react-msaview 5.1.0 → 5.2.0

package/dist/calculateBlocks.d.ts

@@ -1,12 +1,6 @@
-export declare function blocksY({ mapHeight, blockSize, viewportY, viewportHeight, }: {
-    mapHeight: number;
+export declare function calculateBlocks({ mapSize, blockSize, viewportPos, viewportSize, }: {
+    mapSize: number;
     blockSize: number;
-    viewportY: number;
-    viewportHeight: number;
-}): number[];
-export declare function blocksX({ mapWidth, blockSize, viewportX, viewportWidth, }: {
-    mapWidth: number;
-    blockSize: number;
-    viewportX: number;
-    viewportWidth: number;
+    viewportPos: number;
+    viewportSize: number;
 }): number[];

package/dist/calculateBlocks.js

@@ -1,23 +1,15 @@
-export function blocksY({ mapHeight, blockSize, viewportY, viewportHeight, }) {
-    const clampedViewportY = Math.max(0, Math.min(viewportY, mapHeight * blockSize - viewportHeight));
-    // Calculate visible tile ranges
-    const minTileY = Math.floor(clampedViewportY / blockSize);
-    const maxTileY = Math.floor((clampedViewportY + viewportHeight - 1) / blockSize);
-    // Generate list of visible tiles
-    const blocksY = [];
-    for (let tileY = minTileY; tileY <= maxTileY; tileY++) {
-        blocksY.push(tileY * blockSize);
+// Returns the block offsets (in pixels) needed to cover the viewport along one
+// axis. mapSize/viewportPos/viewportSize are all in pixels. The clamp pins the
+// block set to the content edge so an over-scroll past the end still fills the
+// viewport rather than leaving a gap.
+export function calculateBlocks({ mapSize, blockSize, viewportPos, viewportSize, }) {
+    const clamped = Math.max(0, Math.min(viewportPos, mapSize - viewportSize));
+    const minTile = Math.floor(clamped / blockSize);
+    const maxTile = Math.floor((clamped + viewportSize - 1) / blockSize);
+    const blocks = [];
+    for (let tile = minTile; tile <= maxTile; tile++) {
+        blocks.push(tile * blockSize);
     }
-    return blocksY;
-}
-export function blocksX({ mapWidth, blockSize, viewportX, viewportWidth, }) {
-    const clampedViewportX = Math.max(0, Math.min(viewportX, mapWidth - viewportWidth));
-    const minTileX = Math.floor(clampedViewportX / blockSize);
-    const maxTileX = Math.floor((clampedViewportX + viewportWidth - 1) / blockSize);
-    const blocksX = [];
-    for (let tileX = minTileX; tileX <= maxTileX; tileX++) {
-        blocksX.push(tileX * blockSize);
-    }
-    return blocksX;
+    return blocks;
 }
 //# sourceMappingURL=calculateBlocks.js.map

package/dist/calculateBlocks.js.map

@@ -1 +1 @@
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package/dist/components/ConservationTrack.js

@@ -1,38 +1,32 @@
 import React, { useEffect, useRef } from 'react';
 import { ResizeHandle } from '@jbrowse/core/ui';
+import { autorun } from 'mobx';
 import { observer } from 'mobx-react';
 import { drawConservationBars } from "./tracks/renderTracksSvg.js";
 const ConservationBlock = observer(function ({ model, offsetX, trackHeight, }) {
-    const { blockSize, scrollX, colWidth, highResScaleFactor, conservation } = model;
+    const { blockSize, scrollX, highResScaleFactor } = model;
     const ref = useRef(null);
     useEffect(() => {
-        if (!ref.current) {
-            return;
-        }
-        const ctx = ref.current.getContext('2d');
+        const ctx = ref.current?.getContext('2d');
         if (!ctx) {
             return;
         }
-        ctx.resetTransform();
-        ctx.scale(highResScaleFactor, highResScaleFactor);
-        ctx.clearRect(0, 0, blockSize, trackHeight);
-        ctx.translate(-offsetX, 0);
-        drawConservationBars({
-            ctx,
-            conservation,
-            colWidth,
-            trackHeight,
-            offsetX,
-            blockSize,
+        return autorun(() => {
+            const { blockSize, colWidth, highResScaleFactor, conservation } = model;
+            ctx.resetTransform();
+            ctx.scale(highResScaleFactor, highResScaleFactor);
+            ctx.clearRect(0, 0, blockSize, trackHeight);
+            ctx.translate(-offsetX, 0);
+            drawConservationBars({
+                ctx,
+                conservation,
+                colWidth,
+                trackHeight,
+                offsetX,
+                blockSize,
+            });
         });
-    }, [
-        blockSize,
-        colWidth,
-        trackHeight,
-        offsetX,
-        highResScaleFactor,
-        conservation,
-    ]);
+    }, [model, offsetX, trackHeight]);
     return (React.createElement("canvas", { ref: ref, height: trackHeight * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
             position: 'absolute',
             left: scrollX + offsetX,

package/dist/components/ConservationTrack.js.map

@@ -1 +1 @@
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package/dist/components/TextTrack.js

