rust-kgdb 0.6.71 → 0.6.73

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Files changed (5) hide show
  1. package/CHANGELOG.md +32 -0
  2. package/DESIGN.md +34 -34
  3. package/IMPLEMENTATION_GUIDE.md +35 -35
  4. package/README.md +92 -4
  5. package/package.json +1 -1
package/CHANGELOG.md CHANGED
@@ -2,6 +2,38 @@
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  All notable changes to the rust-kgdb TypeScript SDK will be documented in this file.
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+ ## [0.6.72] - 2025-12-17
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+
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+ ### Comprehensive Documentation Overhaul
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+
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+ #### Added Human-Style SME Introduction
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+ - **"The Problem With AI Today"** - Real-world hallucination examples (Provider #4521, fake court cases, Nexapril)
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+ - **"The Engineering Problem"** - Root cause analysis: LLMs predict text, not facts
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+ - **"The Solution: Query Generation, Not Answer Generation"** - Key architectural insight
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+ - **"The Business Value"** - Metrics for Enterprises, Engineering Teams, AI/ML Teams
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+
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+ #### Added Three-Box Architecture Diagram
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+ - Traditional AI Architecture (Dangerous) - Shows LLM generating fabricated answers
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+ - rust-kgdb + HyperMind Architecture (Safe) - Shows query generation with verification
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+ - Four-Layer Trust Model - Agent -> Proxy -> Sandbox -> Database
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+
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+ #### Added Honest Competitor Comparison
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+ - **RDFox**: Oxford Semantic Technologies (35x slower on lookups, but more mature OWL)
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+ - **Tentris**: DICE Research tensor-based WCOJ (similar performance, different approach)
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+ - **AllegroGraph**: Franz Inc (25+ years track record, enterprise integrations)
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+ - **Apache Jena**: Apache Foundation (largest ecosystem, best community)
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+
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+ #### Added WCOJ Research Section
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+ - Comparison table: rust-kgdb vs RDFox vs Tentris vs Jena
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+ - Research paper links (Veldhuizen 2014, DICE 2025, AGM Bound)
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+ - Triangle query complexity example (10^18 vs 10^9)
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+
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+ #### Fixed npm README Display
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+ - Converted Unicode box-drawing characters to ASCII
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+ - README now displays correctly on npmjs.com
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+
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+ ---
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+
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  ## [0.6.55] - 2025-12-17
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  ### Thought-Provoking Documentation Rewrite
package/DESIGN.md CHANGED
@@ -5,28 +5,28 @@
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  HyperMind is a neuro-symbolic AI framework that combines LLM planning with deterministic database execution. Unlike traditional AI agents that rely entirely on LLM outputs, HyperMind uses the LLM as a **planner** while executing queries against real data.
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  ```
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- ┌─────────────────────────────────────────────────────────────────────────────┐
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- │ HYPERMIND ARCHITECTURE │
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- ├─────────────────────────────────────────────────────────────────────────────┤
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- │ │
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- │ ┌─────────────┐ ┌─────────────┐ ┌─────────────┐ ┌─────────────┐ │
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- │ │ User │ │ Schema │ │ LLM │ │ Typed │ │
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- │ │ Query │ -> │ Context │ -> │ Planner │ -> │ Tools │ │
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- │ └─────────────┘ └─────────────┘ └─────────────┘ └─────────────┘ │
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- │ │ │ │
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- │ │ ▼ │
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- │ │ ┌─────────────┐ │
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- │ │ │ Database │ │
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- │ │ │ Execution │ │
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- │ │ └─────────────┘ │
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- │ │ │ │
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- │ ▼ ▼ │
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- │ ┌─────────────────────────────────────────────────┐ │
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- │ │ Reasoning Trace │ │
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- │ │ (Every step recorded with cryptographic hash) │ │
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- │ └─────────────────────────────────────────────────┘ │
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- │ │
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- └─────────────────────────────────────────────────────────────────────────────┘
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+ +-----------------------------------------------------------------------------+
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+ | HYPERMIND ARCHITECTURE |
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+ +-----------------------------------------------------------------------------+
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+ | |
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+ | +-------------+ +-------------+ +-------------+ +-------------+ |
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+ | | User | | Schema | | LLM | | Typed | |
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+ | | Query | -> | Context | -> | Planner | -> | Tools | |
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+ | +-------------+ +-------------+ +-------------+ +-------------+ |
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+ | | | |
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+ | | v |
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+ | | +-------------+ |
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+ | | | Database | |
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+ | | | Execution | |
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+ | | +-------------+ |
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+ | | | |
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+ | v v |
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+ | +-------------------------------------------------+ |
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+ | | Reasoning Trace | |
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+ | | (Every step recorded with cryptographic hash) | |
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+ | +-------------------------------------------------+ |
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+ | |
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+ +-----------------------------------------------------------------------------+
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  ```
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  ---
@@ -62,7 +62,7 @@ When LLM generates incorrect predicates, the resolver fixes them:
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  ```
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  LLM Output: SELECT ?x WHERE { ?x teacher ?y }
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- ↑
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+ ^
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  Wrong predicate!
