react-msaview 8.4.0 → 9.0.0

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Files changed (87) hide show
  1. package/bundle/index.js +503 -89
  2. package/bundle/index.js.map +4 -4
  3. package/dist/components/MSAView.js +2 -2
  4. package/dist/components/MSAView.js.map +1 -1
  5. package/dist/components/MSAViewer.d.ts +1 -3
  6. package/dist/components/MSAViewer.js +1 -2
  7. package/dist/components/MSAViewer.js.map +1 -1
  8. package/dist/components/ResizeHandles.js +1 -1
  9. package/dist/components/ResizeHandles.js.map +1 -1
  10. package/dist/components/Track.js +1 -1
  11. package/dist/components/Track.js.map +1 -1
  12. package/dist/components/dialogs/ExportSVGDialog.js +2 -2
  13. package/dist/components/dialogs/ExportSVGDialog.js.map +1 -1
  14. package/dist/components/header/GoToBox.d.ts +332 -0
  15. package/dist/components/header/GoToBox.js +14 -4
  16. package/dist/components/header/GoToBox.js.map +1 -1
  17. package/dist/components/header/settingsMenuItems.js +4 -1
  18. package/dist/components/header/settingsMenuItems.js.map +1 -1
  19. package/dist/components/tree/CladeLabels.js +3 -3
  20. package/dist/components/tree/CladeLabels.js.map +1 -1
  21. package/dist/components/tree/TreeCanvas.js +4 -4
  22. package/dist/components/tree/TreeCanvas.js.map +1 -1
  23. package/dist/components/tree/TreeCanvasBlock.js +4 -4
  24. package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
  25. package/dist/components/tree/TreeOverview.js +10 -5
  26. package/dist/components/tree/TreeOverview.js.map +1 -1
  27. package/dist/components/tree/TreePanel.js +6 -2
  28. package/dist/components/tree/TreePanel.js.map +1 -1
  29. package/dist/components/tree/TreeRuler.js +2 -2
  30. package/dist/components/tree/TreeRuler.js.map +1 -1
  31. package/dist/components/tree/cladeBrackets.d.ts +8 -10
  32. package/dist/components/tree/cladeBrackets.js +7 -6
  33. package/dist/components/tree/cladeBrackets.js.map +1 -1
  34. package/dist/components/tree/clickMap.d.ts +2 -0
  35. package/dist/components/tree/clickMap.js.map +1 -1
  36. package/dist/components/tree/ellipsize.d.ts +8 -0
  37. package/dist/components/tree/ellipsize.js +20 -0
  38. package/dist/components/tree/ellipsize.js.map +1 -0
  39. package/dist/components/tree/renderTreeCanvas.js +30 -26
  40. package/dist/components/tree/renderTreeCanvas.js.map +1 -1
  41. package/dist/components/tree/renderTreeMouseover.js +1 -1
  42. package/dist/components/tree/renderTreeMouseover.js.map +1 -1
  43. package/dist/constants.d.ts +6 -3
  44. package/dist/constants.js +16 -6
  45. package/dist/constants.js.map +1 -1
  46. package/dist/measureTextCanvas.js +2 -2
  47. package/dist/measureTextCanvas.js.map +1 -1
  48. package/dist/model/treeModel.d.ts +14 -20
  49. package/dist/model/treeModel.js +16 -23
  50. package/dist/model/treeModel.js.map +1 -1
  51. package/dist/model.d.ts +192 -213
  52. package/dist/model.js +112 -104
  53. package/dist/model.js.map +1 -1
  54. package/dist/renderToSvg.js +24 -22
  55. package/dist/renderToSvg.js.map +1 -1
  56. package/dist/svgTestUtil.d.ts +252 -356
  57. package/dist/tipLabels.d.ts +8 -0
  58. package/dist/tipLabels.js +46 -0
  59. package/dist/tipLabels.js.map +1 -0
  60. package/dist/version.d.ts +1 -1
  61. package/dist/version.js +1 -1
  62. package/package.json +6 -6
  63. package/src/components/MSAView.tsx +2 -2
  64. package/src/components/MSAViewer.tsx +1 -5
  65. package/src/components/ResizeHandles.tsx +1 -1
  66. package/src/components/Track.tsx +1 -1
  67. package/src/components/dialogs/ExportSVGDialog.tsx +2 -2
  68. package/src/components/header/GoToBox.tsx +18 -4
  69. package/src/components/header/settingsMenuItems.ts +8 -0
  70. package/src/components/tree/CladeLabels.tsx +3 -3
  71. package/src/components/tree/TreeCanvas.tsx +10 -4
  72. package/src/components/tree/TreeCanvasBlock.tsx +4 -4
  73. package/src/components/tree/TreeOverview.tsx +10 -5
  74. package/src/components/tree/TreePanel.tsx +8 -2
  75. package/src/components/tree/TreeRuler.tsx +7 -3
  76. package/src/components/tree/cladeBrackets.ts +10 -17
  77. package/src/components/tree/clickMap.ts +2 -0
  78. package/src/components/tree/ellipsize.ts +24 -0
  79. package/src/components/tree/renderTreeCanvas.ts +42 -30
  80. package/src/components/tree/renderTreeMouseover.ts +1 -1
  81. package/src/constants.ts +17 -6
  82. package/src/measureTextCanvas.ts +2 -2
  83. package/src/model/treeModel.ts +17 -27
  84. package/src/model.ts +133 -128
  85. package/src/renderToSvg.tsx +24 -22
  86. package/src/tipLabels.ts +51 -0
  87. package/src/version.ts +1 -1
package/dist/svgTestUtil.d.ts CHANGED
@@ -1,11 +1,11 @@
1
1
  import MSAModelF from './model.ts';
2
2
  type Snapshot = NonNullable<Parameters<ReturnType<typeof MSAModelF>['create']>[0]>;
3
3
  export declare function installSvgTestEnv(contextExtras?: Partial<CanvasRenderingContext2D>): void;
4
- export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?: number): import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<Omit<Omit<Omit<{}, "autoTreeAreaWidth" | "drawLabels" | "drawNodeBubbles" | "drawNodeLabels" | "drawTree" | "labelsAlignRight" | "overviewHeight" | "showBranchLen" | "showTreeOverview" | "treeAreaWidth" | "treeOrder" | "treeWidth"> & {
4
+ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?: number): import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<Omit<Omit<Omit<{}, "drawLabels" | "drawNodeBubbles" | "drawNodeLabels" | "drawTree" | "labelsAlignRight" | "overviewHeight" | "showBranchLen" | "showTreeOverview" | "treeAreaWidth" | "treeOrder" | "treeWidth"> & {
5
5
  drawLabels: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
6
6
  labelsAlignRight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
7
- treeAreaWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
8
- treeWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
7
+ treeAreaWidth: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
8
+ treeWidth: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
9
9
  showBranchLen: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
10
10
  treeOrder: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<import("./types.ts").TreeOrder>, [undefined]>;
11
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  drawTree: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
@@ -13,7 +13,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
13
13
  drawNodeLabels: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
14
14
  showTreeOverview: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