@@ -1,50 +1,40 @@
 import React, { useEffect, useRef } from 'react';
+import { autorun } from 'mobx';
 import { observer } from 'mobx-react';
 import { useColorContrast } from "../useColorContrast.js";
 import { drawTextTrackContent } from "./tracks/renderTracksSvg.js";
 const AnnotationBlock = observer(function ({ track, model, offsetX, }) {
-    const { blockSize, scrollX, bgColor, colorScheme: modelColorScheme, colWidth, fontSize, rowHeight, highResScaleFactor, } = model;
+    const { blockSize, scrollX, colorScheme: modelColorScheme, rowHeight, highResScaleFactor, } = model;
     const { model: { customColorScheme, data }, } = track;
-    const colorScheme = customColorScheme || modelColorScheme;
+    const colorScheme = customColorScheme ?? modelColorScheme;
     const ref = useRef(null);
     const { contrastScheme } = useColorContrast(colorScheme);
     useEffect(() => {
-        if (!ref.current) {
-            return;
-        }
-        const ctx = ref.current.getContext('2d');
+        const ctx = ref.current?.getContext('2d');
         if (!ctx) {
             return;
         }
-        ctx.resetTransform();
-        ctx.scale(highResScaleFactor, highResScaleFactor);
-        ctx.clearRect(0, 0, blockSize, rowHeight);
-        ctx.translate(-offsetX, 0);
-        ctx.textAlign = 'center';
-        ctx.font = ctx.font.replace(/\d+px/, `${fontSize}px`);
-        drawTextTrackContent({
-            ctx,
-            data,
-            colorScheme,
-            contrastScheme,
-            bgColor,
-            colWidth,
-            rowHeight,
-            offsetX,
-            blockSize,
+        return autorun(() => {
+            const { blockSize, bgColor, colWidth, fontSize, rowHeight, highResScaleFactor, } = model;
+            ctx.resetTransform();
+            ctx.scale(highResScaleFactor, highResScaleFactor);
+            ctx.clearRect(0, 0, blockSize, rowHeight);
+            ctx.translate(-offsetX, 0);
+            ctx.textAlign = 'center';
+            ctx.font = ctx.font.replace(/\d+px/, `${fontSize}px`);
+            drawTextTrackContent({
+                ctx,
+                data,
+                colorScheme,
+                contrastScheme,
+                bgColor,
+                colWidth,
+                rowHeight,
+                offsetX,
+                blockSize,
+            });
         });
-    }, [
-        fontSize,
-        bgColor,
-        blockSize,
-        colWidth,
-        rowHeight,
-        offsetX,
-        contrastScheme,
-        colorScheme,
-        highResScaleFactor,
-        data,
-    ]);
+    }, [model, offsetX, contrastScheme, colorScheme, data]);
     return (React.createElement("canvas", { ref: ref, height: rowHeight * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
             position: 'absolute',
             left: scrollX + offsetX,

package/dist/components/TextTrack.js.map

@@ -1 +1 @@
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+{"version":3,"file":"TextTrack.js","sourceRoot":"","sources":["../../src/components/TextTrack.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AAEhD,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC9B,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAA;AACzD,OAAO,EAAE,oBAAoB,EAAE,MAAM,6BAA6B,CAAA;AAKlE,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,KAAK,EACL,OAAO,GAKR;IACC,MAAM,EACJ,SAAS,EACT,OAAO,EACP,WAAW,EAAE,gBAAgB,EAC7B,SAAS,EACT,kBAAkB,GACnB,GAAG,KAAK,CAAA;IACT,MAAM,EACJ,KAAK,EAAE,EAAE,iBAAiB,EAAE,IAAI,EAAE,GACnC,GAAG,KAAK,CAAA;IAET,MAAM,WAAW,GAAG,iBAAiB,IAAI,gBAAgB,CAAA;IACzD,MAAM,GAAG,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IAC3C,MAAM,EAAE,cAAc,EAAE,GAAG,gBAAgB,CAAC,WAAW,CAAC,CAAA;IACxD,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QACzC,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QACD,OAAO,OAAO,CAAC,GAAG,EAAE;YAClB,MAAM,EACJ,SAAS,EACT,OAAO,EACP,QAAQ,EACR,QAAQ,EACR,SAAS,EACT,kBAAkB,GACnB,GAAG,KAAK,CAAA;YACT,GAAG,CAAC,cAAc,EAAE,CAAA;YACpB,GAAG,CAAC,KAAK,CAAC,kBAAkB,EAAE,kBAAkB,CAAC,CAAA;YACjD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,SAAS,EAAE,SAAS,CAAC,CAAA;YACzC,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,CAAC,CAAC,CAAA;YAC1B,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;YACxB,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO,EAAE,GAAG,QAAQ,IAAI,CAAC,CAAA;YAErD,oBAAoB,CAAC;gBACnB,GAAG;gBACH,IAAI;gBACJ,WAAW;gBACX,cAAc;gBACd,OAAO;gBACP,QAAQ;gBACR,SAAS;gBACT,OAAO;gBACP,SAAS;aACV,CAAC,CAAA;QACJ,CAAC,CAAC,CAAA;IACJ,CAAC,EAAE,CAAC,KAAK,EAAE,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,IAAI,CAAC,CAAC,CAAA;IACvD,OAAO,CACL,gCACE,GAAG,EAAE,GAAG,EACR,MAAM,EAAE,SAAS,GAAG,kBAAkB,EACtC,KAAK,EAAE,SAAS,GAAG,kBAAkB,EACrC,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,IAAI,EAAE,OAAO,GAAG,OAAO;YACvB,KAAK,EAAE,SAAS;YAChB,MAAM,EAAE,SAAS;SAClB,GACD,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AACF,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,KAAK,GAIN;IACC,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,GAAG,KAAK,CAAA;IAClD,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC;QACtB,OAAO,IAAI,CAAA;IACb,CAAC;IACD,OAAO,CACL,6BACE,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,SAAS;YACjB,KAAK,EAAE,YAAY;YACnB,QAAQ,EAAE,QAAQ;SACnB,IAEA,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CACjB,oBAAC,eAAe,IAAC,GAAG,EAAE,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,EAAE,GAAI,CACtE,CAAC,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,eAAe,CAAA"}

