react-msaview 4.0.2 → 4.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/bundle/index.js +282 -111
- package/dist/colorSchemes.js +1 -1
- package/dist/colorSchemes.js.map +1 -1
- package/dist/components/Checkbox2.js.map +1 -1
- package/dist/components/Loading.js +5 -6
- package/dist/components/Loading.js.map +1 -1
- package/dist/components/MSAView.js +3 -4
- package/dist/components/MSAView.js.map +1 -1
- package/dist/components/ResizeHandles.js.map +1 -1
- package/dist/components/SequenceTextArea.js +1 -2
- package/dist/components/SequenceTextArea.js.map +1 -1
- package/dist/components/TextTrack.d.ts +1 -1
- package/dist/components/TextTrack.js +1 -1
- package/dist/components/TextTrack.js.map +1 -1
- package/dist/components/Track.js +4 -5
- package/dist/components/Track.js.map +1 -1
- package/dist/components/VerticalScrollbar.js +1 -1
- package/dist/components/VerticalScrollbar.js.map +1 -1
- package/dist/components/dialogs/AboutDialog.js +4 -4
- package/dist/components/dialogs/AboutDialog.js.map +1 -1
- package/dist/components/dialogs/AddTrackDialog.js +1 -1
- package/dist/components/dialogs/AddTrackDialog.js.map +1 -1
- package/dist/components/dialogs/DomainDialog.js +1 -2
- package/dist/components/dialogs/DomainDialog.js.map +1 -1
- package/dist/components/dialogs/ExportSVGDialog.js +1 -1
- package/dist/components/dialogs/ExportSVGDialog.js.map +1 -1
- package/dist/components/dialogs/FeatureDialog.js +1 -1
- package/dist/components/dialogs/FeatureDialog.js.map +1 -1
- package/dist/components/dialogs/InterProScanDialog.js +3 -3
- package/dist/components/dialogs/InterProScanDialog.js.map +1 -1
- package/dist/components/dialogs/MetadataDialog.js +3 -2
- package/dist/components/dialogs/MetadataDialog.js.map +1 -1
- package/dist/components/dialogs/SettingsDialog.js +29 -29
- package/dist/components/dialogs/SettingsDialog.js.map +1 -1
- package/dist/components/dialogs/TrackInfoDialog.js +2 -2
- package/dist/components/dialogs/TrackInfoDialog.js.map +1 -1
- package/dist/components/dialogs/TracklistDialog.js +1 -1
- package/dist/components/dialogs/TracklistDialog.js.map +1 -1
- package/dist/components/dialogs/UserProvidedDomainsDialog.js +3 -3
- package/dist/components/dialogs/UserProvidedDomainsDialog.js.map +1 -1
- package/dist/components/header/Header.js +5 -7
- package/dist/components/header/Header.js.map +1 -1
- package/dist/components/header/HeaderInfoArea.js.map +1 -1
- package/dist/components/header/HeaderMenu.js +3 -4
- package/dist/components/header/HeaderMenu.js.map +1 -1
- package/dist/components/header/HeaderMenuExtra.js +8 -9
- package/dist/components/header/HeaderMenuExtra.js.map +1 -1
- package/dist/components/header/HeaderStatusArea.js +1 -1
- package/dist/components/header/HeaderStatusArea.js.map +1 -1
- package/dist/components/header/MultiAlignmentSelector.js +1 -1
- package/dist/components/header/MultiAlignmentSelector.js.map +1 -1
- package/dist/components/header/ZoomControls.js +11 -5
- package/dist/components/header/ZoomControls.js.map +1 -1
- package/dist/components/import/ImportForm.js +19 -15
- package/dist/components/import/ImportForm.js.map +1 -1
- package/dist/components/import/ImportFormExamples.js +2 -2
- package/dist/components/import/ImportFormExamples.js.map +1 -1
- package/dist/components/import/util.d.ts +1 -1
- package/dist/components/minimap/Minimap.js.map +1 -1
- package/dist/components/minimap/MinimapSVG.js.map +1 -1
- package/dist/components/msa/Loading.js +1 -1
- package/dist/components/msa/Loading.js.map +1 -1
- package/dist/components/msa/MSACanvas.js +2 -2
- package/dist/components/msa/MSACanvas.js.map +1 -1
- package/dist/components/msa/MSACanvasBlock.js +2 -3
- package/dist/components/msa/MSACanvasBlock.js.map +1 -1
- package/dist/components/msa/MSAMouseoverCanvas.js +1 -1
- package/dist/components/msa/MSAMouseoverCanvas.js.map +1 -1
- package/dist/components/msa/MSAPanel.js +0 -1
- package/dist/components/msa/MSAPanel.js.map +1 -1
- package/dist/components/msa/renderBoxFeatureCanvasBlock.js.map +1 -1
- package/dist/components/msa/renderMSABlock.d.ts +1 -1
- package/dist/components/msa/renderMSABlock.js +9 -3
- package/dist/components/msa/renderMSABlock.js.map +1 -1
- package/dist/components/tree/TreeBranchMenu.js.map +1 -1
- package/dist/components/tree/TreeCanvas.js +1 -2
- package/dist/components/tree/TreeCanvas.js.map +1 -1
- package/dist/components/tree/TreeCanvasBlock.js +4 -5
- package/dist/components/tree/TreeCanvasBlock.js.map +1 -1
- package/dist/components/tree/TreeNodeMenu.js +5 -1
- package/dist/components/tree/TreeNodeMenu.js.map +1 -1
- package/dist/components/tree/TreePanel.js.map +1 -1
- package/dist/components/tree/TreeRuler.js.map +1 -1
- package/dist/components/tree/dialogs/TreeNodeInfoDialog.js +2 -1
- package/dist/components/tree/dialogs/TreeNodeInfoDialog.js.map +1 -1
- package/dist/components/tree/renderTreeCanvas.d.ts +2 -2
- package/dist/components/tree/renderTreeCanvas.js +5 -5
- package/dist/components/tree/renderTreeCanvas.js.map +1 -1
- package/dist/index.d.ts +1 -1
- package/dist/index.js.map +1 -1
- package/dist/launchInterProScan.js.map +1 -1
- package/dist/model/DialogQueue.js.map +1 -1
- package/dist/model/treeModel.d.ts +1 -1
- package/dist/model/treeModel.js +1 -1
- package/dist/model/treeModel.js.map +1 -1
- package/dist/model.d.ts +30 -34
- package/dist/model.js +71 -40
- package/dist/model.js.map +1 -1
- package/dist/parsers/ClustalMSA.js.map +1 -1
- package/dist/parsers/EmfMSA.js.map +1 -1
- package/dist/parsers/StockholmMSA.js.map +1 -1
- package/dist/renderToSvg.d.ts +1 -1
- package/dist/renderToSvg.js +5 -6
- package/dist/renderToSvg.js.map +1 -1
- package/dist/rowCoordinateCalculations.test.js.map +1 -1
- package/dist/util.d.ts +1 -1
- package/dist/util.js +1 -1
- package/dist/util.js.map +1 -1
- package/dist/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/package.json +4 -5
- package/src/colorSchemes.ts +2 -1
- package/src/components/Checkbox2.tsx +1 -0
- package/src/components/Loading.tsx +7 -6
- package/src/components/MSAView.tsx +6 -5
- package/src/components/ResizeHandles.tsx +1 -1
- package/src/components/SequenceTextArea.tsx +2 -2
- package/src/components/TextTrack.tsx +5 -3
- package/src/components/Track.tsx +5 -5
- package/src/components/VerticalScrollbar.tsx +5 -2
- package/src/components/dialogs/AboutDialog.tsx +6 -7
- package/src/components/dialogs/AddTrackDialog.tsx +7 -5
- package/src/components/dialogs/DomainDialog.tsx +3 -2
- package/src/components/dialogs/ExportSVGDialog.tsx +7 -5
- package/src/components/dialogs/FeatureDialog.tsx +4 -3
- package/src/components/dialogs/InterProScanDialog.tsx +6 -5
- package/src/components/dialogs/MetadataDialog.tsx +6 -7
- package/src/components/dialogs/SettingsDialog.tsx +24 -22
- package/src/components/dialogs/TrackInfoDialog.tsx +3 -2
- package/src/components/dialogs/TracklistDialog.tsx +4 -4
- package/src/components/dialogs/UserProvidedDomainsDialog.tsx +7 -6
- package/src/components/header/Header.tsx +8 -11
- package/src/components/header/HeaderInfoArea.tsx +1 -1
- package/src/components/header/HeaderMenu.tsx +4 -6
- package/src/components/header/HeaderMenuExtra.tsx +9 -11
- package/src/components/header/HeaderStatusArea.tsx +2 -2
- package/src/components/header/MultiAlignmentSelector.tsx +2 -2