15
15
  overviewHeight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
16
- autoTreeAreaWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
17
16
  }, "bgColor" | "colorSchemeName" | "customColorScheme" | "msaFormat" | "showColumnStats"> & {
18
17
  bgColor: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
19
18
  colorSchemeName: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -57,14 +56,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
57
56
  authInfo: any;
58
57
  }> | undefined;
59
58
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
60
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
59
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
61
60
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
62
61
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
63
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
62
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
64
63
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
65
64
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
66
65
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
67
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
66
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
68
67
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
69
68
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
70
69
  }> | {
@@ -75,41 +74,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
75
74
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
76
75
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
77
76
  }> | undefined;
78
- }, ({
79
- blobId: string;
80
- locationType: "BlobLocation";
81
- name: string;
82
- } & Partial<{
83
- locationType: "BlobLocation";
84
- name: string;
85
- blobId: string;
86
- }>) | ({
87
- handleId: string;
88
- locationType: "FileHandleLocation";
89
- name: string;
90
- } & Partial<{
91
- locationType: "FileHandleLocation";
92
- name: string;
93
- handleId: string;
94
- }>) | ({
95
- localPath: string;
96
- locationType: "LocalPathLocation";
97
- } & Partial<{
98
- locationType: "LocalPathLocation";
99
- localPath: string;
100
- }>) | ({
101
- locationType: "UriLocation";
102
- uri: string;
103
- } & Partial<{
104
- locationType: "UriLocation";
105
- uri: string;
106
- baseUri: string | undefined;
107
- internetAccountId: string | undefined;
108
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
109
- internetAccountType: string;
110
- authInfo: any;
111
- }> | undefined;
112
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
77
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
78
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
79
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
80
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
81
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
82
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
83
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
84
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
85
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
86
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
87
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
88
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
89
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
90
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
91
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
92
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
93
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
94
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
95
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
96
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
97
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
113
98
  locationType: "LocalPathLocation";
114
99
  localPath: string;
115
100
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -151,14 +136,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
151
136
  authInfo: any;
152
137
  }> | undefined;
153
138
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
154
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
139
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
155
140
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
156
141
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
157
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
142
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
158
143
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
159
144
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
160
145
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
161
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
146
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
162
147
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
163
148
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
164
149
  }> | {
@@ -169,41 +154,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
169
154
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
170
155
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
171
156
  }> | undefined;
172
- }, ({
173
- blobId: string;
174
- locationType: "BlobLocation";
175
- name: string;
176
- } & Partial<{
177
- locationType: "BlobLocation";
178
- name: string;
179
- blobId: string;
180
- }>) | ({
181
- handleId: string;
182
- locationType: "FileHandleLocation";
183
- name: string;
184
- } & Partial<{
185
- locationType: "FileHandleLocation";
186
- name: string;
187
- handleId: string;
188
- }>) | ({
189
- localPath: string;
190
- locationType: "LocalPathLocation";
191
- } & Partial<{
192
- locationType: "LocalPathLocation";
193
- localPath: string;
194
- }>) | ({
195
- locationType: "UriLocation";
196
- uri: string;
197
- } & Partial<{
198
- locationType: "UriLocation";
199
- uri: string;
200
- baseUri: string | undefined;
201
- internetAccountId: string | undefined;
202
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
203
- internetAccountType: string;
204
- authInfo: any;
205
- }> | undefined;
206
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
157
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
158
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
159
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
160
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
161
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
162
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
163
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
164
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
165
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
166