package/dist/components/dialogs/ExportSVGDialog.js

@@ -8,10 +8,10 @@ export default function ExportSVGDialog({ model, onClose, }) {
     const [exportType, setExportType] = useState('viewport');
     const [error, setError] = useState();
     const theme = useTheme();
-    const { totalWidth, totalHeight, treeAreaWidth, turnedOnTracks } = model;
+    const { totalWidth, totalHeight, treeAreaWidth, turnedOnTracks, totalTrackAreaHeight, } = model;
     const hasTracks = turnedOnTracks.length > 0;
     const entireWidth = totalWidth + treeAreaWidth;
-    const entireHeight = totalHeight;
+    const entireHeight = totalHeight + (includeTracks ? totalTrackAreaHeight : 0);
     const isLargeExport = exportType === 'entire' && (entireWidth > 10000 || entireHeight > 10000);
     return (React.createElement(Dialog, { onClose: () => {
             onClose();
@@ -29,7 +29,10 @@ export default function ExportSVGDialog({ model, onClose, }) {
                 React.createElement(FormControl, null,
                     React.createElement(FormLabel, null, "Export type"),
                     React.createElement(RadioGroup, { value: exportType, onChange: event => {
-                            setExportType(event.target.value);
+                            const { value } = event.target;
+                            if (value === 'entire' || value === 'viewport') {
+                                setExportType(value);
+                            }
                         } },
                         React.createElement(FormControlLabel, { value: "entire", control: React.createElement(Radio, null), label: "Entire MSA" }),
                         React.createElement(FormControlLabel, { value: "viewport", control: React.createElement(Radio, null), label: "Current viewport only" })))),
@@ -41,23 +44,20 @@ export default function ExportSVGDialog({ model, onClose, }) {
                 " pixels). Export may be slow or fail.")) : null),
         React.createElement(DialogActions, null,
             React.createElement(Button, { variant: "contained", color: "primary", onClick: () => {
-                    // eslint-disable-next-line @typescript-eslint/no-floating-promises
-                    ;
-                    (async () => {
-                        try {
-                            await model.exportSVG({
-                                theme,
-                                includeMinimap: exportType === 'entire' ? false : includeMinimap,
-                                includeTracks: hasTracks && includeTracks,
-                                exportType,
-                            });
-                            onClose();
-                        }
-                        catch (e) {
-                            console.error(e);
-                            setError(e);
-                        }
-                    })();
+                    void model
+                        .exportSVG({
+                        theme,
+                        includeMinimap: exportType === 'entire' ? false : includeMinimap,
+                        includeTracks: hasTracks && includeTracks,
+                        exportType,
+                    })
+                        .then(() => {
+                        onClose();
+                    })
+                        .catch((e) => {
+                        console.error(e);
+                        setError(e);
+                    });
                 } }, "Submit"),
             React.createElement(Button, { variant: "contained", color: "secondary", onClick: () => {
                     onClose();

package/dist/components/dialogs/ExportSVGDialog.js.map

@@ -1 +1 @@
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+{"version":3,"file":"ExportSVGDialog.js","sourceRoot":"","sources":["../../../src/components/dialogs/ExportSVGDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,MAAM,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AACvD,OAAO,EACL,KAAK,EACL,MAAM,EACN,aAAa,EACb,aAAa,EACb,WAAW,EACX,gBAAgB,EAChB,SAAS,EACT,KAAK,EACL,UAAU,EACV,UAAU,EACV,QAAQ,GACT,MAAM,eAAe,CAAA;AAEtB,OAAO,SAAS,MAAM,iBAAkB,CAAA;AAIxC,MAAM,CAAC,OAAO,UAAU,eAAe,CAAC,EACtC,KAAK,EACL,OAAO,GAIR;IACC,MAAM,CAAC,cAAc,EAAE,iBAAiB,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAA;IAC1D,MAAM,CAAC,aAAa,EAAE,gBAAgB,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAA;IACxD,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,QAAQ,CAC1C,UAAU,CACX,CAAA;IACD,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,EAAW,CAAA;IAC7C,MAAM,KAAK,GAAG,QAAQ,EAAE,CAAA;IACxB,MAAM,EACJ,UAAU,EACV,WAAW,EACX,aAAa,EACb,cAAc,EACd,oBAAoB,GACrB,GAAG,KAAK,CAAA;IACT,MAAM,SAAS,GAAG,cAAc,CAAC,MAAM,GAAG,CAAC,CAAA;IAC3C,MAAM,WAAW,GAAG,UAAU,GAAG,aAAa,CAAA;IAC9C,MAAM,YAAY,GAAG,WAAW,GAAG,CAAC,aAAa,CAAC,CAAC,CAAC,oBAAoB,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;IAC7E,MAAM,aAAa,GACjB,UAAU,KAAK,QAAQ,IAAI,CAAC,WAAW,GAAG,KAAK,IAAI,YAAY,GAAG,KAAK,CAAC,CAAA;IAC1E,OAAO,CACL,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;YACZ,OAAO,EAAE,CAAA;QACX,CAAC,EACD,IAAI,QACJ,KAAK,EAAC,YAAY;QAElB,oBAAC,aAAa;YACX,KAAK,CAAC,CAAC,CAAC,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI;YAC9C,oBAAC,UAAU,oBAAuB;YAClC,oBAAC,SAAS,IACR,KAAK,EAAC,kBAAkB,EACxB,QAAQ,EAAE,UAAU,KAAK,QAAQ,EACjC,OAAO,EAAE,cAAc,EACvB,QAAQ,EAAE,GAAG,EAAE;oBACb,iBAAiB,CAAC,CAAC,cAAc,CAAC,CAAA;gBACpC,CAAC,GACD;YACD,SAAS,CAAC,CAAC,CAAC,CACX,oBAAC,SAAS,IACR,KAAK,EAAC,iBAAiB,EACvB,OAAO,EAAE,aAAa,EACtB,QAAQ,EAAE,GAAG,EAAE;oBACb,gBAAgB,CAAC,CAAC,aAAa,CAAC,CAAA;gBAClC,CAAC,GACD,CACH,CAAC,CAAC,CAAC,IAAI;YACR;gBACE,oBAAC,WAAW;oBACV,oBAAC,SAAS,sBAAwB;oBAClC,oBAAC,UAAU,IACT,KAAK,EAAE,UAAU,EACjB,QAAQ,EAAE,KAAK,CAAC,EAAE;4BAChB,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAC,MAAM,CAAA;4BAC9B,IAAI,KAAK,KAAK,QAAQ,IAAI,KAAK,KAAK,UAAU,EAAE,CAAC;gCAC/C,aAAa,CAAC,KAAK,CAAC,CAAA;4BACtB,CAAC;wBACH,CAAC;wBAED,oBAAC,gBAAgB,IACf,KAAK,EAAC,QAAQ,EACd,OAAO,EAAE,oBAAC,KAAK,OAAG,EAClB,KAAK,EAAC,YAAY,GAClB;wBACF,oBAAC,gBAAgB,IACf,KAAK,EAAC,UAAU,EAChB,OAAO,EAAE,oBAAC,KAAK,OAAG,EAClB,KAAK,EAAC,uBAAuB,GAC7B,CACS,CACD,CACV;YACL,aAAa,CAAC,CAAC,CAAC,CACf,oBAAC,KAAK,IAAC,QAAQ,EAAC,SAAS,EAAC,KAAK,EAAE,EAAE,SAAS,EAAE,CAAC,EAAE;;gBAChB,IAAI,CAAC,KAAK,CAAC,WAAW,CAAC;;gBACrD,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC;wDACnB,CACT,CAAC,CAAC,CAAC,IAAI,CACM;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,KAAK;yBACP,SAAS,CAAC;wBACT,KAAK;wBACL,cAAc,EACZ,UAAU,KAAK,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,cAAc;wBAClD,aAAa,EAAE,SAAS,IAAI,aAAa;wBACzC,UAAU;qBACX,CAAC;yBACD,IAAI,CAAC,GAAG,EAAE;wBACT,OAAO,EAAE,CAAA;oBACX,CAAC,CAAC;yBACD,KAAK,CAAC,CAAC,CAAU,EAAE,EAAE;wBACpB,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;wBAChB,QAAQ,CAAC,CAAC,CAAC,CAAA;oBACb,CAAC,CAAC,CAAA;gBACN,CAAC,aAGM;YACT,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,GAAG,EAAE;oBACZ,OAAO,EAAE,CAAA;gBACX,CAAC,aAGM,CACK,CACT,CACV,CAAA;AACH,CAAC"}