- package/src/components/header/ZoomControls.tsx +13 -6
- package/src/components/import/ImportForm.tsx +31 -24
- package/src/components/import/ImportFormExamples.tsx +5 -4
- package/src/components/import/util.ts +1 -1
- package/src/components/minimap/Minimap.tsx +2 -0
- package/src/components/minimap/MinimapSVG.tsx +2 -0
- package/src/components/msa/Loading.tsx +2 -1
- package/src/components/msa/MSACanvas.tsx +5 -4
- package/src/components/msa/MSACanvasBlock.tsx +5 -4
- package/src/components/msa/MSAMouseoverCanvas.tsx +4 -3
- package/src/components/msa/MSAPanel.tsx +2 -1
- package/src/components/msa/renderBoxFeatureCanvasBlock.ts +1 -3
- package/src/components/msa/renderMSABlock.ts +11 -10
- package/src/components/tree/TreeBranchMenu.tsx +1 -1
- package/src/components/tree/TreeCanvas.tsx +4 -4
- package/src/components/tree/TreeCanvasBlock.tsx +7 -7
- package/src/components/tree/TreeNodeMenu.tsx +10 -1
- package/src/components/tree/TreePanel.tsx +3 -1
- package/src/components/tree/TreeRuler.tsx +1 -1
- package/src/components/tree/dialogs/TreeNodeInfoDialog.tsx +5 -6
- package/src/components/tree/renderTreeCanvas.ts +7 -9
- package/src/index.ts +1 -1
- package/src/launchInterProScan.ts +2 -0
- package/src/model/DialogQueue.ts +2 -1
- package/src/model/treeModel.ts +1 -1
- package/src/model.ts +89 -58
- package/src/parsers/ClustalMSA.ts +1 -0
- package/src/parsers/EmfMSA.ts +1 -0
- package/src/parsers/StockholmMSA.ts +1 -1
- package/src/renderToSvg.tsx +7 -9
- package/src/rowCoordinateCalculations.test.ts +1 -0
- package/src/util.ts +4 -3
- package/src/version.ts +1 -1
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@@ -39,7 +39,7 @@ export function renderMSABlock({ model, offsetX, offsetY, contrastScheme, ctx, t
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ctx.resetTransform();
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}
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function drawTiles({ model, offsetX, ctx, visibleLeaves, theme, xStart, xEnd, }) {
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const { bgColor, colorSchemeName, colorScheme,
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const { bgColor, colorSchemeName, colorScheme, columns, colWidth, rowHeight, } = model;
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for (const node of visibleLeaves) {
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const { data: { name }, } = node;
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const y = node.x;
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@@ -48,9 +48,15 @@ function drawTiles({ model, offsetX, ctx, visibleLeaves, theme, xStart, xEnd, })
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for (let i = 0; i < str.length; i++) {
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const letter = str[i];
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const color = colorSchemeName === 'clustalx_protein_dynamic'
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? getClustalXColor(
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? getClustalXColor(
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// use model.colStats dot notation here: delay use of colStats
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// until absolutely needed
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model.colStats[xStart + i], model.colStatsSums[xStart + i], model, name, xStart + i)
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: colorSchemeName === 'percent_identity_dynamic'
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? getPercentIdentityColor(
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? getPercentIdentityColor(
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// use model.colStats dot notation here: delay use of
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// colStats until absolutely needed
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model.colStats[xStart + i], model.colStatsSums[xStart + i], model, name, xStart + i)
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: colorScheme[letter.toUpperCase()];
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if (bgColor) {
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ctx.fillStyle = color || theme.palette.background.default;
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@@ -1 +1 @@
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{"version":3,"file":"renderMSABlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSABlock.ts"],"names":[],"mappings":"
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{"version":3,"file":"renderMSABlock.js","sourceRoot":"","sources":["../../../src/components/msa/renderMSABlock.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,gBAAgB,EAAE,uBAAuB,EAAE,MAAM,oBAAoB,CAAA;AAO9E,MAAM,UAAU,cAAc,CAAC,EAC7B,KAAK,EACL,OAAO,EACP,OAAO,EACP,cAAc,EACd,GAAG,EACH,KAAK,EACL,0BAA0B,EAC1B,kBAAkB,EAClB,kBAAkB,GAWnB;IACC,MAAM,EACJ,QAAQ,EACR,SAAS,EACT,SAAS,EACT,QAAQ,EACR,kBAAkB,EAClB,mBAAmB,EACnB,MAAM,GACP,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,GAAG,0BAA0B,IAAI,kBAAkB,CAAA;IAC1D,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,GAAG,CAAC,cAAc,EAAE,CAAA;IACpB,GAAG,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAA;IACf,GAAG,CAAC,SAAS,CAAC,CAAC,OAAO,EAAE,SAAS,GAAG,CAAC,GAAG,OAAO,CAAC,CAAA;IAChD,GAAG,CAAC,SAAS,GAAG,QAAQ,CAAA;IACxB,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO,EAAE,GAAG,QAAQ,IAAI,CAAC,CAAA;IAErD,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,OAAO,GAAG,SAAS,CAAC,GAAG,SAAS,CAAC,CAAC,CAAA;IACzE,MAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,GAAG,EAAE,GAAG,SAAS,CAAC,GAAG,SAAS,CAAC,CAAC,CAAA;IAC3E,MAAM,MAAM,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAC,CAAA;IAC1D,MAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,GAAG,EAAE,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAA;IAC9D,MAAM,aAAa,GAAG,MAAM,CAAC,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;IAEhD,IAAI,CAAC,mBAAmB,EAAE,CAAC;QACzB,SAAS,CAAC;YACR,KAAK;YACL,GAAG;YACH,KAAK;YACL,OAAO;YACP,OAAO;YACP,MAAM;YACN,IAAI;YACJ,aAAa;SACd,CAAC,CAAA;IACJ,CAAC;IACD,QAAQ,CAAC;QACP,KAAK;QACL,GAAG;QACH,OAAO;QACP,cAAc;QACd,KAAK;QACL,MAAM;QACN,IAAI;QACJ,aAAa;KACd,CAAC,CAAA;IACF,GAAG,CAAC,cAAc,EAAE,CAAA;AACtB,CAAC;AAED,SAAS,SAAS,CAAC,EACjB,KAAK,EACL,OAAO,EACP,GAAG,EACH,aAAa,EACb,KAAK,EACL,MAAM,EACN,IAAI,GAUL;IACC,MAAM,EACJ,OAAO,EACP,eAAe,EACf,WAAW,EACX,OAAO,EACP,QAAQ,EACR,SAAS,GACV,GAAG,KAAK,CAAA;IAET,KAAK,MAAM,IAAI,IAAI,aAAa,EAAE,CAAC;QACjC,MAAM,EACJ,IAAI,EAAE,EAAE,IAAI,EAAE,GACf,GAAG,IAAI,CAAA;QACR,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QACjB,MAAM,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;QAC9C,IAAI,GAAG,EAAE,CAAC;YACR,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;gBACpC,MAAM,MAAM,GAAG,GAAG,CAAC,CAAC,CAAE,CAAA;gBACtB,MAAM,KAAK,GACT,eAAe,KAAK,0BAA0B;oBAC5C,CAAC,CAAC,gBAAgB;oBACd,8DAA8D;oBAC9D,0BAA0B;oBAC1B,KAAK,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAE,EAC3B,KAAK,CAAC,YAAY,CAAC,MAAM,GAAG,CAAC,CAAE,EAC/B,KAAK,EACL,IAAI,EACJ,MAAM,GAAG,CAAC,CACX;oBACH,CAAC,CAAC,eAAe,KAAK,0BAA0B;wBAC9C,CAAC,CAAC,uBAAuB;wBACrB,qDAAqD;wBACrD,mCAAmC;wBACnC,KAAK,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAE,EAC3B,KAAK,CAAC,YAAY,CAAC,MAAM,GAAG,CAAC,CAAE,EAC/B,KAAK,EACL,IAAI,EACJ,MAAM,GAAG,CAAC,CACX;wBACH,CAAC,CAAC,WAAW,