react-msaview 4.6.0 → 4.8.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (93) hide show
  1. package/bundle/index.js +99 -99
  2. package/bundle/index.js.LICENSE.txt +6 -6
  3. package/bundle/index.js.map +1 -1
  4. package/dist/__snapshots__/parseAsn1.test.js.snap +2400 -0
  5. package/dist/components/header/HeaderInfoArea.js +3 -4
  6. package/dist/components/header/HeaderInfoArea.js.map +1 -1
  7. package/dist/components/import/ImportForm.js +6 -2
  8. package/dist/components/import/ImportForm.js.map +1 -1
  9. package/dist/components/import/util.d.ts +1 -1
  10. package/dist/components/import/util.js +4 -1
  11. package/dist/components/import/util.js.map +1 -1
  12. package/dist/components/msa/renderBoxFeatureCanvasBlock.js +7 -2
  13. package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
  14. package/dist/components/msa/renderMSABlock.js.map +1 -1
  15. package/dist/components/tree/renderTreeCanvas.js +10 -8
  16. package/dist/components/tree/renderTreeCanvas.js.map +1 -1
  17. package/dist/model.d.ts +153 -16
  18. package/dist/model.js +97 -29
  19. package/dist/model.js.map +1 -1
  20. package/dist/rowCoordinateCalculations.d.ts +69 -9
  21. package/dist/rowCoordinateCalculations.js +118 -46
  22. package/dist/rowCoordinateCalculations.js.map +1 -1
  23. package/dist/rowCoordinateCalculations.test.js +152 -52
  24. package/dist/rowCoordinateCalculations.test.js.map +1 -1
  25. package/dist/seqPosToGlobalCol.d.ts +19 -0
  26. package/dist/seqPosToGlobalCol.js +34 -0
  27. package/dist/seqPosToGlobalCol.js.map +1 -0
  28. package/dist/seqPosToGlobalCol.test.js +60 -0
  29. package/dist/seqPosToGlobalCol.test.js.map +1 -0
  30. package/dist/util.d.ts +1 -2
  31. package/dist/util.js +0 -9
  32. package/dist/util.js.map +1 -1
  33. package/dist/version.d.ts +1 -1
  34. package/dist/version.js +1 -1
  35. package/package.json +7 -9
  36. package/src/components/header/HeaderInfoArea.tsx +2 -5
  37. package/src/components/import/ImportForm.tsx +6 -1
  38. package/src/components/import/util.ts +4 -0
  39. package/src/components/msa/renderBoxFeatureCanvasBlock.ts +7 -2
  40. package/src/components/msa/renderMSABlock.ts +5 -1
  41. package/src/components/tree/renderTreeCanvas.ts +11 -9
  42. package/src/declare.d.ts +0 -1
  43. package/src/model.ts +122 -42
  44. package/src/rowCoordinateCalculations.test.ts +167 -74
  45. package/src/rowCoordinateCalculations.ts +138 -63
  46. package/src/seqPosToGlobalCol.test.ts +71 -0
  47. package/src/seqPosToGlobalCol.ts +40 -0
  48. package/src/util.ts +1 -19
  49. package/src/version.ts +1 -1
  50. package/dist/parseGFF.d.ts +0 -10
  51. package/dist/parseGFF.js +0 -31
  52. package/dist/parseGFF.js.map +0 -1
  53. package/dist/parseNewick.d.ts +0 -60
  54. package/dist/parseNewick.js +0 -95
  55. package/dist/parseNewick.js.map +0 -1
  56. package/dist/parsers/A3mMSA.d.ts +0 -43
  57. package/dist/parsers/A3mMSA.js +0 -277
  58. package/dist/parsers/A3mMSA.js.map +0 -1
  59. package/dist/parsers/A3mMSA.test.js +0 -138
  60. package/dist/parsers/A3mMSA.test.js.map +0 -1
  61. package/dist/parsers/ClustalMSA.d.ts +0 -30
  62. package/dist/parsers/ClustalMSA.js +0 -55
  63. package/dist/parsers/ClustalMSA.js.map +0 -1
  64. package/dist/parsers/EmfMSA.d.ts +0 -27
  65. package/dist/parsers/EmfMSA.js +0 -53
  66. package/dist/parsers/EmfMSA.js.map +0 -1
  67. package/dist/parsers/EmfTree.d.ts +0 -5
  68. package/dist/parsers/EmfTree.js +0 -8
  69. package/dist/parsers/EmfTree.js.map +0 -1
  70. package/dist/parsers/FastaMSA.d.ts +0 -19
  71. package/dist/parsers/FastaMSA.js +0 -69
  72. package/dist/parsers/FastaMSA.js.map +0 -1
  73. package/dist/parsers/StockholmMSA.d.ts +0 -68
  74. package/dist/parsers/StockholmMSA.js +0 -107
  75. package/dist/parsers/StockholmMSA.js.map +0 -1
  76. package/dist/seqCoordToRowSpecificGlobalCoord.d.ts +0 -4
  77. package/dist/seqCoordToRowSpecificGlobalCoord.js +0 -19
  78. package/dist/seqCoordToRowSpecificGlobalCoord.js.map +0 -1
  79. package/dist/seqCoordToRowSpecificGlobalCoord.test.d.ts +0 -1
  80. package/dist/seqCoordToRowSpecificGlobalCoord.test.js +0 -42
  81. package/dist/seqCoordToRowSpecificGlobalCoord.test.js.map +0 -1
  82. package/src/parseGFF.ts +0 -34
  83. package/src/parseNewick.ts +0 -94
  84. package/src/parsers/A3mMSA.test.ts +0 -164
  85. package/src/parsers/A3mMSA.ts +0 -321
  86. package/src/parsers/ClustalMSA.ts +0 -69
  87. package/src/parsers/EmfMSA.ts +0 -67
  88. package/src/parsers/EmfTree.ts +0 -9
  89. package/src/parsers/FastaMSA.ts +0 -82
  90. package/src/parsers/StockholmMSA.ts +0 -140
  91. package/src/seqCoordToRowSpecificGlobalCoord.test.ts +0 -53
  92. package/src/seqCoordToRowSpecificGlobalCoord.ts +0 -25
  93. /package/dist/{parsers/A3mMSA.test.d.ts → seqPosToGlobalCol.test.d.ts} +0 -0
package/bundle/index.js.LICENSE.txt CHANGED
@@ -126,7 +126,7 @@ PERFORMANCE OF THIS SOFTWARE.
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  */
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  /**
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- * @mui/material v7.3.6
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+ * @mui/material v7.3.7
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the
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  */
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  /**
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- * @mui/private-theming v7.3.6
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+ * @mui/private-theming v7.3.7
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the
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  */
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  /**
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- * @mui/styled-engine v7.3.6
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+ * @mui/styled-engine v7.3.7
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the
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  */
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  /**
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- * @mui/system v7.3.6
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+ * @mui/system v7.3.7
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the
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  */
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  /**
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- * @mui/x-data-grid v8.23.0
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+ * @mui/x-data-grid v8.24.0
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the
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  */
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  /**
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- * @mui/x-virtualizer v0.3.0
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+ * @mui/x-virtualizer v0.3.1
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  *
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  * @license MIT
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  * This source code is licensed under the MIT license found in the