package/dist/components/dialogs/InterProScanDialog.js

@@ -186,7 +186,12 @@ const InterProScanDialog = observer(function ({ handleClose, model, }) {
                                     .join('\n'),
                                 onProgress: arg => {
                                     model.setStatus(arg
-                                        ? { ...arg, onCancel: () => { controller.abort(); } }
+                                        ? {
+                                            ...arg,
+                                            onCancel: () => {
+                                                controller.abort();
+                                            },
+                                        }
                                         : undefined);
                                 },
                                 model,

package/dist/components/dialogs/InterProScanDialog.js.map

@@ -1 +1 @@
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+{"version":3,"file":"InterProScanDialog.js","sourceRoot":"","sources":["../../../src/components/dialogs/InterProScanDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvC,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAC/C,OAAO,EAAE,MAAM,EAAE,aAAa,EAAE,aAAa,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAChF,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,kBAAkB,EAAE,MAAM,6BAA6B,CAAA;AAIhE,MAAM,kBAAkB,GAAG,QAAQ,CAAC,UAAU,EAC5C,WAAW,EACX,KAAK,GAIN;IACC,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,GAAG,QAAQ,CAAC;QAC/B;YACE,IAAI,EAAE,SAAS;YACf,WAAW,EAAE,qCAAqC;YAClD,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,MAAM;YACZ,WAAW,EAAE,qCAAqC;YAClD,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,SAAS;YACf,OAAO,EAAE,IAAI;YACb,WAAW,EACT,gEAAgE;YAClE,QAAQ,EAAE,yBAAyB;SACpC;QACD;YACE,IAAI,EAAE,SAAS;YACf,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,yBAAyB;SACpC;QACD;YACE,IAAI,EAAE,aAAa;YACnB,QAAQ,EAAE,gBAAgB;YAC1B,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,uBAAuB;YAC7B,QAAQ,EAAE,gBAAgB;YAC1B,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,uBAAuB;YAC7B,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,gBAAgB;SAC3B;QACD;YACE,IAAI,EAAE,aAAa;YACnB,QAAQ,EAAE,oBAAoB;YAC9B,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,SAAS;YACf,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,QAAQ;YACd,QAAQ,EAAE,oBAAoB;YAC9B,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,OAAO;YACb,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,iBAAiB;YACvB,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,iBAAiB;YACvB,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,OAAO;YACb,QAAQ,EAAE,yBAAyB;YACnC,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,OAAO;YACb,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,KAAK;YACX,WAAW,EAAE,4BAA4B;YACzC,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,QAAQ;YACd,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,OAAO;YACb,QAAQ,EAAE,oCAAoC;YAC9C,OAAO,EAAE,IAAI;SACd;QACD;YACE,IAAI,EAAE,YAAY;YAClB,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,yBAAyB;SACpC;QACD;YACE,IAAI,EAAE,OAAO;YACb,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,gBAAgB;SAC3B;QACD;YACE,IAAI,EAAE,OAAO;YACb,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,yBAAyB;SACpC;QAED;YACE,IAAI,EAAE,SAAS;YACf,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,gBAAgB;SAC3B;QACD;YACE,IAAI,EAAE,QAAQ;YACd,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,gBAAgB;SAC3B;QACD;YACE,IAAI,EAAE,OAAO;YACb,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,oCAAoC;SAC/C;KACF,CAAC,CAAA;IAEF,MAAM,QAAQ,GAAG,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;IAC7D,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAEvC,OAAO,CACL,oBAAC,MAAM,IACL,QAAQ,EAAC,IAAI,EACb,KAAK,EAAC,oCAAoC,EAC1C,OAAO,EAAE,GAAG,EAAE;YACZ,WAAW,EAAE,CAAA;QACf,CAAC,EACD,IAAI;QAEJ,oBAAC,aAAa;YACZ,oBAAC,UAAU,6FAGE;YACb,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;oBACZ,OAAO,CAAC,CAAC,IAAI,CAAC,CAAA;gBAChB,CAAC;gBAEA,IAAI,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM;oCAChB;YACR,IAAI,CAAC,CAAC,CAAC,CACN;gBACE,oBAAC,UAAU,oDAAuD;gBAClE;oBACE,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,GAAG,EAAE;4BACZ,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,OAAO,EAAE,KAAK,EAAE,CAAC,CAAC,CAAC,CAAA;wBACpD,CAAC,kBAGM;oBACT,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;4BACZ,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,OAAO,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAA;wBACnD,CAAC,iBAGM,CACL;gBACN;oBACE,mCACG,IAAI;yBACF,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC;yBACxD,GAAG,CAAC,CAAC,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,CAAC,CACpC,4BAAI,GAAG,EAAE,IAAI;wBACX;4BACE,+BACE,IAAI,EAAC,UAAU,EACf,GAAG,EAAE,IAAI,EACT,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,GAAG,EAAE;oCACb,OAAO,CACL,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CACX,CAAC,CAAC,IAAI,KAAK,IAAI;wCACb,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC,OAAO,EAAE;wCAC/B,CAAC,CAAC,CAAC,CACN,CACF,CAAA;gCACH,CAAC,GACD,CACC;wBACL,gCAAK,IAAI,CAAM;wBACf,gCAAK,QAAQ,CAAM,CAChB,CACN,CAAC,CACE,CACF,CACJ,CACP,CAAC,CAAC,CAAC,IAAI,CACM;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,GAAG,EAAE;oBACZ,WAAW,EAAE,CAAA;gBACf,CAAC,aAGM;YACT,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE;oBACZ,MAAM,UAAU,GAAG,IAAI,eAAe,EAAE,CAEvC;oBAAA,CAAC,KAAK,IAAI,EAAE;wBACX,IAAI,CAAC;4BACH,MAAM,EAAE,IAAI,EAAE,GAAG,KAAK,CAAA;4BACtB,IAAI,IAAI,CAAC,MAAM,GAAG,GAAG,EAAE,CAAC;gCACtB,MAAM,IAAI,KAAK,CACb,qDAAqD,CACtD,CAAA;4BACH,CAAC;4BACD,MAAM,kBAAkB,CAAC;gCACvB,SAAS,EAAE,cAAc;gCACzB,QAAQ,EAAE,QAAQ;gCAClB,GAAG,EAAE,IAAI;qCACN,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,CAAC;qCAChD,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;qCACnB,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC;qCACnC,IAAI,CAAC,IAAI,CAAC;gCACb,UAAU,EAAE,GAAG,CA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package/dist/components/header/FileMenu.js