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
167
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
168
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
169
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
170
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
171
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
172
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
173
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
174
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
175
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
176
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
177
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
207
178
  locationType: "LocalPathLocation";
208
179
  localPath: string;
209
180
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -245,14 +216,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
245
216
  authInfo: any;
246
217
  }> | undefined;
247
218
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
248
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
219
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
249
220
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
250
221
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
251
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
222
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
252
223
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
253
224
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
254
225
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
255
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
226
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
256
227
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
257
228
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
258
229
  }> | {
@@ -263,41 +234,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
263
234
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
264
235
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
265
236
  }> | undefined;
266
- }, ({
267
- blobId: string;
268
- locationType: "BlobLocation";
269
- name: string;
270
- } & Partial<{
271
- locationType: "BlobLocation";
272
- name: string;
273
- blobId: string;
274
- }>) | ({
275
- handleId: string;
276
- locationType: "FileHandleLocation";
277
- name: string;
278
- } & Partial<{
279
- locationType: "FileHandleLocation";
280
- name: string;
281
- handleId: string;
282
- }>) | ({
283
- localPath: string;
284
- locationType: "LocalPathLocation";
285
- } & Partial<{
286
- locationType: "LocalPathLocation";
287
- localPath: string;
288
- }>) | ({
289
- locationType: "UriLocation";
290
- uri: string;
291
- } & Partial<{
292
- locationType: "UriLocation";
293
- uri: string;
294
- baseUri: string | undefined;
295
- internetAccountId: string | undefined;
296
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
297
- internetAccountType: string;
298
- authInfo: any;
299
- }> | undefined;
300
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
237
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
238
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
239
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
240
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
241
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
242
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
243
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
244
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
245
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
246
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
247
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
248
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
249
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
250
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
251
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
252
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
253
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
254
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
255
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
256
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
257
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
301
258
  locationType: "LocalPathLocation";
302
259
  localPath: string;
303
260
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -339,14 +296,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
339
296
  authInfo: any;
340
297
  }> | undefined;
341
298
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
342
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
299
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
343
300
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
344
301
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
345
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
302
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
346
303
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
347
304
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
348
305
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
349
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
306
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
350
307
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
351
308
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
352
309
  }> | {
@@ -357,41 +314,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
357
314
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
358
315
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
359
316
  }> | undefined;
360
- }, ({
361
- blobId: string;
362
- locationType: "BlobLocation";
363
- name: string;
364
- } & Partial<{
365
- locationType: "BlobLocation";
366
- name: string;
367
- blobId: string;
368
- }>) | ({
369
- handleId: string;
370
- locationType: "FileHandleLocation";
371
- name: string;
372
- } & Partial<{
373
- locationType: "FileHandleLocation";
374
- name: string;
375
- handleId: string;
376
- }>) | ({
377
- localPath: string;
378
- locationType: "LocalPathLocation";
379
- } & Partial<{
380
- locationType: "LocalPathLocation";
381
- localPath: string;
382
- }>) | ({
383
- locationType: "UriLocation";
384
- uri: string;
385
- } & Partial<{
386
- locationType: "UriLocation";
387
- uri: string;
388
- baseUri: string | undefined;
389
- internetAccountId: string | undefined;
390
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
391
- internetAccountType: string;
392
- authInfo: any;
393
- }> | undefined;
394
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
317