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,CAAA;gBACzC,IAAI,OAAO,EAAE,CAAC;oBACZ,GAAG,CAAC,SAAS,GAAG,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO,CAAA;oBACzD,GAAG,CAAC,QAAQ,CACV,CAAC,GAAG,QAAQ,GAAG,OAAO,GAAG,CAAC,OAAO,GAAG,QAAQ,CAAC,EAC7C,CAAC,GAAG,SAAS,EACb,QAAQ,EACR,SAAS,CACV,CAAA;gBACH,CAAC;YACH,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC;AAED,SAAS,QAAQ,CAAC,EAChB,KAAK,EACL,OAAO,EACP,cAAc,EACd,GAAG,EACH,aAAa,EACb,MAAM,EACN,IAAI,GAUL;IACC,MAAM,EACJ,OAAO,EACP,mBAAmB,EACnB,cAAc,EACd,WAAW,EACX,OAAO,EACP,QAAQ,EACR,iBAAiB,EACjB,SAAS,GACV,GAAG,KAAK,CAAA;IACT,IAAI,cAAc,EAAE,CAAC;QACnB,KAAK,MAAM,IAAI,IAAI,aAAa,EAAE,CAAC;YACjC,MAAM,EACJ,IAAI,EAAE,EAAE,IAAI,EAAE,GACf,GAAG,IAAI,CAAA;YACR,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;YACjB,MAAM,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,CAAC,CAAA;YAC9C,IAAI,GAAG,EAAE,CAAC;gBACR,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;oBACpC,MAAM,MAAM,GAAG,GAAG,CAAC,CAAC,CAAE,CAAA;oBACtB,MAAM,KAAK,GAAG,WAAW,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,CAAA;oBAC/C,MAAM,QAAQ,GAAG,iBAAiB;wBAChC,CAAC,CAAC,cAAc,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,IAAI,OAAO;wBACjD,CAAC,CAAC,OAAO,CAAA;oBACX,MAAM,CAAC,GAAG,CAAC,GAAG,QAAQ,GAAG,OAAO,GAAG,CAAC,OAAO,GAAG,QAAQ,CAAC,CAAA;oBAEvD,kDAAkD;oBAClD,GAAG,CAAC,SAAS,GAAG,mBAAmB;wBACjC,CAAC,CAAC,OAAO;wBACT,CAAC,CAAC,OAAO;4BACP,CAAC,CAAC,QAAQ;4BACV,CAAC,CAAC,KAAK,IAAI,OAAO,CAAA;oBACtB,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,GAAG,QAAQ,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,GAAG,CAAC,CAAC,CAAA;gBAC3D,CAAC;YACH,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC"}
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{"version":3,"file":"TreeBranchMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeBranchMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;
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{"version":3,"file":"TreeBranchMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeBranchMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AAC9C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAWrC,MAAM,cAAc,GAAG,QAAQ,CAAC,UAAU,EACxC,IAAI,EACJ,KAAK,EACL,OAAO,GAKR;IACC,OAAO,CACL,oBAAC,IAAI,IACH,eAAe,EAAC,gBAAgB,EAChC,cAAc,EAAE;YACd,IAAI,EAAE,IAAI,CAAC,CAAC;YACZ,GAAG,EAAE,IAAI,CAAC,CAAC;SACZ,EACD,kBAAkB,EAAE,CAAC,EACrB,WAAW,QACX,IAAI,EAAE,OAAO,CAAC,IAAI,CAAC,EACnB,OAAO,EAAE,OAAO;QAEhB,oBAAC,QAAQ,IAAC,KAAK,QAAC,QAAQ,UACrB,IAAI,CAAC,IAAI,CACD;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,eAAe,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAC9B,OAAO,EAAE,CAAA;YACX,CAAC,IAEA,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;YAChC,CAAC,CAAC,kBAAkB;YACpB,CAAC,CAAC,oBAAoB,CACf;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,KAAK,CAAC,QAAQ,KAAK,IAAI,CAAC,EAAE,EAAE,CAAC;oBAC/B,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;gBAC9B,CAAC;qBAAM,CAAC;oBACN,KAAK,CAAC,WAAW,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAC5B,CAAC;gBACD,OAAO,EAAE,CAAA;YACX,CAAC,IAEA,KAAK,CAAC,QAAQ,KAAK,IAAI,CAAC,EAAE;YACzB,CAAC,CAAC,6BAA6B;YAC/B,CAAC,CAAC,qBAAqB,CAChB,CACN,CACR,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,cAAc,CAAA"}
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@@ -1,5 +1,4 @@
|
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1
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-
import React from 'react';
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2
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-
import { useEffect, useRef, useState } from 'react';
|
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1
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+
import React, { useEffect, useRef, useState } from 'react';
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3
2
|
import { observer } from 'mobx-react';
|
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4
3
|
import TreeCanvasBlock from './TreeCanvasBlock';
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5
4
|
import { padding } from './renderTreeCanvas';
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"TreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,
|
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1
|
+
{"version":3,"file":"TreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAE1D,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,eAAe,MAAM,mBAAmB,CAAA;AAC/C,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAA;AAI5C,MAAM,UAAU,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACtE,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,SAAS,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IAC/B,MAAM,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC,CAAA;IACxB,MAAM,KAAK,GAAG,MAAM,CAAS,CAAC,CAAC,CAAA;IAC/B,MAAM,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IAC5C,MAAM,CAAC,aAAa,EAAE,gBAAgB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAEzD,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,IAAI,GAAG,GAAG,CAAC,OAAO,CAAA;QACxB,IAAI,CAAC,IAAI,EAAE,CAAC;YACV,OAAM;QACR,CAAC;QACD,SAAS,OAAO,CAAC,KAAiB;YAChC,MAAM,CAAC,OAAO,IAAI,KAAK,CAAC,MAAM,CAAA;YAE9B,IAAI,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC;gBACvB,SAAS,CAAC,OAAO,GAAG,IAAI,CAAA;gBACxB,qBAAqB,CAAC,GAAG,EAAE;oBACzB,KAAK,CAAC,SAAS,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAA;oBAChC,MAAM,CAAC,OAAO,GAAG,CAAC,CAAA;oBAClB,SAAS,CAAC,OAAO,GAAG,KAAK,CAAA;gBAC3B,CAAC,CAAC,CAAA;YACJ,CAAC;YACD,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,KAAK,CAAC,eAAe,EAAE,CAAA;QACzB,CAAC;QACD,IAAI,CAAC,gBAAgB,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;QACvC,OAAO,GAAG,EAAE;YACV,IAAI,CAAC,mBAAmB,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;QAC5C,CAAC,CAAA;IACH,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,CAAA;IAEX,SAAS,CAAC,GAAG,EAAE;QACb,IAAI,OAAO,GAAG,GAAG,EAAE,GAAE,CAAC,CAAA;QAEtB,SAAS,eAAe,CAAC,KAAiB;YACxC,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YAC3B,MAAM,SAAS,GAAG,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YACvC,IAAI,SAAS,EAAE,CAAC;gBACd,uEAAuE;gBACvE,MAAM;gBACN,0EAA0E;gBAC1E,IAAI,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC;oBACvB,SAAS,CAAC,OAAO,GAAG,IAAI,CAAA;oBACxB,MAAM,CAAC,qBAAqB,CAAC,GAAG,EAAE;wBAChC,KAAK,CAAC,SAAS,CAAC,SAAS,CAAC,CAAA;wBAC1B,SAAS,CAAC,OAAO,GAAG,KAAK,CAAA;wBACzB,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;oBAC/B,CAAC,CAAC,CAAA;gBACJ,CAAC;YACH,CAAC;QACH,CAAC;QAED,SAAS,aAAa;YACpB,KAAK,CAAC,OAAO,GAAG,CAAC,CAAA;YACjB,IAAI,aAAa,EAAE,CAAC;gBAClB,gBAAgB,CAAC,KAAK,CAAC,CAAA;YACzB,CAAC;QACH,CAAC;QAED,IAAI,aAAa,EAAE,CAAC;YAClB,MAAM,CAAC,gBAAgB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;YAC3D,MAAM,CAAC,gBAAgB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YACvD,OAAO,GAAG,GAAG,EAAE;gBACb,MAAM,CAAC,mBAAmB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;gBAC9D,MAAM,CAAC,mBAAmB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YAC5D,CAAC,CAAA;QACH,CAAC;QACD,OAAO,OAAO,CAAA;IAChB,CAAC,EAAE,CAAC,KAAK,EAAE,aAAa,CAAC,CAAC,CAAA;IAE1B,SAAS,SAAS,CAAC,KAAuB;QACxC,2DAA2D;QAC3D,MAAM,MAAM,GAAG,KAAK,CAAC,MAAqB,CAAA;QAC1C,IAAI,MAAM,CAAC,SAAS,IAAI,MAAM,CAAC,OAAO,CAAC,OAAO,EAAE,CAAC;YAC/C,OAAM;QACR,CAAC;QAED,qCAAqC;QACrC,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACvB,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;YAC7B,gBAAgB,CAAC,IAAI,CAAC,CAAA;QACxB,CAAC;IACH,CAAC;IAED,OAAO,CACL,6BACE,GAAG,EAAE,GAAG,EACR,WAAW,EAAE,SAAS,EACtB,SAAS,EAAE,KAAK,CAAC,EAAE;YACjB,+DAA+D;YAC/D,uEAAuE;YACvE,aAAa;YACb,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,gBAAgB,CAAC,KAAK,CAAC,CAAA;QACzB,CAAC,EACD,YAAY,EAAE,KAAK,CAAC,EAAE;YACpB,KAAK,CAAC,cAAc,EAAE,CAAA;QACxB,CAAC,EACD,KAAK,EAAE;YACL,MAAM;YACN,QAAQ,EAAE,UAAU;YACpB,KAAK,EAAE,SAAS,GAAG,OAAO;SAC3B,IAEA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CACpB,oBAAC,eAAe,IAAC,GAAG,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,KAAK,GAAI,CAC9D,CAAC,CACE,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,UAAU,CAAA"}