@@ -2,6 +2,7 @@ import React, { lazy } from 'react';
 import CascadingMenuButton from '@jbrowse/core/ui/CascadingMenuButton';
 import Assignment from '@mui/icons-material/Assignment';
 import FolderOpen from '@mui/icons-material/FolderOpen';
+import Menu from '@mui/icons-material/Menu';
 import PhotoCamera from '@mui/icons-material/PhotoCamera';
 import Settings from '@mui/icons-material/Settings';
 import { observer } from 'mobx-react';
@@ -65,7 +66,7 @@ const FileMenu = observer(({ model }) => {
                 },
             },
         ], anchorOrigin: { vertical: 'bottom', horizontal: 'left' }, transformOrigin: { vertical: 'top', horizontal: 'left' } },
-        React.createElement(FolderOpen, null)));
+        React.createElement(Menu, null)));
 });
 export default FileMenu;
 //# sourceMappingURL=FileMenu.js.map

package/dist/components/header/FileMenu.js.map

@@ -1 +1 @@
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+{"version":3,"file":"FileMenu.js","sourceRoot":"","sources":["../../../src/components/header/FileMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AAEnC,OAAO,mBAAmB,MAAM,sCAAsC,CAAA;AACtE,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,IAAI,MAAM,0BAA0B,CAAA;AAC3C,OAAO,WAAW,MAAM,iCAAiC,CAAA;AACzD,OAAO,QAAQ,MAAM,8BAA8B,CAAA;AACnD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAInD,MAAM,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,8BAA+B,CAAC,CAAC,CAAA;AAC1E,MAAM,eAAe,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,+BAAgC,CAAC,CAAC,CAAA;AAC5E,MAAM,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,8BAA+B,CAAC,CAAC,CAAA;AAE1E,MAAM,QAAQ,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAA2B,EAAE,EAAE;IAC/D,OAAO,CACL,oBAAC,mBAAmB,IAClB,SAAS,EAAE;YACT;gBACE,KAAK,EAAE,uBAAuB;gBAC9B,IAAI,EAAE,UAAU;gBAChB,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,KAAK,EAAE,CAAA;gBACf,CAAC;aACF;YACD;gBACE,KAAK,EAAE,UAAU;gBACjB,IAAI,EAAE,UAAU;gBAChB,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;wBAC3B,cAAc;wBACd;4BACE,KAAK;4BACL,OAAO;yBACR;qBACF,CAAC,CAAA;gBACJ,CAAC;aACF;YACD;gBACE,KAAK,EAAE,eAAe;gBACtB,IAAI,EAAE,QAAQ;gBACd,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;wBAC3B,cAAc;wBACd;4BACE,KAAK;4BACL,OAAO;yBACR;qBACF,CAAC,CAAA;gBACJ,CAAC;aACF;YACD;gBACE,KAAK,EAAE,iBAAiB;gBACxB,IAAI,EAAE,SAAS;gBACf,OAAO,EAAE,aAAa,CAAC;oBACrB,KAAK;iBACN,CAAC;aACH;YACD;gBACE,KAAK,EAAE,YAAY;gBACnB,IAAI,EAAE,WAAW;gBACjB,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;wBAC3B,eAAe;wBACf;4BACE,OAAO;4BACP,KAAK;yBACN;qBACF,CAAC,CAAA;gBACJ,CAAC;aACF;SACF,EACD,YAAY,EAAE,EAAE,QAAQ,EAAE,QAAQ,EAAE,UAAU,EAAE,MAAM,EAAE,EACxD,eAAe,EAAE,EAAE,QAAQ,EAAE,KAAK,EAAE,UAAU,EAAE,MAAM,EAAE;QAExD,oBAAC,IAAI,OAAG,CACY,CACvB,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,QAAQ,CAAA"}