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
318
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
319
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
320
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
321
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
322
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
323
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
324
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
325
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
326
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
327
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
328
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
329
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
330
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
331
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
332
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
333
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
334
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
335
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
336
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
337
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
395
338
  locationType: "LocalPathLocation";
396
339
  localPath: string;
397
340
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -453,11 +396,10 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
453
396
  removeActiveDialog(): void;
454
397
  queueDialog(cb: (doneCallback: () => void) => [import("@jbrowse/core/util").DialogComponentType, unknown]): void;
455
398
  } & {
456
- setTreeAreaWidth(n: number): void;
457
- setTreeWidth(n: number): void;
399
+ setTreeAreaWidth(n: number | undefined): void;
400
+ setTreeWidth(n: number | undefined): void;
458
401
  setLabelsAlignRight(arg: boolean): void;
459
402
  setDrawTree(arg: boolean): void;
460
- setAutoTreeAreaWidth(arg: boolean): void;
461
403
  setShowBranchLen(arg: boolean): void;
462
404
  setTreeOrder(order: import("./types.ts").TreeOrder): void;
463
405
  setDrawNodeBubbles(arg: boolean): void;
@@ -589,6 +531,17 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
589
531
  readonly rowNamesSet: Map<string, number>;
590
532
  readonly resolvedClades: import("./types.ts").ResolvedClade[];
591
533
  readonly cladeGutterWidth: number;
534
+ readonly treeDrawn: boolean;
535
+ readonly treeTips: {
536
+ names: string[];
537
+ depth: number;
538
+ };
539
+ readonly maxTipLabelWidth: number;
540
+ readonly labelColumnWidth: number;
541
+ readonly fittedTreeAreaWidth: number;
542
+ readonly effectiveTreeAreaWidth: number;
543
+ readonly effectiveTreeWidth: number;
544
+ readonly showTreeText: boolean;
592
545
  readonly mouseOverRowName: string | undefined;
593
546
  readonly hoveredInsertion: {
594
547
  rowName: string;
@@ -654,7 +607,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
654
607
  readonly totalWidth: number;
655
608
  } & {
656
609
  readonly showMsaLetters: boolean;
657
- readonly showTreeText: boolean;
658
610
  } & {
659
611
  readonly columnTrackContent: Map<string, {
660
612
  values?: number[];
@@ -665,9 +617,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
665
617
  columnTrackModel(track: import("./types.ts").ColumnTrackSpec): import("./types.ts").BasicTrack;
666
618
  readonly columnTrackModels: import("./types.ts").BasicTrack[];
667
619
  } & {
668
- readonly labelWidthMap: Map<string, number>;
669
- readonly labelWidthScale: number;
670
- readonly labelsWidth: number;
671
620
  readonly secondaryStructureConsensus: string | undefined;
672
621
  readonly secondaryStructureArcs: import("./types.ts").Arc[] | undefined;
673
622
  readonly adapterTrackModels: import("./types.ts").BasicTrack[];
@@ -857,11 +806,11 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
857
806
  }): void;
858
807
  fitHorizontally(): void;
859
808
  afterCreate(): void;
860
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<Omit<Omit<Omit<{}, "autoTreeAreaWidth" | "drawLabels" | "drawNodeBubbles" | "drawNodeLabels" | "drawTree" | "labelsAlignRight" | "overviewHeight" | "showBranchLen" | "showTreeOverview" | "treeAreaWidth" | "treeOrder" | "treeWidth"> & {
809
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<Omit<Omit<Omit<{}, "drawLabels" | "drawNodeBubbles" | "drawNodeLabels" | "drawTree" | "labelsAlignRight" | "overviewHeight" | "showBranchLen" | "showTreeOverview" | "treeAreaWidth" | "treeOrder" | "treeWidth"> & {
861
810
  drawLabels: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
862
811
  labelsAlignRight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
863
- treeAreaWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
864
- treeWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
812
+ treeAreaWidth: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
813
+ treeWidth: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
865
814
  showBranchLen: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
866
815
  treeOrder: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<import("./types.ts").TreeOrder>, [undefined]>;
867
816
  drawTree: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
@@ -869,7 +818,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
869
818
  drawNodeLabels: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
870
819
  showTreeOverview: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
871
820
  overviewHeight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<number>, [undefined]>;
872
- autoTreeAreaWidth: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
873
821
  }, "bgColor" | "colorSchemeName" | "customColorScheme" | "msaFormat" | "showColumnStats"> & {
874
822
  bgColor: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
875
823
  colorSchemeName: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -913,14 +861,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
913
861
  authInfo: any;
914
862
  }> | undefined;
915
863
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
916
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
864
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
917
865
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
918
866
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
919
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
867
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
920
868
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
921
869
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
922
870
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
923
