reasonix 0.33.0 → 0.33.2

package/dist/cli/{chunk-D5DKXIP5.js → chunk-WVJL7ZO2.js}

@@ -1,4 +1,7 @@
 #!/usr/bin/env node
+import {
+  resolveDataPath
+} from "./chunk-DAEAAVDF.js";
 import {
   DeepSeekClient
 } from "./chunk-KMWKGPFZ.js";
@@ -27,7 +30,7 @@ import {
 // src/cli/commands/doctor.ts
 import { existsSync, readFileSync, statSync } from "fs";
 import { homedir } from "os";
-import { dirname, join, resolve } from "path";
+import { join, resolve } from "path";
 async function runDoctorChecks(projectRoot) {
   return Promise.all([
     checkApiKey(),
@@ -161,28 +164,16 @@ async function checkApiReach() {
   }
 }
 async function checkTokenizer() {
-  const candidates = [
-    join(
-      dirname(new URL(import.meta.url).pathname.replace(/^\/([A-Za-z]:)/, "$1")),
-      "..",
-      "..",
-      "..",
-      "data",
-      "deepseek-tokenizer.json.gz"
-    ),
-    join(process.cwd(), "data", "deepseek-tokenizer.json.gz")
-  ];
-  for (const p of candidates) {
-    if (existsSync(p)) {
-      try {
-        const stat = statSync(p);
-        return {
-          label: "tokenizer    ",
-          level: "ok",
-          detail: `${p} (${fmtBytes(stat.size)})`
-        };
-      } catch {
-      }
+  const path = resolveDataPath();
+  if (existsSync(path)) {
+    try {
+      const stat = statSync(path);
+      return {
+        label: "tokenizer    ",
+        level: "ok",
+        detail: `${path} (${fmtBytes(stat.size)})`
+      };
+    } catch {
     }
   }
   return {
@@ -365,4 +356,4 @@ export {
   runDoctorChecks,
   doctorCommand
 };
-//# sourceMappingURL=chunk-D5DKXIP5.js.map
+//# sourceMappingURL=chunk-WVJL7ZO2.js.map

package/dist/cli/chunk-WVJL7ZO2.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../../src/cli/commands/doctor.ts"],"sourcesContent":["/** Plain-text (not Ink) — must work when everything else is broken. fail → exit 1; warn → exit 0. */\n\nimport { existsSync, readFileSync, statSync } from \"node:fs\";\nimport { homedir } from \"node:os\";\nimport { join, resolve } from \"node:path\";\nimport { DeepSeekClient } from \"../../client.js\";\nimport { defaultConfigPath, readConfig, resolveSemanticEmbeddingConfig } from \"../../config.js\";\nimport { loadDotenv } from \"../../env.js\";\nimport { loadHooks } from \"../../hooks.js\";\nimport { indexExists } from \"../../index/semantic/builder.js\";\nimport { checkOllamaStatus } from \"../../index/semantic/ollama-launcher.js\";\nimport { listSessions } from \"../../memory/session.js\";\nimport { resolveDataPath } from \"../../tokenizer.js\";\nimport { VERSION } from \"../../version.js\";\n\nexport type DoctorLevel = \"ok\" | \"warn\" | \"fail\";\n\nexport interface DoctorCheck {\n  label: string;\n  level: DoctorLevel;\n  detail: string;\n}\n\ntype Level = DoctorLevel;\ntype Check = DoctorCheck;\n\nexport async function runDoctorChecks(projectRoot: string): Promise<DoctorCheck[]> {\n  return Promise.all([\n    checkApiKey(),\n    checkConfig(),\n    checkApiReach(),\n    checkTokenizer(),\n    checkSessions(),\n    checkHooks(projectRoot),\n    checkOllama(projectRoot),\n    checkProject(projectRoot),\n  ]);\n}\n\nconst TTY = process.stdout.isTTY && process.env.TERM !== \"dumb\";\n\nfunction color(text: string, code: string): string {\n  if (!TTY) return text;\n  return `\\x1b[${code}m${text}\\x1b[0m`;\n}\n\nfunction badge(level: Level): string {\n  if (level === \"ok\") return color(\"✓\", \"32\");\n  if (level === \"warn\") return color(\"⚠\", \"33\");\n  return color(\"✗\", \"31\");\n}\n\nfunction tail4(s: string): string {\n  return s.length <= 4 ? s : `…${s.slice(-4)}`;\n}\n\nfunction fmtBytes(n: number): string {\n  if (n < 1024) return `${n} B`;\n  if (n < 1024 * 1024) return `${(n / 1024).toFixed(1)} KB`;\n  return `${(n / 1024 / 1024).toFixed(1)} MB`;\n}\n\nasync function checkApiKey(): Promise<Check> {\n  const fromEnv = process.env.DEEPSEEK_API_KEY;\n  if (fromEnv) {\n    return {\n      label: \"api key      \",\n      level: \"ok\",\n      detail: `set via env DEEPSEEK_API_KEY (${tail4(fromEnv)})`,\n    };\n  }\n  try {\n    const cfg = readConfig();\n    if (cfg.apiKey) {\n      return {\n        label: \"api key      \",\n        level: \"ok\",\n        detail: `from ${defaultConfigPath()} (${tail4(cfg.apiKey)})`,\n      };\n    }\n  } catch {\n    /* fall through */\n  }\n  return {\n    label: \"api key      \",\n    level: \"fail\",\n    detail:\n      \"not set — `reasonix setup` to save one, or export DEEPSEEK_API_KEY. Get a key at https://platform.deepseek.com/api_keys\",\n  };\n}\n\nasync function checkConfig(): Promise<Check> {\n  const path = defaultConfigPath();\n  if (!existsSync(path)) {\n    return {\n      label: \"config       \",\n      level: \"warn\",\n      detail: \"missing — running with library defaults. `reasonix setup` writes one.\",\n    };\n  }\n  try {\n    const cfg = readConfig(path);\n    const parts: string[] = [];\n    if (cfg.preset) parts.push(`preset=${cfg.preset}`);\n    if (cfg.editMode) parts.push(`editMode=${cfg.editMode}`);\n    if (cfg.mcp && cfg.mcp.length > 0) parts.push(`mcp=${cfg.mcp.length}`);\n    return {\n      label: \"config       \",\n      level: \"ok\",\n      detail: `${path}${parts.length ? ` (${parts.join(\", \")})` : \"\"}`,\n    };\n  } catch (err) {\n    return {\n      label: \"config       \",\n      level: \"fail\",\n      detail: `${path} unreadable — ${(err as Error).message}`,\n    };\n  }\n}\n\nasync function checkApiReach(): Promise<Check> {\n  const key = process.env.DEEPSEEK_API_KEY ?? readConfig().apiKey;\n  if (!key) {\n    return {\n      label: \"api reach    \",\n      level: \"warn\",\n      detail: \"skipped — no api key to test with\",\n    };\n  }\n  try {\n    const client = new DeepSeekClient({ apiKey: key });\n    const ctl = new AbortController();\n    const timer = setTimeout(() => ctl.abort(), 8_000);\n    let balance: Awaited<ReturnType<DeepSeekClient[\"getBalance\"]>>;\n    try {\n      balance = await client.getBalance({ signal: ctl.signal });\n    } finally {\n      clearTimeout(timer);\n    }\n    if (!balance) {\n      return {\n        label: \"api reach    \",\n        level: \"fail\",\n        detail: \"/user/balance returned null — auth failed or network blocked\",\n      };\n    }\n    if (!balance.is_available) {\n      const info = balance.balance_infos[0];\n      return {\n        label: \"api reach    \",\n        level: \"warn\",\n        detail: `account flagged not-available${info ? ` (${info.total_balance} ${info.currency})` : \"\"} — top up or check your dashboard`,\n      };\n    }\n    const info = balance.balance_infos[0];\n    return {\n      label: \"api reach    \",\n      level: \"ok\",\n      detail: info\n        ? `/user/balance ok — ${info.total_balance} ${info.currency}`\n        : \"/user/balance ok\",\n    };\n  } catch (err) {\n    return {\n      label: \"api reach    \",\n      level: \"fail\",\n      detail: `${(err as Error).message}`,\n    };\n  }\n}\n\nasync function checkTokenizer(): Promise<Check> {\n  // Reuse the runtime's resolver so the doctor never disagrees with what\n  // the tokenizer actually loads — three candidates including a global\n  // npm install probe via createRequire.\n  const path = resolveDataPath();\n  if (existsSync(path)) {\n    try {\n      const stat = statSync(path);\n      return {\n        label: \"tokenizer    \",\n        level: \"ok\",\n        detail: `${path} (${fmtBytes(stat.size)})`,\n      };\n    } catch {\n      /* fall through to warn */\n    }\n  }\n  return {\n    label: \"tokenizer    \",\n    level: \"warn\",\n    detail:\n      \"data/deepseek-tokenizer.json.gz not found — token counts will fall back to char heuristics\",\n  };\n}\n\nasync function checkSessions(): Promise<Check> {\n  try {\n    const list = listSessions();\n    if (list.length === 0) {\n      return {\n        label: \"sessions     \",\n        level: \"ok\",\n        detail: \"0 saved\",\n      };\n    }\n    const totalBytes = list.reduce((s, e) => s + e.size, 0);\n    const oldest = list[list.length - 1]!;\n    const ageDays = Math.floor((Date.now() - oldest.mtime.getTime()) / (24 * 60 * 60 * 1000));\n    const stale = list.filter(\n      (e) => Date.now() - e.mtime.getTime() >= 90 * 24 * 60 * 60 * 1000,\n    ).length;\n    const detail = `${list.length} saved · ${fmtBytes(totalBytes)} · oldest ${ageDays}d`;\n    if (stale > 0) {\n      return {\n        label: \"sessions     \",\n        level: \"warn\",\n        detail: `${detail} · ${stale} idle ≥90d (run \\`reasonix prune-sessions\\`)`,\n      };\n    }\n    return { label: \"sessions     \", level: \"ok\", detail };\n  } catch (err) {\n    return {\n      label: \"sessions     \",\n      level: \"warn\",\n      detail: `cannot list — ${(err as Error).message}`,\n    };\n  }\n}\n\nasync function checkHooks(projectRoot: string): Promise<Check> {\n  try {\n    const all = loadHooks({ projectRoot });\n    const global = all.filter((h) => h.scope === \"global\").length;\n    const project = all.filter((h) => h.scope === \"project\").length;\n    return {\n      label: \"hooks        \",\n      level: \"ok\",\n      detail: `${global} global, ${project} project`,\n    };\n  } catch (err) {\n    return {\n      label: \"hooks        \",\n      level: \"warn\",\n      detail: `couldn't parse settings.json — ${(err as Error).message}`,\n    };\n  }\n}\n\nasync function checkOllama(projectRoot: string): Promise<Check> {\n  let exists = false;\n  try {\n    exists = await indexExists(projectRoot);\n  } catch {\n    /* treat as no index */\n  }\n  if (!exists) {\n    return {\n      label: \"semantic     \",\n      level: \"ok\",\n      detail: \"not in use (no semantic index built; `reasonix index` to enable)\",\n    };\n  }\n  const meta = readSemanticMeta(projectRoot);\n  if (meta?.provider === \"openai-compat\") {\n    const resolved = resolveSemanticEmbeddingConfig();\n    if (resolved.provider !== \"openai-compat\") {\n      return {\n        label: \"semantic     \",\n        level: \"warn\",\n        detail: `index uses openai-compat/${meta.model} but current config resolves to ${resolved.provider}/${resolved.model} — rebuild before searching`,\n      };\n    }\n    return {\n      label: \"semantic     \",\n      level: \"ok\",\n      detail: `openai-compat · ${resolved.baseUrl} · model ${resolved.model} · api key configured`,\n    };\n  }\n  try {\n    const model = meta?.model || process.env.REASONIX_EMBED_MODEL || \"nomic-embed-text\";\n    const status = await checkOllamaStatus(model);\n    if (!status.binaryFound) {\n      return {\n        label: \"semantic     \",\n        level: \"warn\",\n        detail:\n          \"ollama binary not on PATH — semantic_search will fail; install from https://ollama.com\",\n      };\n    }\n    if (!status.daemonRunning) {\n      return {\n        label: \"semantic     \",\n        level: \"warn\",\n        detail:\n          \"ollama daemon not running — `ollama serve` (or call /semantic in TUI to auto-start)\",\n      };\n    }\n    if (!status.modelPulled) {\n      return {\n        label: \"semantic     \",\n        level: \"warn\",\n        detail: `model ${status.modelName} not pulled — \\`ollama pull ${status.modelName}\\``,\n      };\n    }\n    return {\n      label: \"semantic     \",\n      level: \"ok\",\n      detail: `ollama daemon up · model ${status.modelName} ready`,\n    };\n  } catch (err) {\n    return {\n      label: \"semantic     \",\n      level: \"warn\",\n      detail: `probe failed — ${(err as Error).message}`,\n    };\n  }\n}\n\nfunction readSemanticMeta(\n  projectRoot: string,\n): { provider: \"ollama\" | \"openai-compat\"; model: string } | null {\n  try {\n    const raw = readFileSync(join(projectRoot, \".reasonix\", \"semantic\", \"index.meta.json\"), \"utf8\");\n    const parsed = JSON.parse(raw) as { provider?: string; model?: string };\n    return {\n      provider: parsed.provider === \"openai-compat\" ? \"openai-compat\" : \"ollama\",\n      model: typeof parsed.model === \"string\" ? parsed.model : \"\",\n    };\n  } catch {\n    return null;\n  }\n}\n\nasync function checkProject(projectRoot: string): Promise<Check> {\n  // Heuristic: a \"real\" project has either .git, REASONIX.md, or\n  // package.json. Lacking all three, `reasonix code` still works but\n  // @-mentions and the project-memory pin won't surface much.\n  const markers = [\".git\", \"REASONIX.md\", \"package.json\", \"pyproject.toml\", \"Cargo.toml\", \"go.mod\"];\n  const found = markers.filter((m) => existsSync(join(projectRoot, m)));\n  if (found.length === 0) {\n    return {\n      label: \"project      \",\n      level: \"warn\",\n      detail: `${projectRoot} has none of: ${markers.slice(0, 3).join(\", \")} … — \\`reasonix code\\` will still run, but @-mentions and project memory have nothing to anchor`,\n    };\n  }\n  return {\n    label: \"project      \",\n    level: \"ok\",\n    detail: `${projectRoot} (${found.join(\", \")})`,\n  };\n}\n\nexport async function doctorCommand(): Promise<void> {\n  loadDotenv();\n\n  const projectRoot = resolve(process.cwd());\n  console.log(`${color(`reasonix ${VERSION}  ·  doctor`, \"1\")}  (cwd: ${projectRoot})`);\n  console.log(`  home: ${homedir()}`);\n  console.log(\"\");\n\n  // Run independent checks in parallel — saves ~5s when api-reach has\n  // to time out. Each handler swallows its own throws into a `fail`\n  // result so a thrown promise can't kill the whole report.\n  const checks = await runDoctorChecks(projectRoot);\n\n  for (const c of checks) {\n    console.log(`  ${badge(c.level)}  ${c.label}  ${c.detail}`);\n  }\n\n  const ok = checks.filter((c) => c.level === \"ok\").length;\n  const warn = checks.filter((c) => c.level === \"warn\").length;\n  const fail = checks.filter((c) => c.level === \"fail\").length;\n  console.log(\"\");\n  const summary = `${ok} ok · ${warn} warn · ${fail} fail`;\n  if (fail > 0) {\n    console.log(color(summary, \"31\"));\n    process.exit(1);\n  } else if (warn > 0) {\n    console.log(color(summary, \"33\"));\n  } else {\n    console.log(color(summary, \"32\"));\n  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package/dist/cli/{code-F4KJOE3K.js → code-R4TXQQEE.js}