package/dist/components/header/Header.js

@@ -17,7 +17,7 @@ const AboutDialog = lazy(() => import("../dialogs/AboutDialog.js"));
 const Header = observer(function ({ model }) {
     const [ref, { height }] = useMeasure();
     useEffect(() => {
-        model.setHeaderHeight(height || 0);
+        model.setHeaderHeight(height ?? 0);
     }, [model, height]);
     return (React.createElement("div", { ref: ref, style: { display: 'flex' } },
         React.createElement(FileMenu, { model: model }),

package/dist/components/header/settingsMenuItems.js

@@ -5,19 +5,25 @@ export function msaSettingsMenuItems(model) {
             label: 'Draw letters',
             type: 'checkbox',
             checked: drawMsaLetters,
-            onClick: () => { model.setDrawMsaLetters(!drawMsaLetters); },
+            onClick: () => {
+                model.setDrawMsaLetters(!drawMsaLetters);
+            },
         },
         {
             label: 'Color letters instead of background of tiles',
             type: 'checkbox',
             checked: !bgColor,
-            onClick: () => { model.setBgColor(!bgColor); },
+            onClick: () => {
+                model.setBgColor(!bgColor);
+            },
         },
         {
             label: 'Enable hiding gappy columns?',
             type: 'checkbox',
             checked: hideGaps,
-            onClick: () => { model.setHideGaps(!hideGaps); },
+            onClick: () => {
+                model.setHideGaps(!hideGaps);
+            },
         },
     ];
 }
@@ -28,31 +34,41 @@ export function treeSettingsMenuItems(model) {
             label: 'Show branch length',
             type: 'checkbox',
             checked: showBranchLen,
-            onClick: () => { model.setShowBranchLen(!showBranchLen); },
+            onClick: () => {
+                model.setShowBranchLen(!showBranchLen);
+            },
         },
         {
             label: 'Show tree',
             type: 'checkbox',
             checked: drawTree,
-            onClick: () => { model.setDrawTree(!drawTree); },
+            onClick: () => {
+                model.setDrawTree(!drawTree);
+            },
         },
         {
             label: 'Draw clickable bubbles on tree branches',
             type: 'checkbox',
             checked: drawNodeBubbles,
-            onClick: () => { model.setDrawNodeBubbles(!drawNodeBubbles); },
+            onClick: () => {
+                model.setDrawNodeBubbles(!drawNodeBubbles);
+            },
         },
         {
             label: 'Tree labels align right',
             type: 'checkbox',
             checked: labelsAlignRight,
-            onClick: () => { model.setLabelsAlignRight(!labelsAlignRight); },
+            onClick: () => {
+                model.setLabelsAlignRight(!labelsAlignRight);
+            },
         },
         {
             label: 'Draw labels',
             type: 'checkbox',
             checked: drawLabels,
-            onClick: () => { model.setDrawLabels(!drawLabels); },
+            onClick: () => {
+                model.setDrawLabels(!drawLabels);
+            },
         },
     ];
 }

package/dist/components/header/settingsMenuItems.js.map

@@ -1 +1 @@
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+{"version":3,"file":"settingsMenuItems.js","sourceRoot":"","sources":["../../../src/components/header/settingsMenuItems.ts"],"names":[],"mappings":"AAGA,MAAM,UAAU,oBAAoB,CAAC,KAAmB;IACtD,MAAM,EAAE,cAAc,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IACnD,OAAO;QACL;YACE,KAAK,EAAE,cAAc;YACrB,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,cAAc;YACvB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,iBAAiB,CAAC,CAAC,cAAc,CAAC,CAAA;YAC1C,CAAC;SACF;QACD;YACE,KAAK,EAAE,8CAA8C;YACrD,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,CAAC,OAAO;YACjB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,UAAU,CAAC,CAAC,OAAO,CAAC,CAAA;YAC5B,CAAC;SACF;QACD;YACE,KAAK,EAAE,8BAA8B;YACrC,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,QAAQ;YACjB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,WAAW,CAAC,CAAC,QAAQ,CAAC,CAAA;YAC9B,CAAC;SACF;KACF,CAAA;AACH,CAAC;AAED,MAAM,UAAU,qBAAqB,CAAC,KAAmB;IACvD,MAAM,EACJ,QAAQ,EACR,aAAa,EACb,gBAAgB,EAChB,eAAe,EACf,UAAU,GACX,GAAG,KAAK,CAAA;IACT,OAAO;QACL;YACE,KAAK,EAAE,oBAAoB;YAC3B,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,aAAa;YACtB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,gBAAgB,CAAC,CAAC,aAAa,CAAC,CAAA;YACxC,CAAC;SACF;QACD;YACE,KAAK,EAAE,WAAW;YAClB,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,QAAQ;YACjB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,WAAW,CAAC,CAAC,QAAQ,CAAC,CAAA;YAC9B,CAAC;SACF;QACD;YACE,KAAK,EAAE,yCAAyC;YAChD,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,eAAe;YACxB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,kBAAkB,CAAC,CAAC,eAAe,CAAC,CAAA;YAC5C,CAAC;SACF;QACD;YACE,KAAK,EAAE,yBAAyB;YAChC,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,gBAAgB;YACzB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,mBAAmB,CAAC,CAAC,gBAAgB,CAAC,CAAA;YAC9C,CAAC;SACF;QACD;YACE,KAAK,EAAE,aAAa;YACpB,IAAI,EAAE,UAAU;YAChB,OAAO,EAAE,UAAU;YACnB,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,aAAa,CAAC,CAAC,UAAU,CAAC,CAAA;YAClC,CAAC;SACF;KACF,CAAA;AACH,CAAC"}