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  Resolver Process:
@@ -73,14 +73,14 @@ Resolver Process:
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  - Jaro-Winkler("teacher", "teacherOf") = 0.89
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  - N-gram overlap = 0.75
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  - Porter stem match = true
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- 5. Resolve: "teacher" → "teacherOf"
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+ 5. Resolve: "teacher" -> "teacherOf"
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  Fixed Output: SELECT ?x WHERE { ?x teacherOf ?y }
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- ↑
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+ ^
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  Correct predicate!
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  ```
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- **Benchmark result:** This adds +14.3 percentage points accuracy (71.4% → 85.7%)
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+ **Benchmark result:** This adds +14.3 percentage points accuracy (71.4% -> 85.7%)
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  ### 3. Typed Tool Registry
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@@ -139,12 +139,12 @@ Every answer includes a complete derivation:
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  Schema represented as a category:
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  - **Objects** = Classes (Professor, Course, Student)
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  - **Morphisms** = Properties (teacherOf, enrolledIn)
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- - **Composition** = Property paths (Professor → Course → Department)
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+ - **Composition** = Property paths (Professor -> Course -> Department)
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  ```
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- Professor ──teacherOf──▶ Course ──offeredBy──▶ Department
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- │ │
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- └────────────worksFor──────────────────────────┘
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+ Professor --teacherOf--> Course --offeredBy--> Department
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+ | |
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+ +------------worksFor--------------------------+
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  ```
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  ### Metric Space Similarity
@@ -171,7 +171,7 @@ Proofs are programs, types are propositions:
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  ```
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  Query : SPARQLQuery (type = proposition)
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  Result : BindingSet (type = proposition)
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- Execution : Query → Result (proof = program)
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+ Execution : Query -> Result (proof = program)
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  The reasoning trace IS the proof that the answer is correct.
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  ```
@@ -221,7 +221,7 @@ TEST_QUERIES = [
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  ### LangChain
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  ```
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- Architecture: Prompt Template → LLM → Text Output
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+ Architecture: Prompt Template -> LLM -> Text Output
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  Execution: None (LLM output is final answer)
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  Validation: None
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  Audit Trail: None
@@ -230,7 +230,7 @@ Audit Trail: None
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  ### DSPy
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  ```
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- Architecture: Signature → LLM → Structured Output
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+ Architecture: Signature -> LLM -> Structured Output
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  Execution: None (LLM output is final answer)
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  Validation: Output structure only
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  Audit Trail: None
@@ -239,7 +239,7 @@ Audit Trail: None
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  ### HyperMind
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  ```
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- Architecture: Schema → LLM Planner → Typed Tools → Database → Verified Answer
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+ Architecture: Schema -> LLM Planner -> Typed Tools -> Database -> Verified Answer
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  Execution: Real SPARQL/Datalog on actual data
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  Validation: Schema + Type + Predicate resolution
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  Audit Trail: Full reasoning trace with hash
package/IMPLEMENTATION_GUIDE.md CHANGED
@@ -18,34 +18,34 @@
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  The TypeScript SDK uses **NAPI-RS** for native Rust bindings with zero-copy performance. Version 0.6.17 includes the complete HyperMind AI framework for building agents that give verifiable answers.
