react-msaview 5.1.1 → 5.2.0

package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map

@@ -1 +1 @@
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+{"version":3,"file":"renderBoxFeatureCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderBoxFeatureCanvasBlock.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AAOxD,MAAM,UAAU,2BAA2B,CAAC,EAC1C,KAAK,EACL,OAAO,EACP,OAAO,EACP,GAAG,EACH,0BAA0B,EAC1B,kBAAkB,GAQnB;IACC,MAAM,EAAE,SAAS,EAAE,SAAS,EAAE,kBAAkB,EAAE,WAAW,EAAE,GAAG,KAAK,CAAA;IACvE,IAAI,WAAW,EAAE,CAAC;QAChB,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;QAC1D,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;QAC1C,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;QACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,SAAS,GAAG,CAAC,GAAG,OAAO,CAAC,CAAA;QAEhD,MAAM,aAAa,GAAG,gBAAgB,CAAC,EAAE,KAAK,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC,CAAA;QAE1E,SAAS,CAAC;YACR,KAAK;YACL,GAAG;YACH,aAAa;SACd,CAAC,CAAA;IACJ,CAAC;AACH,CAAC;AAED,SAAS,SAAS,CAAC,EACjB,KAAK,EACL,GAAG,EACH,aAAa,GAKd;IACC,MAAM,EACJ,cAAc,EACd,QAAQ,EACR,SAAS,EACT,WAAW,EACX,aAAa,EACb,uCAAuC,GACxC,GAAG,KAAK,CAAA;IAET,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,aAAa,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;QACvD,MAAM,IAAI,GAAG,aAAa,CAAC,CAAC,CAAE,CAAA;QAC9B,MAAM,EACJ,CAAC,EACD,IAAI,EAAE,EAAE,IAAI,EAAE,GACf,GAAG,IAAI,CAAA;QACR,MAAM,CAAC,GAAG,CAAE,CAAA;QAEZ,MAAM,KAAK,GAAG,uCAAuC,CAAC,IAAI,CAAC,CAAA;QAE3D,IAAI,KAAK,EAAE,CAAC;YACV,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;gBAC/C,MAAM,EAAE,KAAK,EAAE,GAAG,EAAE,SAAS,EAAE,GAAG,KAAK,CAAC,CAAC,CAAE,CAAA;gBAC3C,yDAAyD;gBACzD,6DAA6D;gBAC7D,MAAM,EAAE,GAAG,KAAK,CAAC,kBAAkB,CAAC,IAAI,EAAE,KAAK,GAAG,CAAC,CAAC,CAAA;gBACpD,MAAM,EAAE,GAAG,KAAK,CAAC,kBAAkB,CAAC,IAAI,EAAE,GAAG,CAAC,CAAA;gBAC9C,IAAI,EAAE,KAAK,SAAS,IAAI,EAAE,KAAK,SAAS,EAAE,CAAC;oBACzC,SAAQ,CAAC,oCAAoC;gBAC/C,CAAC;gBACD,MAAM,CAAC,GAAG,EAAE,GAAG,QAAQ,CAAA;gBACvB,GAAG,CAAC,SAAS,GAAG,WAAW,CAAC,SAAS,CAAE,CAAA;gBACvC,GAAG,CAAC,WAAW,GAAG,aAAa,CAAC,SAAS,CAAE,CAAA;gBAC3C,MAAM,CAAC,GAAG,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,SAAS,CAAA;gBACxC,MAAM,CAAC,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;gBACtD,MAAM,EAAE,GAAG,QAAQ,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,CAAA;gBAC/B,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAA;gBACzB,GAAG,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAA;YAC7B,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC"}

package/dist/components/msa/renderMSABlock.d.ts

@@ -1,4 +1,5 @@
 import type { MsaViewModel } from '../../model.ts';
+import type { RenderCtx } from '../renderCtx.ts';
 import type { Theme } from '@mui/material';
 export declare function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, theme, highResScaleFactorOverride, blockSizeXOverride, blockSizeYOverride, }: {
     offsetX: number;
@@ -6,7 +7,7 @@ export declare function renderMSABlock({ model, offsetX, offsetY, contrastScheme
     theme: Theme;
     model: MsaViewModel;
     contrastScheme: Record<string, string>;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     highResScaleFactorOverride?: number;
     blockSizeXOverride?: number;
     blockSizeYOverride?: number;