package/dist/components/minimap/Minimap.js

@@ -43,12 +43,7 @@ const Minimap = observer(function ({ model }) {
                 startDrag(event, model.scrollX);
             } }),
         React.createElement("svg", { height: polygonHeight, style: { width: '100%' } },
-            React.createElement("polygon", { fill: fill, points: [
-                    [s + w, 0],
-                    [s, 0],
-                    [0, polygonHeight],
-                    [msaAreaWidth, polygonHeight],
-                ].toString() }))));
+            React.createElement("polygon", { fill: fill, points: `${s + w},0 ${s},0 0,${polygonHeight} ${msaAreaWidth},${polygonHeight}` }))));
 });
 export default Minimap;
 //# sourceMappingURL=Minimap.js.map

package/dist/components/minimap/Minimap.js.map

@@ -1 +1 @@
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+{"version":3,"file":"Minimap.js","sourceRoot":"","sources":["../../../src/components/minimap/Minimap.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEpD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,EAAE,aAAa,EAAE,MAAM,wBAAwB,CAAA;AAItD,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,CAAC,OAAO,EAAE,UAAU,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAC7C,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,aAAa,EAAE,QAAQ,EAAE,UAAU,EAAE,GAAG,KAAK,CAAA;IAC5E,MAAM,IAAI,GAAG,YAAY,GAAG,UAAU,GAAG,QAAQ,CAAA;IACjD,MAAM,IAAI,GAAG,CAAC,OAAO,CAAA;IACrB,MAAM,KAAK,GAAG,IAAI,GAAG,YAAY,CAAA;IACjC,MAAM,CAAC,GAAG,IAAI,GAAG,IAAI,CAAA;IACrB,MAAM,CAAC,GAAG,KAAK,GAAG,IAAI,CAAA;IACtB,MAAM,IAAI,GAAG,yBAAyB,CAAA;IACtC,MAAM,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAAA;IAE7B,MAAM,EAAE,SAAS,EAAE,GAAG,aAAa,CACjC,GAAG,EACH,WAAW,CACT,CAAC,KAAa,EAAE,WAAmB,EAAE,EAAE;QACrC,KAAK,CAAC,UAAU,CAAC,WAAW,GAAG,KAAK,GAAG,IAAI,CAAC,CAAA;IAC9C,CAAC,EACD,CAAC,KAAK,EAAE,IAAI,CAAC,CACd,CACF,CAAA;IAED,MAAM,SAAS,GAAG,EAAE,CAAA;IACpB,MAAM,aAAa,GAAG,aAAa,GAAG,SAAS,CAAA;IAC/C,OAAO,CACL,6BACE,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM,EAAE,aAAa;YACrB,KAAK,EAAE,MAAM;SACd;QAED,6BACE,KAAK,EAAE;gBACL,MAAM,EAAE,SAAS;gBACjB,SAAS,EAAE,YAAY;gBACvB,MAAM,EAAE,gBAAgB;aACzB,GACD;QACF,6BACE,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC;gBACpB,UAAU,EAAE,OAAO,CAAC,CAAC,CAAC,sBAAsB,CAAC,CAAC,CAAC,IAAI;gBACnD,MAAM,EAAE,SAAS;gBACjB,MAAM,EAAE,SAAS;gBACjB,KAAK,EAAE,CAAC;gBACR,MAAM,EAAE,GAAG;aACZ,EACD,WAAW,EAAE,GAAG,EAAE;gBAChB,UAAU,CAAC,IAAI,CAAC,CAAA;YAClB,CAAC,EACD,UAAU,EAAE,GAAG,EAAE;gBACf,UAAU,CAAC,KAAK,CAAC,CAAA;YACnB,CAAC,EACD,WAAW,EAAE,KAAK,CAAC,EAAE;gBACnB,SAAS,CAAC,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAA;YACjC,CAAC,GACD;QAEF,6BAAK,MAAM,EAAE,aAAa,EAAE,KAAK,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE;YAClD,iCACE,IAAI,EAAE,IAAI,EACV,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,QAAQ,aAAa,IAAI,YAAY,IAAI,aAAa,EAAE,GAC/E,CACE,CACF,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,OAAO,CAAA"}

package/dist/components/minimap/MinimapSVG.js

@@ -3,24 +3,20 @@ import { observer } from 'mobx-react';
 const MinimapSVG = observer(({ model }) => {
     const { scrollX, msaAreaWidth: W, minimapHeight: H, colWidth, numColumns, } = model;
     const BAR_HEIGHT = 12;
-    const H2 = H - 12;
+    const H2 = H - BAR_HEIGHT;
     const unit = W / numColumns / colWidth;
     const left = -scrollX;
     const right = left + W;
     const s = left * unit;
     const e = right * unit;
+    const w = Math.max(e - s, 20);
     const fillColor = 'rgb(66, 119, 127)';
     const fillOpacity = 0.3;
     return (React.createElement(React.Fragment, null,
         React.createElement("rect", { x: 0, y: 0, width: W, height: BAR_HEIGHT, stroke: "#555", fill: "none" }),
-        React.createElement("rect", { x: Math.max(0, s), y: 0, width: e - s, height: BAR_HEIGHT, fill: fillColor, fillOpacity: fillOpacity, stroke: "#555" }),
+        React.createElement("rect", { x: Math.max(0, s), y: 0, width: w, height: BAR_HEIGHT, fill: fillColor, fillOpacity: fillOpacity, stroke: "#555" }),
         React.createElement("g", { transform: `translate(0 ${BAR_HEIGHT})` },
-            React.createElement("polygon", { fill: fillColor, fillOpacity: fillOpacity, points: [
-                    [e, 0],
-                    [s, 0],
-                    [0, H2],
-                    [W, H2],
-                ].toString() }))));
+            React.createElement("polygon", { fill: fillColor, fillOpacity: fillOpacity, points: `${s + w},0 ${s},0 0,${H2} ${W},${H2}` }))));
 });
 export default MinimapSVG;
 //# sourceMappingURL=MinimapSVG.js.map