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@@ -1,15 +1,14 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
|
-
import {
|
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1
|
+
import React, { useCallback, useEffect, useRef, useState } from 'react';
|
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2
|
+
import { useTheme } from '@mui/material';
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3
3
|
import { autorun } from 'mobx';
|
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4
4
|
import { observer } from 'mobx-react';
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5
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-
import { useTheme } from '@mui/material';
|
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6
5
|
import RBush from 'rbush';
|
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7
|
-
import TreeNodeMenu from './TreeNodeMenu';
|
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8
6
|
import TreeBranchMenu from './TreeBranchMenu';
|
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7
|
+
import TreeNodeMenu from './TreeNodeMenu';
|
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9
8
|
import { padding, renderTreeCanvas } from './renderTreeCanvas';
|
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10
9
|
const TreeCanvasBlock = observer(function ({ model, offsetY, }) {
|
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11
10
|
const theme = useTheme();
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12
|
-
const ref = useRef();
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11
|
+
const ref = useRef(null);
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13
12
|
const clickMap = useRef(new RBush());
|
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14
13
|
const mouseoverRef = useRef(null);
|
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15
14
|
const [branchMenu, setBranchMenu] = useState();
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@@ -1 +1 @@
|
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|
1
|
-
{"version":3,"file":"TreeCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvasBlock.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,
|
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1
|
+
{"version":3,"file":"TreeCanvasBlock.js","sourceRoot":"","sources":["../../../src/components/tree/TreeCanvasBlock.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,WAAW,EAAE,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAEvE,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AACxC,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAC9B,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,cAAc,MAAM,kBAAkB,CAAA;AAC7C,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,EAAE,OAAO,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAA;AAqB9D,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EACzC,KAAK,EACL,OAAO,GAIR;IACC,MAAM,KAAK,GAAG,QAAQ,EAAE,CAAA;IACxB,MAAM,GAAG,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IAC3C,MAAM,QAAQ,GAAG,MAAM,CAAC,IAAI,KAAK,EAAc,CAAC,CAAA;IAChD,MAAM,YAAY,GAAG,MAAM,CAAoB,IAAI,CAAC,CAAA;IACpD,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,QAAQ,EAAe,CAAA;IAC3D,MAAM,CAAC,cAAc,EAAE,iBAAiB,CAAC,GAAG,QAAQ,EAAe,CAAA;IACnE,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,EAAc,CAAA;IAEtD,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,kBAAkB,EAAE,GAAG,KAAK,CAAA;IAEvE,MAAM,KAAK,GAAG,aAAa,GAAG,OAAO,CAAA;IACrC,MAAM,MAAM,GAAG,SAAS,CAAA;IACxB,MAAM,EAAE,GAAG,KAAK,GAAG,kBAAkB,CAAA;IACrC,MAAM,EAAE,GAAG,MAAM,GAAG,kBAAkB,CAAA;IAEtC,2DAA2D;IAC3D,MAAM,IAAI,GAAG,WAAW,CACtB,CAAC,GAAsB,EAAE,EAAE;QACzB,KAAK,CAAC,YAAY,EAAE,CAAA;QACpB,GAAG,CAAC,OAAO,GAAG,GAAG,CAAA;IACnB,CAAC;IACD,uDAAuD;IACvD,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CACvB,CAAA;IACD,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QACzC,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QAED,OAAO,OAAO,CAAC,GAAG,EAAE;YAClB,gBAAgB,CAAC;gBACf,GAAG;gBACH,KAAK;gBACL,OAAO;gBACP,QAAQ,EAAE,QAAQ,CAAC,OAAO;gBAC1B,KAAK;aACN,CAAC,CAAA;QACJ,CAAC,CAAC,CAAA;IACJ,CAAC,EAAE,CAAC,KAAK,EAAE,OAAO,EAAE,KAAK,CAAC,CAAC,CAAA;IAE3B,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,GAAG,GAAG,YAAY,CAAC,OAAO,EAAE,UAAU,CAAC,IAAI,CAAC,CAAA;QAClD,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAM;QACR,CAAC;QAED,GAAG,CAAC,cAAc,EAAE,CAAA;QACpB,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,EAAE,aAAa,GAAG,OAAO,EAAE,SAAS,CAAC,CAAA;QACvD,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,CAAA;QAE1B,IAAI,QAAQ,EAAE,CAAC;YACb,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,QAAQ,CAAA;YAE3C,GAAG,CAAC,SAAS,GAAG,iBAAiB,CAAA;YACjC,GAAG,CAAC,QAAQ,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,GAAG,IAAI,EAAE,IAAI,GAAG,IAAI,CAAC,CAAA;QACpD,CAAC;IACH,CAAC,EAAE,CAAC,QAAQ,EAAE,OAAO,EAAE,SAAS,EAAE,aAAa,CAAC,CAAC,CAAA;IAEjD,SAAS,mBAAmB,CAAC,KAAuB;QAClD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QAEnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,EAAE,MAAM;YAClB,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IAED,SAAS,iBAAiB,CAAC,KAAuB;QAChD,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,GAAG,KAAK,CAAC,WAAW,CAAC,OAAO,CAAA;QACnC,MAAM,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC;YACtC,IAAI,EAAE,CAAC;YACP,IAAI,EAAE,CAAC,GAAG,CAAC;YACX,IAAI,EAAE,CAAC,GAAG,OAAO;YACjB,IAAI,EAAE,CAAC,GAAG,CAAC,GAAG,OAAO;SACtB,CAAC,CAAA;QAEF,OAAO,KAAK,IAAI,CAAC,KAAK,CAAC,MAAM;YAC3B,CAAC,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE;YAClD,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IACD,MAAM,KAAK,GAAG;QACZ,KAAK;QACL,MAAM;QACN,GAAG,EAAE,OAAO,GAAG,OAAO;QACtB,IAAI,EAAE,CAAC;QACP,QAAQ,EAAE,UAAU;KACZ,CAAA;IACV,OAAO,CACL;QACG,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAChB,oBAAC,cAAc,IACb,IAAI,EAAE,UAAU,EAChB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,GAAG,EAAE;gBACZ,aAAa,CAAC,SAAS,CAAC,CAAA;YAC1B,CAAC,GACD,CACH,CAAC,CAAC,CAAC,IAAI;QAEP,cAAc,EAAE,EAAE,CAAC,CAAC,CAAC,CACpB,oBAAC,YAAY,IACX,IAAI,EAAE,cAAc,EACpB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,GAAG,EAAE;gBACZ,iBAAiB,CAAC,SAAS,CAAC,CAAA;YAC9B,CAAC,GACD,CACH,CAAC,CAAC,CAAC,IAAI;QAER,gCACE,KAAK,EAAE,EAAE,EACT,MAAM,EAAE,EAAE,EACV,KAAK,EAAE,KAAK,EACZ,WAAW,EAAE,KAAK,CAAC,EAAE;gBACnB,IAAI,CAAC,GAAG,CAAC,OAAO,EAAE,CAAC;oBACjB,OAAM;gBACR,CAAC;gBAED,MAAM,GAAG,GAAG,iBAAiB,CAAC,KAAK,CAAC,IAAI,mBAAmB,CAAC,KAAK,CAAC,CAAA;gBAClE,GAAG,CAAC,OAAO,CAAC,KAAK,CAAC,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAA;gBACtD,WAAW,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,CAAA;YACvC,CAAC,EACD,OAAO,EAAE,KAAK,CAAC,EAAE;gBACf,MAAM,EAAE,OAAO,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,EAAE,GAAG,KAAK,CAAA;gBAExC,MAAM,IAAI,GAAG,mBAAmB,CAAC,KAAK,CAAC,CAAA;gBACvC,IAAI,IAAI,EAAE,EAAE,EAAE,CAAC;oBACb,aAAa,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE,EAAE,IAAI,CAAC,EAAE,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,CAAC,CAAA;gBACvD,CAAC;gBAED,MAAM,KAAK,GAAG,iBAAiB,CAAC,KAAK,CAAC,CAAA;gBACtC,IAAI,KAAK,EAAE,EAAE,EAAE,CAAC;oBACd,iBAAiB,CAAC,EAAE,GAAG,KAAK,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAA;gBACvC,CAAC;YACH,CAAC,EACD,YAAY,EAAE,GAAG,EAAE;gBACjB,WAAW,CAAC,SAAS,CAAC,CAAA;YACxB,CAAC,EACD,GAAG,EAAE,IAAI,GACT;QACF,gCACE,KAAK,EAAE;gBACL,GAAG,KAAK;gBACR,aAAa,EAAE,MAAM;gBACrB,MAAM,EAAE,GAAG;aACZ,EACD,KAAK,EAAE,KAAK,EACZ,MAAM,EAAE,MAAM,EACd,GAAG,EAAE,YAAY,GACjB,CACD,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,eAAe,CAAA"}