package/dist/components/msa/renderMSABlock.js

@@ -1,8 +1,11 @@
+import { getVisibleLeaves } from "./getVisibleLeaves.js";
+import { visibleColRange } from "./visibleColRange.js";
+import { adjustColorForContrast } from "../../util.js";
 export function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, theme, highResScaleFactorOverride, blockSizeXOverride, blockSizeYOverride, }) {
-    const { colWidth, blockSize, rowHeight, fontSize, highResScaleFactor, actuallyShowDomains, leaves, bgColor, } = model;
-    const k = highResScaleFactorOverride || highResScaleFactor;
-    const bx = blockSizeXOverride || blockSize;
-    const by = blockSizeYOverride || blockSize;
+    const { colWidth, blockSize, rowHeight, fontSize, highResScaleFactor, actuallyShowDomains, bgColor, } = model;
+    const k = highResScaleFactorOverride ?? highResScaleFactor;
+    const bx = blockSizeXOverride ?? blockSize;
+    const by = blockSizeYOverride ?? blockSize;
     ctx.resetTransform();
     ctx.scale(k, k);
     ctx.translate(-offsetX, rowHeight / 2 - offsetY);
@@ -11,31 +14,40 @@ export function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, t
     // (an invalid "bold bold 16px" string would be silently ignored by canvas,
     // freezing the font size against zoom changes)
     ctx.font = ctx.font.replace(/(?:bold )?\d+px/, `${bgColor ? '' : 'bold '}${fontSize}px`);
-    const yStart = Math.max(0, Math.floor((offsetY - rowHeight) / rowHeight));
-    const yEnd = Math.max(0, Math.ceil((offsetY + by + rowHeight) / rowHeight));
-    const xStart = Math.max(0, Math.floor(offsetX / colWidth));
-    const xEnd = Math.max(0, Math.ceil((offsetX + bx) / colWidth));
-    const visibleLeaves = leaves.slice(yStart, yEnd);
+    const { xStart, xEnd } = visibleColRange({
+        offsetX,
+        blockWidth: bx,
+        colWidth,
+    });
+    const visibleLeaves = getVisibleLeaves({ model, offsetY, blockSizeY: by });
+    const { relativeTo, columns } = model;
+    const referenceSeq = relativeTo
+        ? columns.get(relativeTo)?.slice(xStart, xEnd)
+        : null;
     if (!actuallyShowDomains) {
-        drawTiles({
+        drawTilesAndText({
             model,
             ctx,
             theme,
+            contrastScheme,
             offsetX,
             xStart,
             xEnd,
             visibleLeaves,
+            referenceSeq,
+        });
+    }
+    else {
+        drawText({
+            model,
+            ctx,
+            offsetX,
+            xStart,
+            xEnd,
+            visibleLeaves,
+            referenceSeq,
         });
     }
-    drawText({
-        model,
-        ctx,
-        offsetX,
-        contrastScheme,
-        xStart,
-        xEnd,
-        visibleLeaves,
-    });
     drawInsertionIndicators({
         model,
         ctx,
@@ -45,81 +57,83 @@ export function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, t
     });
     ctx.resetTransform();
 }
-function drawTiles({ model, offsetX, ctx, visibleLeaves, theme, xStart, xEnd, }) {
-    const { bgColor, colorSchemeName, colorScheme, columns, colWidth, rowHeight, relativeTo, } = model;
-    // Get reference sequence if relativeTo is set
-    const referenceSeq = relativeTo
-        ? columns[relativeTo]?.slice(xStart, xEnd)
-        : null;
+function drawTilesAndText({ model, offsetX, ctx, theme, contrastScheme, visibleLeaves, xStart, xEnd, referenceSeq, }) {
+    const { bgColor, colorSchemeName, colorScheme, columns, colWidth, rowHeight, relativeTo, showMsaLetters, } = model;
     const isClustalX = colorSchemeName === 'clustalx_protein_dynamic';
     const isPercentIdentity = colorSchemeName === 'percent_identity_dynamic';
+    const drawBgTiles = bgColor || isClustalX || isPercentIdentity;
+    if (!drawBgTiles && !showMsaLetters) {
+        return;
+    }
     const offsetXAligned = offsetX - (offsetX % colWidth);
+    const halfColWidth = colWidth / 2;
+    const quarterRowHeight = rowHeight / 4;
     for (let i = 0, l1 = visibleLeaves.length; i < l1; i++) {
         const node = visibleLeaves[i];
-        const { data: { name }, } = node;
+        const { name } = node.data;
         const y = node.x;
-        const str = columns[name]?.slice(xStart, xEnd);
-        if (str) {
-            for (let j = 0, l2 = str.length; j < l2; j++) {
-                const letter = str[j];
-                // Use a muted background for positions that match reference
-                const isMatchingReference = referenceSeq && name !== relativeTo && letter === referenceSeq[j];
-                let color;
-                if (isClustalX) {
-                    color = model.colClustalX[xStart + j][letter];
-                }
-                else if (isPercentIdentity) {
-                    const consensus = model.colConsensus[xStart + j];
-                    color = letter === consensus.letter ? consensus.color : undefined;
-                }
-                else {
-                    color = colorScheme[letter.toUpperCase()];
-                }
-                if (bgColor || isClustalX || isPercentIdentity) {
