legacy `legend: trait_id = \"Label\" (fill: ...)`\n *      directive) — merged into the unified system as a TRAITS section.\n *   2. Symbols (carriers, deceased, proband, etc.) — only when used.\n *\n * The standard square=Male / circle=Female convention is universal McGoldrick\n * and is excluded by default (matches genogram behavior).\n */\n\nimport type {\n  DiagramAST,\n  GeneticStatus,\n  LegendItem,\n  LegendSection,\n  LegendSpec,\n  Sex,\n} from \"../../core/types\";\nimport type { ResolvedTheme, PersonTokens } from \"../../core/theme\";\n\nconst SECTIONS: LegendSection[] = [\n  { id: \"status\", title: \"Genetic status\" },\n  { id: \"traits\", title: \"Traits\" },\n  { id: \"symbols\", title: \"Symbols\" },\n];\n\nconst OBVIOUS_SEX: ReadonlySet<Sex> = new Set<Sex>([\"male\", \"female\"]);\n\nexport function buildPedigreeLegend(\n  ast: DiagramAST,\n  theme: ResolvedTheme<PersonTokens>\n): LegendSpec {\n  const items: LegendItem[] = [];\n\n  // Genetic status: standard pedigree-chart encoding (unaffected omitted —\n  // it's the universal default).\n  const statusUsed = new Set<GeneticStatus>();\n  for (const ind of ast.individuals) {\n    if (ind.geneticStatus && ind.geneticStatus !== \"unaffected\") {\n      statusUsed.add(ind.geneticStatus);\n    }\n  }\n  const statusOrder: GeneticStatus[] = [\n    \"affected\",\n    \"carrier\",\n    \"carrier-x\",\n    \"obligate-carrier\",\n    \"presymptomatic\",\n  ];\n  for (const s of statusOrder) {\n    if (!statusUsed.has(s)) continue;\n    items.push(geneticStatusItem(s, theme));\n  }\n\n  // Legacy trait legend entries (when DSL uses `legend: cf = \"Cystic Fibrosis\"`).\n  if (ast.legend && ast.legend.length > 0) {\n    for (const entry of ast.legend) {\n      const isFull = !entry.fill || entry.fill === \"full\";\n      items.push({\n        key: entry.id,\n        label: entry.label,\n        kind: isFull ? \"fill\" : \"fill-pattern\",\n        color: entry.color ?? theme.conditionFill,\n        shape: isFull ? undefined : entry.fill,\n        section: \"traits\",\n      });\n    }\n  }\n\n  // Non-obvious sex shapes (unknown / nonbinary / intersex).\n  const sexUsed = new Set<Sex>();\n  for (const ind of ast.individuals) sexUsed.add(ind.sex);\n  const sexOrder: Sex[] = [\"unknown\", \"other\", \"nonbinary\", \"intersex\"];\n  for (const s of sexOrder) {\n    if (!sexUsed.has(s) || OBVIOUS_SEX.has(s)) continue;\n    items.push({\n      key: `sex.${s}`,\n      label: sexLabel(s),\n      kind: \"shape\",\n      shape: \"diamond\",\n      fill: theme.unknownFill,\n      color: theme.stroke,\n      section: \"symbols\",\n    });\n  }\n\n  // Deceased\n  const hasDeceased = ast.individuals.some((i) => i.status === \"deceased\");\n  if (hasDeceased) {\n    items.push({\n      key: \"status.deceased\",\n      label: \"Deceased\",\n      kind: \"marker\",\n      marker: \"slash\",\n      color: theme.deceasedMark,\n      section: \"symbols\",\n    });\n  }\n\n  // Proband / consultand markers\n  const hasProband = ast.individuals.some((i) => i.markers?.includes(\"proband\"));\n  if (hasProband) {\n    items.push({\n      key: \"marker.proband\",\n      label: \"Proband (P) — first affected case identified\",\n      kind: \"marker\",\n      marker: \"P\",\n      section: \"symbols\",\n    });\n  }\n  const hasConsultand = ast.individuals.some((i) => i.markers?.includes(\"consultand\"));\n  if (hasConsultand) {\n    items.push({\n      key: \"marker.consultand\",\n      label: \"Consultand (C)\",\n      kind: \"marker\",\n      marker: \"C\",\n      section: \"symbols\",\n    });\n  }\n\n  return {\n    mode: \"auto\",\n    title: \"Legend\",\n    position: \"bottom-inline\",\n    columns: 1,\n    sections: SECTIONS,\n    items,\n  };\n}\n\nfunction geneticStatusItem(\n  s: GeneticStatus,\n  theme: ResolvedTheme<PersonTokens>\n): LegendItem {\n  switch (s) {\n    case \"affected\":\n      return {\n        key: `status.