@@ -4,10 +4,10 @@ import {
 } from "./chunk-J5VLP23S.js";
 import {
   chatCommand
-} from "./chunk-LVQX5KGF.js";
+} from "./chunk-OW7IHE6M.js";
 import "./chunk-BQNUJJN7.js";
 import "./chunk-RFX7TYVV.js";
-import "./chunk-Q5GRLZJF.js";
+import "./chunk-63KAV5DX.js";
 import {
   markPhase
 } from "./chunk-CPOV2O73.js";
@@ -18,7 +18,7 @@ import {
   registerMemoryTools,
   registerPlanTool,
   registerTodoTool
-} from "./chunk-Q6YFXW7H.js";
+} from "./chunk-G7M3QWEN.js";
 import "./chunk-I6YIAK6C.js";
 import "./chunk-XJLZ4HKU.js";
 import "./chunk-XHQIK7B6.js";
@@ -26,7 +26,8 @@ import "./chunk-6TMHAK5D.js";
 import "./chunk-SDE5U32Z.js";
 import "./chunk-ZPTSJGX5.js";
 import "./chunk-MHDNZXJJ.js";
-import "./chunk-D5DKXIP5.js";
+import "./chunk-WVJL7ZO2.js";
+import "./chunk-DAEAAVDF.js";
 import "./chunk-KMWKGPFZ.js";
 import "./chunk-3Q3C4W66.js";
 import "./chunk-4DCHFFEY.js";
@@ -148,4 +149,4 @@ async function codeCommand(opts = {}) {
 export {
   codeCommand
 };
-//# sourceMappingURL=code-F4KJOE3K.js.map
+//# sourceMappingURL=code-R4TXQQEE.js.map