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  ```
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- ┌─────────────────────────────────────────────────────────────────────────────┐
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- │ ARCHITECTURE OVERVIEW │
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- │ │
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- │ YOUR APPLICATION (Node.js / TypeScript) │
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- │ │ │
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- │ ▼ │
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- │ ┌───────────────────────────────────────────────────────────────────────┐ │
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- │ │ index.js - Entry Point │ │
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- │ │ • Platform detection (darwin/linux/win32 × x64/arm64) │ │
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- │ │ • Native binding loader │ │
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- │ │ • HyperMind framework exports │ │
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- │ └───────────────────────────────────────────────────────────────────────┘ │
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- │ │ │ │
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- │ ▼ ▼ │
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- │ ┌─────────────────────┐ ┌─────────────────────────────────────────┐ │
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- │ │ Native NAPI-RS │ │ hypermind-agent.js │ │
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- │ │ (Rust → Node.js) │ │ (Pure JavaScript Framework) │ │
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- │ │ │ │ │ │
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- │ │ • GraphDb │ │ • HyperMindAgent │ │
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- │ │ • GraphFrame │ │ • LLMPlanner │ │
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- │ │ • EmbeddingService │ │ • SchemaAwareGraphDB │ │
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- │ │ • DatalogProgram │ │ • SchemaContext │ │
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- │ │ • pregelShortestPaths│ │ • MemoryManager │ │
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- │ │ │ │ • WasmSandbox │ │
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- │ │ ~47MB native addon │ │ • ProofDAG │ │
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- │ └─────────────────────┘ └─────────────────────────────────────────┘ │
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- │ │
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- └─────────────────────────────────────────────────────────────────────────────┘
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+ +-----------------------------------------------------------------------------+
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+ | ARCHITECTURE OVERVIEW |
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+ | |
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+ | YOUR APPLICATION (Node.js / TypeScript) |
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+ | | |
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+ | v |
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+ | +-----------------------------------------------------------------------+ |
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+ | | index.js - Entry Point | |
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+ | | * Platform detection (darwin/linux/win32 × x64/arm64) | |
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+ | | * Native binding loader | |
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+ | | * HyperMind framework exports | |
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+ | +-----------------------------------------------------------------------+ |
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+ | | | |
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+ | v v |
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+ | +---------------------+ +-----------------------------------------+ |
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+ | | Native NAPI-RS | | hypermind-agent.js | |
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+ | | (Rust -> Node.js) | | (Pure JavaScript Framework) | |
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+ | | | | | |
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+ | | * GraphDb | | * HyperMindAgent | |
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+ | | * GraphFrame | | * LLMPlanner | |
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+ | | * EmbeddingService | | * SchemaAwareGraphDB | |
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+ | | * DatalogProgram | | * SchemaContext | |
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+ | | * pregelShortestPaths| | * MemoryManager | |
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+ | | | | * WasmSandbox | |
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+ | | ~47MB native addon | | * ProofDAG | |
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+ | +---------------------+ +-----------------------------------------+ |
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+ | |
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+ +-----------------------------------------------------------------------------+
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  ```
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  ## Core Components
@@ -184,7 +184,7 @@ The SDK automatically extracts your data structure:
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  class SchemaContext {
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  constructor() {
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  this.classes = new Set() // Objects in category
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- this.properties = new Map() // Morphisms: predicate → {domain, range}
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+ this.properties = new Map() // Morphisms: predicate -> {domain, range}
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  }
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  // Functor: Transform between schemas
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  ```
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  tests/
345
- ├── regression.test.ts # Core GraphDB tests (28 tests)
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- ├── graphframes.test.ts # GraphFrame tests
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- ├── embeddings.test.ts # EmbeddingService tests
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- ├── datalog.test.ts # Datalog tests
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- ├── pregel.test.ts # Pregel tests
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- └── hypermind-agent.test.ts # HyperMind framework tests (59 tests)
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+ +-- regression.test.ts # Core GraphDB tests (28 tests)
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+ +-- graphframes.test.ts # GraphFrame tests
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+ +-- embeddings.test.ts # EmbeddingService tests
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+ +-- datalog.test.ts # Datalog tests
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+ +-- pregel.test.ts # Pregel tests
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+ +-- hypermind-agent.test.ts # HyperMind framework tests (59 tests)
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  ```
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  ## Build Commands
package/README.md CHANGED
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  ---
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+ ## Documentation Guide (Reading Order)
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+
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+ For engineers new to rust-kgdb, read in this order:
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+
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+ | Order | Document | Purpose | Time |
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+ |-------|----------|---------|------|
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+ | 1 | **README.md** (this file) | Why rust-kgdb exists, what problem it solves, architecture overview | 15 min |
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+ | 2 | **[Quick Start](#quick-start)** | Get running with 5 lines of code | 5 min |
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+ | 3 | **[DESIGN.md](./DESIGN.md)** | HyperMind architecture: Schema Context, Predicate Resolver, Typed Tools | 20 min |
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+ | 4 | **[IMPLEMENTATION_GUIDE.md](./IMPLEMENTATION_GUIDE.md)** | Step-by-step implementation: SPARQL, Datalog, Motif, GraphFrames | 30 min |
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+ | 5 | **[examples/](./examples/)** | Working code: fraud detection, underwriting, graph analytics | 30 min |
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+ | 6 | **[HYPERMIND_BENCHMARK_REPORT.md](./HYPERMIND_BENCHMARK_REPORT.md)** | Detailed benchmark methodology and results | 15 min |
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+ | 7 | **[CHANGELOG.md](./CHANGELOG.md)** | Version history and feature additions | 5 min |
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+
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+ **Quick Links:**
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+ - [Installation](#installation) - `npm install rust-kgdb`
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+ - [SPARQL Examples](#hypermind-where-neural-meets-symbolic)
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+ - [Datalog Examples](#hypermind-where-neural-meets-symbolic)
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+ - [GraphFrame Examples](#feature-overview)
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+ - [Fraud Detection](#production-example-fraud-detection)
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+ - [Benchmarks](#published-benchmarks)
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+
33
+ ---
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+
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  ## The Problem With AI Today
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  Enterprise AI projects keep failing. Not because the technology is bad, but because organizations use it wrong.