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
871
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
924
872
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
925
873
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
926
874
  }> | {
@@ -931,41 +879,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
931
879
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
932
880
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
933
881
  }> | undefined;
934
- }, ({
935
- blobId: string;
936
- locationType: "BlobLocation";
937
- name: string;
938
- } & Partial<{
939
- locationType: "BlobLocation";
940
- name: string;
941
- blobId: string;
942
- }>) | ({
943
- handleId: string;
944
- locationType: "FileHandleLocation";
945
- name: string;
946
- } & Partial<{
947
- locationType: "FileHandleLocation";
948
- name: string;
949
- handleId: string;
950
- }>) | ({
951
- localPath: string;
952
- locationType: "LocalPathLocation";
953
- } & Partial<{
954
- locationType: "LocalPathLocation";
955
- localPath: string;
956
- }>) | ({
957
- locationType: "UriLocation";
958
- uri: string;
959
- } & Partial<{
960
- locationType: "UriLocation";
961
- uri: string;
962
- baseUri: string | undefined;
963
- internetAccountId: string | undefined;
964
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
965
- internetAccountType: string;
966
- authInfo: any;
967
- }> | undefined;
968
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
882
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
883
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
884
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
885
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
886
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
887
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
888
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
889
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
890
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
891
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
892
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
893
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
894
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
895
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
896
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
897
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
898
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
899
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
900
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
901
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
902
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
969
903
  locationType: "LocalPathLocation";
970
904
  localPath: string;
971
905
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -1007,14 +941,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1007
941
  authInfo: any;
1008
942
  }> | undefined;
1009
943
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1010
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
944
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1011
945
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1012
946
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1013
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
947
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1014
948
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1015
949
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1016
950
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1017
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
951
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1018
952
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1019
953
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1020
954
  }> | {
@@ -1025,41 +959,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1025
959
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1026
960
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
1027
961
  }> | undefined;
1028
- }, ({
1029
- blobId: string;
1030
- locationType: "BlobLocation";
1031
- name: string;
1032
- } & Partial<{
1033
- locationType: "BlobLocation";
1034
- name: string;
1035
- blobId: string;
1036
- }>) | ({
1037
- handleId: string;
1038
- locationType: "FileHandleLocation";
1039
- name: string;
1040
- } & Partial<{
1041
- locationType: "FileHandleLocation";
1042
- name: string;
1043
- handleId: string;
1044
- }>) | ({
1045
- localPath: string;
1046
- locationType: "LocalPathLocation";
1047
- } & Partial<{
1048
- locationType: "LocalPathLocation";
1049
- localPath: string;
1050
- }>) | ({
1051
- locationType: "UriLocation";
1052
- uri: string;
1053
- } & Partial<{
1054
- locationType: "UriLocation";
1055
- uri: string;
1056
- baseUri: string | undefined;
1057
- internetAccountId: string | undefined;
1058
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
1059
- internetAccountType: string;
1060
- authInfo: any;
1061
- }> | undefined;
1062
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
962
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
963
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
964
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
965
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
966
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
967
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
968
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
969
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
970
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
971
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
972
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
973
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
974
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
975
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
976
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
977
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
978
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
979
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
980
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
981
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
982
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
1063
983
  locationType: "LocalPathLocation";
1064
984
  localPath: string;
1065
985
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -1101,14 +1021,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1101
1021
  authInfo: any;
1102
1022
  }> | undefined;
1103
1023
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1104