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@@ -38,7 +38,11 @@ const TreeMenu = observer(function ({ node, onClose, model, }) {
|
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|
38
38
|
onClose();
|
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39
39
|
} }, collapsed.includes(node.id) || collapsedLeaves.includes(node.id)
|
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40
40
|
? 'Show node'
|
|
41
|
-
: 'Hide node')
|
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41
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+
: 'Hide node'),
|
|
42
|
+
React.createElement(MenuItem, { dense: true, onClick: () => {
|
|
43
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+
model.drawRelativeTo(node.id);
|
|
44
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+
onClose();
|
|
45
|
+
} }, "Indicate differences from this row")));
|
|
42
46
|
});
|
|
43
47
|
export default TreeMenu;
|
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44
48
|
//# sourceMappingURL=TreeNodeMenu.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"TreeNodeMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeNodeMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;
|
|
1
|
+
{"version":3,"file":"TreeNodeMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeNodeMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AAEnC,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AAC9C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,SAAS;AACT,MAAM,kBAAkB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,8BAA8B,CAAC,CAAC,CAAA;AAE7E,MAAM,QAAQ,GAAG,QAAQ,CAAC,UAAU,EAClC,IAAI,EACJ,OAAO,EACP,KAAK,GAUN;IACC,MAAM,EAAE,SAAS,EAAE,eAAe,EAAE,GAAG,KAAK,CAAA;IAC5C,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAA;IACrB,OAAO,CACL,oBAAC,IAAI,IACH,eAAe,EAAC,gBAAgB,EAChC,cAAc,EAAE;YACd,GAAG,EAAE,IAAI,CAAC,CAAC;YACX,IAAI,EAAE,IAAI,CAAC,CAAC;SACb,EACD,kBAAkB,EAAE,CAAC,EACrB,WAAW,QACX,IAAI,EAAE,OAAO,CAAC,IAAI,CAAC,EACnB,OAAO,EAAE,OAAO;QAEhB,oBAAC,QAAQ,IAAC,KAAK,QAAC,QAAQ,UACrB,IAAI,CACI;QAEX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;oBAC3B,kBAAkB;oBAClB;wBACE,IAAI,EAAE,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC;wBAC5B,KAAK;wBACL,QAAQ,EAAE,IAAI;wBACd,OAAO;qBACR;iBACF,CAAC,CAAA;gBACF,OAAO,EAAE,CAAA;YACX,CAAC,mBAGQ;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;oBAChC,KAAK,CAAC,eAAe,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAChC,CAAC;qBAAM,CAAC;oBACN,IAAI,IAAI,CAAC,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC,EAAE,CAAC;wBAClC,KAAK,CAAC,gBAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;oBACjC,CAAC;yBAAM,CAAC;wBACN,KAAK,CAAC,gBAAgB,CAAC,GAAG,IAAI,CAAC,EAAE,WAAW,CAAC,CAAA;oBAC/C,CAAC;gBACH,CAAC;gBACD,OAAO,EAAE,CAAA;YACX,CAAC,IAEA,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,eAAe,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;YAC/D,CAAC,CAAC,WAAW;YACb,CAAC,CAAC,WAAW,CACN;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,cAAc,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAC7B,OAAO,EAAE,CAAA;YACX,CAAC,yCAGQ,CACN,CACR,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,QAAQ,CAAA"}
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@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"TreePanel.js","sourceRoot":"","sources":["../../../src/components/tree/TreePanel.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;
|
|
1
|
+
{"version":3,"file":"TreePanel.js","sourceRoot":"","sources":["../../../src/components/tree/TreePanel.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,UAAU,MAAM,cAAc,CAAA;AAIrC,MAAM,SAAS,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACrE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAC/B,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,QAAQ,EAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,EAAE,KAAK,EAAE,aAAa,EAAE;QACrE,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CACxB,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,SAAS,CAAA"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"TreeRuler.js","sourceRoot":"","sources":["../../../src/components/tree/TreeRuler.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;
|
|
1
|
+
{"version":3,"file":"TreeRuler.js","sourceRoot":"","sources":["../../../src/components/tree/TreeRuler.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,MAAM,SAAS,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAA2B,EAAE,EAAE;IAChE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAC/B,OAAO,6BAAK,KAAK,EAAE,EAAE,UAAU,EAAE,CAAC,EAAE,KAAK,EAAE,aAAa,EAAE,GAAI,CAAA;AAChE,CAAC,CAAC,CAAA;AAEF,eAAe,SAAS,CAAA"}
|
|
@@ -1,8 +1,9 @@
|
|
|
1
1
|
import React from 'react';
|
|
2
|
+
import Attributes from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail/Attributes';
|
|
3
|
+
import BaseCard from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail/BaseCard';
|
|
2
4
|
import { Dialog } from '@jbrowse/core/ui';
|
|
3
5
|
import { DialogContent } from '@mui/material';
|
|
4
6
|
import { observer } from 'mobx-react';
|
|
5
|
-
import { Attributes, BaseCard, } from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail';
|
|
6
7
|
import SequenceTextArea from '../../SequenceTextArea';
|
|
7
8
|
const TreeNodeInfoDialog = observer(function ({ info, model, nodeName, onClose, }) {
|
|
8
9
|
const { treeMetadata, rows } = model;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"TreeNodeInfoDialog.js","sourceRoot":"","sources":["../../../../src/components/tree/dialogs/TreeNodeInfoDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;
|
|
1
|
+
{"version":3,"file":"TreeNodeInfoDialog.js","sourceRoot":"","sources":["../../../../src/components/tree/dialogs/TreeNodeInfoDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,OAAO,UAAU,MAAM,8DAA8D,CAAA;AACrF,OAAO,QAAQ,MAAM,4DAA4D,CAAA;AACjF,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,aAAa,EAAE,MAAM,eAAe,CAAA;AAC7C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,gBAAgB,MAAM,wBAAwB,CAAA;AAIrD,MAAM,kBAAkB,GAAG,QAAQ,CAAC,UAAU,EAC5C,IAAI,EACJ,KAAK,EACL,QAAQ,EACR,OAAO,GAMR;IACC,MAAM,EAAE,YAAY,EAAE,IAAI,EAAE,GAAG,KAAK,CAAA;IACpC,MAAM,QAAQ,GAAG,YAAY,CAAC,QAAQ,CAAC,CAAA;IACvC,MAAM,GAAG,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,QAAQ,CAAC,CAAA;IAC7C,OAAO,CACL,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;YACZ,OAAO,EAAE,CAAA;QACX,CAAC,EACD,IAAI,QACJ,KAAK,EAAC,gBAAgB,EACtB,QAAQ,EAAC,IAAI;QAEb,oBAAC,aAAa;YACZ,oBAAC,QAAQ,IAAC,KAAK,EAAC,YAAY;gBAC1B,oBAAC,UAAU,IAAC,UAAU,EAAE,EAAE,QAAQ,EAAE,GAAG,IAAI,EAAE,GAAI,CACxC;YACX,oBAAC,QAAQ,IAAC,KAAK,EAAC,UAAU,IACvB,GAAG,CAAC,CAAC,CAAC,CACL,oBAAC,gBAAgB,IAAC,GAAG,EAAE,CAAC,GAAG,CAAC,GAAI,CACjC,CAAC,CAAC,CAAC,CACF,sDAA6B,CAC9B,CACQ;YACV,QAAQ,CAAC,CAAC,CAAC,CACV,oBAAC,QAAQ,IAAC,KAAK,EAAC,gBAAgB;gBAC9B,oBAAC,UAAU,IAAC,UAAU,EAAE,QAAQ,GAAI,CAC3B,CACZ,CAAC,CAAC,CAAC,IAAI,CACM,CACT,CACV,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,kBAAkB,CAAA"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import type RBush from 'rbush';