-                    // Use a very light background for matching positions in relative mode
-                    const finalColor = isMatchingReference
-                        ? theme.palette.action.hover
-                        : color || theme.palette.background.default;
-                    ctx.fillStyle = finalColor;
-                    ctx.fillRect(j * colWidth + offsetXAligned, y - rowHeight, colWidth, rowHeight);
-                }
+        const str = columns.get(name)?.slice(xStart, xEnd);
+        if (!str) {
+            continue;
+        }
+        const tileY = y - rowHeight;
+        const textY = y - quarterRowHeight;
+        for (let j = 0, l2 = str.length; j < l2; j++) {
+            const letter = str[j];
+            const x = j * colWidth + offsetXAligned;
+            const isMatchingReference = referenceSeq && name !== relativeTo && letter === referenceSeq[j];
+            let color;
+            if (isClustalX) {
+                color = model.colClustalX[xStart + j][letter];
+            }
+            else if (isPercentIdentity) {
+                const consensus = model.colConsensus[xStart + j];
+                color = letter === consensus.letter ? consensus.color : undefined;
+            }
+            else {
+                color = colorScheme[letter];
+            }
+            if (drawBgTiles) {
+                ctx.fillStyle = isMatchingReference
+                    ? theme.palette.action.hover
+                    : color || theme.palette.background.default;
+                ctx.fillRect(x, tileY, colWidth, rowHeight);
+            }
+            if (showMsaLetters) {
+                ctx.fillStyle = bgColor
+                    ? (contrastScheme[letter] ?? 'black')
+                    : color
+                        ? adjustColorForContrast(color, theme.palette.background.default)
+                        : theme.palette.text.primary;
+                ctx.fillText(isMatchingReference ? '.' : letter, x + halfColWidth, textY);
             }
         }
     }
 }
-function drawText({ model, offsetX, contrastScheme, ctx, visibleLeaves, xStart, xEnd, }) {
-    const { bgColor, actuallyShowDomains, showMsaLetters, colorScheme, columns, colWidth, rowHeight, relativeTo, } = model;
-    // Get reference sequence if relativeTo is set
-    const referenceSeq = relativeTo
-        ? columns[relativeTo]?.slice(xStart, xEnd)
-        : null;
-    if (showMsaLetters) {
-        const offsetXAligned = offsetX - (offsetX % colWidth);
-        const halfColWidth = colWidth / 2;
-        const quarterRowHeight = rowHeight / 4;
-        for (let i = 0, l1 = visibleLeaves.length; i < l1; i++) {
-            const node = visibleLeaves[i];
-            const { data: { name }, } = node;
-            const y = node.x - quarterRowHeight;
-            const str = columns[name]?.slice(xStart, xEnd);
-            if (str) {
-                for (let j = 0, l2 = str.length; j < l2; j++) {
-                    const letter = str[j];
-                    // Check if this position matches the reference
-                    const isMatchingReference = referenceSeq && name !== relativeTo && letter === referenceSeq[j];
-                    // Show dot for matching positions, original letter for differences
-                    const displayLetter = isMatchingReference ? '.' : letter;
-                    const color = colorScheme[letter.toUpperCase()];
-                    const contrast = contrastScheme[letter.toUpperCase()] || 'black';
-                    // note: -rowHeight/4 matches +rowHeight/4 in tree
-                    ctx.fillStyle = actuallyShowDomains
-                        ? 'black'
-                        : bgColor
-                            ? contrast
-                            : color || 'black';
-                    ctx.fillText(displayLetter, j * colWidth + offsetXAligned + halfColWidth, y);
-                }
-            }
+// When domains are shown the background tiles come from renderBoxFeatureCanvasBlock,
+// so we only need to draw text here.
+function drawText({ model, offsetX, ctx, visibleLeaves, xStart, xEnd, referenceSeq, }) {
+    const { showMsaLetters, columns, colWidth, rowHeight, relativeTo } = model;
+    if (!showMsaLetters) {
+        return;
+    }
+    const offsetXAligned = offsetX - (offsetX % colWidth);
+    const halfColWidth = colWidth / 2;
+    const quarterRowHeight = rowHeight / 4;
+    // note: -rowHeight/4 matches +rowHeight/4 in tree
+    ctx.fillStyle = 'black';
+    for (let i = 0, l1 = visibleLeaves.length; i < l1; i++) {
+        const node = visibleLeaves[i];
+        const { name } = node.data;
+        const y = node.x - quarterRowHeight;
+        const str = columns.get(name)?.slice(xStart, xEnd);
+        if (!str) {
+            continue;
+        }
+        for (let j = 0, l2 = str.length; j < l2; j++) {
+            const letter = str[j];
+            const isMatchingReference = referenceSeq && name !== relativeTo && letter === referenceSeq[j];
+            ctx.fillText(isMatchingReference ? '.' : letter, j * colWidth + offsetXAligned + halfColWidth, y);
         }
     }
 }