package/dist/components/minimap/MinimapSVG.js.map

@@ -1 +1 @@
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+{"version":3,"file":"MinimapSVG.js","sourceRoot":"","sources":["../../../src/components/minimap/MinimapSVG.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,MAAM,UAAU,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAA2B,EAAE,EAAE;IACjE,MAAM,EACJ,OAAO,EACP,YAAY,EAAE,CAAC,EACf,aAAa,EAAE,CAAC,EAChB,QAAQ,EACR,UAAU,GACX,GAAG,KAAK,CAAA;IAET,MAAM,UAAU,GAAG,EAAE,CAAA;IACrB,MAAM,EAAE,GAAG,CAAC,GAAG,UAAU,CAAA;IAEzB,MAAM,IAAI,GAAG,CAAC,GAAG,UAAU,GAAG,QAAQ,CAAA;IACtC,MAAM,IAAI,GAAG,CAAC,OAAO,CAAA;IACrB,MAAM,KAAK,GAAG,IAAI,GAAG,CAAC,CAAA;IACtB,MAAM,CAAC,GAAG,IAAI,GAAG,IAAI,CAAA;IACrB,MAAM,CAAC,GAAG,KAAK,GAAG,IAAI,CAAA;IACtB,MAAM,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAAA;IAC7B,MAAM,SAAS,GAAG,mBAAmB,CAAA;IACrC,MAAM,WAAW,GAAG,GAAG,CAAA;IAEvB,OAAO,CACL;QACE,8BACE,CAAC,EAAE,CAAC,EACJ,CAAC,EAAE,CAAC,EACJ,KAAK,EAAE,CAAC,EACR,MAAM,EAAE,UAAU,EAClB,MAAM,EAAC,MAAM,EACb,IAAI,EAAC,MAAM,GACX;QACF,8BACE,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC,EACjB,CAAC,EAAE,CAAC,EACJ,KAAK,EAAE,CAAC,EACR,MAAM,EAAE,UAAU,EAClB,IAAI,EAAE,SAAS,EACf,WAAW,EAAE,WAAW,EACxB,MAAM,EAAC,MAAM,GACb;QACF,2BAAG,SAAS,EAAE,eAAe,UAAU,GAAG;YACxC,iCACE,IAAI,EAAE,SAAS,EACf,WAAW,EAAE,WAAW,EACxB,MAAM,EAAE,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,QAAQ,EAAE,IAAI,CAAC,IAAI,EAAE,EAAE,GAC9C,CACA,CACH,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,UAAU,CAAA"}

package/dist/components/msa/getVisibleLeaves.d.ts

@@ -0,0 +1,6 @@
+import type { MsaViewModel } from '../../model.ts';
+export declare function getVisibleLeaves({ model, offsetY, blockSizeY, }: {
+    model: MsaViewModel;
+    offsetY: number;
+    blockSizeY: number;
+}): import("../../hierarchy.ts").HierarchyNode<import("../../types.ts").NodeWithIdsAndLength>[];

package/dist/components/msa/getVisibleLeaves.js

@@ -0,0 +1,9 @@
+// The slice of leaves whose rows intersect a block of height blockSizeY at
+// vertical offset offsetY, padded by one row on each side.
+export function getVisibleLeaves({ model, offsetY, blockSizeY, }) {
+    const { leaves, rowHeight } = model;
+    const yStart = Math.max(0, Math.floor((offsetY - rowHeight) / rowHeight));
+    const yEnd = Math.max(0, Math.ceil((offsetY + blockSizeY + rowHeight) / rowHeight));
+    return leaves.slice(yStart, yEnd);
+}
+//# sourceMappingURL=getVisibleLeaves.js.map

package/dist/components/msa/getVisibleLeaves.js.map

@@ -0,0 +1 @@
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package/dist/components/msa/renderBoxFeatureCanvasBlock.d.ts

@@ -1,9 +1,10 @@
 import type { MsaViewModel } from '../../model.ts';
+import type { RenderCtx } from '../renderCtx.ts';
 export declare function renderBoxFeatureCanvasBlock({ model, offsetX, offsetY, ctx, highResScaleFactorOverride, blockSizeYOverride, }: {
     offsetX: number;
     offsetY: number;
     model: MsaViewModel;
-    ctx: CanvasRenderingContext2D;
+    ctx: RenderCtx;
     highResScaleFactorOverride?: number;
     blockSizeYOverride?: number;
 }): void;

package/dist/components/msa/renderBoxFeatureCanvasBlock.js

@@ -1,14 +1,13 @@
+import { getVisibleLeaves } from "./getVisibleLeaves.js";
 export function renderBoxFeatureCanvasBlock({ model, offsetX, offsetY, ctx, highResScaleFactorOverride, blockSizeYOverride, }) {
-    const { leaves, blockSize, rowHeight, highResScaleFactor, showDomains } = model;
+    const { blockSize, rowHeight, highResScaleFactor, showDomains } = model;
     if (showDomains) {
-        const k = highResScaleFactorOverride || highResScaleFactor;
-        const by = blockSizeYOverride || blockSize;
+        const k = highResScaleFactorOverride ?? highResScaleFactor;
+        const by = blockSizeYOverride ?? blockSize;
         ctx.resetTransform();
         ctx.scale(k, k);
         ctx.translate(-offsetX, rowHeight / 2 - offsetY);
-        const yStart = Math.max(0, Math.floor((offsetY - rowHeight) / rowHeight));
-        const yEnd = Math.max(0, Math.ceil((offsetY + by + rowHeight) / rowHeight));
-        const visibleLeaves = leaves.slice(yStart, yEnd);
+        const visibleLeaves = getVisibleLeaves({ model, offsetY, blockSizeY: by });
         drawTiles({
             model,
             ctx,