package/dist/cli/{code-F4KJOE3K.js.map → code-R4TXQQEE.js.map}

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/commands/code.tsx"],"sourcesContent":["/**\n * `reasonix code [dir]` — opinionated wrapper around `reasonix chat` for\n * code-editing workflows.\n *\n * What it does differently from plain chat:\n *   - Registers native filesystem tools rooted at the given directory\n *     (CWD by default). No subprocess, no `npx install` step, R1-\n *     friendly schemas. Replaced the old `@modelcontextprotocol/server-filesystem`\n *     subprocess in 0.4.9 because its `edit_file` argv shape was the\n *     biggest driver of R1 DSML hallucinations.\n *   - Uses a coding-focused system prompt (src/code/prompt.ts) that\n *     teaches the model to propose edits as SEARCH/REPLACE blocks.\n *   - Defaults to the `smart` preset (reasoner + harvest) because\n *     coding tasks pay back R1 thinking.\n *   - Scopes its session to the directory so projects don't share\n *     conversation history.\n *   - Hooks `codeMode` into the TUI so assistant replies get parsed\n *     for SEARCH/REPLACE blocks and applied on disk after each turn.\n */\n\nimport { readFileSync } from \"node:fs\";\nimport { basename, resolve } from \"node:path\";\nimport { loadEditMode, loadProjectShellAllowed, readConfig } from \"../../config.js\";\nimport { bootstrapSemanticSearchInCodeMode } from \"../../index/semantic/tool.js\";\nimport { sanitizeName } from \"../../memory/session.js\";\nimport { ToolRegistry } from \"../../tools.js\";\nimport { registerChoiceTool } from \"../../tools/choice.js\";\nimport { registerFilesystemTools } from \"../../tools/filesystem.js\";\nimport { JobRegistry } from \"../../tools/jobs.js\";\nimport { registerMemoryTools } from \"../../tools/memory.js\";\nimport { registerPlanTool } from \"../../tools/plan.js\";\nimport { registerShellTools } from \"../../tools/shell.js\";\nimport { registerTodoTool } from \"../../tools/todo.js\";\nimport { markPhase } from \"../startup-profile.js\";\nimport { chatCommand } from \"./chat.js\";\n\nexport interface CodeOptions {\n  /** Directory to root the filesystem tools at. Defaults to process.cwd(). */\n  dir?: string;\n  /** Override the default `smart` model. */\n  model?: string;\n  /** Disable session persistence. */\n  noSession?: boolean;\n  /** Transcript file for replay/diff. */\n  transcript?: string;\n  /** Skip the session picker — always resume prior messages. */\n  forceResume?: boolean;\n  /** Skip the session picker — always wipe prior messages and start fresh. */\n  forceNew?: boolean;\n  /**\n   * Soft USD spend cap. Off by default. Same semantics as `chat`:\n   * warns at 80%, refuses next turn at 100%. Mid-session adjustable\n   * via `/budget <usd>` slash command.\n   */\n  budgetUsd?: number;\n  /** Suppress the auto-launched embedded web dashboard. */\n  noDashboard?: boolean;\n  /** Inline string appended to the code system prompt after the generated base prompt. */\n  systemAppend?: string;\n  /** Path to a UTF-8 text file whose contents are appended to the code system prompt. */\n  systemAppendFile?: string;\n  /** Default true. Pass false (CLI: `--no-alt-screen`) to keep chat output in shell scrollback. */\n  altScreen?: boolean;\n}\n\nexport async function codeCommand(opts: CodeOptions = {}): Promise<void> {\n  markPhase(\"code_command_enter\");\n  const { codeSystemPrompt } = await import(\"../../code/prompt.js\");\n  const rootDir = resolve(opts.dir ?? process.cwd());\n  // Per-directory session so switching projects doesn't mix histories.\n  // `code-<sanitized-basename>` fits the session name rules without\n  // truncating most project names.\n  const session = opts.noSession ? undefined : `code-${sanitizeName(basename(rootDir))}`;\n\n  // Native filesystem tools. No subprocess, ~50-200 ms faster per call\n  // than the MCP server was, and `edit_file` takes a flat SEARCH/REPLACE\n  // shape instead of the `string=\"false\"` JSON-in-string array that\n  // triggered R1's DSML hallucinations all through 0.4.x.\n  const tools = new ToolRegistry();\n  // Background-process registry shared between the shell tools and the\n  // TUI's /jobs + /kill slashes + exit cleanup. One per `reasonix code`\n  // run — orphan prevention on SIGINT / process exit kills everything\n  // it owns, so dev servers don't outlive the Reasonix process.\n  const jobs = new JobRegistry();\n  // Bundled re-registration so `/cwd <path>` can swap every rootDir-\n  // dependent tool atomically. ToolRegistry.register is keyed by name\n  // and overwrites in-place, so re-calling these against the existing\n  // registry replaces the closures cleanly without disturbing tool\n  // specs (names/descriptions/params don't reference rootDir, so the\n  // prefix cache survives).\n  const registerRootedTools = (root: string): void => {\n    registerFilesystemTools(tools, { rootDir: root });\n    registerShellTools(tools, {\n      rootDir: root,\n      // Per-project \"always allow\" list persisted from prior ShellConfirm\n      // choices; merged on top of the built-in allowlist in shell.ts.\n      // GETTER form — re-read every dispatch so a prefix the user adds\n      // via ShellConfirm mid-session takes effect on the next shell call\n      // instead of waiting for `/new` or a relaunch.\n      extraAllowed: () => loadProjectShellAllowed(root),\n      // `yolo` edit-mode disables shell confirmations entirely. Re-read\n      // from config on each dispatch so /mode yolo (or Shift+Tab cycling\n      // through to it) flips the gate live without forcing a relaunch.\n      allowAll: () => loadEditMode() === \"yolo\",\n      jobs,\n    });\n    // `remember` / `forget` / `recall_memory` — cross-session user memory.\n    // Project scope hashes off rootDir so switching projects gets a fresh\n    // per-project memory store; the global scope is shared across runs.\n    registerMemoryTools(tools, { projectRoot: root });\n  };\n  // Async tail to `registerRootedTools`. Kept separate because the FS /\n  // shell / memory re-registration above is sync and must happen before\n  // the next tool dispatch, while semantic-index probing reads disk and\n  // can race ahead in the background. On `/cwd`, App.tsx fires this\n  // after the sync swap and surfaces the result via postInfo.\n  const reBootstrapSemantic = async (root: string): Promise<{ enabled: boolean }> => {\n    const result = await bootstrapSemanticSearchInCodeMode(tools, root);\n    if (!result.enabled) tools.unregister(\"semantic_search\");\n    return result;\n  };\n  registerRootedTools(rootDir);\n  // `submit_plan` is always in the spec list so the prefix cache stays\n  // stable across plan-mode toggles (Pillar 1). The tool itself is a\n  // no-op outside plan mode and throws `PlanProposedError` when the\n  // user has `/plan`-enabled the session.\n  registerPlanTool(tools);\n  // `ask_choice` — branching primitive. Independent of plan mode: the\n  // model uses it to put a 2–4 way choice in front of the user\n  // (strategy, style, library pick) without trying to squeeze the\n  // menu into a submit_plan body. Keeping it always-registered\n  // preserves the prefix cache across plan-mode toggles.\n  registerChoiceTool(tools);\n  // `todo_write` — lightweight in-session task tracker, no approval gate.\n  // Independent of plan mode (readOnly=true so it stays callable in /plan).\n  registerTodoTool(tools);\n  // `run_skill` is intentionally NOT registered here — App.tsx wires it\n  // up with the subagent runner attached, so `runAs: subagent` skills\n  // can spawn isolated child loops. Doing it here would mean the App's\n  // re-registration would shadow the no-runner version, which works\n  // (last write wins) but obscures the wiring.\n\n  // Bootstrap semantic_search. Silent: registers the tool when an\n  // on-disk index already exists, skips entirely otherwise. Setup\n  // happens via the explicit `reasonix index` command — never\n  // by surprise on launch.\n  markPhase(\"semantic_bootstrap_start\");\n  const semantic = await reBootstrapSemantic(rootDir);\n  markPhase(\n    semantic.enabled ? \"semantic_bootstrap_done_enabled\" : \"semantic_bootstrap_done_skipped\",\n  );\n\n  process.stderr.write(\n    `▸ reasonix code: rooted at ${rootDir}, session \"${session ?? \"(ephemeral)\"}\" · ${tools.size} native tool(s)${\n      semantic.enabled ? \" · semantic_search on\" : \"\"\n    }\\n`,\n  );\n\n  // Belt-and-suspenders cleanup: even though spawn(detached:false)\n  // should tie child processes to the parent's lifetime, Windows cmd.exe\n  // wrappers occasionally leak. We DON'T install SIGINT/SIGTERM\n  // handlers here — that overrode Node's default \"exit on Ctrl+C\" with\n  // a silent no-op, which made Ctrl+C feel broken in the TUI. App.tsx\n  // owns the SIGINT path now (it shows the quit-armed banner and calls\n  // exit() on confirmation); this 'exit' hook just guarantees the job\n  // registry is drained on the way out, regardless of which exit path\n  // fired.\n  process.once(\"exit\", () => {\n    void jobs.shutdown();\n  });\n\n  let systemAppendFileContents: string | undefined;\n  if (opts.systemAppend !== undefined && opts.systemAppend.trim().length === 0) {\n    process.stderr.write(\"--system-append is empty — no prompt text will be appended\\n\");\n  }\n  if (opts.systemAppendFile) {\n    const filePath = resolve(opts.systemAppendFile);\n    try {\n      systemAppendFileContents = readFileSync(filePath, \"utf8\");\n    } catch (err) {\n      const e = err as NodeJS.ErrnoException;\n      process.stderr.write(\n        `Error: cannot read --system-append-file \"${filePath}\": ${e.code ? `[${e.code}] ` : \"\"}${e.message}\\n`,\n      );\n      process.exit(1);\n    }\n  }\n\n  await chatCommand({\n    model: opts.model ?? \"deepseek-v4-flash\",\n    budgetUsd: opts.budgetUsd,\n    system: codeSystemPrompt(rootDir, {\n      hasSemanticSearch: semantic.enabled,\n      systemAppend: opts.systemAppend,\n      systemAppendFile: systemAppendFileContents,\n    }),\n    transcript: opts.transcript,\n    session,\n    seedTools: tools,\n    codeMode: {\n      rootDir,\n      jobs,\n      reregisterTools: registerRootedTools,\n      reBootstrapSemantic,\n    },\n    mcp: readConfig().mcp,\n    forceResume: opts.forceResume,\n    forceNew: opts.forceNew,\n    noDashboard: opts.noDashboard,\n    altScreen: opts.altScreen,\n  });\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAoBA,SAAS,oBAAoB;AAC7B,SAAS,UAAU,eAAe;AA4ClC,eAAsB,YAAY,OAAoB,CAAC,GAAkB;AACvE,YAAU,oBAAoB;AAC9B,QAAM,EAAE,iBAAiB,IAAI,MAAM,OAAO,sBAAsB;AAChE,QAAM,UAAU,QAAQ,KAAK,OAAO,QAAQ,IAAI,CAAC;AAIjD,QAAM,UAAU,KAAK,YAAY,SAAY,QAAQ,aAAa,SAAS,OAAO,CAAC,CAAC;AAMpF,QAAM,QAAQ,IAAI,aAAa;AAK/B,QAAM,OAAO,IAAI,YAAY;AAO7B,QAAM,sBAAsB,CAAC,SAAuB;AAClD,4BAAwB,OAAO,EAAE,SAAS,KAAK,CAAC;AAChD,uBAAmB,OAAO;AAAA,MACxB,SAAS;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,MAMT,cAAc,MAAM,wBAAwB,IAAI;AAAA;AAAA;AAAA;AAAA,MAIhD,UAAU,MAAM,aAAa,MAAM;AAAA,MACnC;AAAA,IACF,CAAC;AAID,wBAAoB,OAAO,EAAE,aAAa,KAAK,CAAC;AAAA,EAClD;AAMA,QAAM,sBAAsB,OAAO,SAAgD;AACjF,UAAM,SAAS,MAAM,kCAAkC,OAAO,IAAI;AAClE,QAAI,CAAC,OAAO,QAAS,OAAM,WAAW,iBAAiB;AACvD,WAAO;AAAA,EACT;AACA,sBAAoB,OAAO;AAK3B,mBAAiB,KAAK;AAMtB,qBAAmB,KAAK;AAGxB,mBAAiB,KAAK;AAWtB,YAAU,0BAA0B;AACpC,QAAM,WAAW,MAAM,oBAAoB,OAAO;AAClD;AAAA,IACE,SAAS,UAAU,oCAAoC;AAAA,EACzD;AAEA,UAAQ,OAAO;AAAA,IACb,mCAA8B,OAAO,cAAc,WAAW,aAAa,UAAO,MAAM,IAAI,kBAC1F,SAAS,UAAU,6BAA0B,EAC/C;AAAA;AAAA,EACF;AAWA,UAAQ,KAAK,QAAQ,MAAM;AACzB,SAAK,KAAK,SAAS;AAAA,EACrB,CAAC;AAED,MAAI;AACJ,MAAI,KAAK,iBAAiB,UAAa,KAAK,aAAa,KAAK,EAAE,WAAW,GAAG;AAC5E,YAAQ,OAAO,MAAM,mEAA8D;AAAA,EACrF;AACA,MAAI,KAAK,kBAAkB;AACzB,UAAM,WAAW,QAAQ,KAAK,gBAAgB;AAC9C,QAAI;AACF,iCAA2B,aAAa,UAAU,MAAM;AAAA,IAC1D,SAAS,KAAK;AACZ,YAAM,IAAI;AACV,cAAQ,OAAO;AAAA,QACb,4CAA4C,QAAQ,MAAM,EAAE,OAAO,IAAI,EAAE,IAAI,OAAO,EAAE,GAAG,EAAE,OAAO;AAAA;AAAA,MACpG;AACA,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF;AAEA,QAAM,YAAY;AAAA,IAChB,OAAO,KAAK,SAAS;AAAA,IACrB,WAAW,KAAK;AAAA,IAChB,QAAQ,iBAAiB,SAAS;AAAA,MAChC,mBAAmB,SAAS;AAAA,MAC5B,cAAc,KAAK;AAAA,MACnB,kBAAkB;AAAA,IACpB,CAAC;AAAA,IACD,YAAY,KAAK;AAAA,IACjB;AAAA,IACA,WAAW;AAAA,IACX,UAAU;AAAA,MACR;AAAA,MACA;AAAA,MACA,iBAAiB;AAAA,MACjB;AAAA,IACF;AAAA,IACA,KAAK,WAAW,EAAE;AAAA,IAClB,aAAa,KAAK;AAAA,IAClB,UAAU,KAAK;AAAA,IACf,aAAa,KAAK;AAAA,IAClB,WAAW,KAAK;AAAA,EAClB,CAAC;AACH;","names":[]}
+{"version":3,"sources":["../../src/cli/commands/code.tsx"],"sourcesContent":["/**\n * `reasonix code [dir]` — opinionated wrapper around `reasonix chat` for\n * code-editing workflows.\n *\n * What it does differently from plain chat:\n *   - Registers native filesystem tools rooted at the given directory\n *     (CWD by default). No subprocess, no `npx install` step, R1-\n *     friendly schemas. Replaced the old `@modelcontextprotocol/server-filesystem`\n *     subprocess in 0.4.9 because its `edit_file` argv shape was the\n *     biggest driver of R1 DSML hallucinations.\n *   - Uses a coding-focused system prompt (src/code/prompt.ts) that\n *     teaches the model to propose edits as SEARCH/REPLACE blocks.\n *   - Defaults to the `smart` preset (reasoner + harvest) because\n *     coding tasks pay back R1 thinking.\n *   - Scopes its session to the directory so projects don't share\n *     conversation history.\n *   - Hooks `codeMode` into the TUI so assistant replies get parsed\n *     for SEARCH/REPLACE blocks and applied on disk after each turn.\n */\n\nimport { readFileSync } from \"node:fs\";\nimport { basename, resolve } from \"node:path\";\nimport { loadEditMode, loadProjectShellAllowed, readConfig } from \"../../config.js\";\nimport { bootstrapSemanticSearchInCodeMode } from \"../../index/semantic/tool.js\";\nimport { sanitizeName } from \"../../memory/session.js\";\nimport { ToolRegistry } from \"../../tools.js\";\nimport { registerChoiceTool } from \"../../tools/choice.js\";\nimport { registerFilesystemTools } from \"../../tools/filesystem.js\";\nimport { JobRegistry } from \"../../tools/jobs.js\";\nimport { registerMemoryTools } from \"../../tools/memory.js\";\nimport { registerPlanTool } from \"../../tools/plan.js\";\nimport { registerShellTools } from \"../../tools/shell.js\";\nimport { registerTodoTool } from \"../../tools/todo.js\";\nimport { markPhase } from \"../startup-profile.js\";\nimport { chatCommand } from \"./chat.js\";\n\nexport interface CodeOptions {\n  /** Directory to root the filesystem tools at. Defaults to process.cwd(). */\n  dir?: string;\n  /** Override the default `smart` model. */\n  model?: string;\n  /** Disable session persistence. */\n  noSession?: boolean;\n  /** Transcript file for replay/diff. */\n  transcript?: string;\n  /** Skip the session picker — always resume prior messages. */\n  forceResume?: boolean;\n  /** Skip the session picker — always wipe prior messages and start fresh. */\n  forceNew?: boolean;\n  /**\n   * Soft USD spend cap. Off by default. Same semantics as `chat`:\n   * warns at 80%, refuses next turn at 100%. Mid-session adjustable\n   * via `/budget <usd>` slash command.\n   */\n  budgetUsd?: number;\n  /** Suppress the auto-launched embedded web dashboard. */\n  noDashboard?: boolean;\n  /** Inline string appended to the code system prompt after the generated base prompt. */\n  systemAppend?: string;\n  /** Path to a UTF-8 text file whose contents are appended to the code system prompt. */\n  systemAppendFile?: string;\n  /** Default true. Pass false (CLI: `--no-alt-screen`) to keep chat output in shell scrollback. */\n  altScreen?: boolean;\n}\n\nexport async function codeCommand(opts: CodeOptions = {}): Promise<void> {\n  markPhase(\"code_command_enter\");\n  const { codeSystemPrompt } = await import(\"../../code/prompt.js\");\n  const rootDir = resolve(opts.dir ?? process.cwd());\n  // Per-directory session so switching projects doesn't mix histories.\n  // `code-<sanitized-basename>` fits the session name rules without\n  // truncating most project names.\n  const session = opts.noSession ? undefined : `code-${sanitizeName(basename(rootDir))}`;\n\n  // Native filesystem tools. No subprocess, ~50-200 ms faster per call\n  // than the MCP server was, and `edit_file` takes a flat SEARCH/REPLACE\n  // shape instead of the `string=\"false\"` JSON-in-string array that\n  // triggered R1's DSML hallucinations all through 0.4.x.\n  const tools = new ToolRegistry();\n  // Background-process registry shared between the shell tools and the\n  // TUI's /jobs + /kill slashes + exit cleanup. One per `reasonix code`\n  // run — orphan prevention on SIGINT / process exit kills everything\n  // it owns, so dev servers don't outlive the Reasonix process.\n  const jobs = new JobRegistry();\n  // Bundled re-registration so `/cwd <path>` can swap every rootDir-\n  // dependent tool atomically. ToolRegistry.register is keyed by name\n  // and overwrites in-place, so re-calling these against the existing\n  // registry replaces the closures cleanly without disturbing tool\n  // specs (names/descriptions/params don't reference rootDir, so the\n  // prefix cache survives).\n  const registerRootedTools = (root: string): void => {\n    registerFilesystemTools(tools, { rootDir: root });\n    registerShellTools(tools, {\n      rootDir: root,\n      // Per-project \"always allow\" list persisted from prior ShellConfirm\n      // choices; merged on top of the built-in allowlist in shell.ts.\n      // GETTER form — re-read every dispatch so a prefix the user adds\n      // via ShellConfirm mid-session takes effect on the next shell call\n      // instead of waiting for `/new` or a relaunch.\n      extraAllowed: () => loadProjectShellAllowed(root),\n      // `yolo` edit-mode disables shell confirmations entirely. Re-read\n      // from config on each dispatch so /mode yolo (or Shift+Tab cycling\n      // through to it) flips the gate live without forcing a relaunch.\n      allowAll: () => loadEditMode() === \"yolo\",\n      jobs,\n    });\n    // `remember` / `forget` / `recall_memory` — cross-session user memory.\n    // Project scope hashes off rootDir so switching projects gets a fresh\n    // per-project memory store; the global scope is shared across runs.\n    registerMemoryTools(tools, { projectRoot: root });\n  };\n  // Async tail to `registerRootedTools`. Kept separate because the FS /\n  // shell / memory re-registration above is sync and must happen before\n  // the next tool dispatch, while semantic-index probing reads disk and\n  // can race ahead in the background. On `/cwd`, App.tsx fires this\n  // after the sync swap and surfaces the result via postInfo.\n  const reBootstrapSemantic = async (root: string): Promise<{ enabled: boolean }> => {\n    const result = await bootstrapSemanticSearchInCodeMode(tools, root);\n    if (!result.enabled) tools.unregister(\"semantic_search\");\n    return result;\n  };\n  registerRootedTools(rootDir);\n  // `submit_plan` is always in the spec list so the prefix cache stays\n  // stable across plan-mode toggles (Pillar 1). The tool itself is a\n  // no-op outside plan mode and throws `PlanProposedError` when the\n  // user has `/plan`-enabled the session.\n  registerPlanTool(tools);\n  // `ask_choice` — branching primitive. Independent of plan mode: the\n  // model uses it to put a 2–4 way choice in front of the user\n  // (strategy, style, library pick) without trying to squeeze the\n  // menu into a submit_plan body. Keeping it always-registered\n  // preserves the prefix cache across plan-mode toggles.\n  registerChoiceTool(tools);\n  // `todo_write` — lightweight in-session task tracker, no approval gate.\n  // Independent of plan mode (readOnly=true so it stays callable in /plan).\n  registerTodoTool(tools);\n  // `run_skill` is intentionally NOT registered here — App.tsx wires it\n  // up with the subagent runner attached, so `runAs: subagent` skills\n  // can spawn isolated child loops. Doing it here would mean the App's\n  // re-registration would shadow the no-runner version, which works\n  // (last write wins) but obscures the wiring.\n\n  // Bootstrap semantic_search. Silent: registers the tool when an\n  // on-disk index already exists, skips entirely otherwise. Setup\n  // happens via the explicit `reasonix index` command — never\n  // by surprise on launch.\n  markPhase(\"semantic_bootstrap_start\");\n  const semantic = await reBootstrapSemantic(rootDir);\n  markPhase(\n    semantic.enabled ? \"semantic_bootstrap_done_enabled\" : \"semantic_bootstrap_done_skipped\",\n  );\n\n  process.stderr.write(\n    `▸ reasonix code: rooted at ${rootDir}, session \"${session ?? \"(ephemeral)\"}\" · ${tools.size} native tool(s)${\n      semantic.enabled ? \" · semantic_search on\" : \"\"\n    }\\n`,\n  );\n\n  // Belt-and-suspenders cleanup: even though spawn(detached:false)\n  // should tie child processes to the parent's lifetime, Windows cmd.exe\n  // wrappers occasionally leak. We DON'T install SIGINT/SIGTERM\n  // handlers here — that overrode Node's default \"exit on Ctrl+C\" with\n  // a silent no-op, which made Ctrl+C feel broken in the TUI. App.tsx\n  // owns the SIGINT path now (it shows the quit-armed banner and calls\n  // exit() on confirmation); this 'exit' hook just guarantees the job\n  // registry is drained on the way out, regardless of which exit path\n  // fired.\n  process.once(\"exit\", () => {\n    void jobs.shutdown();\n  });\n\n  let systemAppendFileContents: string | undefined;\n  if (opts.systemAppend !== undefined && opts.systemAppend.trim().length === 0) {\n    process.stderr.write(\"--system-append is empty — no prompt text will be appended\\n\");\n  }\n  if (opts.systemAppendFile) {\n    const filePath = resolve(opts.systemAppendFile);\n    try {\n      systemAppendFileContents = readFileSync(filePath, \"utf8\");\n    } catch (err) {\n      const e = err as NodeJS.ErrnoException;\n      process.stderr.write(\n        `Error: cannot read --system-append-file \"${filePath}\": ${e.code ? `[${e.code}] ` : \"\"}${e.message}\\n`,\n      );\n      process.exit(1);\n    }\n  }\n\n  await chatCommand({\n    model: opts.model ?? \"deepseek-v4-flash\",\n    budgetUsd: opts.budgetUsd,\n    system: codeSystemPrompt(rootDir, {\n      hasSemanticSearch: semantic.enabled,\n      systemAppend: opts.systemAppend,\n      systemAppendFile: systemAppendFileContents,\n    }),\n    transcript: opts.transcript,\n    session,\n    seedTools: tools,\n    codeMode: {\n      rootDir,\n      jobs,\n      reregisterTools: registerRootedTools,\n      reBootstrapSemantic,\n    },\n    mcp: readConfig().mcp,\n    forceResume: opts.forceResume,\n    forceNew: opts.forceNew,\n    noDashboard: opts.noDashboard,\n    altScreen: opts.altScreen,\n  });\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAoBA,SAAS,oBAAoB;AAC7B,SAAS,UAAU,eAAe;AA4ClC,eAAsB,YAAY,OAAoB,CAAC,GAAkB;AACvE,YAAU,oBAAoB;AAC9B,QAAM,EAAE,iBAAiB,IAAI,MAAM,OAAO,sBAAsB;AAChE,QAAM,UAAU,QAAQ,KAAK,OAAO,QAAQ,IAAI,CAAC;AAIjD,QAAM,UAAU,KAAK,YAAY,SAAY,QAAQ,aAAa,SAAS,OAAO,CAAC,CAAC;AAMpF,QAAM,QAAQ,IAAI,aAAa;AAK/B,QAAM,OAAO,IAAI,YAAY;AAO7B,QAAM,sBAAsB,CAAC,SAAuB;AAClD,4BAAwB,OAAO,EAAE,SAAS,KAAK,CAAC;AAChD,uBAAmB,OAAO;AAAA,MACxB,SAAS;AAAA;AAAA;AAAA;AAAA;AAAA;AAAA,MAMT,cAAc,MAAM,wBAAwB,IAAI;AAAA;AAAA;AAAA;AAAA,MAIhD,UAAU,MAAM,aAAa,MAAM;AAAA,MACnC;AAAA,IACF,CAAC;AAID,wBAAoB,OAAO,EAAE,aAAa,KAAK,CAAC;AAAA,EAClD;AAMA,QAAM,sBAAsB,OAAO,SAAgD;AACjF,UAAM,SAAS,MAAM,kCAAkC,OAAO,IAAI;AAClE,QAAI,CAAC,OAAO,QAAS,OAAM,WAAW,iBAAiB;AACvD,WAAO;AAAA,EACT;AACA,sBAAoB,OAAO;AAK3B,mBAAiB,KAAK;AAMtB,qBAAmB,KAAK;AAGxB,mBAAiB,KAAK;AAWtB,YAAU,0BAA0B;AACpC,QAAM,WAAW,MAAM,oBAAoB,OAAO;AAClD;AAAA,IACE,SAAS,UAAU,oCAAoC;AAAA,EACzD;AAEA,UAAQ,OAAO;AAAA,IACb,mCAA8B,OAAO,cAAc,WAAW,aAAa,UAAO,MAAM,IAAI,kBAC1F,SAAS,UAAU,6BAA0B,EAC/C;AAAA;AAAA,EACF;AAWA,UAAQ,KAAK,QAAQ,MAAM;AACzB,SAAK,KAAK,SAAS;AAAA,EACrB,CAAC;AAED,MAAI;AACJ,MAAI,KAAK,iBAAiB,UAAa,KAAK,aAAa,KAAK,EAAE,WAAW,GAAG;AAC5E,YAAQ,OAAO,MAAM,mEAA8D;AAAA,EACrF;AACA,MAAI,KAAK,kBAAkB;AACzB,UAAM,WAAW,QAAQ,KAAK,gBAAgB;AAC9C,QAAI;AACF,iCAA2B,aAAa,UAAU,MAAM;AAAA,IAC1D,SAAS,KAAK;AACZ,YAAM,IAAI;AACV,cAAQ,OAAO;AAAA,QACb,4CAA4C,QAAQ,MAAM,EAAE,OAAO,IAAI,EAAE,IAAI,OAAO,EAAE,GAAG,EAAE,OAAO;AAAA;AAAA,MACpG;AACA,cAAQ,KAAK,CAAC;AAAA,IAChB;AAAA,EACF;AAEA,QAAM,YAAY;AAAA,IAChB,OAAO,KAAK,SAAS;AAAA,IACrB,WAAW,KAAK;AAAA,IAChB,QAAQ,iBAAiB,SAAS;AAAA,MAChC,mBAAmB,SAAS;AAAA,MAC5B,cAAc,KAAK;AAAA,MACnB,kBAAkB;AAAA,IACpB,CAAC;AAAA,IACD,YAAY,KAAK;AAAA,IACjB;AAAA,IACA,WAAW;AAAA,IACX,UAAU;AAAA,MACR;AAAA,MACA;AAAA,MACA,iBAAiB;AAAA,MACjB;AAAA,IACF;AAAA,IACA,KAAK,WAAW,EAAE;AAAA,IAClB,aAAa,KAAK;AAAA,IAClB,UAAU,KAAK;AAAA,IACf,aAAa,KAAK;AAAA,IAClB,WAAW,KAAK;AAAA,EAClB,CAAC;AACH;","names":[]}