${s}`,\n        label: \"Affected\",\n        kind: \"fill\",\n        color: theme.conditionFill,\n        section: \"status\",\n      };\n    case \"carrier\":\n      return {\n        key: `status.${s}`,\n        label: \"Carrier\",\n        kind: \"fill-pattern\",\n        color: theme.conditionFill,\n        shape: \"half-left\",\n        section: \"status\",\n      };\n    case \"carrier-x\":\n      return {\n        key: `status.${s}`,\n        label: \"X-linked carrier\",\n        kind: \"marker\",\n        marker: \"dot\",\n        color: theme.conditionFill,\n        section: \"status\",\n      };\n    case \"obligate-carrier\":\n      return {\n        key: `status.${s}`,\n        label: \"Obligate carrier\",\n        kind: \"marker\",\n        marker: \"dot\",\n        color: theme.conditionFill,\n        section: \"status\",\n      };\n    case \"presymptomatic\":\n      return {\n        key: `status.${s}`,\n        label: \"Presymptomatic\",\n        kind: \"line\",\n        color: theme.conditionFill,\n        pattern: \"solid\",\n        strokeWidth: 2,\n        section: \"status\",\n      };\n    default:\n      return {\n        key: `status.${s}`,\n        label: humanize(s),\n        kind: \"fill\",\n        color: theme.conditionFill,\n        section: \"status\",\n      };\n  }\n}\n\nfunction sexLabel(s: Sex): string {\n  switch (s) {\n    case \"unknown\": return \"Unknown sex\";\n    case \"other\": return \"Other\";\n    case \"nonbinary\": return \"Non-binary\";\n    case \"intersex\": return \"Intersex\";\n    default: return s;\n  }\n}\n\nfunction humanize(s: string): string {\n  return s.replace(/[-_]+/g, \" \").replace(/\\b\\w/g, (c) => c.toUpperCase());\n}\n","import type {\n  LayoutResult,\n  LayoutNode,\n  LayoutEdge,\n  RenderConfig,\n  Individual,\n  DiagramAST,\n} from \"../../core/types\";\nimport {\n  svgRoot,\n  el,\n  group,\n  rect,\n  circle,\n  polygon,\n  line,\n  text,\n  title,\n  desc,\n  defs,\n  path,\n} from \"../../core/svg\";\nimport { cssCustomProperties, resolvePersonTheme, STROKE_WIDTH, type ResolvedTheme, type PersonTokens } from \"../../core/theme\";\nimport { applyLegendOverrides, renderLegend as renderLegendCore } from \"../../core/legend\";\nimport { buildPedigreeLegend } from \"./legend\";\n\n// ─── Public API ─────────────────────────────────────────────\n\nexport function renderPedigree(\n  layout: LayoutResult,\n  config: RenderConfig,\n  ast?: DiagramAST\n): string {\n  const t = resolvePersonTheme(config.theme);\n  const defsStr = buildDefs(layout.nodes, t);\n  const styleStr = buildStyles(config, t);\n\n  const genGroups = groupByGeneration(layout.nodes);\n  const edgeLayers = renderEdges(layout.edges);\n  const nodeLayers = renderNodes(genGroups);\n  const labelLayer = renderLabels(layout.nodes, genGroups, config);\n  const genLabels = renderGenerationLabels(genGroups, config);\n\n  const nodeCount = layout.nodes.length;\n  const genCount = genGroups.size;\n\n  const diagramTitle = ast?.metadata?.title ?? \"Pedigree\";\n\n  const layers: string[] = [\n    title(diagramTitle),\n    desc(`Pedigree chart with ${nodeCount} individuals across ${genCount} generations`),\n    defsStr,\n    styleStr,\n  ];\n\n  // Defer chart-content push until legend bbox is known so we can center.