package/dist/components/msa/renderMSABlock.js.map

@@ -1 +1 @@
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+{"version":3,"file":"renderMSABlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSABlock.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AACxD,OAAO,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAA;AACtD,OAAO,EAAE,sBAAsB,EAAE,MAAM,eAAe,CAAA;AAQtD,MAAM,UAAU,cAAc,CAAC,EAC7B,KAAK,EACL,OAAO,EACP,OAAO,EACP,cAAc,EACd,GAAG,EACH,KAAK,EACL,0BAA0B,EAC1B,kBAAkB,EAClB,kBAAkB,GAWnB;IACC,MAAM,EACJ,QAAQ,EACR,SAAS,EACT,SAAS,EACT,QAAQ,EACR,kBAAkB,EAClB,mBAAmB,EACnB,OAAO,GACR,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAC1D,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,SAAS,GAAG,CAAC,GAAG,OAAO,CAAC,CAAA;IAChD,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;IACxB,uEAAuE;IACvE,2EAA2E;IAC3E,+CAA+C;IAC/C,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC,OAAO,CACzB,iBAAiB,EACjB,GAAG,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,GAAG,QAAQ,IAAI,CACzC,CAAA;IAED,MAAM,EAAE,MAAM,EAAE,IAAI,EAAE,GAAG,eAAe,CAAC;QACvC,OAAO;QACP,UAAU,EAAE,EAAE;QACd,QAAQ;KACT,CAAC,CAAA;IACF,MAAM,aAAa,GAAG,gBAAgB,CAAC,EAAE,KAAK,EAAE,OAAO,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC,CAAA;IAC1E,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IACrC,MAAM,YAAY,GAAG,UAAU;QAC7B,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,UAAU,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC;QAC9C,CAAC,CAAC,IAAI,CAAA;IAER,IAAI,CAAC,mBAAmB,EAAE,CAAC;QACzB,gBAAgB,CAAC;YACf,KAAK;YACL,GAAG;YACH,KAAK;YACL,cAAc;YACd,OAAO;YACP,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;SAAM,CAAC;QACN,QAAQ,CAAC;YACP,KAAK;YACL,GAAG;YACH,OAAO;YACP,MAAM;YACN,IAAI;YACJ,aAAa;YACb,YAAY;SACb,CAAC,CAAA;IACJ,CAAC;IACD,uBAAuB,CAAC;QACtB,KAAK;QACL,GAAG;QACH,MAAM;QACN,IAAI;QACJ,aAAa;KACd,CAAC,CAAA;IACF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,SAAS,gBAAgB,CAAC,EACxB,KAAK,EACL,OAAO,EACP,GAAG,EACH,KAAK,EACL,cAAc,EACd,aAAa,EACb,MAAM,EACN,IAAI,EACJ,YAAY,GAWb;IACC,MAAM,EACJ,OAAO,EACP,eAAe,EACf,WAAW,EACX,OAAO,EACP,QAAQ,EACR,SAAS,EACT,UAAU,EACV,cAAc,GACf,GAAG,KAAK,CAAA;IAET,MAAM,UAAU,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACjE,MAAM,iBAAiB,GAAG,eAAe,KAAK,0BAA0B,CAAA;IACxE,MAAM,WAAW,GAAG,OAAO,IAAI,UAAU,IAAI,iBAAiB,CAAA;IAC9D,IAAI,CAAC,WAAW,IAAI,CAAC,cAAc,EAAE,CAAC;QACpC,OAAM;IACR,CAAC;IACD,MAAM,cAAc,GAAG,OAAO,GAAG,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAA;IACrD,MAAM,YAAY,GAAG,QAAQ,GAAG,CAAC,CAAA;IACjC,MAAM,gBAAgB,GAAG,SAAS,GAAG,CAAC,CAAA;IAEtC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,aAAa,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;QACvD,MAAM,IAAI,GAAG,aAAa,CAAC,CAAC,CAAE,CAAA;QAC9B,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,CAAA;QAC1B,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QACjB,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,SAAQ;QACV,CAAC;QACD,MAAM,KAAK,GAAG,CAAC,GAAG,SAAS,CAAA;QAC3B,MAAM,KAAK,GAAG,CAAC,GAAG,gBAAgB,CAAA;QAElC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;YAC7C,MAAM,MAAM,GAAG,GAAG,CAAC,CAAC,CAAE,CAAA;YACtB,MAAM,CAAC,GAAG,CAAC,GAAG,QAAQ,GAAG,cAAc,CAAA;YACvC,MAAM,mBAAmB,GACvB,YAAY,IAAI,IAAI,KAAK,UAAU,IAAI,MAAM,KAAK,YAAY,CAAC,CAAC,CAAC,CAAA;YAEnE,IAAI,KAAyB,CAAA;YAC7B,IAAI,UAAU,EAAE,CAAC;gBACf,KAAK,GAAG,KAAK,CAAC,WAAW,CAAC,MAAM,GAAG,CAAC,CAAE,CAAC,MAAM,CAAC,CAAA;YAChD,CAAC;iBAAM,IAAI,iBAAiB,EAAE,CAAC;gBAC7B,MAAM,SAAS,GAAG,KAAK,CAAC,YAAY,CAAC,MAAM,GAAG,CAAC,CAAE,CAAA;gBACjD,KAAK,GAAG,MAAM,KAAK,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,SAAS,CAAA;YACnE,CAAC;iBAAM,CAAC;gBACN,KAAK,GAAG,WAAW,CAAC,MAAM,CAAC,CAAA;YAC7B,CAAC;YAED,IAAI,WAAW,EAAE,CAAC;gBAChB,GAAG,CAAC,SAAS,GAAG,mBAAmB;oBACjC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK;oBAC5B,CAAC,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO,CAAA;gBAC7C,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAE,SAAS,CAAC,CAAA;YAC7C,CAAC;YAED,IAAI,cAAc,EAAE,CAAC;gBACnB,GAAG,CAAC,SAAS,GAAG,OAAO;oBACrB,CAAC,CAAC,CAAC,cAAc,CAAC,MAAM,CAAC,IAAI,OAAO,CAAC;oBACrC,CAAC,CAAC,KAAK;wBACL,CAAC,CAAC,sBAAsB,CAAC,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO,CAAC;wBACjE,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAA;gBAChC,GAAG,CAAC,QAAQ,CACV,mBAAmB,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,EAClC,CAAC,GAAG,YAAY,EAChB,KAAK,CACN,CAAA;YACH,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC;AAED,qFAAqF;AACrF,qCAAqC;AACrC,SAAS,QAAQ,CAAC,EAChB,KAAK,EACL,OAAO,EACP,GAAG,EACH,aAAa,EACb,MAAM,EACN,IAAI,EACJ,YAAY,GASb;IACC,MAAM,EAAE,cAAc,EAAE,OAAO,EAAE,QAAQ,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,KAAK,CAAA;IAE1E,IAAI,CAAC,cAAc,EAAE,CAAC;QACpB,OAAM;IACR,CAAC;IACD,MAAM,cAAc,GAAG,OAAO,GAAG,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAA;IACrD,MAAM,YAAY,GAAG,QAAQ,GAAG,CAAC,CAAA;IACjC,MAAM,gBAAgB,GAAG,SAAS,GAAG,CAAC,CAAA;IACtC,kDAAkD;IAClD,GAAG,CAAC,SAAS,GAAG,OAAO,CAAA;IAEvB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,aAAa,CAAC,MAAM,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;QACvD,MAAM,IAAI,GAAG,aAAa,CAAC,CAAC,CAAE,CAAA;QAC9B,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,CAAA;QAC1B,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,GAAG,gBAAgB,CAAA;QACpC,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,M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package/dist/components/msa/renderMSAMouseover.js