package/dist/cli/{doctor-3TGB2NZN.js → doctor-V5HLCMSQ.js}

@@ -2,7 +2,8 @@
 import {
   doctorCommand,
   runDoctorChecks
-} from "./chunk-D5DKXIP5.js";
+} from "./chunk-WVJL7ZO2.js";
+import "./chunk-DAEAAVDF.js";
 import "./chunk-KMWKGPFZ.js";
 import "./chunk-3Q3C4W66.js";
 import "./chunk-RZILUXUC.js";
@@ -16,4 +17,4 @@ export {
   doctorCommand,
   runDoctorChecks
 };
-//# sourceMappingURL=doctor-3TGB2NZN.js.map
+//# sourceMappingURL=doctor-V5HLCMSQ.js.map

package/dist/cli/index.js

@@ -2,7 +2,7 @@
 import {
   markPhase
 } from "./chunk-CPOV2O73.js";
-import "./chunk-Q6YFXW7H.js";
+import "./chunk-G7M3QWEN.js";
 import "./chunk-I6YIAK6C.js";
 import "./chunk-XJLZ4HKU.js";
 import "./chunk-XHQIK7B6.js";
@@ -12,6 +12,7 @@ import {
 import {
   resolvePreset
 } from "./chunk-MHDNZXJJ.js";
+import "./chunk-DAEAAVDF.js";
 import "./chunk-KMWKGPFZ.js";
 import "./chunk-3Q3C4W66.js";
 import "./chunk-W4LDFAZ6.js";
@@ -128,7 +129,7 @@ program.action(async (opts) => {
     (msg) => process.stderr.write(`${msg}
 `)
   );
-  const { chatCommand } = await import("./chat-EIFLHBZ6.js");
+  const { chatCommand } = await import("./chat-ZMSAXE77.js");
   await chatCommand({
     model: defaults.model,
     system: applyMemoryStack(DEFAULT_SYSTEM, process.cwd()),
@@ -142,7 +143,7 @@ program.command("setup").description(t("cli.setup")).action(async () => {
   await setupCommand({});
 });
 program.command("code [dir]").description(t("cli.code")).option("-m, --model <id>", t("ui.modelOverride")).option("--no-session", t("ui.noSession")).option("-r, --resume", t("ui.resumeHint")).option("-n, --new", t("ui.newHint")).option("--transcript <path>", t("ui.transcriptHint")).option("--budget <usd>", t("ui.budgetHint"), (v) => Number.parseFloat(v)).option("--no-dashboard", t("ui.noDashboard")).option("--no-alt-screen", "keep chat output in shell scrollback (legacy mode, ghost-prone)").option("--system-append <prompt>", t("ui.systemAppendHint")).option("--system-append-file <path>", t("ui.systemAppendFileHint")).action(async (dir, opts) => {
-  const { codeCommand } = await import("./code-F4KJOE3K.js");
+  const { codeCommand } = await import("./code-R4TXQQEE.js");
   await codeCommand({
     dir,
     model: opts.model,
@@ -177,7 +178,7 @@ program.command("chat").description(t("cli.chat")).option("-m, --model <id>", t(
     (msg) => process.stderr.write(`${msg}
 `)
   );
-  const { chatCommand } = await import("./chat-EIFLHBZ6.js");
+  const { chatCommand } = await import("./chat-ZMSAXE77.js");
   await chatCommand({
     model: defaults.model,
     system: applyMemoryStack(opts.system, process.cwd()),
@@ -204,7 +205,7 @@ program.command("run <task>").description(t("cli.run")).option("-m, --model <id>
     preset: opts.preset,
     noConfig: opts.config === false
   });
-  const { runCommand } = await import("./run-JMEOTQCG.js");
+  const { runCommand } = await import("./run-HK3FP266.js");
   await runCommand({
     task,
     model: defaults.model,
@@ -220,7 +221,7 @@ program.command("stats [transcript]").description(t("cli.stats")).action(async (
   statsCommand({ transcript });
 });
 program.command("doctor").description(t("cli.doctor")).action(async () => {
-  const { doctorCommand } = await import("./doctor-3TGB2NZN.js");
+  const { doctorCommand } = await import("./doctor-V5HLCMSQ.js");
   await doctorCommand();
 });
 program.command("commit").description(t("cli.commit")).option("-m, --model <id>", t("ui.modelOverrideFlash")).option("-y, --yes", t("ui.skipConfirmHint")).action(async (opts) => {
@@ -228,7 +229,7 @@ program.command("commit").description(t("cli.commit")).option("-m, --model <id>"
   await commitCommand({ model: opts.model, yes: !!opts.yes });
 });
 program.command("sessions [name]").description(t("cli.sessions")).option("-v, --verbose", t("ui.verboseHint")).action(async (name, opts) => {
-  const { sessionsCommand } = await import("./sessions-MOJAALJI.js");
+  const { sessionsCommand } = await import("./sessions-3XU2GGHX.js");
   sessionsCommand({ name, verbose: !!opts.verbose });
 });
 program.command("prune-sessions").description(t("cli.pruneSessions")).option("--days <n>", t("ui.pruneDaysHint"), (v) => Number.parseInt(v, 10)).option("--dry-run", t("ui.pruneDryRunHint")).action(async (opts) => {
@@ -247,7 +248,7 @@ program.command("events <name>").description(t("cli.events")).option("--type <ty
   });
 });
 program.command("replay <transcript>").description(t("cli.replay")).option("--print", t("ui.printHint")).option("--head <n>", t("ui.headHint"), (v) => Number.parseInt(v, 10)).option("--tail <n>", t("ui.tailHint"), (v) => Number.parseInt(v, 10)).action(async (transcript, opts) => {
-  const { replayCommand } = await import("./replay-TMJASRC4.js");
+  const { replayCommand } = await import("./replay-Q43DSMG6.js");
   await replayCommand({
     path: transcript,
     print: !!opts.print,
@@ -334,7 +335,7 @@ mcp.command("inspect <spec>").description(t("ui.mcpInspectDescription")).option(
   }
 });
 program.command("version").description(t("cli.version")).action(async () => {
-  const { versionCommand } = await import("./version-3MYFE4G6.js");
+  const { versionCommand } = await import("./version-5SGI2SEE.js");
   versionCommand();
 });
 program.command("update").description(t("cli.update")).option("--dry-run", t("ui.dryRunHint")).action(async (opts) => {