\n  const chartContent = [genLabels, edgeLayers, ...nodeLayers, labelLayer];\n\n  let finalWidth = layout.width;\n  let finalHeight = layout.height;\n  let legendSvg = \"\";\n\n  if (ast) {\n    const autoSpec = buildPedigreeLegend(ast, t);\n    const finalSpec = applyLegendOverrides(autoSpec, ast.legendOverrides);\n    if (finalSpec.mode === \"on\" && finalSpec.items.length > 0) {\n      const { svg, bbox: lb } = renderLegendCore(\n        finalSpec,\n        {\n          canvasWidth: layout.width,\n          canvasHeight: layout.height,\n          padding: 16,\n        },\n        t,\n        { fontFamily: config.fontFamily, fontSize: config.fontSize }\n      );\n      if (svg) {\n        legendSvg = svg;\n        const overflowX = lb.x + lb.w + 8;\n        const overflowY = lb.y + lb.h + 8;\n        if (overflowX > finalWidth) finalWidth = overflowX;\n        if (overflowY > finalHeight) finalHeight = overflowY;\n      }\n    }\n  }\n\n  const chartXOffset = Math.max(0, (finalWidth - layout.width) / 2);\n  layers.push(\n    group(\n      { transform: chartXOffset > 0 ? `translate(${chartXOffset}, 0)` : undefined },\n      chartContent\n    )\n  );\n  if (legendSvg) layers.push(legendSvg);\n\n  return svgRoot(\n    {\n      viewBox: `0 0 ${finalWidth} ${finalHeight}`,\n      class: \"schematex-diagram schematex-pedigree\",\n      width: finalWidth,\n      height: finalHeight,\n    },\n    layers\n  );\n}\n\n// ─── Defs ──────────────────────────────────────────────────\n\nfunction buildDefs(nodes: LayoutNode[], t: ResolvedTheme<PersonTokens>): string {\n  const children: string[] = [];\n  const needs = new Set<string>();\n\n  for (const n of nodes) {\n    const gs = n.individual.geneticStatus;\n    if (gs) needs.add(gs);\n  }\n\n  if (needs.has(\"carrier\")) {\n    children.push(\n      el(\"clipPath\", { id: \"schematex-pedigree-clip-carrier-rect\" }, [\n        rect({ x: \"0\", y: \"0\", width: \"50%\", height: \"100%\" }),\n      ]),\n      el(\"clipPath\", { id: \"schematex-pedigree-clip-carrier-circle\" }, [\n        rect({ x: \"-50\", y: \"-50\", width: \"50\", height: \"100\" }),\n      ])\n    );\n  }\n\n  // Proband arrow marker\n  children.push(\n    el(\"marker\", {\n      id: \"schematex-pedigree-proband-arrow\",\n      viewBox: \"0 0 10 10\",\n      refX: \"0\",\n      refY: \"5\",\n      markerWidth: \"8\",\n      markerHeight: \"8\",\n      orient: \"auto-start-reverse\",\n    }, [\n      path({ d: \"M 0 0 L 10 5 L 0 10 z\", fill: t.stroke }),\n    ])\n  );\n\n  return defs(children);\n}\n\n// ─── Styles ────────────────────────────────────────────────\n\nfunction buildStyles(config: RenderConfig, t: ResolvedTheme<PersonTokens>): string {\n  const css = `\n.schematex-pedigree {${cssCustomProperties(t)}\n  background: ${t.bg};\n}\n.schematex-pedigree-shape { fill: ${t.fill}; stroke: ${t.stroke}; stroke-width: ${STROKE_WIDTH.normal}; stroke-linejoin: round; }\n.schematex-pedigree-label { font-family: ${config.fontFamily}; font-size: ${config.fontSize}px; text-anchor: middle; fill: ${t.text}; }\n.schematex-pedigree-gen-label { font-family: ${config.fontFamily}; font-size: 14px; font-weight: bold; fill: ${t.text}; text-anchor: middle; }\n.schematex-pedigree-edge { stroke: ${t.stroke}; stroke-width: ${STROKE_WIDTH.normal}; fill: none; stroke-linecap: round; stroke-linejoin: round; }\n.schematex-pedigree-deceased-mark { stroke: ${t.deceasedMark}; stroke-width: ${STROKE_WIDTH.normal}; stroke-linecap: round; }\n.schematex-pedigree-affected-fill { fill: ${t.conditionFill}; }\n.schematex-pedigree-carrier-fill { fill: ${t.conditionFill}; }\n.schematex-pedigree-carrier-x-dot { fill: ${t.conditionFill}; }\n.schematex-pedigree-presymptomatic-mark { stroke: ${t.conditionFill}; stroke-width: ${STROKE_WIDTH.normal}; }\n.schematex-pedigree-proband-arrow-line { stroke: ${t.stroke}; stroke-width: ${STROKE_WIDTH.normal}; fill: none; marker-end: url(#schematex-pedigree-proband-arrow); }\n.schematex-pedigree-proband-label { font-family: ${config.fontFamily}; font-size: 10px; font-weight: bold; fill: ${t.stroke}; }\n.schematex-pedigree-legend { font-family: ${config.fontFamily}; font-size: 11px; fill: ${t.text}; }\n.schematex-pedigree-legend-box { fill: ${t.fill}; stroke: ${t.neutral}; stroke-width: 1; }\n`;\n  return el(\"style\", {}, css);\n}\n\n// ─── Edges ─────────────────────────────────────────────────\n\nfunction renderEdges(edges: LayoutEdge[]): string {\n  const children: string[] = [];\n\n  for (const edge of edges) {\n    const relType = edge.relationship.type;\n    const cssClass = `schematex-pedigree-edge schematex-pedigree-edge-${relType}`;\n\n    const elements: string[] = [\n      el(\"path\", { d: edge.path, class: \"schematex-pedigree-edge-path\" }),\n    ];\n\n    if (relType === \"separated\") {\n      const mid = pathMidpoint(edge.path);\n      if (mid) {\n        elements.push(\n          line({\n            x1: mid.x - 4, y1: mid.y - 6,\n            x2: mid.x + 4, y2: mid.y + 6,\n            class: \"schematex-pedigree-edge\",\n          })\n        );\n      }\n    }\n\n    children.push(\n      group({ class: cssClass, \"data-from\": edge.from, \"data-to\": edge.to }, elements)\n    );\n  }\n\n  return group({ class: \"schematex-pedigree-edges\" }, children);\n}\n\nfunction pathMidpoint(pathData: string): { x: number; y: number } | null {\n  const coords = pathData.match(/[\\d.-]+/g);\n  if (!coords || coords.length < 4) return null;\n  return {\n    x: (parseFloat(coords[0]) + parseFloat(coords[2])) / 2,\n    y: (parseFloat(coords[1]) + parseFloat(coords[3])) / 2,\n  };\n}\n\n// ─── Nodes ─────────────────────────────────────────────────\n\nfunction groupByGeneration(nodes: LayoutNode[]): Map<number, LayoutNode[]> {\n  const groups = new Map<number, LayoutNode[]>();\n  for (const node of nodes) {\n    const grp = groups.get(node.generation) ?? [];\n    grp.push(node);\n    groups.set(node.generation, grp);\n  }\n  return groups;\n}\n\nfunction renderNodes(genGroups: Map<number, LayoutNode[]>): string[] {\n  const layers: string[] = [];\n  const sortedGens = Array.from(genGroups.keys()).sort((a, b) => a - b);\n\n  for (const genIdx of sortedGens) {\n    const nodes = genGroups.get(genIdx) ?? [];\n    const nodeElements: string[] = [];\n\n    for (const node of nodes) {\n      const cx = node.x + node.width / 2;\n      const cy = node.y + node.height / 2;\n      nodeElements.push(renderPedigreeSymbol(node.individual, cx, cy, node.width));\n    }\n\n    layers.push(\n      group(\n        { class: `schematex-pedigree-generation schematex-pedigree-generation-${genIdx}`, \"data-generation\": genIdx },\n        nodeElements\n      )\n    );\n  }\n\n  return layers;\n}\n\nfunction renderPedigreeSymbol(\n  ind: Individual,\n  x: number,\n  y: number,\n  size: number\n): string {\n  const half = size / 2;\n  const classes = [\"schematex-pedigree-node\", `schematex-pedigree-${ind.sex === \"other\" ? \"unknown\" : ind.sex}`];\n  if (ind.status === \"deceased\") classes.push(\"schematex-pedigree-deceased\");\n  if (ind.geneticStatus) classes.push(`schematex-pedigree-${ind.geneticStatus}`);\n\n  const titleText = formatTitle(ind);\n  const children: string[] = [title(titleText)];\n\n  // Base shape\n  children.push(baseShape(ind.sex, half));\n\n  // Genetic status fills\n  const gs = ind.geneticStatus;\n  if (gs === \"affected\") {\n    children.push(affectedFill(ind.sex, half));\n  } else if (gs === \"carrier\") {\n    children.push(carrierFill(ind.sex, half));\n  } else if (gs === \"carrier-x\" || gs === \"obligate-carrier\") {\n    children.push(carrierDot(half));\n  }\n\n  // Presymptomatic vertical line\n  if (gs === \"presymptomatic\") {\n    children.push(\n      line({ x1: 0, y1: -half, x2: 