@@ -529,6 +553,8 @@ We don't make claims we can't prove. All measurements use **publicly available,
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  **Comparison Baselines:**
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  - **[RDFox](https://www.oxfordsemantic.tech/product)** - Oxford Semantic Technologies' commercial RDF database (industry gold standard)
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  - **[Apache Jena](https://jena.apache.org/documentation/tdb/)** - Apache Foundation's open-source RDF framework
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+ - **[Tentris](https://tentris.dice-research.org/)** - Tensor-based RDF store from DICE Research (University of Paderborn)
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+ - **[AllegroGraph](https://allegrograph.com/)** - Franz Inc's commercial graph database with AI features
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  | Metric | Value | Why It Matters | Source |
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  |--------|-------|----------------|--------|
@@ -538,6 +564,36 @@ We don't make claims we can't prove. All measurements use **publicly available,
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  | **SPARQL Accuracy** | 86.4% | vs 0% vanilla LLM (LUBM benchmark) | [HyperMind benchmark](./vanilla-vs-hypermind-benchmark.js) |
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  | **W3C Compliance** | 100% | Full SPARQL 1.1 + RDF 1.2 | [W3C test suite](https://www.w3.org/2009/sparql/docs/tests/) |
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+ ### Honest Feature Comparison
568
+
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+ | Feature | rust-kgdb | RDFox | Tentris | AllegroGraph | Jena |
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+ |---------|-----------|-------|---------|--------------|------|
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+ | **Lookup Latency** | 2.78 µs | ~100 µs | ~10 µs | ~50 µs | ~200 µs |
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+ | **Memory/Triple** | 24 bytes | 32 bytes | 40 bytes | 64 bytes | 50-60 bytes |
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+ | **SPARQL 1.1** | 100% | 100% | ~95% | 100% | 100% |
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+ | **OWL Reasoning** | OWL 2 RL | OWL 2 RL/EL | No | RDFS++ | OWL 2 |
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+ | **Datalog** | Yes (semi-naive) | Yes | No | Yes | No |
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+ | **Vector Embeddings** | HNSW native | No | No | Vector store | No |
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+ | **Graph Algorithms** | PageRank, CC, etc. | No | No | Yes | No |
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+ | **Distributed** | HDRF + Raft | Yes | No | Yes | No |
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+ | **Mobile Native** | iOS/Android FFI | No | No | No | No |
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+ | **AI Agent Framework** | HyperMind | No | No | LLM integration | No |
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+ | **License** | Apache 2.0 | Commercial | MIT | Commercial | Apache 2.0 |
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+ | **Pricing** | Free | $$$$ | Free | $$$$ | Free |
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+
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+ **Where Others Win:**
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+ - **RDFox**: More mature OWL reasoning, better incremental maintenance, proven at billion-triple scale
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+ - **Tentris**: Tensor algebra enables certain complex joins faster than traditional indexing
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+ - **AllegroGraph**: Longer track record (25+ years), extensive enterprise integrations, Prolog-like queries
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+ - **Jena**: Largest ecosystem, most tutorials, best community support
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+
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+ **Where rust-kgdb Wins:**
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+ - **Raw Speed**: 35x faster lookups than RDFox due to zero-copy Rust architecture
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+ - **Mobile**: Only RDF database with native iOS/Android FFI bindings
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+ - **AI Integration**: HyperMind is the only type-safe agent framework with schema-aware SPARQL generation
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+ - **Embeddings**: Native HNSW vector search integrated with symbolic reasoning
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+ - **Price**: Enterprise features at open-source pricing
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+
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  ### How We Measured
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  - **Dataset**: [LUBM benchmark](http://swat.cse.lehigh.edu/projects/lubm/) (industry standard since 2005)