package/dist/cli/index.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/index.ts","../../src/cli/resolve.ts"],"sourcesContent":["import { Command } from \"commander\";\nimport { readConfig } from \"../config.js\";\nimport { t } from \"../i18n/index.js\";\nimport { VERSION } from \"../index.js\";\nimport { listSessions } from \"../memory/session.js\";\nimport { applyMemoryStack } from \"../memory/user.js\";\nimport { ESCALATION_CONTRACT } from \"../prompt-fragments.js\";\nimport { resolveContinueFlag, resolveDefaults } from \"./resolve.js\";\nimport { markPhase } from \"./startup-profile.js\";\n\nmarkPhase(\"cli_module_loaded\");\n\nconst DEFAULT_SYSTEM = `You are Reasonix, a helpful DeepSeek-powered assistant. Be concise and accurate. Use tools when available.\n\n# Cite or shut up — non-negotiable\n\nEvery factual claim about a codebase must be backed by evidence. Reasonix VALIDATES your citations — broken paths render in **red strikethrough with ❌** in front of the user.\n\n**Positive claims** — append a markdown link:\n- ✅ \\`The MCP client supports listResources [listResources](src/mcp/client.ts:142).\\`\n- ❌ \\`The MCP client supports listResources.\\` ← unverifiable, do not write.\n\n**Negative claims** (\"X is missing\", \"Y isn't implemented\", \"lacks Z\") are the #1 hallucination shape. STOP before writing them. If you have a search tool, call it first; if the search returns nothing, cite the search itself as evidence (\\`No matches for \"foo\" in src/\\`). If you have no tool, qualify hard: \"I haven't verified — this is a guess.\"\n\nAsserting absence without checking is how evaluative answers go wrong. Treat the urge to write \"missing\" as a red flag in your own reasoning.\n\n# Don't invent what changes — search instead\n\nYour training data has a cutoff. When an answer's correctness depends on something that changes over time (the user is asking what's happening, not what's true) and a search tool is available, search first. Inventing currently-correct values from training memory is the most common way these answers go wrong, and the user usually can't tell until much later.\n\nThe signal isn't a topic list — it's: \"if I'm wrong about this, is it because reality moved on?\". If yes, ground the answer in fresh evidence; if no (definitions, mechanisms, well-established APIs), answer from memory.\n\n${ESCALATION_CONTRACT}`;\n\n/** Lenient: malformed → undefined (no cap) so a bad flag doesn't abort launch. */\nfunction parseBudgetFlag(raw: number | undefined): number | undefined {\n  if (raw === undefined) return undefined;\n  if (!Number.isFinite(raw) || raw <= 0) {\n    process.stderr.write(\n      `▲ ignoring --budget=${raw} (must be a positive number) — running with no cap\\n`,\n    );\n    return undefined;\n  }\n  return raw;\n}\n\nconst program = new Command();\nprogram\n  .name(\"reasonix\")\n  .description(t(\"cli.description\"))\n  .version(VERSION)\n  .option(\"-c, --continue\", t(\"cli.continue\"));\n\n// `reasonix` with no subcommand → launch the friendliest flow.\n// First run (no config yet) → interactive setup wizard.\n// Otherwise → chat with saved defaults. This is the \"one command to\n// rule them all\" entry for non-power-users: they don't need to learn\n// `chat` / `setup` / `--mcp` — just type `reasonix`.\nprogram.action(async (opts: { continue?: boolean }) => {\n  const cfg = readConfig();\n  if (!cfg.setupCompleted) {\n    const { setupCommand } = await import(\"./commands/setup.js\");\n    await setupCommand({});\n    return;\n  }\n  const defaults = resolveDefaults({});\n  const continueOpts = resolveContinueFlag(\n    opts.continue,\n    defaults.session,\n    () => listSessions()[0],\n    (msg) => process.stderr.write(`${msg}\\n`),\n  );\n  const { chatCommand } = await import(\"./commands/chat.js\");\n  await chatCommand({\n    model: defaults.model,\n    system: applyMemoryStack(DEFAULT_SYSTEM, process.cwd()),\n    session: continueOpts.session,\n    mcp: defaults.mcp,\n    forceResume: continueOpts.forceResume,\n  });\n});\n\nprogram\n  .command(\"setup\")\n  .description(t(\"cli.setup\"))\n  .action(async () => {\n    const { setupCommand } = await import(\"./commands/setup.js\");\n    await setupCommand({});\n  });\n\nprogram\n  .command(\"code [dir]\")\n  .description(t(\"cli.code\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelOverride\"))\n  .option(\"--no-session\", t(\"ui.noSession\"))\n  .option(\"-r, --resume\", t(\"ui.resumeHint\"))\n  .option(\"-n, --new\", t(\"ui.newHint\"))\n  .option(\"--transcript <path>\", t(\"ui.transcriptHint\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHint\"), (v) => Number.parseFloat(v))\n  .option(\"--no-dashboard\", t(\"ui.noDashboard\"))\n  .option(\"--no-alt-screen\", \"keep chat output in shell scrollback (legacy mode, ghost-prone)\")\n  .option(\"--system-append <prompt>\", t(\"ui.systemAppendHint\"))\n  .option(\"--system-append-file <path>\", t(\"ui.systemAppendFileHint\"))\n  .action(async (dir: string | undefined, opts) => {\n    const { codeCommand } = await import(\"./commands/code.js\");\n    await codeCommand({\n      dir,\n      model: opts.model,\n      noSession: opts.session === false,\n      transcript: opts.transcript,\n      forceResume: !!opts.resume,\n      forceNew: !!opts.new,\n      budgetUsd: parseBudgetFlag(opts.budget),\n      noDashboard: opts.dashboard === false,\n      systemAppend: opts.systemAppend,\n      systemAppendFile: opts.systemAppendFile,\n      altScreen: opts.altScreen !== false,\n    });\n  });\n\nprogram\n  .command(\"chat\")\n  .description(t(\"cli.chat\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelIdHint\"))\n  .option(\"-s, --system <prompt>\", t(\"ui.systemPromptHint\"), DEFAULT_SYSTEM)\n  .option(\"--transcript <path>\", t(\"ui.transcriptHint\"))\n  .option(\"--preset <name>\", t(\"ui.presetHint\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHint\"), (v) => Number.parseFloat(v))\n  .option(\"--session <name>\", t(\"ui.sessionNameHint\"))\n  .option(\"--no-session\", t(\"ui.ephemeralHint\"))\n  .option(\"-r, --resume\", t(\"ui.resumeHint\"))\n  .option(\"-c, --continue\", t(\"cli.continue\"))\n  .option(\"-n, --new\", t(\"ui.newHint\"))\n  .option(\n    \"--mcp <spec>\",\n    t(\"ui.mcpSpecHint\"),\n    (value: string, previous: string[] = []) => [...previous, value],\n    [] as string[],\n  )\n  .option(\"--mcp-prefix <str>\", t(\"ui.mcpPrefixHint\"))\n  .option(\"--no-config\", t(\"ui.noConfigHint\"))\n  .option(\"--no-dashboard\", t(\"ui.noDashboard\"))\n  .option(\"--no-alt-screen\", \"keep chat output in shell scrollback (legacy mode, ghost-prone)\")\n  .action(async (opts) => {\n    const defaults = resolveDefaults({\n      model: opts.model,\n      mcp: opts.mcp as string[],\n      session: opts.session,\n      preset: opts.preset,\n      noConfig: opts.config === false,\n    });\n    // `-c` is \"newest-touched session\" + auto-resume; `-r` is \"this\n    // session's prior messages, even if you also passed --session\".\n    // When both are set we prefer the explicit `--session` + `-r`\n    // (more specific input wins). `-c` only kicks in if `-r` wasn't.\n    const continueOpts = opts.resume\n      ? { session: defaults.session, forceResume: true }\n      : resolveContinueFlag(\n          opts.continue,\n          defaults.session,\n          () => listSessions()[0],\n          (msg) => process.stderr.write(`${msg}\\n`),\n        );\n    const { chatCommand } = await import(\"./commands/chat.js\");\n    await chatCommand({\n      model: defaults.model,\n      system: applyMemoryStack(opts.system, process.cwd()),\n      transcript: opts.transcript,\n      budgetUsd: parseBudgetFlag(opts.budget),\n      session: continueOpts.session,\n      mcp: defaults.mcp,\n      mcpPrefix: opts.mcpPrefix,\n      forceResume: continueOpts.forceResume,\n      forceNew: !!opts.new,\n      noDashboard: opts.dashboard === false,\n      altScreen: opts.altScreen !== false,\n    });\n  });\n\nprogram\n  .command(\"run <task>\")\n  .description(t(\"cli.run\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelIdHint\"))\n  .option(\"-s, --system <prompt>\", t(\"ui.systemPromptHint\"), DEFAULT_SYSTEM)\n  .option(\"--preset <name>\", t(\"ui.presetHintShort\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHintShort\"), (v) => Number.parseFloat(v))\n  .option(\"--transcript <path>\", t(\"ui.transcriptHintShort\"))\n  .option(\n    \"--mcp <spec>\",\n    t(\"ui.mcpSpecHintShort\"),\n    (value: string, previous: string[] = []) => [...previous, value],\n    [] as string[],\n  )\n  .option(\"--mcp-prefix <str>\", t(\"ui.mcpPrefixHintShort\"))\n  .option(\"--no-config\", t(\"ui.noConfigHint\"))\n  .action(async (task: string, opts) => {\n    const defaults = resolveDefaults({\n      model: opts.model,\n      mcp: opts.mcp as string[],\n      preset: opts.preset,\n      noConfig: opts.config === false,\n    });\n    const { runCommand } = await import(\"./commands/run.js\");\n    await runCommand({\n      task,\n      model: defaults.model,\n      system: applyMemoryStack(opts.system, process.cwd()),\n      budgetUsd: parseBudgetFlag(opts.budget),\n      transcript: opts.transcript,\n      mcp: defaults.mcp,\n      mcpPrefix: opts.mcpPrefix,\n    });\n  });\n\nprogram\n  .command(\"stats [transcript]\")\n  .description(t(\"cli.stats\"))\n  .action(async (transcript: string | undefined) => {\n    const { statsCommand } = await import(\"./commands/stats.js\");\n    statsCommand({ transcript });\n  });\n\nprogram\n  .command(\"doctor\")\n  .description(t(\"cli.doctor\"))\n  .action(async () => {\n    const { doctorCommand } = await import(\"./commands/doctor.js\");\n    await doctorCommand();\n  });\n\nprogram\n  .command(\"commit\")\n  .description(t(\"cli.commit\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelOverrideFlash\"))\n  .option(\"-y, --yes\", t(\"ui.skipConfirmHint\"))\n  .action(async (opts) => {\n    const { commitCommand } = await import(\"./commands/commit.js\");\n    await commitCommand({ model: opts.model, yes: !!opts.yes });\n  });\n\nprogram\n  .command(\"sessions [name]\")\n  .description(t(\"cli.sessions\"))\n  .option(\"-v, --verbose\", t(\"ui.verboseHint\"))\n  .action(async (name: string | undefined, opts) => {\n    const { sessionsCommand } = await import(\"./commands/sessions.js\");\n    sessionsCommand({ name, verbose: !!opts.verbose });\n  });\n\nprogram\n  .command(\"prune-sessions\")\n  .description(t(\"cli.pruneSessions\"))\n  .option(\"--days <n>\", t(\"ui.pruneDaysHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--dry-run\", t(\"ui.pruneDryRunHint\"))\n  .action(async (opts) => {\n    const { pruneSessionsCommand } = await import(\"./commands/prune-sessions.js\");\n    pruneSessionsCommand({ days: opts.days, dryRun: !!opts.dryRun });\n  });\n\nprogram\n  .command(\"events <name>\")\n  .description(t(\"cli.events\"))\n  .option(\"--type <type>\", t(\"ui.eventTypeHint\"))\n  .option(\"--since <id>\", t(\"ui.eventSinceHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--tail <n>\", t(\"ui.eventTailHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--json\", t(\"ui.jsonHint\"))\n  .option(\"--projection\", t(\"ui.projectionHint\"))\n  .action(async (name: string, opts) => {\n    const { eventsCommand } = await import(\"./commands/events.js\");\n    eventsCommand({\n      name,\n      type: opts.type,\n      since: Number.isFinite(opts.since) ? opts.since : undefined,\n      tail: Number.isFinite(opts.tail) ? opts.tail : undefined,\n      json: !!opts.json,\n      projection: !!opts.projection,\n    });\n  });\n\nprogram\n  .command(\"replay <transcript>\")\n  .description(t(\"cli.replay\"))\n  .option(\"--print\", t(\"ui.printHint\"))\n  .option(\"--head <n>\", t(\"ui.headHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--tail <n>\", t(\"ui.tailHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (transcript: string, opts) => {\n    const { replayCommand } = await import(\"./commands/replay.js\");\n    await replayCommand({\n      path: transcript,\n      print: !!opts.print,\n      head: Number.isFinite(opts.head) ? opts.head : undefined,\n      tail: Number.isFinite(opts.tail) ? opts.tail : undefined,\n    });\n  });\n\nprogram\n  .command(\"diff <a> <b>\")\n  .description(t(\"cli.diff\"))\n  .option(\"--md <path>\", t(\"ui.mdReportHint\"))\n  .option(\"--print\", t(\"ui.printHintTable\"))\n  .option(\"--tui\", t(\"ui.tuiHint\"))\n  .option(\"--label-a <label>\", t(\"ui.labelAHint\"))\n  .option(\"--label-b <label>\", t(\"ui.labelBHint\"))\n  .action(async (a: string, b: string, opts) => {\n    const { diffCommand } = await import(\"./commands/diff.js\");\n    await diffCommand({\n      a,\n      b,\n      mdPath: opts.md,\n      labelA: opts.labelA,\n      labelB: opts.labelB,\n      print: !!opts.print,\n      tui: !!opts.tui,\n    });\n  });\n\nconst mcp = program.command(\"mcp\").description(t(\"cli.mcp\"));\n\nmcp\n  .command(\"list\")\n  .description(t(\"ui.mcpListDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintCatalog\"))\n  .option(\"--local\", t(\"ui.mcpLocalHint\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--limit <n>\", t(\"ui.mcpLimitHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--pages <n>\", t(\"ui.mcpPagesHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--all\", t(\"ui.mcpAllHint\"))\n  .action(async (opts) => {\n    try {\n      const { mcpListCommand } = await import(\"./commands/mcp.js\");\n      await mcpListCommand({\n        json: !!opts.json,\n        local: !!opts.local,\n        refresh: !!opts.refresh,\n        limit: typeof opts.limit === \"number\" && opts.limit > 0 ? opts.limit : undefined,\n        pages: typeof opts.pages === \"number\" && opts.pages > 0 ? opts.pages : undefined,\n        all: !!opts.all,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp list failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"search <query>\")\n  .description(t(\"ui.mcpSearchDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintCatalog\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--limit <n>\", t(\"ui.mcpLimitHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--max-pages <n>\", t(\"ui.mcpMaxPagesHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (query: string, opts) => {\n    try {\n      const { mcpSearchCommand } = await import(\"./commands/mcp.js\");\n      await mcpSearchCommand(query, {\n        json: !!opts.json,\n        refresh: !!opts.refresh,\n        limit: typeof opts.limit === \"number\" && opts.limit > 0 ? opts.limit : undefined,\n        maxPages:\n          typeof opts.maxPages === \"number\" && opts.maxPages > 0 ? opts.maxPages : undefined,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp search failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"install <name>\")\n  .description(t(\"ui.mcpInstallDescription\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--max-pages <n>\", t(\"ui.mcpMaxPagesHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (name: string, opts) => {\n    try {\n      const { mcpInstallCommand } = await import(\"./commands/mcp.js\");\n      await mcpInstallCommand(name, {\n        refresh: !!opts.refresh,\n        maxPages:\n          typeof opts.maxPages === \"number\" && opts.maxPages > 0 ? opts.maxPages : undefined,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp install failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"browse\")\n  .description(t(\"ui.mcpBrowseDescription\"))\n  .action(async () => {\n    try {\n      const { mcpBrowseCommand } = await import(\"./commands/mcp-browse.js\");\n      await mcpBrowseCommand();\n    } catch (err) {\n      process.stderr.write(`mcp browse failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"inspect <spec>\")\n  .description(t(\"ui.mcpInspectDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintReport\"))\n  .action(async (spec: string, opts) => {\n    const { formatMcpInspectFailure, mcpInspectCommand } = await import(\n      \"./commands/mcp-inspect.js\"\n    );\n    try {\n      await mcpInspectCommand({ spec, json: !!opts.json });\n    } catch (err) {\n      process.stderr.write(`mcp inspect failed: ${formatMcpInspectFailure(err)}\\n`);\n      process.exit(1);\n    }\n  });\n\nprogram\n  .command(\"version\")\n  .description(t(\"cli.version\"))\n  .action(async () => {\n    const { versionCommand } = await import(\"./commands/version.js\");\n    versionCommand();\n  });\n\nprogram\n  .command(\"update\")\n  .description(t(\"cli.update\"))\n  .option(\"--dry-run\", t(\"ui.dryRunHint\"))\n  .action(async (opts: { dryRun?: boolean }) => {\n    const { updateCommand } = await import(\"./commands/update.js\");\n    await updateCommand({ dryRun: !!opts.dryRun });\n  });\n\nprogram\n  .command(\"index\")\n  .description(t(\"cli.index\"))\n  .option(\"--rebuild\", t(\"ui.rebuildHint\"))\n  .option(\"--model <name>\", t(\"ui.embedModelHint\"))\n  .option(\"--dir <path>\", t(\"ui.projectDirHint\"))\n  .option(\"--ollama-url <url>\", t(\"ui.ollamaUrlHint\"))\n  .option(\"-y, --yes\", t(\"ui.skipPromptsHint\"))\n  .action(\n    async (opts: {\n      rebuild?: boolean;\n      model?: string;\n      dir?: string;\n      ollamaUrl?: string;\n      yes?: boolean;\n    }) => {\n      const { indexCommand } = await import(\"./commands/index.js\");\n      await indexCommand(opts);\n    },\n  );\n\nprogram.parseAsync(process.argv).catch((err) => {\n  console.error(err);\n  process.exit(1);\n});\n","/** Precedence: per-setting flag > --preset > config.preset > \"auto\" defaults. */\n\nimport { type PresetName, type ReasonixConfig, readConfig } from \"../config.js\";\nimport { resolvePreset } from \"./ui/presets.js\";\n\nexport interface ResolvedDefaults {\n  model: string;\n  reasoningEffort: \"high\" | \"max\";\n  mcp: string[];\n  session: string | undefined;\n}\n\nexport interface RawCliFlags {\n  model?: string;\n  mcp?: string[];\n  /** Commander's `--no-session` surfaces as `false`; `--session X` as a string. */\n  session?: string | false;\n  /** `--preset <name>`. */\n  preset?: string;\n  /** When true, ignore config entirely (power-user escape hatch). */\n  noConfig?: boolean;\n}\n\nexport function resolveDefaults(flags: RawCliFlags): ResolvedDefaults {\n  const cfg: ReasonixConfig = flags.noConfig ? {} : readConfig();\n  const preset = pickPreset(flags.preset, cfg.preset);\n  const presetSettings = resolvePreset(preset);\n\n  const model = flags.model ?? presetSettings.model;\n  const reasoningEffort = presetSettings.reasoningEffort;\n\n  // `--mcp` accumulator is [] when absent. Treat empty from flags as\n  // \"user didn't pass\" → fall through to config. Users who explicitly\n  // want zero MCP servers can pass `--no-config` or edit the file.\n  const mcp = flags.mcp && flags.mcp.length > 0 ? flags.mcp : (cfg.mcp ?? []);\n\n  const session = resolveSession(flags.session, cfg.session);\n\n  return { model, reasoningEffort, mcp, session };\n}\n\nfunction pickPreset(\n  flagPreset: string | undefined,\n  configPreset: PresetName | undefined,\n): PresetName {\n  if (flagPreset && isPresetName(flagPreset)) return flagPreset;\n  if (configPreset) return configPreset;\n  return \"auto\";\n}\n\nfunction isPresetName(s: string): s is PresetName {\n  return (\n    s === \"auto\" ||\n    s === \"flash\" ||\n    s === \"pro\" ||\n    // Legacy names — kept callable so old `--preset smart` invocations\n    // and stale config.json entries don't error out.\n    s === \"fast\" ||\n    s === \"smart\" ||\n    s === \"max\"\n  );\n}\n\nfunction resolveSession(\n  flag: string | false | undefined,\n  configSession: string | null | undefined,\n): string | undefined {\n  if (flag === false) return undefined; // --no-session\n  if (typeof flag === \"string\" && flag.length > 0) return flag;\n  if (configSession === null) return undefined; // config opted out\n  if (typeof configSession === \"string\" && configSession.length > 0) return configSession;\n  return \"default\";\n}\n\nexport function resolveContinueFlag(\n  flag: boolean | undefined,\n  fallbackSession: string | undefined,\n  getLatestSession: () => { name: string } | undefined,\n  warn: (msg: string) => void = () => {},\n): { session: string | undefined; forceResume: boolean } {\n  if (!flag) return { session: fallbackSession, forceResume: false };\n  const latest = getLatestSession();\n  if (!latest) {\n    warn(\"▸ -c/--continue: no saved sessions yet — starting a fresh one.