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1024
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1105
1025
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1106
1026
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1107
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1027
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1108
1028
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1109
1029
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1110
1030
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1111
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1031
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1112
1032
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1113
1033
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1114
1034
  }> | {
@@ -1119,41 +1039,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1119
1039
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1120
1040
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
1121
1041
  }> | undefined;
1122
- }, ({
1123
- blobId: string;
1124
- locationType: "BlobLocation";
1125
- name: string;
1126
- } & Partial<{
1127
- locationType: "BlobLocation";
1128
- name: string;
1129
- blobId: string;
1130
- }>) | ({
1131
- handleId: string;
1132
- locationType: "FileHandleLocation";
1133
- name: string;
1134
- } & Partial<{
1135
- locationType: "FileHandleLocation";
1136
- name: string;
1137
- handleId: string;
1138
- }>) | ({
1139
- localPath: string;
1140
- locationType: "LocalPathLocation";
1141
- } & Partial<{
1142
- locationType: "LocalPathLocation";
1143
- localPath: string;
1144
- }>) | ({
1145
- locationType: "UriLocation";
1146
- uri: string;
1147
- } & Partial<{
1148
- locationType: "UriLocation";
1149
- uri: string;
1150
- baseUri: string | undefined;
1151
- internetAccountId: string | undefined;
1152
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
1153
- internetAccountType: string;
1154
- authInfo: any;
1155
- }> | undefined;
1156
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
1042
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1043
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1044
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1045
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1046
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1047
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1048
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1049
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1050
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1051
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1052
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1053
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1054
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
1055
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1056
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1057
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1058
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
1059
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1060
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
1061
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1062
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
1157
1063
  locationType: "LocalPathLocation";
1158
1064
  localPath: string;
1159
1065
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -1195,14 +1101,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1195
1101
  authInfo: any;
1196
1102
  }> | undefined;
1197
1103
  }>, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1198
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1104
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1199
1105
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1200
1106
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1201
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1107
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1202
1108
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1203
1109
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1204
1110
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1205
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1111
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1206
1112
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1207
1113
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1208
1114
  }> | {
@@ -1213,41 +1119,27 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1213
1119
  internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1214
1120
  authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
1215
1121
  }> | undefined;
1216
- }, ({
1217
- blobId: string;
1218
- locationType: "BlobLocation";
1219
- name: string;
1220
- } & Partial<{
1221
- locationType: "BlobLocation";
1222
- name: string;
1223
- blobId: string;
1224
- }>) | ({
1225
- handleId: string;
1226
- locationType: "FileHandleLocation";
1227
- name: string;
1228
- } & Partial<{
1229
- locationType: "FileHandleLocation";
1230
- name: string;
1231
- handleId: string;
1232
- }>) | ({
1233
- localPath: string;
1234
- locationType: "LocalPathLocation";
1235
- } & Partial<{
1236
- locationType: "LocalPathLocation";
1237
- localPath: string;
1238
- }>) | ({
1239
- locationType: "UriLocation";
1240
- uri: string;
1241
- } & Partial<{
1242
- locationType: "UriLocation";
1243
- uri: string;
1244
- baseUri: string | undefined;
1245
- internetAccountId: string | undefined;
1246
- internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").ModelCreationType<{
1247
- internetAccountType: string;
1248
- authInfo: any;
1249
- }> | undefined;
1250
- }>)>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
1122
+ }, import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1123
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1124
+ localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1125
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1126
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1127
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1128
+ blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1129
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1130
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1131
+ name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1132
+ handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1133
+ }> | import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1134
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"UriLocation">;
1135
+ uri: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1136