|
|
2
|
-
import type { Theme } from '@mui/material';
|
|
3
1
|
import type { MsaViewModel } from '../../model';
|
|
2
|
+
import type { Theme } from '@mui/material';
|
|
3
|
+
import type RBush from 'rbush';
|
|
4
4
|
export declare const padding = 600;
|
|
5
5
|
interface ClickEntry {
|
|
6
6
|
name: string;
|
|
@@ -136,11 +136,11 @@ export function renderTreeCanvas({ model, clickMap, ctx, offsetY, theme, highRes
|
|
|
136
136
|
} = model;
|
|
137
137
|
const by = blockSizeYOverride || blockSize;
|
|
138
138
|
ctx.resetTransform();
|
|
139
|
-
// this is a bogus use of nref, it is never less than 0. we just are using
|
|
140
|
-
// in this statement because otherwise it would be an unused variable,
|
|
141
|
-
// just need to use nref to indicate a redraw in an autorun when canvas
|
|
142
|
-
// is updated and in order to convince bundlers like not to delete
|
|
143
|
-
// usage with propertyReadSideEffects
|
|
139
|
+
// this is a bogus use of nref, it is never less than 0. we just are using
|
|
140
|
+
// it in this statement because otherwise it would be an unused variable,
|
|
141
|
+
// we just need to use nref to indicate a redraw in an autorun when canvas
|
|
142
|
+
// ref is updated and in order to convince bundlers like not to delete
|
|
143
|
+
// unused usage with propertyReadSideEffects
|
|
144
144
|
const k = nref < 0
|
|
145
145
|
? Number.NEGATIVE_INFINITY
|
|
146
146
|
: highResScaleFactorOverride || highResScaleFactor;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"renderTreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/renderTreeCanvas.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"renderTreeCanvas.js","sourceRoot":"","sources":["../../../src/components/tree/renderTreeCanvas.ts"],"names":[],"mappings":"AAIA,MAAM,CAAC,MAAM,OAAO,GAAG,GAAG,CAAA;AAE1B,MAAM,YAAY,GAAG,CAAC,CAAA;AACtB,MAAM,MAAM,GAAG,GAAG,CAAA;AAClB,MAAM,CAAC,GAAG,MAAM,GAAG,CAAC,CAAA;AAYpB,MAAM,UAAU,UAAU,CAAC,EACzB,OAAO,EACP,GAAG,EACH,KAAK,EACL,KAAK,EACL,kBAAkB,GAOnB;IACC,MAAM,EAAE,SAAS,EAAE,aAAa,EAAE,SAAS,EAAE,GAAG,KAAK,CAAA;IACrD,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,GAAG,CAAC,WAAW,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAA;IAC5C,KAAK,MAAM,IAAI,IAAI,SAAS,CAAC,KAAK,EAAE,EAAE,CAAC;QACrC,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,CAAA;QAC/B,IAAI,MAAM,CAAC,MAAM,KAAK,CAAC,IAAI,CAAC,aAAa,EAAE,CAAC;YAC1C,SAAQ;QACV,CAAC;QACD,MAAM,EAAE,GAAG,MAAM,CAAC,CAAE,CAAA;QACpB,MAAM,EAAE,GAAG,MAAM,CAAC,CAAE,CAAA;QACpB,mBAAmB;QACnB,MAAM,EAAE,GAAG,aAAa,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAA;QAChD,mBAAmB;QACnB,MAAM,EAAE,GAAG,aAAa,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAA;QAEhD,MAAM,EAAE,GAAG,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,EAAE,CAAC,CAAA;QAC3B,MAAM,EAAE,GAAG,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,EAAE,CAAC,CAAA;QAC3B,yEAAyE;QACzE,0EAA0E;QAC1E,QAAQ;QACR,IAAI,OAAO,GAAG,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,OAAO,EAAE,CAAC;YACxC,GAAG,CAAC,SAAS,EAAE,CAAA;YACf,GAAG,CAAC,MAAM,CAAC,EAAE,EAAE,EAAE,CAAC,CAAA;YAClB,GAAG,CAAC,MAAM,CAAC,EAAE,EAAE,EAAE,CAAC,CAAA;YAClB,GAAG,CAAC,MAAM,CAAC,EAAE,EAAE,EAAE,CAAC,CAAA;YAClB,GAAG,CAAC,MAAM,EAAE,CAAA;QACd,CAAC;IACH,CAAC;AACH,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,EAChC,GAAG,EACH,QAAQ,EACR,OAAO,EACP,KAAK,EACL,kBAAkB,GAQnB;IACC,MAAM,EACJ,SAAS,EACT,aAAa,EACb,SAAS,EACT,SAAS,EACT,UAAU,EAAE,EAAE,GACf,GAAG,KAAK,CAAA;IACT,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,KAAK,MAAM,IAAI,IAAI,SAAS,CAAC,WAAW,EAAE,EAAE,CAAC;QAC3C,MAAM,GAAG,GAAG,aAAa,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,GAAG,CAAA;QACvC,mBAAmB;QACnB,MAAM,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,IAAI,EAAE,GAAG,IAAI,CAAA;QAC/B,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QACjB,MAAM,EAAE,EAAE,GAAG,EAAE,EAAE,IAAI,GAAG,EAAE,EAAE,GAAG,IAAI,CAAA;QACnC,IACE,IAAI,CAAC,MAAM,GAAG,CAAC;YACf,CAAC,GAAG,OAAO,GAAG,YAAY;YAC1B,CAAC,GAAG,OAAO,GAAG,EAAE,GAAG,YAAY,EAC/B,CAAC;YACD,GAAG,CAAC,WAAW,GAAG,OAAO,CAAA;YACzB,GAAG,CAAC,SAAS,GAAG,SAAS,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,CAAA;YAC1D,GAAG,CAAC,SAAS,EAAE,CAAA;YACf,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,EAAE,CAAC,CAAA;YACrC,GAAG,CAAC,IAAI,EAAE,CAAA;YACV,GAAG,CAAC,MAAM,EAAE,CAAA;YAEZ,QAAQ,EAAE,MAAM,CAAC;gBACf,IAAI,EAAE,CAAC,GAAG,MAAM,GAAG,EAAE;gBACrB,IAAI,EAAE,CAAC,GAAG,MAAM,GAAG,CAAC,GAAG,EAAE;gBACzB,IAAI,EAAE,CAAC,GAAG,MAAM;gBAChB,IAAI,EAAE,CAAC,GAAG,MAAM,GAAG,CAAC;gBACpB,MAAM,EAAE,IAAI;gBACZ,EAAE;gBACF,IAAI;aACL,CAAC,CAAA;QACJ,CAAC;IACH,CAAC;AACH,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,EAC/B,KAAK,EACL,KAAK,EACL,OAAO,EACP,GAAG,EACH,QAAQ,EACR,kBAAkB,GAQnB;IACC,MAAM,EACJ,QAAQ,EACR,aAAa,EACb,YAAY,EACZ,SAAS,EACT,SAAS,EACT,eAAe,EACf,SAAS,EACT,gBAAgB,EAChB,QAAQ,EACR,aAAa,EACb,SAAS,EACT,wBAAwB,EACxB,UAAU,EACV,MAAM,EACN,MAAM,GACP,GAAG,KAAK,CAAA;IACT,MAAM,EAAE,GAAG,kBAAkB,IAAI,SAAS,CAAA;IAC1C,IAAI,gBAAgB,EAAE,CAAC;QACrB,GAAG,CAAC,SAAS,GAAG,OAAO,CAAA;QACvB,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAA;IACzB,CAAC;SAAM,CAAC;QACN,GAAG,CAAC,SAAS,GAAG,OAAO,CAAA;IACzB,CAAC;IACD,KAAK,MAAM,IAAI,IAAI,MAAM,EAAE,CAAC;QAC1B,MAAM,EACJ,IAAI,EAAE,EAAE,IAAI,EAAE,EAAE,EAAE;QAClB,mBAAmB;QACnB,GAAG,GACJ,GAAG,IAAI,CAAA;QACR,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QACjB,MAAM,CAAC,GAAG,IAAI,CAAC,CAAE,CAAA;QAEjB,MAAM,WAAW,GAAG,YAAY,CAAC,IAAI,CAAC,EAAE,MAAM,IAAI,IAAI,CAAA;QACtD,IAAI,CAAC,GAAG,OAAO,GAAG,YAAY,IAAI,CAAC,GAAG,OAAO,GAAG,EAAE,GAAG,YAAY,EAAE,CAAC;YAClE,sDAAsD;YACtD,MAAM,EAAE,GAAG,CAAC,GAAG,QAAQ,GAAG,CAAC,CAAA;YAC3B,IAAI,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;YACvC,IACE,CAAC,aAAa;gBACd,CAAC,SAAS,CAAC,QAAQ,CAAC,EAAE,CAAC;gBACvB,CAAC,eAAe,CAAC,QAAQ,CAAC,EAAE,CAAC,EAC7B,CAAC;gBACD,sEAAsE;gBACtE,sEAAsE;gBACtE,qEAAqE;gBACrE,oBAAoB;gBACpB,EAAE,IAAI,SAAS,GAAG,SAAS,CAAC,MAAM,CAAA;YACpC,CAAC;YAED,MAAM,EAAE,KAAK,EAAE,GAAG,GAAG,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;YAC9C,MAAM,MAAM,GAAG,GAAG,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,KAAK,CAAA,CAAC,yBAAyB;YAEnE,GAAG,CAAC,SAAS,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAA;YAC1C,IAAI,gBAAgB,EAAE,CAAC;gBACrB,MAAM,YAAY,GAAG,CAAC,CAAA;gBACtB,MAAM,MAAM,GAAG,wBAAwB,GAAG,YAAY,CAAA;gBACtD,IAAI,QAAQ,IAAI,CAAC,MAAM,EAAE,CAAC;oBACxB,MAAM,EAAE,KAAK,EAAE,GAAG,GAAG,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;oBAC9C,GAAG,CAAC,MAAM,CAAC,EAAE,GAAG,MAAM,GAAG,CAAC,EAAE,CAAC,CAAC,CAAA;oBAC9B,GAAG,CAAC,MAAM,CAAC,MAAM,GAAG,YAAY,GAAG,KAAK,EAAE,CAAC,CAAC,CAAA;oBAC5C,GAAG,CAAC,MAAM,EAAE,CAAA;gBACd,CAAC;gBACD,GAAG,CAAC,QAAQ,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,CAAC,CAAA;gBACrC,QAAQ,EAAE,MAAM,CAAC;oBACf,IAAI,EAAE,aAAa,GAAG,KAAK;oBAC3B,IAAI,EAAE,aAAa;oBACnB,IAAI,EAAE,EAAE,GAAG,MAAM;oBACjB,IAAI,EAAE,EAAE;oBACR,IAAI;oBACJ,EAAE;iBACH,CAAC,CAAA;YACJ,CAAC;iBAAM,CAAC;gBACN,GAAG,CAAC,QAAQ,CAAC,WAAW,EAAE,EAAE,GAAG,CAAC,EAAE,EAAE,CAAC,CAAA;gBACrC,QAAQ,EAAE,MAAM,CAAC;oBACf,I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|