0, y2: half, class: \"schematex-pedigree-presymptomatic-mark\" })\n    );\n  }\n\n  // Deceased: diagonal slash (pedigree uses / not X)\n  if (ind.status === \"deceased\") {\n    const ext = ind.sex === \"female\" ? half * 0.707 : half;\n    children.push(\n      line({ x1: ext, y1: -ext, x2: -ext, y2: ext, class: \"schematex-pedigree-deceased-mark\" })\n    );\n  }\n\n  // Proband arrow\n  if (ind.markers?.includes(\"proband\")) {\n    const arrowLen = 20;\n    children.push(\n      line({\n        x1: -half - arrowLen, y1: half + arrowLen,\n        x2: -half - 2, y2: half + 2,\n        class: \"schematex-pedigree-proband-arrow-line\",\n      }),\n      text(\n        { x: -half - arrowLen - 4, y: half + arrowLen + 4, class: \"schematex-pedigree-proband-label\", \"text-anchor\": \"end\" },\n        \"P\"\n      )\n    );\n  }\n\n  // Consultand arrow\n  if (ind.markers?.includes(\"consultand\")) {\n    const arrowLen = 20;\n    children.push(\n      line({\n        x1: -half - arrowLen, y1: half + arrowLen,\n        x2: -half - 2, y2: half + 2,\n        class: \"schematex-pedigree-proband-arrow-line\",\n      }),\n      text(\n        { x: -half - arrowLen - 4, y: half + arrowLen + 4, class: \"schematex-pedigree-proband-label\", \"text-anchor\": \"end\" },\n        \"C\"\n      )\n    );\n  }\n\n  // Evaluated marker\n  if (ind.markers?.includes(\"evaluated\")) {\n    children.push(\n      text(\n        { x: 0, y: -half - 4, class: \"schematex-pedigree-proband-label\", \"text-anchor\": \"middle\" },\n        \"E\"\n      )\n    );\n  }\n\n  return group(\n    {\n      class: classes.join(\" \"),\n      \"data-individual-id\": ind.id,\n      transform: `translate(${x}, ${y})`,\n    },\n    children\n  );\n}\n\nfunction baseShape(sex: Individual[\"sex\"], half: number): string {\n  switch (sex) {\n    case \"male\":\n      return rect({ x: -half, y: -half, width: half * 2, height: half * 2, class: \"schematex-pedigree-shape\" });\n    case \"female\":\n      return circle({ cx: 0, cy: 0, r: half, class: \"schematex-pedigree-shape\" });\n    default:\n      return polygon({ points: `0,${-half} ${half},0 0,${half} ${-half},0`, class: \"schematex-pedigree-shape\" });\n  }\n}\n\nfunction affectedFill(sex: Individual[\"sex\"], half: number): string {\n  const attrs = { class: \"schematex-pedigree-affected-fill\" };\n  switch (sex) {\n    case \"male\":\n      return rect({ x: -half, y: -half, width: half * 2, height: half * 2, ...attrs });\n    case \"female\":\n      return circle({ cx: 0, cy: 0, r: half, ...attrs });\n    default:\n      return polygon({ points: `0,${-half} ${half},0 0,${half} ${-half},0`, ...attrs });\n  }\n}\n\nfunction carrierFill(sex: Individual[\"sex\"], half: number): string {\n  const clipSuffix = sex === \"female\" ? \"circle\" : \"rect\";\n  const attrs = {\n    class: \"schematex-pedigree-carrier-fill\",\n    \"clip-path\": `url(#schematex-pedigree-clip-carrier-${clipSuffix})`,\n  };\n  switch (sex) {\n    case \"male\":\n      return rect({ x: -half, y: -half, width: half * 2, height: half * 2, ...attrs });\n    case \"female\":\n      return circle({ cx: 0, cy: 0, r: half, ...attrs });\n    default:\n      return polygon({ points: `0,${-half} ${half},0 0,${half} ${-half},0`, ...attrs });\n  }\n}\n\nfunction carrierDot(half: number): string {\n  return circle({ cx: 0, cy: 0, r: half * 0.15, class: \"schematex-pedigree-carrier-x-dot\" });\n}\n\nfunction formatTitle(ind: Individual): string {\n  const name = ind.label.charAt(0).toUpperCase() + ind.label.slice(1);\n  if (ind.geneticStatus && ind.geneticStatus !