+ baseUri: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1137
+ internetAccountId: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1138
+ internetAccountPreAuthorization: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IModelType<{
1139
+ internetAccountType: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1140
+ authInfo: import("@jbrowse/mobx-state-tree").IType<any, any, any>;
1141
+ }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1142
+ }>>, import("@jbrowse/core/util/types/mst").LegacyFileLocation | import("@jbrowse/mobx-state-tree").ModelCreationType<{
1251
1143
  locationType: "LocalPathLocation";
1252
1144
  localPath: string;
1253
1145
  }> | import("@jbrowse/mobx-state-tree").ModelCreationType<{
@@ -1309,11 +1201,10 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1309
1201
  removeActiveDialog(): void;
1310
1202
  queueDialog(cb: (doneCallback: () => void) => [import("@jbrowse/core/util").DialogComponentType, unknown]): void;
1311
1203
  } & {
1312
- setTreeAreaWidth(n: number): void;
1313
- setTreeWidth(n: number): void;
1204
+ setTreeAreaWidth(n: number | undefined): void;
1205
+ setTreeWidth(n: number | undefined): void;
1314
1206
  setLabelsAlignRight(arg: boolean): void;
1315
1207
  setDrawTree(arg: boolean): void;
1316
- setAutoTreeAreaWidth(arg: boolean): void;
1317
1208
  setShowBranchLen(arg: boolean): void;
1318
1209
  setTreeOrder(order: import("./types.ts").TreeOrder): void;
1319
1210
  setDrawNodeBubbles(arg: boolean): void;
@@ -1445,6 +1336,17 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1445
1336
  readonly rowNamesSet: Map<string, number>;
1446
1337
  readonly resolvedClades: import("./types.ts").ResolvedClade[];
1447
1338
  readonly cladeGutterWidth: number;
1339
+ readonly treeDrawn: boolean;
1340
+ readonly treeTips: {
1341
+ names: string[];
1342
+ depth: number;
1343
+ };
1344
+ readonly maxTipLabelWidth: number;
1345
+ readonly labelColumnWidth: number;
1346
+ readonly fittedTreeAreaWidth: number;
1347
+ readonly effectiveTreeAreaWidth: number;
1348
+ readonly effectiveTreeWidth: number;
1349
+ readonly showTreeText: boolean;
1448
1350
  readonly mouseOverRowName: string | undefined;
1449
1351
  readonly hoveredInsertion: {
1450
1352
  rowName: string;
@@ -1510,7 +1412,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1510
1412
  readonly totalWidth: number;
1511
1413
  } & {
1512
1414
  readonly showMsaLetters: boolean;
1513
- readonly showTreeText: boolean;
1514
1415
  } & {
1515
1416
  readonly columnTrackContent: Map<string, {
1516
1417
  values?: number[];
@@ -1521,9 +1422,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1521
1422
  columnTrackModel(track: import("./types.ts").ColumnTrackSpec): import("./types.ts").BasicTrack;
1522
1423
  readonly columnTrackModels: import("./types.ts").BasicTrack[];
1523
1424
  } & {
1524
- readonly labelWidthMap: Map<string, number>;
1525
- readonly labelWidthScale: number;
1526
- readonly labelsWidth: number;
1527
1425
  readonly secondaryStructureConsensus: string | undefined;
1528
1426
  readonly secondaryStructureArcs: import("./types.ts").Arc[] | undefined;
1529
1427
  readonly adapterTrackModels: import("./types.ts").BasicTrack[];
@@ -1721,8 +1619,8 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1721
1619
  msaFormat: import("msa-parsers").MSAFormat | undefined;
1722
1620
  drawLabels: boolean;
1723
1621
  labelsAlignRight: boolean;
1724
- treeAreaWidth: number;
1725
- treeWidth: number;
1622
+ treeAreaWidth: number | undefined;
1623
+ treeWidth: number | undefined;
1726
1624
  showBranchLen: boolean;
1727
1625
  treeOrder: import("./types.ts").TreeOrder;
1728
1626
  drawTree: boolean;
@@ -1730,7 +1628,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1730
1628
  drawNodeLabels: boolean;
1731
1629
  showTreeOverview: boolean;
1732
1630
  overviewHeight: number;
1733
- autoTreeAreaWidth: boolean;
1734
1631
  columnTracks: import("./types.ts").ColumnTrackSpec[];
1735
1632
  id: string;
1736
1633
  showDomains: boolean;
@@ -1748,14 +1645,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1748
1645
  scrollX: number;
1749
1646
  colWidth: number;
1750
1647
  treeFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1751
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1648
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1752
1649
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1753
1650
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1754
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1651
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1755
1652
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1756
1653
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1757
1654
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1758
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1655
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1759
1656
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1760
1657
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1761
1658
  }> | {
@@ -1768,14 +1665,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1768
1665
  }> | undefined;
1769
1666
  } | undefined;
1770
1667
  msaFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1771
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1668
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1772
1669
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1773
1670
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1774
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1671
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1775
1672
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1776
1673
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1777
1674
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1778
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1675
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1779
1676
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1780
1677
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1781
1678
  }> | {
@@ -1788,14 +1685,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1788
1685
  }> | undefined;
1789
1686
  } | undefined;
1790
1687
  treeMetadataFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1791
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1688
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1792
1689
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1793
1690
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1794
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1691