@@ -3,13 +3,13 @@ const highlightColor = 'rgba(128,128,0,0.2)';
 const referenceColor = 'rgba(0,128,255,0.3)'; // Blue highlight for reference row
 const multiRowHoverColor = 'rgba(255,165,0,0.15)'; // Orange highlight for multi-row tree hover
 export function renderMouseover({ ctx, model, }) {
-    const { mouseCol, colWidth, msaAreaWidth, verticalScrollbarWidth, height, rowHeight, scrollX, scrollY, mouseRow, mouseClickRow, mouseClickCol, relativeTo, rowNamesSet, hoveredTreeNode, highlightedColumns, } = model;
+    const { mouseCol, colWidth, msaAreaWidth, verticalScrollbarWidth, height, rowHeight, scrollX, scrollY, mouseRow, mouseClickRow, mouseClickCol, relativeTo, hoveredTreeNode, highlightedColumns, } = model;
     const width = msaAreaWidth - verticalScrollbarWidth;
     ctx.resetTransform();
     ctx.clearRect(0, 0, width, height);
     // Highlight reference row (relativeTo) persistently
     if (relativeTo) {
-        const referenceRowIndex = rowNamesSet.get(relativeTo);
+        const referenceRowIndex = model.rowNamesSet.get(relativeTo);
         if (referenceRowIndex !== undefined) {
             ctx.fillStyle = referenceColor;
             ctx.fillRect(0, referenceRowIndex * rowHeight + scrollY, width, rowHeight);
@@ -19,7 +19,7 @@ export function renderMouseover({ ctx, model, }) {
     if (hoveredTreeNode) {
         ctx.fillStyle = multiRowHoverColor;
         for (const descendantName of hoveredTreeNode.descendantNames) {
-            const rowIndex = rowNamesSet.get(descendantName);
+            const rowIndex = model.rowNamesSet.get(descendantName);
             if (rowIndex !== undefined) {
                 ctx.fillRect(0, rowIndex * rowHeight + scrollY, width, rowHeight);
             }

package/dist/components/msa/renderMSAMouseover.js.map

@@ -1 +1 @@
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package/dist/components/msa/visibleColRange.d.ts

@@ -0,0 +1,8 @@
+export declare function visibleColRange({ offsetX, blockWidth, colWidth, }: {
+    offsetX: number;
+    blockWidth: number;
+    colWidth: number;
+}): {
+    xStart: number;
+    xEnd: number;
+};

package/dist/components/msa/visibleColRange.js

@@ -0,0 +1,10 @@
+// The half-open range of alignment columns [xStart, xEnd) intersecting a block
+// of width blockWidth at horizontal offset offsetX. X-axis counterpart to
+// getVisibleLeaves.
+export function visibleColRange({ offsetX, blockWidth, colWidth, }) {
+    return {
+        xStart: Math.max(0, Math.floor(offsetX / colWidth)),
+        xEnd: Math.max(0, Math.ceil((offsetX + blockWidth) / colWidth)),
+    };
+}
+//# sourceMappingURL=visibleColRange.js.map

package/dist/components/msa/visibleColRange.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"visibleColRange.js","sourceRoot":"","sources":["../../../src/components/msa/visibleColRange.ts"],"names":[],"mappings":"AAAA,+EAA+E;AAC/E,0EAA0E;AAC1E,oBAAoB;AACpB,MAAM,UAAU,eAAe,CAAC,EAC9B,OAAO,EACP,UAAU,EACV,QAAQ,GAKT;IACC,OAAO;QACL,MAAM,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAC;QACnD,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,GAAG,UAAU,CAAC,GAAG,QAAQ,CAAC,CAAC;KAChE,CAAA;AACH,CAAC"}

package/dist/components/renderCtx.d.ts

@@ -0,0 +1,7 @@
+/**
+ * The subset of the canvas 2D API that the block renderers use. Both a real
+ * `CanvasRenderingContext2D` and the `@jbrowse/svgcanvas` `Context` (used for
+ * SVG export) satisfy this, so renderers can be typed against it without an
+ * `as any` cast at the SVG-export boundary.
+ */
+export type RenderCtx = Pick<CanvasRenderingContext2D, 'arc' | 'beginPath' | 'clearRect' | 'fill' | 'fillRect' | 'fillStyle' | 'fillText' | 'font' | 'lineTo' | 'lineWidth' | 'measureText' | 'moveTo' | 'resetTransform' | 'scale' | 'setLineDash' | 'stroke' | 'strokeRect' | 'strokeStyle' | 'textAlign' | 'translate'>;

package/dist/components/renderCtx.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=renderCtx.js.map

package/dist/components/renderCtx.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"renderCtx.js","sourceRoot":"","sources":["../../src/components/renderCtx.ts"],"names":[],"mappings":""}