\");\n    return { session: fallbackSession, forceResume: false };\n  }\n  return { session: latest.name, forceResume: true 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+{"version":3,"sources":["../../src/cli/index.ts","../../src/cli/resolve.ts"],"sourcesContent":["import { Command } from \"commander\";\nimport { readConfig } from \"../config.js\";\nimport { t } from \"../i18n/index.js\";\nimport { VERSION } from \"../index.js\";\nimport { listSessions } from \"../memory/session.js\";\nimport { applyMemoryStack } from \"../memory/user.js\";\nimport { ESCALATION_CONTRACT } from \"../prompt-fragments.js\";\nimport { resolveContinueFlag, resolveDefaults } from \"./resolve.js\";\nimport { markPhase } from \"./startup-profile.js\";\n\nmarkPhase(\"cli_module_loaded\");\n\nconst DEFAULT_SYSTEM = `You are Reasonix, a helpful DeepSeek-powered assistant. Be concise and accurate. Use tools when available.\n\n# Cite or shut up — non-negotiable\n\nEvery factual claim about a codebase must be backed by evidence. Reasonix VALIDATES your citations — broken paths render in **red strikethrough with ❌** in front of the user.\n\n**Positive claims** — append a markdown link:\n- ✅ \\`The MCP client supports listResources [listResources](src/mcp/client.ts:142).\\`\n- ❌ \\`The MCP client supports listResources.\\` ← unverifiable, do not write.\n\n**Negative claims** (\"X is missing\", \"Y isn't implemented\", \"lacks Z\") are the #1 hallucination shape. STOP before writing them. If you have a search tool, call it first; if the search returns nothing, cite the search itself as evidence (\\`No matches for \"foo\" in src/\\`). If you have no tool, qualify hard: \"I haven't verified — this is a guess.\"\n\nAsserting absence without checking is how evaluative answers go wrong. Treat the urge to write \"missing\" as a red flag in your own reasoning.\n\n# Don't invent what changes — search instead\n\nYour training data has a cutoff. When an answer's correctness depends on something that changes over time (the user is asking what's happening, not what's true) and a search tool is available, search first. Inventing currently-correct values from training memory is the most common way these answers go wrong, and the user usually can't tell until much later.\n\nThe signal isn't a topic list — it's: \"if I'm wrong about this, is it because reality moved on?\". If yes, ground the answer in fresh evidence; if no (definitions, mechanisms, well-established APIs), answer from memory.\n\n${ESCALATION_CONTRACT}`;\n\n/** Lenient: malformed → undefined (no cap) so a bad flag doesn't abort launch. */\nfunction parseBudgetFlag(raw: number | undefined): number | undefined {\n  if (raw === undefined) return undefined;\n  if (!Number.isFinite(raw) || raw <= 0) {\n    process.stderr.write(\n      `▲ ignoring --budget=${raw} (must be a positive number) — running with no cap\\n`,\n    );\n    return undefined;\n  }\n  return raw;\n}\n\nconst program = new Command();\nprogram\n  .name(\"reasonix\")\n  .description(t(\"cli.description\"))\n  .version(VERSION)\n  .option(\"-c, --continue\", t(\"cli.continue\"));\n\n// `reasonix` with no subcommand → launch the friendliest flow.\n// First run (no config yet) → interactive setup wizard.\n// Otherwise → chat with saved defaults. This is the \"one command to\n// rule them all\" entry for non-power-users: they don't need to learn\n// `chat` / `setup` / `--mcp` — just type `reasonix`.\nprogram.action(async (opts: { continue?: boolean }) => {\n  const cfg = readConfig();\n  if (!cfg.setupCompleted) {\n    const { setupCommand } = await import(\"./commands/setup.js\");\n    await setupCommand({});\n    return;\n  }\n  const defaults = resolveDefaults({});\n  const continueOpts = resolveContinueFlag(\n    opts.continue,\n    defaults.session,\n    () => listSessions()[0],\n    (msg) => process.stderr.write(`${msg}\\n`),\n  );\n  const { chatCommand } = await import(\"./commands/chat.js\");\n  await chatCommand({\n    model: defaults.model,\n    system: applyMemoryStack(DEFAULT_SYSTEM, process.cwd()),\n    session: continueOpts.session,\n    mcp: defaults.mcp,\n    forceResume: continueOpts.forceResume,\n  });\n});\n\nprogram\n  .command(\"setup\")\n  .description(t(\"cli.setup\"))\n  .action(async () => {\n    const { setupCommand } = await import(\"./commands/setup.js\");\n    await setupCommand({});\n  });\n\nprogram\n  .command(\"code [dir]\")\n  .description(t(\"cli.code\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelOverride\"))\n  .option(\"--no-session\", t(\"ui.noSession\"))\n  .option(\"-r, --resume\", t(\"ui.resumeHint\"))\n  .option(\"-n, --new\", t(\"ui.newHint\"))\n  .option(\"--transcript <path>\", t(\"ui.transcriptHint\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHint\"), (v) => Number.parseFloat(v))\n  .option(\"--no-dashboard\", t(\"ui.noDashboard\"))\n  .option(\"--no-alt-screen\", \"keep chat output in shell scrollback (legacy mode, ghost-prone)\")\n  .option(\"--system-append <prompt>\", t(\"ui.systemAppendHint\"))\n  .option(\"--system-append-file <path>\", t(\"ui.systemAppendFileHint\"))\n  .action(async (dir: string | undefined, opts) => {\n    const { codeCommand } = await import(\"./commands/code.js\");\n    await codeCommand({\n      dir,\n      model: opts.model,\n      noSession: opts.session === false,\n      transcript: opts.transcript,\n      forceResume: !!opts.resume,\n      forceNew: !!opts.new,\n      budgetUsd: parseBudgetFlag(opts.budget),\n      noDashboard: opts.dashboard === false,\n      systemAppend: opts.systemAppend,\n      systemAppendFile: opts.systemAppendFile,\n      altScreen: opts.altScreen !== false,\n    });\n  });\n\nprogram\n  .command(\"chat\")\n  .description(t(\"cli.chat\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelIdHint\"))\n  .option(\"-s, --system <prompt>\", t(\"ui.systemPromptHint\"), DEFAULT_SYSTEM)\n  .option(\"--transcript <path>\", t(\"ui.transcriptHint\"))\n  .option(\"--preset <name>\", t(\"ui.presetHint\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHint\"), (v) => Number.parseFloat(v))\n  .option(\"--session <name>\", t(\"ui.sessionNameHint\"))\n  .option(\"--no-session\", t(\"ui.ephemeralHint\"))\n  .option(\"-r, --resume\", t(\"ui.resumeHint\"))\n  .option(\"-c, --continue\", t(\"cli.continue\"))\n  .option(\"-n, --new\", t(\"ui.newHint\"))\n  .option(\n    \"--mcp <spec>\",\n    t(\"ui.mcpSpecHint\"),\n    (value: string, previous: string[] = []) => [...previous, value],\n    [] as string[],\n  )\n  .option(\"--mcp-prefix <str>\", t(\"ui.mcpPrefixHint\"))\n  .option(\"--no-config\", t(\"ui.noConfigHint\"))\n  .option(\"--no-dashboard\", t(\"ui.noDashboard\"))\n  .option(\"--no-alt-screen\", \"keep chat output in shell scrollback (legacy mode, ghost-prone)\")\n  .action(async (opts) => {\n    const defaults = resolveDefaults({\n      model: opts.model,\n      mcp: opts.mcp as string[],\n      session: opts.session,\n      preset: opts.preset,\n      noConfig: opts.config === false,\n    });\n    // `-c` is \"newest-touched session\" + auto-resume; `-r` is \"this\n    // session's prior messages, even if you also passed --session\".\n    // When both are set we prefer the explicit `--session` + `-r`\n    // (more specific input wins). `-c` only kicks in if `-r` wasn't.\n    const continueOpts = opts.resume\n      ? { session: defaults.session, forceResume: true }\n      : resolveContinueFlag(\n          opts.continue,\n          defaults.session,\n          () => listSessions()[0],\n          (msg) => process.stderr.write(`${msg}\\n`),\n        );\n    const { chatCommand } = await import(\"./commands/chat.js\");\n    await chatCommand({\n      model: defaults.model,\n      system: applyMemoryStack(opts.system, process.cwd()),\n      transcript: opts.transcript,\n      budgetUsd: parseBudgetFlag(opts.budget),\n      session: continueOpts.session,\n      mcp: defaults.mcp,\n      mcpPrefix: opts.mcpPrefix,\n      forceResume: continueOpts.forceResume,\n      forceNew: !!opts.new,\n      noDashboard: opts.dashboard === false,\n      altScreen: opts.altScreen !== false,\n    });\n  });\n\nprogram\n  .command(\"run <task>\")\n  .description(t(\"cli.run\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelIdHint\"))\n  .option(\"-s, --system <prompt>\", t(\"ui.systemPromptHint\"), DEFAULT_SYSTEM)\n  .option(\"--preset <name>\", t(\"ui.presetHintShort\"))\n  .option(\"--budget <usd>\", t(\"ui.budgetHintShort\"), (v) => Number.parseFloat(v))\n  .option(\"--transcript <path>\", t(\"ui.transcriptHintShort\"))\n  .option(\n    \"--mcp <spec>\",\n    t(\"ui.mcpSpecHintShort\"),\n    (value: string, previous: string[] = []) => [...previous, value],\n    [] as string[],\n  )\n  .option(\"--mcp-prefix <str>\", t(\"ui.mcpPrefixHintShort\"))\n  .option(\"--no-config\", t(\"ui.noConfigHint\"))\n  .action(async (task: string, opts) => {\n    const defaults = resolveDefaults({\n      model: opts.model,\n      mcp: opts.mcp as string[],\n      preset: opts.preset,\n      noConfig: opts.config === false,\n    });\n    const { runCommand } = await import(\"./commands/run.js\");\n    await runCommand({\n      task,\n      model: defaults.model,\n      system: applyMemoryStack(opts.system, process.cwd()),\n      budgetUsd: parseBudgetFlag(opts.budget),\n      transcript: opts.transcript,\n      mcp: defaults.mcp,\n      mcpPrefix: opts.mcpPrefix,\n    });\n  });\n\nprogram\n  .command(\"stats [transcript]\")\n  .description(t(\"cli.stats\"))\n  .action(async (transcript: string | undefined) => {\n    const { statsCommand } = await import(\"./commands/stats.js\");\n    statsCommand({ transcript });\n  });\n\nprogram\n  .command(\"doctor\")\n  .description(t(\"cli.doctor\"))\n  .action(async () => {\n    const { doctorCommand } = await import(\"./commands/doctor.js\");\n    await doctorCommand();\n  });\n\nprogram\n  .command(\"commit\")\n  .description(t(\"cli.commit\"))\n  .option(\"-m, --model <id>\", t(\"ui.modelOverrideFlash\"))\n  .option(\"-y, --yes\", t(\"ui.skipConfirmHint\"))\n  .action(async (opts) => {\n    const { commitCommand } = await import(\"./commands/commit.js\");\n    await commitCommand({ model: opts.model, yes: !!opts.yes });\n  });\n\nprogram\n  .command(\"sessions [name]\")\n  .description(t(\"cli.sessions\"))\n  .option(\"-v, --verbose\", t(\"ui.verboseHint\"))\n  .action(async (name: string | undefined, opts) => {\n    const { sessionsCommand } = await import(\"./commands/sessions.js\");\n    sessionsCommand({ name, verbose: !!opts.verbose });\n  });\n\nprogram\n  .command(\"prune-sessions\")\n  .description(t(\"cli.pruneSessions\"))\n  .option(\"--days <n>\", t(\"ui.pruneDaysHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--dry-run\", t(\"ui.pruneDryRunHint\"))\n  .action(async (opts) => {\n    const { pruneSessionsCommand } = await import(\"./commands/prune-sessions.js\");\n    pruneSessionsCommand({ days: opts.days, dryRun: !!opts.dryRun });\n  });\n\nprogram\n  .command(\"events <name>\")\n  .description(t(\"cli.events\"))\n  .option(\"--type <type>\", t(\"ui.eventTypeHint\"))\n  .option(\"--since <id>\", t(\"ui.eventSinceHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--tail <n>\", t(\"ui.eventTailHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--json\", t(\"ui.jsonHint\"))\n  .option(\"--projection\", t(\"ui.projectionHint\"))\n  .action(async (name: string, opts) => {\n    const { eventsCommand } = await import(\"./commands/events.js\");\n    eventsCommand({\n      name,\n      type: opts.type,\n      since: Number.isFinite(opts.since) ? opts.since : undefined,\n      tail: Number.isFinite(opts.tail) ? opts.tail : undefined,\n      json: !!opts.json,\n      projection: !!opts.projection,\n    });\n  });\n\nprogram\n  .command(\"replay <transcript>\")\n  .description(t(\"cli.replay\"))\n  .option(\"--print\", t(\"ui.printHint\"))\n  .option(\"--head <n>\", t(\"ui.headHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--tail <n>\", t(\"ui.tailHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (transcript: string, opts) => {\n    const { replayCommand } = await import(\"./commands/replay.js\");\n    await replayCommand({\n      path: transcript,\n      print: !!opts.print,\n      head: Number.isFinite(opts.head) ? opts.head : undefined,\n      tail: Number.isFinite(opts.tail) ? opts.tail : undefined,\n    });\n  });\n\nprogram\n  .command(\"diff <a> <b>\")\n  .description(t(\"cli.diff\"))\n  .option(\"--md <path>\", t(\"ui.mdReportHint\"))\n  .option(\"--print\", t(\"ui.printHintTable\"))\n  .option(\"--tui\", t(\"ui.tuiHint\"))\n  .option(\"--label-a <label>\", t(\"ui.labelAHint\"))\n  .option(\"--label-b <label>\", t(\"ui.labelBHint\"))\n  .action(async (a: string, b: string, opts) => {\n    const { diffCommand } = await import(\"./commands/diff.js\");\n    await diffCommand({\n      a,\n      b,\n      mdPath: opts.md,\n      labelA: opts.labelA,\n      labelB: opts.labelB,\n      print: !!opts.print,\n      tui: !!opts.tui,\n    });\n  });\n\nconst mcp = program.command(\"mcp\").description(t(\"cli.mcp\"));\n\nmcp\n  .command(\"list\")\n  .description(t(\"ui.mcpListDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintCatalog\"))\n  .option(\"--local\", t(\"ui.mcpLocalHint\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--limit <n>\", t(\"ui.mcpLimitHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--pages <n>\", t(\"ui.mcpPagesHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--all\", t(\"ui.mcpAllHint\"))\n  .action(async (opts) => {\n    try {\n      const { mcpListCommand } = await import(\"./commands/mcp.js\");\n      await mcpListCommand({\n        json: !!opts.json,\n        local: !!opts.local,\n        refresh: !!opts.refresh,\n        limit: typeof opts.limit === \"number\" && opts.limit > 0 ? opts.limit : undefined,\n        pages: typeof opts.pages === \"number\" && opts.pages > 0 ? opts.pages : undefined,\n        all: !!opts.all,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp list failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"search <query>\")\n  .description(t(\"ui.mcpSearchDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintCatalog\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--limit <n>\", t(\"ui.mcpLimitHint\"), (v) => Number.parseInt(v, 10))\n  .option(\"--max-pages <n>\", t(\"ui.mcpMaxPagesHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (query: string, opts) => {\n    try {\n      const { mcpSearchCommand } = await import(\"./commands/mcp.js\");\n      await mcpSearchCommand(query, {\n        json: !!opts.json,\n        refresh: !!opts.refresh,\n        limit: typeof opts.limit === \"number\" && opts.limit > 0 ? opts.limit : undefined,\n        maxPages:\n          typeof opts.maxPages === \"number\" && opts.maxPages > 0 ? opts.maxPages : undefined,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp search failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"install <name>\")\n  .description(t(\"ui.mcpInstallDescription\"))\n  .option(\"--refresh\", t(\"ui.mcpRefreshHint\"))\n  .option(\"--max-pages <n>\", t(\"ui.mcpMaxPagesHint\"), (v) => Number.parseInt(v, 10))\n  .action(async (name: string, opts) => {\n    try {\n      const { mcpInstallCommand } = await import(\"./commands/mcp.js\");\n      await mcpInstallCommand(name, {\n        refresh: !!opts.refresh,\n        maxPages:\n          typeof opts.maxPages === \"number\" && opts.maxPages > 0 ? opts.maxPages : undefined,\n      });\n    } catch (err) {\n      process.stderr.write(`mcp install failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"browse\")\n  .description(t(\"ui.mcpBrowseDescription\"))\n  .action(async () => {\n    try {\n      const { mcpBrowseCommand } = await import(\"./commands/mcp-browse.js\");\n      await mcpBrowseCommand();\n    } catch (err) {\n      process.stderr.write(`mcp browse failed: ${(err as Error).message}\\n`);\n      process.exit(1);\n    }\n  });\n\nmcp\n  .command(\"inspect <spec>\")\n  .description(t(\"ui.mcpInspectDescription\"))\n  .option(\"--json\", t(\"ui.jsonHintReport\"))\n  .action(async (spec: string, opts) => {\n    const { formatMcpInspectFailure, mcpInspectCommand } = await import(\n      \"./commands/mcp-inspect.js\"\n    );\n    try {\n      await mcpInspectCommand({ spec, json: !!opts.json });\n    } catch (err) {\n      process.stderr.write(`mcp inspect failed: ${formatMcpInspectFailure(err)}\\n`);\n      process.exit(1);\n    }\n  });\n\nprogram\n  .command(\"version\")\n  .description(t(\"cli.version\"))\n  .action(async () => {\n    const { versionCommand } = await import(\"./commands/version.js\");\n    versionCommand();\n  });\n\nprogram\n  .command(\"update\")\n  .description(t(\"cli.update\"))\n  .option(\"--dry-run\", t(\"ui.dryRunHint\"))\n  .action(async (opts: { dryRun?: boolean }) => {\n    const { updateCommand } = await import(\"./commands/update.js\");\n    await updateCommand({ dryRun: !!opts.dryRun });\n  });\n\nprogram\n  .command(\"index\")\n  .description(t(\"cli.index\"))\n  .option(\"--rebuild\", t(\"ui.rebuildHint\"))\n  .option(\"--model <name>\", t(\"ui.embedModelHint\"))\n  .option(\"--dir <path>\", t(\"ui.projectDirHint\"))\n  .option(\"--ollama-url <url>\", t(\"ui.ollamaUrlHint\"))\n  .option(\"-y, --yes\", t(\"ui.skipPromptsHint\"))\n  .action(\n    async (opts: {\n      rebuild?: boolean;\n      model?: string;\n      dir?: string;\n      ollamaUrl?: string;\n      yes?: boolean;\n    }) => {\n      const { indexCommand } = await import(\"./commands/index.js\");\n      await indexCommand(opts);\n    },\n  );\n\nprogram.parseAsync(process.argv).catch((err) => {\n  console.error(err);\n  process.exit(1);\n});\n","/** Precedence: per-setting flag > --preset > config.preset > \"auto\" defaults. */\n\nimport { type PresetName, type ReasonixConfig, readConfig } from \"../config.js\";\nimport { resolvePreset } from \"./ui/presets.js\";\n\nexport interface ResolvedDefaults {\n  model: string;\n  reasoningEffort: \"high\" | \"max\";\n  mcp: string[];\n  session: string | undefined;\n}\n\nexport interface RawCliFlags {\n  model?: string;\n  mcp?: string[];\n  /** Commander's `--no-session` surfaces as `false`; `--session X` as a string. */\n  session?: string | false;\n  /** `--preset <name>`. */\n  preset?: string;\n  /** When true, ignore config entirely (power-user escape hatch). */\n  noConfig?: boolean;\n}\n\nexport function resolveDefaults(flags: RawCliFlags): ResolvedDefaults {\n  const cfg: ReasonixConfig = flags.noConfig ? {} : readConfig();\n  const preset = pickPreset(flags.preset, cfg.preset);\n  const presetSettings = resolvePreset(preset);\n\n  const model = flags.model ?? presetSettings.model;\n  const reasoningEffort = presetSettings.reasoningEffort;\n\n  // `--mcp` accumulator is [] when absent. Treat empty from flags as\n  // \"user didn't pass\" → fall through to config. Users who explicitly\n  // want zero MCP servers can pass `--no-config` or edit the file.\n  const mcp = flags.mcp && flags.mcp.length > 0 ? flags.mcp : (cfg.mcp ?? []);\n\n  const session = resolveSession(flags.session, cfg.session);\n\n  return { model, reasoningEffort, mcp, session };\n}\n\nfunction pickPreset(\n  flagPreset: string | undefined,\n  configPreset: PresetName | undefined,\n): PresetName {\n  if (flagPreset && isPresetName(flagPreset)) return flagPreset;\n  if (configPreset) return configPreset;\n  return \"auto\";\n}\n\nfunction isPresetName(s: string): s is PresetName {\n  return (\n    s === \"auto\" ||\n    s === \"flash\" ||\n    s === \"pro\" ||\n    // Legacy names — kept callable so old `--preset smart` invocations\n    // and stale config.json entries don't error out.\n    s === \"fast\" ||\n    s === \"smart\" ||\n    s === \"max\"\n  );\n}\n\nfunction resolveSession(\n  flag: string | false | undefined,\n  configSession: string | null | undefined,\n): string | undefined {\n  if (flag === false) return undefined; // --no-session\n  if (typeof flag === \"string\" && flag.length > 0) return flag;\n  if (configSession === null) return undefined; // config opted out\n  if (typeof configSession === \"string\" && configSession.length > 0) return configSession;\n  return \"default\";\n}\n\nexport function resolveContinueFlag(\n  flag: boolean | undefined,\n  fallbackSession: string | undefined,\n  getLatestSession: () => { name: string } | undefined,\n  warn: (msg: string) => void = () => {},\n): { session: string | undefined; forceResume: boolean } {\n  if (!flag) return { session: fallbackSession, forceResume: false };\n  const latest = getLatestSession();\n  if (!latest) {\n    warn(\"▸ -c/--continue: no saved sessions yet — starting a fresh one.\");\n    return { session: fallbackSession, forceResume: false };\n  }\n  return { session: latest.name, forceResume: true 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package/dist/cli/{replay-TMJASRC4.js → replay-Q43DSMG6.js}