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1795
1692
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1796
1693
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1797
1694
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1798
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1695
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1799
1696
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1800
1697
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1801
1698
  }> | {
@@ -1808,14 +1705,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1808
1705
  }> | undefined;
1809
1706
  } | undefined;
1810
1707
  gffFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1811
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1708
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1812
1709
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1813
1710
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1814
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1711
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1815
1712
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1816
1713
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1817
1714
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1818
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1715
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1819
1716
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1820
1717
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1821
1718
  }> | {
@@ -1859,8 +1756,8 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1859
1756
  msaFormat: import("msa-parsers").MSAFormat | undefined;
1860
1757
  drawLabels: boolean;
1861
1758
  labelsAlignRight: boolean;
1862
- treeAreaWidth: number;
1863
- treeWidth: number;
1759
+ treeAreaWidth: number | undefined;
1760
+ treeWidth: number | undefined;
1864
1761
  showBranchLen: boolean;
1865
1762
  treeOrder: import("./types.ts").TreeOrder;
1866
1763
  drawTree: boolean;
@@ -1868,7 +1765,6 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1868
1765
  drawNodeLabels: boolean;
1869
1766
  showTreeOverview: boolean;
1870
1767
  overviewHeight: number;
1871
- autoTreeAreaWidth: boolean;
1872
1768
  columnTracks?: undefined;
1873
1769
  id: string;
1874
1770
  showDomains: boolean;
@@ -1886,14 +1782,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1886
1782
  scrollX: number;
1887
1783
  colWidth: number;
1888
1784
  treeFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1889
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1785
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1890
1786
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1891
1787
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1892
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1788
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1893
1789
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1894
1790
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1895
1791
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1896
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1792
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1897
1793
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1898
1794
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1899
1795
  }> | {
@@ -1906,14 +1802,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1906
1802
  }> | undefined;
1907
1803
  } | undefined;
1908
1804
  msaFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1909
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1805
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1910
1806
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1911
1807
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1912
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1808
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1913
1809
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1914
1810
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1915
1811
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1916
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1812
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1917
1813
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1918
1814
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1919
1815
  }> | {
@@ -1926,14 +1822,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1926
1822
  }> | undefined;
1927
1823
  } | undefined;
1928
1824
  treeMetadataFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1929
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1825
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1930
1826
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1931
1827
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1932
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1828
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1933
1829
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1934
1830
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1935
1831
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1936
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1832
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1937
1833
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1938
1834
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1939
1835
  }> | {
@@ -1946,14 +1842,14 @@ export declare function createTestModel(snapshot: Omit<Snapshot, 'type'>, width?
1946
1842
  }> | undefined;
1947
1843
  } | undefined;
1948
1844
  gffFilehandle: import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1949
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"LocalPathLocation">;
1845
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"LocalPathLocation">;
1950
1846
  localPath: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1951
1847
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1952
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"BlobLocation">;
1848
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"BlobLocation">;
1953
1849
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1954
1850
  blobId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1955
1851
  }> | import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1956
- locationType: import("@jbrowse/mobx-state-tree").ISimpleType<"FileHandleLocation">;
1852
+ locationType: import("@jbrowse/mobx-state-tree").ILiteralType<"FileHandleLocation">;
1957
1853
  name: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1958
1854
  handleId: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1959
1855
  }> | {