package/dist/components/tracks/renderTracksSvg.d.ts

@@ -1,7 +1,8 @@
 import type { MsaViewModel } from '../../model.ts';
 import type { BasicTrack } from '../../types.ts';
+import type { RenderCtx } from '../renderCtx.ts';
 export declare function drawConservationBars({ ctx, conservation, colWidth, trackHeight, offsetX, blockSize, }: {
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     conservation: number[];
     colWidth: number;
     trackHeight: number;
@@ -9,7 +10,7 @@ export declare function drawConservationBars({ ctx, conservation, colWidth, trac
     blockSize: number;
 }): void;
 export declare function drawTextTrackContent({ ctx, data, colorScheme, contrastScheme, bgColor, colWidth, rowHeight, offsetX, blockSize, }: {
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     data: string | undefined;
     colorScheme: Record<string, string>;
     contrastScheme: Record<string, string>;
@@ -21,7 +22,7 @@ export declare function drawTextTrackContent({ ctx, data, colorScheme, contrastS
 }): void;
 export declare function renderConservationTrack({ model, ctx, offsetX, offsetY, trackHeight, blockSizeXOverride, highResScaleFactorOverride, }: {
     model: MsaViewModel;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     offsetX: number;
     offsetY: number;
     trackHeight: number;
@@ -30,7 +31,7 @@ export declare function renderConservationTrack({ model, ctx, offsetX, offsetY,
 }): void;
 export declare function renderTextTrack({ model, ctx, track, offsetX, offsetY, contrastScheme, blockSizeXOverride, highResScaleFactorOverride, }: {
     model: MsaViewModel;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     track: BasicTrack;
     offsetX: number;
     offsetY: number;
@@ -40,7 +41,7 @@ export declare function renderTextTrack({ model, ctx, track, offsetX, offsetY, c
 }): void;
 export declare function renderAllTracks({ model, ctx, offsetX, contrastScheme, blockSizeXOverride, highResScaleFactorOverride, }: {
     model: MsaViewModel;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     offsetX: number;
     contrastScheme: Record<string, string>;
     blockSizeXOverride?: number;

package/dist/components/tracks/renderTracksSvg.js

@@ -1,6 +1,10 @@
+import { visibleColRange } from "../msa/visibleColRange.js";
 export function drawConservationBars({ ctx, conservation, colWidth, trackHeight, offsetX, blockSize, }) {
-    const xStart = Math.max(0, Math.floor(offsetX / colWidth));
-    const xEnd = Math.max(0, Math.ceil((offsetX + blockSize) / colWidth));
+    const { xStart, xEnd } = visibleColRange({
+        offsetX,
+        blockWidth: blockSize,
+        colWidth,
+    });
     ctx.fillStyle = 'gray';
     for (let i = xStart; i < xEnd && i < conservation.length; i++) {
         const value = conservation[i];
@@ -10,8 +14,11 @@ export function drawConservationBars({ ctx, conservation, colWidth, trackHeight,
     }
 }
 export function drawTextTrackContent({ ctx, data, colorScheme, contrastScheme, bgColor, colWidth, rowHeight, offsetX, blockSize, }) {
-    const xStart = Math.max(0, Math.floor(offsetX / colWidth));
-    const xEnd = Math.max(0, Math.ceil((offsetX + blockSize) / colWidth));
+    const { xStart, xEnd } = visibleColRange({
+        offsetX,
+        blockWidth: blockSize,
+        colWidth,
+    });
     const str = data?.slice(xStart, xEnd);
     for (let i = 0; str && i < str.length; i++) {
         const letter = str[i];

package/dist/components/tracks/renderTracksSvg.js.map

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package/dist/components/tree/TreeCanvas.js.map

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+{"version":3,"file":"TreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AAE7D,OAAO,EAAE,OAAO,EAAE,MAAM,0BAA0B,CAAA;AAClD,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC9B,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,eAAe,MAAM,sBAAuB,CAAA;AACnD,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAA;AAC/C,OAAO,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAA;AAIxD,MAAM,cAAc,GAAG,qBAAqB,CAAA;AAC5C,MAAM,cAAc,GAAG,qBAAqB,CAAA;AAE5C,MAAM,UAAU,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACtE,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,YAAY,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IACpD,MAAM,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAC3D,MAAM,SAAS,GAAG,WAAW,CAC3B,CAAC,CAAS,EAAE,EAAE;QACZ,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,CAAA;IACpB,CAAC,EACD,CAAC,KAAK,CAAC,CACR,CAAA;IACD,MAAM,EAAE,WAAW,EAAE,SAAS,EAAE,GAAG,cAAc,CAAC,EAAE,GAAG,EAAE,SAAS,EAAE,CAAC,CAAA;IAErE,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,YAAY,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QAClD,OAAO,GAAG;YACR,CAAC,CAAC,OAAO,CAAC,GAAG,EAAE;gBACX,IAAI,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;oBACnB,MAAM,EACJ,UAAU,EACV,MAAM,EACN,SAAS,EACT,eAAe,EACf,aAAa,EAAE,CAAC,EAChB,MAAM,EAAE,CAAC,EACT,OAAO,EAAE,EAAE,EACX,gBAAgB,GACjB,GAAG,KAAK,CAAA;oBACT,GAAG,CAAC,cAAc,EAAE,CAAA;oBACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAA;oBAEzB,MAAM,UAAU,GAAG,IAAI,GAAG,CACxB,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAC3C,CAAA;oBACD,MAAM,OAAO,GAAG,CAAC,IAAY,EAAE,EAAE;wBAC/B,MAAM,IAAI,GAAG,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,CAAA;wBACjC,IAAI,IAAI,EAAE,CAAC;4BACT,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,IAAI,CAAC,CAAE,GAAG,EAAE,GAAG,SAAS,GAAG,CAAC,EAAE,CAAC,EAAE,SAAS,CAAC,CAAA;wBAC7D,CAAC;oBACH,CAAC,CAAA;oBAED,IAAI,UAAU,EAAE,CAAC;wBACf,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;wBAC9B,OAAO,CAAC,UAAU,CAAC,CAAA;oBACrB,CAAC;oBAED,IAAI,eAAe,EAAE,CAAC;wBACpB,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;wBAC9B,KAAK,MAAM,cAAc,IAAI,eAAe,CAAC,eAAe,EAAE,CAAC;4BAC7D,OAAO,CAAC,cAAc,CAAC,CAAA;wBACzB,CAAC;oBACH,CAAC;oBAED,IACE,gBAAgB;wBAChB,gBAAgB,KAAK,UAAU;wBAC/B,CAAC,eAAe,EAAE,eAAe,CAAC,QAAQ,CAAC,gBAAgB,CAAC,EAC5D,CAAC;wBACD,GAAG,CAAC,SAAS,GAAG,cAAc,CAAA;wBAC9B,OAAO,CAAC,gBAAgB,CAAC,CAAA;oBAC3B,CAAC;gBACH,CAAC;YACH,CAAC,CAAC;YACJ,CAAC,CAAC,SAAS,CAAA;IACf,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,CAAA;IAEX,OAAO,CACL,6BACE,GAAG,EAAE,GAAG,EACR,WAAW,EAAE,WAAW,EACxB,SAAS,EAAE,SAAS,EACpB,YAAY,EAAE,KAAK,CAAC,EAAE;YACpB,KAAK,CAAC,cAAc,EAAE,CAAA;QACxB,CAAC,EACD,KAAK,EAAE;YACL,MAAM;YACN,QAAQ,EAAE,UAAU;YACpB,KAAK,EAAE,SAAS,GAAG,OAAO;SAC3B;QAEA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CACpB,oBAAC,eAAe,IAAC,GAAG,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,KAAK,GAAI,CAC9D,CAAC;QACF,gCACE,GAAG,EAAE,YAAY,EACjB,KAAK,EAAE,aAAa,EACpB,MAAM,EAAE,MAAM,EACd,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI,EAAE,CAAC;gBACP,KAAK,EAAE,aAAa;gBACpB,MAAM;gBACN,MAAM,EAAE,IAAI;gBACZ,aAAa,EAAE,MAAM;aACtB,GACD,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,UAAU,CAAA"}