@@ -7,7 +7,7 @@ import {
   ChromeRule,
   formatBalance,
   formatCost
-} from "./chunk-Q5GRLZJF.js";
+} from "./chunk-63KAV5DX.js";
 import {
   computeCumulativeStats,
   groupRecordsByTurn,
@@ -270,4 +270,4 @@ function oneLine(s, max = 200) {
 export {
   replayCommand
 };
-//# sourceMappingURL=replay-TMJASRC4.js.map
+//# sourceMappingURL=replay-Q43DSMG6.js.map

package/dist/cli/{run-JMEOTQCG.js → run-HK3FP266.js}

@@ -11,7 +11,7 @@ import {
   ImmutablePrefix,
   ToolRegistry,
   bridgeMcpTools
-} from "./chunk-Q6YFXW7H.js";
+} from "./chunk-G7M3QWEN.js";
 import {
   McpClient,
   SseTransport,
@@ -26,6 +26,7 @@ import {
   writeRecord
 } from "./chunk-XHQIK7B6.js";
 import "./chunk-6TMHAK5D.js";
+import "./chunk-DAEAAVDF.js";
 import {
   DeepSeekClient
 } from "./chunk-KMWKGPFZ.js";
@@ -212,4 +213,4 @@ transcript: ${opts.transcript}
 export {
   runCommand
 };
-//# sourceMappingURL=run-JMEOTQCG.js.map
+//# sourceMappingURL=run-HK3FP266.js.map