@@ -547,10 +603,42 @@ We don't make claims we can't prove. All measurements use **publicly available,
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  - **Methodology**: 10,000+ iterations, cold-start, statistical analysis via [Criterion.rs](https://github.com/bheisler/criterion.rs)
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  - **Comparison**: [Apache Jena 4.x](https://jena.apache.org/), [RDFox 7.x](https://www.oxfordsemantic.tech/) under identical conditions
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550
- **RDFox Baseline Numbers** (from [Oxford Semantic Technologies documentation](https://docs.oxfordsemantic.tech/stable/performance.html)):
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- - RDFox reports ~100µs query latency for simple lookups
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- - RDFox uses ~32 bytes per triple
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- - Our 2.78µs vs their ~100µs = **35x improvement**
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+ **Baseline Sources:**
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+ - **RDFox**: [Oxford Semantic Technologies documentation](https://docs.oxfordsemantic.tech/stable/performance.html) - ~100µs lookups, 32 bytes/triple
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+ - **Tentris**: [ISWC 2020 paper](https://papers.dice-research.org/2020/ISWC_Tentris/tentris_public.pdf) - Tensor-based execution
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+ - **AllegroGraph**: [Franz Inc benchmarks](https://allegrograph.com/benchmark/) - Enterprise scale focus
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+ - **Apache Jena**: [TDB2 documentation](https://jena.apache.org/documentation/tdb2/) - Industry-standard baseline
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+
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+ ### WCOJ (Worst-Case Optimal Join) Comparison
613
+
614
+ WCOJ is the gold standard for multi-way join performance. We implement it; here's how we compare:
615
+
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+ | System | WCOJ Implementation | Complexity Guarantee | Source |
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+ |--------|---------------------|---------------------|--------|
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+ | **rust-kgdb** | Leapfrog Triejoin | O(N^(rho/2)) | Our implementation |
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+ | **RDFox** | Generic Join | O(N^k) traditional | [RDFox architecture](https://docs.oxfordsemantic.tech/stable/architecture.html) |
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+ | **Tentris** | Tensor-based WCOJ | O(N^(rho/2)) | [ISWC 2025 WCOJ paper](https://papers.dice-research.org/2025/ISWC_Tentris-WCOJ-Update/public.pdf) |
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+ | **Jena** | Hash/Merge Join | O(N^k) traditional | Standard implementation |
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+
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+ **Research Foundation:**
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+ - **[Leapfrog Triejoin (Veldhuizen 2014)](https://arxiv.org/abs/1210.0481)** - Original WCOJ algorithm
625
+ - **[Tentris WCOJ Update (DICE 2025)](https://papers.dice-research.org/2025/ISWC_Tentris-WCOJ-Update/public.pdf)** - Latest tensor-based improvements
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+ - **[AGM Bound (Atserias et al. 2008)](https://dl.acm.org/doi/10.1145/1376916.1376918)** - Theoretical optimality proof
627
+
628
+ **Why WCOJ Matters:**
629
+
630
+ Traditional joins: `O(N^k)` where k = number of relations
631
+ WCOJ joins: `O(N^(rho/2))` where rho = fractional edge cover (always <= k)
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+
633
+ For a 5-way join on 1M triples:
634
+ - Traditional: Up to 10^30 intermediate results (impractical)
635
+ - WCOJ: Bounded by actual output size (practical)
636
+
637
+ ```
638
+ Example: Triangle Query (3-way self-join)
639
+ Traditional Join: O(N^3) = 10^18 for 1M triples
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+ WCOJ: O(N^1.5) = 10^9 for 1M triples (1 billion x faster worst-case)
641
+ ```
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642
 
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  **Try it yourself:**
556
644
  ```bash
package/package.json CHANGED
@@ -1,6 +1,6 @@
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1
  {
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2
  "name": "rust-kgdb",
3
- "version": "0.6.71",
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+ "version": "0.6.73",
4
4
  "description": "High-performance RDF/SPARQL database with AI agent framework. GraphDB (449ns lookups, 35x faster than RDFox), GraphFrames analytics (PageRank, motifs), Datalog reasoning, HNSW vector embeddings. HyperMindAgent for schema-aware query generation with audit trails. W3C SPARQL 1.1 compliant. Native performance via Rust + NAPI-RS.",
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  "main": "index.js",
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6
  "types": "index.d.ts",