package/dist/index.d.ts
CHANGED
|
@@ -1,2 +1,2 @@
|
|
|
1
1
|
export { default as MSAView } from './components/Loading';
|
|
2
|
-
export { default as MSAModelF
|
|
2
|
+
export { type MsaViewModel, default as MSAModelF } from './model';
|
package/dist/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,OAAO,EAAE,MAAM,sBAAsB,CAAA;AACzD,OAAO,
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,OAAO,EAAE,MAAM,sBAAsB,CAAA;AACzD,OAAO,EAAqB,OAAO,IAAI,SAAS,EAAE,MAAM,SAAS,CAAA"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"launchInterProScan.js","sourceRoot":"","sources":["../src/launchInterProScan.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;
|
|
1
|
+
{"version":3,"file":"launchInterProScan.js","sourceRoot":"","sources":["../src/launchInterProScan.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAE/C,OAAO,EAAE,SAAS,EAAE,SAAS,EAAE,OAAO,EAAE,MAAM,cAAc,CAAA;AAI5D,MAAM,IAAI,GAAG,2CAA2C,CAAA;AAmBxD,KAAK,UAAU,eAAe,CAAC,EAC7B,GAAG,EACH,UAAU,EACV,OAAO,EACP,QAAQ,EACR,KAAK,GAON;IACC,MAAM,KAAK,GAAG,MAAM,SAAS,CAAC,GAAG,IAAI,eAAe,EAAE;QACpD,MAAM,EAAE,MAAM;QACd,IAAI,EAAE,IAAI,eAAe,CAAC;YACxB,KAAK,EAAE,uBAAuB;YAC9B,QAAQ,EAAE,GAAG;YACb,QAAQ,EAAE,QAAQ,CAAC,IAAI,CAAC,GAAG,CAAC;SAC7B,CAAC;KACH,CAAC,CAAA;IACF,OAAO,EAAE,CAAC,KAAK,CAAC,CAAA;IAChB,MAAM,IAAI,CAAC;QACT,KAAK;QACL,UAAU;KACX,CAAC,CAAA;IACF,MAAM,iCAAiC,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,CAAA;AAC3D,CAAC;AAED,MAAM,UAAU,uBAAuB,CAAC,KAAa;IACnD,OAAO,SAAS,CACd,GAAG,IAAI,oBAAoB,KAAK,OAAO,CACxC,CAAA;AACH,CAAC;AAED,KAAK,UAAU,IAAI,CAAC,EAClB,UAAU,EACV,KAAK,GAIN;IACC,MAAM,GAAG,GAAG,GAAG,IAAI,oBAAoB,KAAK,EAAE,CAAA;IAC9C,IAAI,CAAC;QACH,uEAAuE;QACvE,OAAO,IAAI,EAAE,CAAC;YACZ,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC;gBAC5B,MAAM,OAAO,CAAC,IAAI,CAAC,CAAA;gBACnB,UAAU,CAAC,EAAE,GAAG,EAAE,mBAAmB,EAAE,GAAG,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,CAAA;YACvD,CAAC;YACD,MAAM,MAAM,GAAG,MAAM,SAAS,CAAC,GAAG,CAAC,CAAA;YACnC,IAAI,MAAM,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC;gBAChC,MAAK;YACP,CAAC;YACD,IAAI,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,EAAE,CAAC;gBAC/B,MAAM,IAAI,KAAK,CAAC,wBAAwB,KAAK,EAAE,CAAC,CAAA;YAClD,CAAC;QACH,CAAC;IACH,CAAC;YAAS,CAAC;QACT,UAAU,EAAE,CAAA;IACd,CAAC;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,kBAAkB,CAAC,EACvC,SAAS,EACT,GAAG,EACH,QAAQ,EACR,OAAO,EACP,UAAU,EACV,KAAK,GAQN;IACC,IAAI,CAAC;QACH,UAAU,CAAC,EAAE,GAAG,EAAE,aAAa,SAAS,MAAM,EAAE,CAAC,CAAA;QACjD,IAAI,SAAS,KAAK,cAAc,EAAE,CAAC;YACjC,MAAM,eAAe,CAAC;gBACpB,GAAG;gBACH,OAAO;gBACP,UAAU;gBACV,QAAQ;gBACR,KAAK;aACN,CAAC,CAAA;QACJ,CAAC;QACD,MAAM,IAAI,KAAK,CAAC,mBAAmB,CAAC,CAAA;IACtC,CAAC;YAAS,CAAC;QACT,UAAU,EAAE,CAAA;IACd,CAAC;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,iCAAiC,CAAC,EACtD,KAAK,EACL,KAAK,GAIN;IACC,IAAI,CAAC;QACH,KAAK,CAAC,SAAS,CAAC;YACd,GAAG,EAAE,0BAA0B,KAAK,iGAAiG;YACrI,GAAG,EAAE,6DAA6D,KAAK,OAAO;SAC/E,CAAC,CAAA;QACF,MAAM,GAAG,GAAG,MAAM,uBAAuB,CAAC,KAAK,CAAC,CAAA;QAChD,KAAK,CAAC,sBAAsB,CAC1B,MAAM,CAAC,WAAW,CAAC,GAAG,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAC7D,CAAA;QACD,KAAK,CAAC,cAAc,CAAC,IAAI,CAAC,CAAA;QAC1B,UAAU,CAAC,KAAK,CAAC,CAAC,MAAM,CAAC,uBAAuB,KAAK,UAAU,EAAE,SAAS,CAAC,CAAA;IAC7E,CAAC;IAAC,OAAO,CAAC,EAAE,CAAC;QACX,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;QAChB,UAAU,CAAC,KAAK,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAAC,CAAA;IAC1C,CAAC;YAAS,CAAC;QACT,KAAK,CAAC,SAAS,EAAE,CAAA;IACnB,CAAC;AACH,CAAC"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"DialogQueue.js","sourceRoot":"","sources":["../../src/model/DialogQueue.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"DialogQueue.js","sourceRoot":"","sources":["../../src/model/DialogQueue.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAIvC;;GAEG;AACH,MAAM,UAAU,uBAAuB;IACrC,OAAO,KAAK;SACT,KAAK,CAAC,yBAAyB,EAAE,EAAE,CAAC;SACpC,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;QACf,cAAc,EAAE,EAAkC;KACnD,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd;;WAEG;QACH,IAAI,eAAe;YACjB,OAAO,IAAI,CAAC,cAAc,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAA;QACpC,CAAC;QACD;;WAEG;QACH,IAAI,WAAW;YACb,OAAO,IAAI,CAAC,cAAc,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAA;QACpC,CAAC;KACF,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;WAEG;QACH,kBAAkB;YAChB,IAAI,CAAC,cAAc,GAAG,IAAI,CAAC,cAAc,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;QACpD,CAAC;QACD;;WAEG;QACH,WAAW,CACT,EAAgE;YAEhE,MAAM,CAAC,SAAS,EAAE,KAAK,CAAC,GAAG,EAAE,CAAC,GAAG,EAAE;gBACjC,IAAI,CAAC,kBAAkB,EAAE,CAAA;YAC3B,CAAC,CAAC,CAAA;YACF,IAAI,CAAC,cAAc,GAAG,CAAC,GAAG,IAAI,CAAC,cAAc,EAAE,CAAC,SAAS,EAAE,KAAK,CAAC,CAAC,CAAA;QACpE,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC"}
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
export declare function
|
|
1
|
+
export declare function TreeModelF(): import("mobx-state-tree").IModelType<{
|
|
2
2
|
drawLabels: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
3
3
|
labelsAlignRight: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
4
4
|
treeAreaWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
|
package/dist/model/treeModel.js
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"treeModel.js","sourceRoot":"","sources":["../../src/model/treeModel.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAEvC;;GAEG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,UAAU,
|
|
1
|
+
{"version":3,"file":"treeModel.js","sourceRoot":"","sources":["../../src/model/treeModel.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAEvC;;GAEG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,UAAU,UAAU;IACxB,OAAO,KAAK;SACT,KAAK,CAAC;QACL;;WAEG;QACH,UAAU,EAAE,IAAI;QAChB;;;WAGG;QACH,gBAAgB,EAAE,KAAK;QAEvB;;;WAGG;QACH,aAAa,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,GAAG,CAAC;QAEhD;;;WAGG;QACH,SAAS,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,GAAG,CAAC;QAE5C;;;WAGG;QACH,oBAAoB,EAAE,IAAI;QAE1B;;;;;WAKG;QACH,aAAa,EAAE,IAAI;QAEnB;;;WAGG;QACH,QAAQ,EAAE,IAAI;QAEd;;;WAGG;QACH,eAAe,EAAE,IAAI;KACtB,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;;WAGG;QACH,uBAAuB,CAAC,GAAY;YAClC,IAAI,CAAC,oBAAoB,GAAG,GAAG,CAAA;QACjC,CAAC;QAED;;;WAGG;QACH,gBAAgB,CAAC,CAAS;YACxB,IAAI,CAAC,aAAa,GAAG,CAAC,CAAA;QACxB,CAAC;QACD;;;WAGG;QACH,YAAY,CAAC,CAAS;YACpB,IAAI,CAAC,SAAS,GAAG,CAAC,CAAA;QACpB,CAAC;QAED;;WAEG;QACH,mBAAmB,CAAC,GAAY;YAC9B,IAAI,CAAC,gBAAgB,GAAG,GAAG,CAAA;QAC7B,CAAC;QACD;;WAEG;QACH,WAAW,CAAC,GAAY;YACtB,IAAI,CAAC,QAAQ,GAAG,GAAG,CAAA;QACrB,CAAC;QAED;;WAEG;QACH,gBAAgB,CAAC,GAAY;YAC3B,IAAI,CAAC,aAAa,GAAG,GAAG,CAAA;QAC1B,CAAC;QAED;;WAEG;QACH,kBAAkB,CAAC,GAAY;YAC7B,IAAI,CAAC,eAAe,GAAG,GAAG,CAAA;QAC5B,CAAC;QACD;;WAEG;QACH,aAAa,CAAC,GAAY;YACxB,IAAI,CAAC,UAAU,GAAG,GAAG,CAAA;QACvB,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC"}
|
package/dist/model.d.ts
CHANGED
|
@@ -1,16 +1,14 @@
|
|
|
1
1
|
import React from 'react';
|
|
2
|
-
import type { Buffer } from 'buffer';
|
|
3
|
-
import { type Instance } from 'mobx-state-tree';
|
|
4
|
-
import { type HierarchyNode } from 'd3-hierarchy';
|
|
5
|
-
import type { Theme } from '@mui/material';
|
|
6
|
-
import type { FileLocation as FileLocationType } from '@jbrowse/core/util/types';
|
|
7
|
-
export declare function isGzip(buf: Buffer): boolean;
|
|
8
|
-
import { type NodeWithIds, type NodeWithIdsAndLength } from './util';
|
|
9
2
|