package/dist/components/tree/TreeCanvasBlock.js

@@ -1,4 +1,4 @@
-import React, { useCallback, useEffect, useRef, useState } from 'react';
+import React, { useEffect, useRef, useState } from 'react';
 import { useTheme } from '@mui/material';
 import Flatbush from 'flatbush';
 import { autorun } from 'mobx';
@@ -36,7 +36,6 @@ class ClickMapIndex {
     finish() {
         if (this.entries.length === 0) {
             this.flatbush = null;
-            return;
         }
         else {
             this.flatbush = new Flatbush(this.entries.length);
@@ -67,13 +66,6 @@ const TreeCanvasBlock = observer(function ({ model, offsetY, }) {
     const height = blockSize;
     const w2 = width * highResScaleFactor;
     const h2 = height * highResScaleFactor;
-    // biome-ignore lint/correctness/useExhaustiveDependencies:
-    const vref = useCallback((arg) => {
-        model.incrementRef();
-        ref.current = arg;
-    }, 
-    // eslint-disable-next-line react-hooks/exhaustive-deps
-    [model, height, width]);
     useEffect(() => {
         const ctx = ref.current?.getContext('2d');
         if (!ctx) {
@@ -198,7 +190,7 @@ const TreeCanvasBlock = observer(function ({ model, offsetY, }) {
                 // Clear all highlighting when leaving tree area
                 model.setHoveredTreeNode(undefined);
                 model.setMousePos(undefined, undefined);
-            }, ref: vref }),
+            }, ref: ref }),
         React.createElement("canvas", { style: {
                 ...style,
                 pointerEvents: 'none',