== \"unaffected\") {\n    return `${name} (${ind.geneticStatus})`;\n  }\n  return name;\n}\n\n// ─── Labels ────────────────────────────────────────────────\n\nfunction renderLabels(\n  nodes: LayoutNode[],\n  genGroups: Map<number, LayoutNode[]>,\n  config: RenderConfig\n): string {\n  const labels: string[] = [];\n\n  // Build per-generation numbering\n  const genNumbering = new Map<string, string>();\n  const sortedGens = Array.from(genGroups.keys()).sort((a, b) => a - b);\n  for (const genIdx of sortedGens) {\n    const genNodes = genGroups.get(genIdx) ?? [];\n    const sorted = [...genNodes].sort((a, b) => a.x - b.x);\n    const romanNum = toRoman(genIdx + 1);\n    for (let i = 0; i < sorted.length; i++) {\n      genNumbering.set(sorted[i].id, `${romanNum}-${i + 1}`);\n    }\n  }\n\n  for (const node of nodes) {\n    const ind = node.individual;\n    const cx = node.x + node.width / 2;\n    const labelY = node.y + node.height + 6 + config.fontSize;\n\n    const pedigreeId = genNumbering.get(ind.id) ?? ind.id;\n    const displayLabel = ind.label !== ind.id ? ind.label : pedigreeId;\n\n    labels.push(\n      text(\n        { x: cx, y: labelY, class: \"schematex-pedigree-label\", \"data-individual-id\": ind.id },\n        displayLabel\n      )\n    );\n  }\n\n  return group({ class: \"schematex-pedigree-labels\" }, labels);\n}\n\n// ─── Generation Labels ─────────────────────────────────────\n\nfunction renderGenerationLabels(\n  genGroups: Map<number, LayoutNode[]>,\n  _config: RenderConfig\n): string {\n  const labels: string[] = [];\n  const sortedGens = Array.from(genGroups.keys()).sort((a, b) => a - b);\n\n  for (const genIdx of sortedGens) {\n    const nodes = genGroups.get(genIdx) ?? [];\n    if (nodes.length === 0) continue;\n\n    const midY = nodes[0].y + nodes[0].height / 2;\n    const roman = toRoman(genIdx + 1);\n\n    labels.push(\n      text(\n        { x: 25, y: midY + 5, class: \"schematex-pedigree-gen-label\" },\n        roman\n      )\n    );\n  }\n\n  return group({ class: \"schematex-pedigree-generation-labels\" }, labels);\n}\n\n// ─── Legend ────────────────────────────────────────────────\n// (moved to ./legend.ts; rendered via core/legend)\n\n// ─── Helpers ───────────────────────────────────────────────\n\nfunction toRoman(n: number): string {\n  const vals = [1000, 900, 500, 400, 100, 90, 50, 40, 10, 9, 5, 4, 1];\n  const syms = [\"M\", \"CM\", \"D\", \"CD\", \"C\", \"XC\", \"L\", \"XL\", \"X\", \"IX\", \"V\", \"IV\", \"I\"];\n  let result = \"\";\n  for (let i = 0; i < vals.length; i++) {\n    while (n >= vals[i]) {\n      result += syms[i];\n      n -= vals[i];\n    }\n  }\n  return result;\n}\n","import type { DiagramPlugin, RenderConfig } from \"../../core/types\";\nimport { parsePedigree, PedigreeParseError } from \"./parser\";\nimport { layoutPedigree } from \"./layout\";\nimport { renderPedigree } from \"./renderer\";\n\nexport const pedigree: DiagramPlugin = {\n  type: \"pedigree\",\n\n  detect(text: string): boolean {\n    const firstLine = text.trim().split(\"\\n\")[0]?.trim().toLowerCase() ?? \"\";\n    return firstLine === \"pedigree\" || firstLine.startsWith(\"pedigree \");\n  },\n\n  parse: parsePedigree,\n\n  render(text: string, config?: RenderConfig): string {\n    const ast = parsePedigree(text);\n    const layoutConfig = {\n      nodeSpacingX: 80,\n      nodeSpacingY: 100,\n      nodeWidth: 40,\n      nodeHeight: 40,\n    };\n    const layout = layoutPedigree(ast, layoutConfig);\n    const renderConfig: RenderConfig = {\n      fontFamily: config?.fontFamily ?? \"system-ui, -apple-system, sans-serif\",\n      fontSize: config?.fontSize ?? 12,\n      theme: config?.theme ?? \"default\",\n      padding: config?.padding ?? 20,\n    };\n    return renderPedigree(layout, renderConfig, ast);\n  },\n};\n\nexport { parsePedigree, PedigreeParseError, layoutPedigree, renderPedigree };\n"]}