import ClustalMSA from './parsers/ClustalMSA';
|
|
10
3
|
import EmfMSA from './parsers/EmfMSA';
|
|
11
|
-
import StockholmMSA from './parsers/StockholmMSA';
|
|
12
4
|
import FastaMSA from './parsers/FastaMSA';
|
|
5
|
+
import StockholmMSA from './parsers/StockholmMSA';
|
|
13
6
|
import type { InterProScanResults } from './launchInterProScan';
|
|
7
|
+
import type { NodeWithIds, NodeWithIdsAndLength } from './util';
|
|
8
|
+
import type { FileLocation as FileLocationType } from '@jbrowse/core/util/types';
|
|
9
|
+
import type { Theme } from '@mui/material';
|
|
10
|
+
import type { HierarchyNode } from 'd3-hierarchy';
|
|
11
|
+
import type { Instance } from 'mobx-state-tree';
|
|
14
12
|
export interface Accession {
|
|
15
13
|
accession: string;
|
|
16
14
|
name: string;
|
|
@@ -31,6 +29,7 @@ export interface ITextTrack {
|
|
|
31
29
|
model: TextTrackModel;
|
|
32
30
|
}
|
|
33
31
|
export type BasicTrack = ITextTrack;
|
|
32
|
+
export declare function isGzip(buf: Uint8Array): boolean;
|
|
34
33
|
/**
|
|
35
34
|
* #stateModel MsaView
|
|
36
35
|
* extends
|
|
@@ -76,10 +75,7 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
76
75
|
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
77
76
|
}>> | import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
78
77
|
locationType: import("mobx-state-tree").ISimpleType<"BlobLocation">;
|
|
79
|
-
name: import("mobx-state-tree"
|
|
80
|
-
* #property
|
|
81
|
-
* turned off tracks
|
|
82
|
-
*/).ISimpleType<string>;
|
|
78
|
+
name: import("mobx-state-tree").ISimpleType<string>;
|
|
83
79
|
blobId: import("mobx-state-tree").ISimpleType<string>;
|
|
84
80
|
}>> | import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
85
81
|
locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
|
|
@@ -98,17 +94,11 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
98
94
|
blobId: import("mobx-state-tree").ISimpleType<string>;
|
|
99
95
|
}> | import("mobx-state-tree").ModelSnapshotType<{
|
|
100
96
|
locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
|
|
101
|
-
localPath: import("mobx-state-tree"
|
|
102
|
-
* #volatile
|
|
103
|
-
* resize handle width between tree and msa area, px
|
|
104
|
-
*/).ISimpleType<string>;
|
|
97
|
+
localPath: import("mobx-state-tree").ISimpleType<string>;
|
|
105
98
|
}>, import("mobx-state-tree").ModelInstanceType<{
|
|
106
99
|
locationType: import("mobx-state-tree").ISimpleType<"BlobLocation">;
|
|
107
100
|
name: import("mobx-state-tree").ISimpleType<string>;
|
|
108
|
-
blobId: import("mobx-state-tree"
|
|
109
|
-
* #volatile
|
|
110
|
-
* the currently mouse-hovered row
|
|
111
|
-
*/).ISimpleType<string>;
|
|
101
|
+
blobId: import("mobx-state-tree").ISimpleType<string>;
|
|
112
102
|
}, {}> | import("mobx-state-tree").ModelInstanceType<{
|
|
113
103
|
locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
|
|
114
104
|
localPath: import("mobx-state-tree").ISimpleType<string>;
|
|
@@ -116,20 +106,13 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
116
106
|
locationType: "UriLocation";
|
|
117
107
|
uri: string;
|
|
118
108
|
} & Partial<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
119
|
-
locationType: import("mobx-state-tree"
|
|
120
|
-
* #volatile
|
|
121
|
-
* the currently mouse-click column
|
|
122
|
-
*/).ISimpleType<"UriLocation">;
|
|
109
|
+
locationType: import("mobx-state-tree").ISimpleType<"UriLocation">;
|
|
123
110
|
uri: import("mobx-state-tree").ISimpleType<string>;
|
|
124
111
|
baseUri: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
125
112
|
internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
126
|
-
internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree"
|
|
127
|
-
* #volatile
|
|
128
|
-
*/).IModelType<{
|
|
113
|
+
internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
|
|
129
114
|
internetAccountType: import("mobx-state-tree").ISimpleType<string>;
|
|
130
|
-
authInfo: import("mobx-state-tree"
|
|
131
|
-
* #volatile
|
|
132
|
-
*/).IType<any, any, any>;
|
|
115
|
+
authInfo: import("mobx-state-tree").IType<any, any, any>;
|
|
133
116
|
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
134
117
|
}>> & import("mobx-state-tree/dist/internal").NonEmptyObject)>, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
135
118
|
msaFilehandle: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISnapshotProcessor<import("mobx-state-tree").ITypeUnion<import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
@@ -253,6 +236,7 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
253
236
|
treeMetadata: string | undefined;
|
|
254
237
|
}>, [undefined]>;
|
|
255
238
|
featureFilters: import("mobx-state-tree").IMapType<import("mobx-state-tree").ISimpleType<boolean>>;
|
|
239
|
+
relativeTo: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
256
240
|
}, {
|
|
257
241
|
queueOfDialogs: [import("@jbrowse/core/util").DialogComponentType, any][];
|
|
258
242
|
} & {
|
|
@@ -360,10 +344,13 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
360
344
|
} | undefined;
|
|
361
345
|
/**
|
|
362
346
|
* #volatile
|
|
363
|
-
*
|
|
364
347
|
*/
|
|
365
348
|
interProAnnotations: undefined | Record<string, InterProScanResults>;
|
|
366
349
|
} & {
|
|
350
|
+
/**
|
|
351
|
+
* #action
|
|
352
|
+
*/
|
|
353
|
+
drawRelativeTo(id: string): void;
|
|
367
354
|
/**
|
|
368
355
|
* #action
|
|
369
356
|
*/
|
|
@@ -572,6 +559,10 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
572
559
|
* #getter
|
|
573
560
|
*/
|
|
574
561
|
readonly rows: [string, string][];
|
|
562
|
+
/**
|
|
563
|
+
* #getter
|
|
564
|
+
*/
|
|
565
|
+
readonly numRows: number;
|
|
575
566
|
/**
|
|
576
567
|
* #getter
|
|
577
568
|
*/
|
|
@@ -728,11 +719,11 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
728
719
|
/**
|
|
729
720
|
* #getter
|
|
730
721
|
*/
|
|
731
|
-
readonly adapterTrackModels:
|
|
722
|
+
readonly adapterTrackModels: BasicTrack[];
|
|
732
723
|
/**
|
|
733
724
|
* #getter
|
|
734
725
|
*/
|
|
735
|
-
readonly tracks:
|
|
726
|
+
readonly tracks: BasicTrack[];
|
|
736
727
|
/**
|
|
737
728
|
* #getter
|
|
738
729
|
*/
|
|
@@ -871,9 +862,12 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
871
862
|
* #action
|
|
872
863
|
*/
|
|
873
864
|
setFilter(arg: string, flag: boolean): void;
|
|
865
|
+
/**
|
|
866
|
+
* #action
|
|
867
|
+
*/
|
|
868
|
+
showEntire(): void;
|
|
874
869
|
afterCreate(): void;
|
|
875
870
|
}, import("mobx-state-tree")._NotCustomized, {
|
|
876
|
-
height: number;
|
|
877
871
|
drawLabels: boolean;
|
|
878
872
|
labelsAlignRight: boolean;
|
|
879
873
|
treeAreaWidth: number;
|
|
@@ -898,6 +892,7 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
898
892
|
colWidth: number;
|
|
899
893
|
currentAlignment: number;
|
|
900
894
|
type: "MsaView";
|
|
895
|
+
height: number;
|
|
901
896
|
treeFilehandle: {
|
|
902
897
|
locationType: "UriLocation";
|
|
903
898
|
uri: string;
|
|
@@ -951,6 +946,7 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
|
|
|
951
946
|
showOnly: string | undefined;
|
|
952
947
|
turnedOffTracks: import("mobx").IKeyValueMap<boolean>;
|
|
953
948
|
featureFilters: import("mobx").IKeyValueMap<boolean>;
|
|
949
|
+
relativeTo: string | undefined;
|
|
954
950
|
data: {
|
|
955
951
|
treeMetadata?: string | undefined;
|
|
956
952
|
msa?: string | undefined;
|