package/dist/components/tree/TreeCanvasBlock.js.map

@@ -1 +1 @@
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+{"version":3,"file":"TreeCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvasBlock.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE1D,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AACxC,OAAO,QAAQ,MAAM,UAAU,CAAA;AAC/B,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC9B,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAE1C,OAAO,cAAc,MAAM,qBAAsB,CAAA;AACjD,OAAO,YAAY,MAAM,mBAAoB,CAAA;AAC7C,OAAO,EAAE,OAAO,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AAIjE,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,OAAO,EAAE;QACP,QAAQ,EAAE,OAAO;QACjB,aAAa,EAAE,MAAM;QACrB,MAAM,EAAE,KAAK;QACb,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;QACxC,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK;QACjC,OAAO,EAAE,SAAS;QAClB,YAAY,EAAE,CAAC;QACf,QAAQ,EAAE,EAAE;QACZ,UAAU,EAAE,QAAQ;QACpB,QAAQ,EAAE,GAAG;QACb,QAAQ,EAAE,QAAQ;QAClB,YAAY,EAAE,UAAU;KACzB;CACF,CAAC,CAAC,CAAA;AAmBH,MAAM,aAAa;IACT,QAAQ,GAAoB,IAAI,CAAA;IAChC,OAAO,GAAiB,EAAE,CAAA;IAElC,KAAK;QACH,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAA;QACpB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;IACnB,CAAC;IAED,MAAM,CAAC,KAAiB;QACtB,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAA;IAC1B,CAAC;IAED,MAAM;QACJ,IAAI,IAAI,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC9B,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAA;QACtB,CAAC;aAAM,CAAC;YACN,IAAI,CAAC,QAAQ,GAAG,IAAI,QAAQ,CAAC,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,CAAA;YACjD,KAAK,MAAM,KAAK,IAAI,IAAI,CAAC,OAAO,EAAE,CAAC;gBACjC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,CAAA;YACnE,CAAC;YACD,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAA;QACxB,CAAC;IACH,CAAC;IAED,MAAM,CAAC,GAKN;QACC,OAAO,CACL,IAAI,CAAC,QAAQ;YACX,EAAE,MAAM,CAAC,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,EAAE,GAAG,CAAC,IAAI,CAAC;aAC/C,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAE,CAAC,IAAI,EAAE,CACpC,CAAA;IACH,CAAC;CACF;AAED,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,OAAO,GAIR;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,KAAK,GAAG,QAAQ,EAAE,CAAA;IACxB,MAAM,GAAG,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IAC3C,MAAM,QAAQ,GAAG,MAAM,CAAC,IAAI,aAAa,EAAE,CAAC,CAAA;IAC5C,MAAM,YAAY,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IACpD,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,QAAQ,EAAe,CAAA;IAC3D,MAAM,CAAC,cAAc,EAAE,iBAAiB,CAAC,GAAG,QAAQ,EAAe,CAAA;IACnE,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,EAAc,CAAA;IACtD,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,EAI1C,CAAA;IAEJ,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IAEvE,MAAM,KAAK,GAAG,aAAa,GAAG,OAAO,CAAA;IACrC,MAAM,MAAM,GAAG,SAAS,CAAA;IACxB,MAAM,EAAE,GAAG,KAAK,GAAG,kBAAkB,CAAA;IACrC,MAAM,EAAE,GAAG,MAAM,GAAG,kBAAkB,CAAA;IAEtC,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QACzC,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QAED,OAAO,OAAO,CAAC,GAAG,EAAE;YAClB,GAAG,CAAC,cAAc,EAAE,CAAA;YACpB,GAAG,CAAC,SAAS,CACX,CAAC,EACD,CAAC,EACD,CAAC,aAAa,GAAG,OAAO,CAAC,GAAG,kBAAkB,EAC9C,SAAS,GAAG,kBAAkB,CAC/B,CAAA;YACD,gBAAgB,CAAC;gBACf,GAAG;gBACH,KAAK;gBACL,OAAO;gBACP,QAAQ,EAAE,QAAQ,CAAC,OAAO;gBAC1B,KAAK;aACN,CAAC,CAAA;QACJ,CAAC,CAAC,CAAA;IACJ,CAAC,EAAE,CAAC,KAAK,EAAE,SAAS,EAAE,kBAAkB,EAAE,aAAa,EAAE,OAAO,EAAE,KAAK,CAAC,CAAC,CAAA;IAEzE,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,YAAY,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QAED,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,aAAa,GAAG,OAAO,EAAE,SAAS,CAAC,CAAA;QACvD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,CAAA;QAE1B,gDAAgD;QAChD,IAAI,QAAQ,EAAE,CAAC;YACb,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,QAAQ,CAAA;YAE3C,GAAG,CAAC,SAAS,GAAG,iBAAiB,CAAA;YACjC,GAAG,CAAC,QAAQ,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,GAAG,IAAI,EAAE,IAAI,GAAG,IAAI,CAAC,CAAA;QACpD,CAAC;IACH,CAAC,EAAE,CAAC,QAAQ,EAAE,OAAO,EAAE,SAAS,EAAE,aAAa,CAAC,CAAC,CAAA;IAEjD,SAAS,mBAAmB,CAAC,KAAuB;QAClD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QAEnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,EAAE,MAAM;YAClB,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IAED,SAAS,iBAAiB,CAAC,KAAuB;QAChD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,IAAI,CAAC,KAAK,CAAC,MAAM;YAC3B,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IACD,MAAM,KAAK,GAAG;QACZ,KAAK;QACL,MAAM;QACN,GAAG,EAAE,OAAO,GAAG,OAAO;QACtB,IAAI,EAAE,CAAC;QACP,QAAQ,EAAE,UAAU;KACZ,CAAA;IACV,OAAO,CACL;QACG,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAChB,oBAAC,cAAc,IACb,IAAI,EAAE,UAA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package/dist/components/tree/renderTreeCanvas.d.ts

@@ -1,4 +1,5 @@
 import type { MsaViewModel } from '../../model.ts';
+import type { RenderCtx } from '../renderCtx.ts';
 import type { Theme } from '@mui/material';
 export declare const padding = 600;
 interface ClickEntry {
@@ -23,7 +24,7 @@ interface ClickMapIndex {
 }
 export declare function renderTree({ offsetY, ctx, model, theme, maxBranchLen, maxDepthToLeaf, blockSizeYOverride, }: {
     offsetY: number;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     model: MsaViewModel;
     theme: Theme;
     maxBranchLen: number;
@@ -31,7 +32,7 @@ export declare function renderTree({ offsetY, ctx, model, theme, maxBranchLen, m
     blockSizeYOverride?: number;
 }): void;
 export declare function renderNodeBubbles({ ctx, clickMap, offsetY, model, maxBranchLen, maxDepthToLeaf, blockSizeYOverride, }: {
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     clickMap?: ClickMapIndex;
     offsetY: number;
     model: MsaViewModel;
@@ -42,7 +43,7 @@ export declare function renderNodeBubbles({ ctx, clickMap, offsetY, model, maxBr
 export declare function renderTreeLabels({ theme, model, offsetY, ctx, clickMap, maxBranchLen, maxDepthToLeaf, blockSizeYOverride, }: {
     model: MsaViewModel;
     offsetY: number;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     clickMap?: ClickMapIndex;
     theme: Theme;
     maxBranchLen: number;
@@ -52,7 +53,7 @@ export declare function renderTreeLabels({ theme, model, offsetY, ctx, clickMap,
 export declare function renderTreeCanvas({ model, clickMap, ctx, offsetY, theme, highResScaleFactorOverride, blockSizeYOverride, }: {
     model: MsaViewModel;
     offsetY: number;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     clickMap?: ClickMapIndex;
     theme: Theme;
     highResScaleFactorOverride?: number;