react-msaview 5.6.0 → 5.6.2

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Files changed (94) hide show
  1. package/bundle/index.js +95 -95
  2. package/bundle/index.js.map +4 -4
  3. package/dist/clustalX.d.ts +4 -3
  4. package/dist/clustalX.js +25 -4
  5. package/dist/clustalX.js.map +1 -1
  6. package/dist/columnCounts.d.ts +37 -0
  7. package/dist/columnCounts.js +148 -0
  8. package/dist/columnCounts.js.map +1 -0
  9. package/dist/components/MSAView.js +1 -8
  10. package/dist/components/MSAView.js.map +1 -1
  11. package/dist/components/getVisibleLeaves.d.ts +6 -0
  12. package/dist/components/getVisibleLeaves.js.map +1 -0
  13. package/dist/components/msa/MSACanvasBlock.js +17 -54
  14. package/dist/components/msa/MSACanvasBlock.js.map +1 -1
  15. package/dist/components/msa/renderBoxFeatureCanvasBlock.d.ts +2 -1
  16. package/dist/components/msa/renderBoxFeatureCanvasBlock.js +21 -19
  17. package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
  18. package/dist/components/msa/renderMSABlock.js +97 -96
  19. package/dist/components/msa/renderMSABlock.js.map +1 -1
  20. package/dist/components/msa/renderMSAMouseover.js +9 -32
  21. package/dist/components/msa/renderMSAMouseover.js.map +1 -1
  22. package/dist/components/msa/useMsaBlockMouse.d.ts +23 -0
  23. package/dist/components/msa/useMsaBlockMouse.js +45 -0
  24. package/dist/components/msa/useMsaBlockMouse.js.map +1 -0
  25. package/dist/components/tree/TreeCanvas.js +14 -19
  26. package/dist/components/tree/TreeCanvas.js.map +1 -1
  27. package/dist/components/tree/TreeCanvasBlock.js +40 -111
  28. package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
  29. package/dist/components/tree/renderTreeCanvas.d.ts +2 -0
  30. package/dist/components/tree/renderTreeCanvas.js +15 -3
  31. package/dist/components/tree/renderTreeCanvas.js.map +1 -1
  32. package/dist/components/tree/useTreeHover.d.ts +24 -0
  33. package/dist/components/tree/useTreeHover.js +44 -0
  34. package/dist/components/tree/useTreeHover.js.map +1 -0
  35. package/dist/hierarchy.js +15 -9
  36. package/dist/hierarchy.js.map +1 -1
  37. package/dist/model/msaModel.js +4 -3
  38. package/dist/model/msaModel.js.map +1 -1
  39. package/dist/model/treeModel.js +9 -8
  40. package/dist/model/treeModel.js.map +1 -1
  41. package/dist/model.d.ts +52 -10
  42. package/dist/model.js +208 -93
  43. package/dist/model.js.map +1 -1
  44. package/dist/propertyConservation.d.ts +2 -1
  45. package/dist/propertyConservation.js +36 -25
  46. package/dist/propertyConservation.js.map +1 -1
  47. package/dist/seqPosToGlobalCol.d.ts +7 -0
  48. package/dist/seqPosToGlobalCol.js +17 -0
  49. package/dist/seqPosToGlobalCol.js.map +1 -1
  50. package/dist/stripDefault.d.ts +21 -0
  51. package/dist/stripDefault.js +26 -0
  52. package/dist/stripDefault.js.map +1 -0
  53. package/dist/types.d.ts +16 -0
  54. package/dist/version.d.ts +1 -1
  55. package/dist/version.js +1 -1
  56. package/package.json +3 -3
  57. package/src/clustalX.test.ts +9 -11
  58. package/src/clustalX.ts +27 -28
  59. package/src/colorSchemes.docs.test.ts +3 -1
  60. package/src/columnCounts.test.ts +58 -0
  61. package/src/columnCounts.ts +170 -0
  62. package/src/components/MSAView.tsx +1 -9
  63. package/src/components/{msa/getVisibleLeaves.ts → getVisibleLeaves.ts} +1 -1
  64. package/src/components/msa/MSACanvasBlock.tsx +42 -110
  65. package/src/components/msa/renderBoxFeatureCanvasBlock.ts +25 -18
  66. package/src/components/msa/renderMSABlock.ts +113 -125
  67. package/src/components/msa/renderMSAMouseover.ts +11 -34
  68. package/src/components/msa/useMsaBlockMouse.ts +81 -0
  69. package/src/components/tree/TreeCanvas.tsx +16 -23
  70. package/src/components/tree/TreeCanvasBlock.tsx +62 -143
  71. package/src/components/tree/renderTreeCanvas.test.ts +100 -190
  72. package/src/components/tree/renderTreeCanvas.ts +14 -3
  73. package/src/components/tree/useTreeHover.ts +69 -0
  74. package/src/domainBands.test.ts +98 -0
  75. package/src/hierarchy.ts +15 -9
  76. package/src/model/msaModel.ts +4 -3
  77. package/src/model/treeModel.ts +9 -8
  78. package/src/model.ts +241 -106
  79. package/src/propertyConservation.test.ts +2 -13
  80. package/src/propertyConservation.ts +40 -31
  81. package/src/rowSpace.test.ts +46 -0
  82. package/src/seqPosToGlobalCol.ts +18 -0
  83. package/src/stripDefault.test.ts +48 -0
  84. package/src/stripDefault.ts +35 -0
  85. package/src/stripDefaultSnapshot.test.ts +4 -1
  86. package/src/types.ts +23 -0
  87. package/src/version.ts +1 -1
  88. package/dist/components/msa/getVisibleLeaves.d.ts +0 -6
  89. package/dist/components/msa/getVisibleLeaves.js.map +0 -1
  90. package/dist/useDevicePixelRatio.d.ts +0 -1
  91. package/dist/useDevicePixelRatio.js +0 -27
  92. package/dist/useDevicePixelRatio.js.map +0 -1
  93. package/src/useDevicePixelRatio.ts +0 -29
  94. /package/dist/components/{msa/getVisibleLeaves.js → getVisibleLeaves.js} +0 -0

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