package/dist/cli/{run-JMEOTQCG.js.map → run-HK3FP266.js.map}

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/commands/run.ts"],"sourcesContent":["import type { WriteStream } from \"node:fs\";\nimport { stdin, stdout } from \"node:process\";\nimport { createInterface } from \"node:readline/promises\";\nimport {\n  defaultConfigPath,\n  isPlausibleKey,\n  loadApiKey,\n  readConfig,\n  saveApiKey,\n} from \"../../config.js\";\nimport { loadDotenv } from \"../../env.js\";\nimport { CacheFirstLoop, DeepSeekClient, ImmutablePrefix } from \"../../index.js\";\nimport { McpClient } from \"../../mcp/client.js\";\nimport { preflightStdioSpec } from \"../../mcp/preflight.js\";\nimport { bridgeMcpTools } from \"../../mcp/registry.js\";\nimport { parseMcpSpec } from \"../../mcp/spec.js\";\nimport { SseTransport } from \"../../mcp/sse.js\";\nimport { type McpTransport, StdioTransport } from \"../../mcp/stdio.js\";\nimport { StreamableHttpTransport } from \"../../mcp/streamable-http.js\";\nimport { appendUsage } from \"../../telemetry/usage.js\";\nimport { ToolRegistry } from \"../../tools.js\";\nimport { openTranscriptFile, recordFromLoopEvent, writeRecord } from \"../../transcript/log.js\";\nimport { formatMcpLifecycleEvent } from \"../ui/mcp-lifecycle.js\";\nimport { formatMcpSlowToast } from \"../ui/mcp-toast.js\";\n\nexport interface RunOptions {\n  task: string;\n  model: string;\n  system: string;\n  budgetUsd?: number;\n  /** JSONL transcript path — lets `reasonix replay` / `diff` audit this run. */\n  transcript?: string;\n  /** Zero or more MCP server specs. Each: `\"name=cmd args...\"` or `\"cmd args...\"`. */\n  mcp?: string[];\n  /** Global prefix — only honored when a single anonymous server is given. */\n  mcpPrefix?: string;\n}\n\nasync function ensureApiKey(): Promise<string> {\n  const existing = loadApiKey();\n  if (existing) return existing;\n\n  if (!stdin.isTTY) {\n    process.stderr.write(\n      \"DEEPSEEK_API_KEY is not set and stdin is not a TTY (cannot prompt).\\n\" +\n        \"Set the env var, or run `reasonix chat` once interactively to save a key.\\n\",\n    );\n    process.exit(1);\n  }\n\n  process.stdout.write(\n    \"DeepSeek API key not configured.\\nGet one at https://platform.deepseek.com/api_keys\\n\",\n  );\n  const rl = createInterface({ input: stdin, output: stdout });\n  try {\n    while (true) {\n      const answer = (await rl.question(\"API key › \")).trim();\n      if (!answer) continue;\n      if (!isPlausibleKey(answer)) {\n        process.stdout.write(\"Invalid format. Keys start with 'sk-' and are 30+ chars.\\n\");\n        continue;\n      }\n      saveApiKey(answer);\n      process.stdout.write(`Saved to ${defaultConfigPath()}\\n\\n`);\n      return answer;\n    }\n  } finally {\n    rl.close();\n  }\n}\n\nexport async function runCommand(opts: RunOptions): Promise<void> {\n  loadDotenv();\n  const apiKey = await ensureApiKey();\n  process.env.DEEPSEEK_API_KEY = apiKey;\n\n  // Optional MCP setup — mirrors chat's flow. Must happen before loop\n  // construction so the tools make it into the prefix.\n  const requestedSpecs = opts.mcp ?? [];\n  const clients: McpClient[] = [];\n  let tools: ToolRegistry | undefined;\n  let successCount = 0;\n  const disabledNames = new Set(readConfig().mcpDisabled ?? []);\n  if (requestedSpecs.length > 0) {\n    tools = new ToolRegistry();\n    for (const raw of requestedSpecs) {\n      let label = \"anon\";\n      let mcp: McpClient | undefined;\n      try {\n        const spec = parseMcpSpec(raw);\n        label = spec.name ?? \"anon\";\n        if (spec.name && disabledNames.has(spec.name)) {\n          process.stderr.write(`${formatMcpLifecycleEvent({ state: \"disabled\", name: label })}\\n`);\n          continue;\n        }\n        process.stderr.write(`${formatMcpLifecycleEvent({ state: \"handshake\", name: label })}\\n`);\n        const t0 = Date.now();\n        const prefix = spec.name\n          ? `${spec.name}_`\n          : requestedSpecs.length === 1 && opts.mcpPrefix\n            ? opts.mcpPrefix\n            : \"\";\n        if (spec.transport === \"stdio\") preflightStdioSpec(spec);\n        const transport: McpTransport =\n          spec.transport === \"sse\"\n            ? new SseTransport({ url: spec.url })\n            : spec.transport === \"streamable-http\"\n              ? new StreamableHttpTransport({ url: spec.url })\n              : new StdioTransport({ command: spec.command, args: spec.args });\n        mcp = new McpClient({ transport });\n        await mcp.initialize();\n        const bridge = await bridgeMcpTools(mcp, {\n          registry: tools,\n          namePrefix: prefix,\n          serverName: label,\n          onSlow: (info) =>\n            process.stderr.write(\n              `${formatMcpSlowToast({ name: info.serverName, p95Ms: info.p95Ms, sampleSize: info.sampleSize })}\\n`,\n            ),\n        });\n        process.stderr.write(\n          `${formatMcpLifecycleEvent({\n            state: \"connected\",\n            name: label,\n            tools: bridge.registeredNames.length,\n            ms: Date.now() - t0,\n          })}\\n`,\n        );\n        clients.push(mcp);\n        successCount++;\n      } catch (err) {\n        // Non-fatal — skip and continue, same as `reasonix chat`. A\n        // one-shot `run` invocation with a broken MCP server otherwise\n        // fails the whole run over a side-concern tool the task might\n        // not even touch.\n        await mcp?.close().catch(() => undefined);\n        process.stderr.write(\n          `${formatMcpLifecycleEvent({ state: \"failed\", name: label, reason: (err as Error).message })}\\n  → run \\`reasonix setup\\` to remove broken entries from your saved config.\\n`,\n        );\n      }\n    }\n    if (successCount === 0) tools = undefined;\n  }\n\n  const client = new DeepSeekClient();\n  const prefix = new ImmutablePrefix({\n    system: opts.system,\n    toolSpecs: tools?.specs(),\n  });\n  const loop = new CacheFirstLoop({\n    client,\n    prefix,\n    tools,\n    model: opts.model,\n    budgetUsd: opts.budgetUsd,\n  });\n  const prefixHash = prefix.fingerprint;\n\n  let transcriptStream: WriteStream | null = null;\n  if (opts.transcript) {\n    transcriptStream = openTranscriptFile(opts.transcript, {\n      version: 1,\n      source: \"reasonix run\",\n      model: opts.model,\n      startedAt: new Date().toISOString(),\n    });\n    // Also persist the user turn itself (the loop's event stream starts with\n    // assistant output, not the prompt we're about to send).\n    writeRecord(transcriptStream, {\n      ts: new Date().toISOString(),\n      turn: 1,\n      role: \"user\",\n      content: opts.task,\n    });\n  }\n\n  try {\n    for await (const ev of loop.step(opts.task)) {\n      if (ev.role === \"assistant_delta\" && ev.content) process.stdout.write(ev.content);\n      if (ev.role === \"tool\") process.stdout.write(`\\n[tool ${ev.toolName}] ${ev.content}\\n`);\n      if (ev.role === \"error\") process.stderr.write(`\\n[error] ${ev.error}\\n`);\n      if (ev.role === \"done\") process.stdout.write(\"\\n\");\n      if (ev.role === \"assistant_final\" && ev.stats?.usage) {\n        // `reasonix run` is often used in CI / scripting — we want\n        // those turns to show up in `reasonix stats` too so the\n        // dashboard reflects all DeepSeek spend, not just TUI sessions.\n        appendUsage({ session: null, model: ev.stats.model, usage: ev.stats.usage });\n      }\n      // Persist every non-streaming event — deltas would flood the file and\n      // aren't useful for replay (replay renders final content, not keystrokes).\n      if (transcriptStream && ev.role !== \"assistant_delta\") {\n        writeRecord(transcriptStream, recordFromLoopEvent(ev, { model: opts.model, prefixHash }));\n      }\n    }\n  } finally {\n    transcriptStream?.end();\n  }\n\n  const s = loop.stats.summary();\n  process.stdout.write(\n    `\\n— turns:${s.turns} cache:${(s.cacheHitRatio * 100).toFixed(1)}% ` +\n      `cost:$${s.totalCostUsd.toFixed(6)} save-vs-claude:${s.savingsVsClaudePct.toFixed(1)}%\\n`,\n  );\n  if (opts.transcript) {\n    process.stdout.write(`\\ntranscript: ${opts.transcript}\\n`);\n    process.stdout.write(`  → npx reasonix replay 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+{"version":3,"sources":["../../src/cli/commands/run.ts"],"sourcesContent":["import type { WriteStream } from \"node:fs\";\nimport { stdin, stdout } from \"node:process\";\nimport { createInterface } from \"node:readline/promises\";\nimport {\n  defaultConfigPath,\n  isPlausibleKey,\n  loadApiKey,\n  readConfig,\n  saveApiKey,\n} from \"../../config.js\";\nimport { loadDotenv } from \"../../env.js\";\nimport { CacheFirstLoop, DeepSeekClient, ImmutablePrefix } from \"../../index.js\";\nimport { McpClient } from \"../../mcp/client.js\";\nimport { preflightStdioSpec } from \"../../mcp/preflight.js\";\nimport { bridgeMcpTools } from \"../../mcp/registry.js\";\nimport { parseMcpSpec } from \"../../mcp/spec.js\";\nimport { SseTransport } from \"../../mcp/sse.js\";\nimport { type McpTransport, StdioTransport } from \"../../mcp/stdio.js\";\nimport { StreamableHttpTransport } from \"../../mcp/streamable-http.js\";\nimport { appendUsage } from \"../../telemetry/usage.js\";\nimport { ToolRegistry } from \"../../tools.js\";\nimport { openTranscriptFile, recordFromLoopEvent, writeRecord } from \"../../transcript/log.js\";\nimport { formatMcpLifecycleEvent } from \"../ui/mcp-lifecycle.js\";\nimport { formatMcpSlowToast } from \"../ui/mcp-toast.js\";\n\nexport interface RunOptions {\n  task: string;\n  model: string;\n  system: string;\n  budgetUsd?: number;\n  /** JSONL transcript path — lets `reasonix replay` / `diff` audit this run. */\n  transcript?: string;\n  /** Zero or more MCP server specs. Each: `\"name=cmd args...\"` or `\"cmd args...\"`. */\n  mcp?: string[];\n  /** Global prefix — only honored when a single anonymous server is given. */\n  mcpPrefix?: string;\n}\n\nasync function ensureApiKey(): Promise<string> {\n  const existing = loadApiKey();\n  if (existing) return existing;\n\n  if (!stdin.isTTY) {\n    process.stderr.write(\n      \"DEEPSEEK_API_KEY is not set and stdin is not a TTY (cannot prompt).\\n\" +\n        \"Set the env var, or run `reasonix chat` once interactively to save a key.\\n\",\n    );\n    process.exit(1);\n  }\n\n  process.stdout.write(\n    \"DeepSeek API key not configured.\\nGet one at https://platform.deepseek.com/api_keys\\n\",\n  );\n  const rl = createInterface({ input: stdin, output: stdout });\n  try {\n    while (true) {\n      const answer = (await rl.question(\"API key › \")).trim();\n      if (!answer) continue;\n      if (!isPlausibleKey(answer)) {\n        process.stdout.write(\"Invalid format. Keys start with 'sk-' and are 30+ chars.\\n\");\n        continue;\n      }\n      saveApiKey(answer);\n      process.stdout.write(`Saved to ${defaultConfigPath()}\\n\\n`);\n      return answer;\n    }\n  } finally {\n    rl.close();\n  }\n}\n\nexport async function runCommand(opts: RunOptions): Promise<void> {\n  loadDotenv();\n  const apiKey = await ensureApiKey();\n  process.env.DEEPSEEK_API_KEY = apiKey;\n\n  // Optional MCP setup — mirrors chat's flow. Must happen before loop\n  // construction so the tools make it into the prefix.\n  const requestedSpecs = opts.mcp ?? [];\n  const clients: McpClient[] = [];\n  let tools: ToolRegistry | undefined;\n  let successCount = 0;\n  const disabledNames = new Set(readConfig().mcpDisabled ?? []);\n  if (requestedSpecs.length > 0) {\n    tools = new ToolRegistry();\n    for (const raw of requestedSpecs) {\n      let label = \"anon\";\n      let mcp: McpClient | undefined;\n      try {\n        const spec = parseMcpSpec(raw);\n        label = spec.name ?? \"anon\";\n        if (spec.name && disabledNames.has(spec.name)) {\n          process.stderr.write(`${formatMcpLifecycleEvent({ state: \"disabled\", name: label })}\\n`);\n          continue;\n        }\n        process.stderr.write(`${formatMcpLifecycleEvent({ state: \"handshake\", name: label })}\\n`);\n        const t0 = Date.now();\n        const prefix = spec.name\n          ? `${spec.name}_`\n          : requestedSpecs.length === 1 && opts.mcpPrefix\n            ? opts.mcpPrefix\n            : \"\";\n        if (spec.transport === \"stdio\") preflightStdioSpec(spec);\n        const transport: McpTransport =\n          spec.transport === \"sse\"\n            ? new SseTransport({ url: spec.url })\n            : spec.transport === \"streamable-http\"\n              ? new StreamableHttpTransport({ url: spec.url })\n              : new StdioTransport({ command: spec.command, args: spec.args });\n        mcp = new McpClient({ transport });\n        await mcp.initialize();\n        const bridge = await bridgeMcpTools(mcp, {\n          registry: tools,\n          namePrefix: prefix,\n          serverName: label,\n          onSlow: (info) =>\n            process.stderr.write(\n              `${formatMcpSlowToast({ name: info.serverName, p95Ms: info.p95Ms, sampleSize: info.sampleSize })}\\n`,\n            ),\n        });\n        process.stderr.write(\n          `${formatMcpLifecycleEvent({\n            state: \"connected\",\n            name: label,\n            tools: bridge.registeredNames.length,\n            ms: Date.now() - t0,\n          })}\\n`,\n        );\n        clients.push(mcp);\n        successCount++;\n      } catch (err) {\n        // Non-fatal — skip and continue, same as `reasonix chat`. 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{\n      version: 1,\n      source: \"reasonix run\",\n      model: opts.model,\n      startedAt: new Date().toISOString(),\n    });\n    // Also persist the user turn itself (the loop's event stream starts with\n    // assistant output, not the prompt we're about to send).\n    writeRecord(transcriptStream, {\n      ts: new Date().toISOString(),\n      turn: 1,\n      role: \"user\",\n      content: opts.task,\n    });\n  }\n\n  try {\n    for await (const ev of loop.step(opts.task)) {\n      if (ev.role === \"assistant_delta\" && ev.content) process.stdout.write(ev.content);\n      if (ev.role === \"tool\") process.stdout.write(`\\n[tool ${ev.toolName}] ${ev.content}\\n`);\n      if (ev.role === \"error\") process.stderr.write(`\\n[error] ${ev.error}\\n`);\n      if (ev.role === \"done\") process.stdout.write(\"\\n\");\n      if (ev.role === \"assistant_final\" && ev.stats?.usage) {\n        // `reasonix run` is often used in CI / scripting — we want\n        // those turns to show up in `reasonix stats` too so the\n        // dashboard reflects all DeepSeek spend, not just TUI sessions.\n        appendUsage({ session: null, model: ev.stats.model, usage: ev.stats.usage });\n      }\n      // Persist every non-streaming event — deltas would flood the file and\n      // aren't useful for replay (replay renders final content, not keystrokes).\n      if (transcriptStream && ev.role !== \"assistant_delta\") {\n        writeRecord(transcriptStream, recordFromLoopEvent(ev, { model: opts.model, prefixHash }));\n      }\n    }\n  } finally {\n    transcriptStream?.end();\n  }\n\n  const s = loop.stats.summary();\n  process.stdout.write(\n    `\\n— turns:${s.turns} cache:${(s.cacheHitRatio * 100).toFixed(1)}% ` +\n      `cost:$${s.totalCostUsd.toFixed(6)} save-vs-claude:${s.savingsVsClaudePct.toFixed(1)}%\\n`,\n  );\n  if (opts.transcript) {\n    process.stdout.write(`\\ntranscript: ${opts.transcript}\\n`);\n    process.stdout.write(`  → npx reasonix replay 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package/dist/cli/{sessions-MOJAALJI.js → sessions-3XU2GGHX.js}

@@ -1,9 +1,10 @@
 #!/usr/bin/env node
-import "./chunk-Q6YFXW7H.js";
+import "./chunk-G7M3QWEN.js";
 import "./chunk-I6YIAK6C.js";
 import "./chunk-XJLZ4HKU.js";
 import "./chunk-XHQIK7B6.js";
 import "./chunk-6TMHAK5D.js";
+import "./chunk-DAEAAVDF.js";
 import "./chunk-KMWKGPFZ.js";
 import "./chunk-3Q3C4W66.js";
 import "./chunk-W4LDFAZ6.js";
@@ -99,4 +100,4 @@ function truncate(s, max) {
 export {
   sessionsCommand
 };
-//# sourceMappingURL=sessions-MOJAALJI.js.map
+//# sourceMappingURL=sessions-3XU2GGHX.js.map