rxome-generator 1.0.4-beta.4 → 1.0.4-beta.7

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Files changed (6) hide show
  1. package/demos/encoding_test.json +58 -0
  2. package/lib/rxome-api.js +3 -3
  3. package/lib/rxome-api.test.js +1 -1
  4. package/lib/rxome-generator.js +1 -1
  5. package/package.json +2 -3
  6. package/ratest.json +58 -0
package/demos/encoding_test.json ADDED
@@ -0,0 +1,58 @@
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+ {
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+ "id": "UEN167DJ04KK",
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+ "subject": {
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+ "dateOfBirth": "2026-02-18",
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+ "sex": 0
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+ },
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+ "comment": "",
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+ "compressedFeatures": {
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+ "includes": [
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+ "HP:0000111"
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+ ],
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+ "excludes": []
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+ },
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+ "interpretations": [
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+ {
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+ "id": "first",
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+ "progressStatus": 3,
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+ "diagnosis": {
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+ "disease": {
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+ "id": "OMIM:"
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+ },
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+ "genomicInterpretations": [
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+ {
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+ "subjectOrBiosampleId": "xfx2ybyipvr.y3n0hogaybn",
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+ "variantInterpretation": {
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+ "acmgPathogenicityClassification": "999",
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+ "variationDescriptor": {
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+ "geneContext": {
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+ "valueId": "",
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+ "symbol": "",
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+ "alternateIds": [
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+ ""
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+ ]
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+ },
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+ "expressions": [],
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+ "extensions": [
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+ {
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+ "name": "test-type",
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+ "value": "Exome sequencing, long read"
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+ }
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+ ],
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+ "allelicState": {
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+ "id": "None"
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+ }
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+ }
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+ }
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+ }
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+ ]
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+ }
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+ }
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+ ],
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+ "metaData": {
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+ "created": "2026-02-18",
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+ "createdBy": "Tom",
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+ "submittedBy": "tom@kamphans.de",
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+ "pseudonym": "UEN167DJ04KK"
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+ }
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+ }
package/lib/rxome-api.js CHANGED
@@ -1,5 +1,5 @@
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  // Using native fetch API instead of axios for better webpack compatibility
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- import * as ED from 'noble-ed25519';
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+ import * as ED from '@noble/ed25519';
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  import Protobuf from 'protobufjs';
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  import { stringify } from 'querystring';
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@@ -67,7 +67,7 @@ readSigKey = async name => {
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  export const generateApiKeys = async () => {
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  const privateKey = ED.utils.randomPrivateKey();
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- const publicKey = await ED.getPublicKey(privateKey);
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+ const publicKey = await ED.getPublicKeyAsync(privateKey);
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  return {
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  privateKey: privateKey,
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  publicKey: publicKey
@@ -102,7 +102,7 @@ export const signData = async( keyId, user, keyB64, created, debug = false ) =>
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  debug && console.log('Base 64 key: ', keyB64);
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  debug && console.log('Binary key: ', key, " Key length: ", key.length);
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- const signature = await ED.sign( messageUi8, key);
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+ const signature = await ED.signAsync( messageUi8, key);
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  const sigB64 = bufferToBase64( signature );
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  const auth=`Signature keyId="${keyId}",algorithm="ed25519",headers="x-date x-rxome-user",signature="${sigB64}",created="${created}"`
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  debug && console.log('Auth string: ', auth);
package/lib/rxome-api.test.js CHANGED
@@ -1,6 +1,6 @@
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  import * as RxAPI from './rxome-api.js';
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  import { readFileSync, existsSync, statSync } from 'fs';
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- import * as ED from 'noble-ed25519';
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+ import * as ED from '@noble/ed25519';
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  describe('API access', () => {
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  test.skip('generates valid API access keys', async () => {
package/lib/rxome-generator.js CHANGED
@@ -155,7 +155,7 @@ export const sanitizeACMG = ( str ) => {
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  if ( str == 'RISK_ALLELE' ) {
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  return 999;
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  }
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- isNaN(+(str.toString()))
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+ return isNaN(+(str.toString()))
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  ? Math.max(0, ENUM_ACMG.indexOf(str.toUpperCase()))
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  : +str
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  }
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "rxome-generator",
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- "version": "1.0.4-beta.4",
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+ "version": "1.0.4-beta.7",
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  "description": "Generates QR codes containing medical information for use with the FindMe2Care platform.",
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  "main": "index.js",
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  "type": "module",
@@ -34,8 +34,7 @@
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  "@noble/ed25519": "^2.2.3",
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  "commander": "^9.4.0",
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  "json-key-converter": "^1.0.0",
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- "noble-ed25519": "^1.2.6",
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- "node-fetch": "^3.3.2",
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+ "node-fetch": "^3.3.2",
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  "openpgp": "^6.1.0",
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  "protobufjs": "^7.4.0",
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  "protobufjs-cli": "^1.1.3",
package/ratest.json ADDED
@@ -0,0 +1,58 @@
1
+ {
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+ "id": "UEN167DJ04KK",
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+ "subject": {
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+ "dateOfBirth": "2026-02-18",
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+ "sex": 0
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+ },
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+ "comment": "",
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+ "compressedFeatures": {
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+ "includes": [
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+ "HP:0000111"
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+ ],
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+ "excludes": []
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+ },
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+ "interpretations": [
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+ {
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+ "id": "first",
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+ "progressStatus": 3,
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+ "diagnosis": {
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+ "disease": {
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+ "id": "OMIM:"
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+ },
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+ "genomicInterpretations": [
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+ {
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+ "subjectOrBiosampleId": "xfx2ybyipvr.y3n0hogaybn",
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+ "variantInterpretation": {
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+ "acmgPathogenicityClassification": "1",
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+ "variationDescriptor": {
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+ "geneContext": {
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+ "valueId": "",
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+ "symbol": "",
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+ "alternateIds": [
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+ ""
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+ ]
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+ },
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+ "expressions": [],
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+ "extensions": [
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+ {
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+ "name": "test-type",
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+ "value": "Exome sequencing, long read"
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+ }
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+ ],
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+ "allelicState": {
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+ "id": "None"
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+ }
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+ }
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+ }
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+ }
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+ ]
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+ }
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+ }
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+ ],
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+ "metaData": {
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+ "created": "2026-02-18",
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+ "createdBy": "Tom",
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+ "submittedBy": "tom@kamphans.de",
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+ "pseudonym": "UEN167DJ04KK"
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+ }
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+ }