npm - react-msaview - Versions diffs - 4.0.0 → 4.0.2 - Mend

react-msaview 4.0.0 → 4.0.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (15) hide show

package/dist/colorSchemes.js CHANGED Viewed

@@ -1,5 +1,6 @@
 import { colord, extend } from 'colord';
 import namesPlugin from 'colord/plugins/names';
+import { blue, green, red, orange } from '@mui/material/colors';
 import { transform } from './util';
 extend([namesPlugin]);
 const colorSchemes = {
@@ -127,6 +128,13 @@ const colorSchemes = {
         T: '#19cc19',
         U: '#19cc19',
     },
+    jbrowse_dna: {
+        A: green[500],
+        C: blue[500],
+        G: orange[500],
+        T: red[500],
+        U: red[500],
+    },
     jalview_buried: {
         A: '#00a35c',
         R: '#00fc03',

package/dist/colorSchemes.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/index.js CHANGED Viewed

@@ -1,4 +1,3 @@
 export { default as MSAView } from './components/Loading';
 export { default as MSAModelF } from './model';
-console.log('wtf');
 //# sourceMappingURL=index.js.map

package/dist/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,OAAO,EAAE,MAAM,sBAAsB,CAAA;AACzD,OAAO,EAAE,OAAO,IAAI,SAAS,EAAqB,MAAM,SAAS,CAAA~~;AACjE,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAA~~"}
1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,OAAO,EAAE,MAAM,sBAAsB,CAAA;AACzD,OAAO,EAAE,OAAO,IAAI,SAAS,EAAqB,MAAM,SAAS,CAAA"}

package/dist/model.d.ts CHANGED Viewed

@@ -507,16 +507,6 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
      * #getter
      */
     readonly header: {};
-    /**
-     * #method
-     */
-    getRowData(name: string): {
-        data: {
-            name: string;
-            accession: string | undefined;
-            dbxref: string | undefined;
-        } | undefined;
-    };
     /**
      * #getter
      */
@@ -840,6 +830,17 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
     readonly strokePalette: {
         [k: string]: string;
     };
+    /**
+     * #method
+     */
+    getRowData(name: string): {
+        data: {
+            name: string;
+            accession: string | undefined;
+            dbxref: string | undefined;
+        } | undefined;
+        treeMetadata: any;
+    };
 } & {
     /**
      * #action

package/dist/model.js CHANGED Viewed

@@ -472,14 +472,6 @@ function stateModelFactory() {
         get header() {
             return this.MSA?.getHeader() || {};
         },
-        /**
-         * #method
-         */
-        getRowData(name) {
-            return {
-                data: this.MSA?.getRowData(name),
-            };
-        },
         /**
          * #getter
          */
@@ -1136,6 +1128,15 @@ function stateModelFactory() {
                 colord(val).darken(0.1).toHex(),
             ]));
         },
+        /**
+         * #method
+         */
+        getRowData(name) {
+            return {
+                data: self.MSA?.getRowData(name),
+                treeMetadata: self.treeMetadata[name],
+            };
+        },
     }))
         .actions(self => ({
         /**

package/dist/model.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/version.d.ts CHANGED Viewed

	@@ -1 +1 @@
1	- export declare const version = "4.0.0";
1	+ export declare const version = "4.0.2";

package/dist/version.js CHANGED Viewed

@@ -1,2 +1,2 @@
-export const version = '4.0.0';
+export const version = '4.0.2';
 //# sourceMappingURL=version.js.map

package/package.json CHANGED Viewed

@@ -1,7 +1,7 @@
 {
   "name": "react-msaview",
   "author": "Colin",
-  "version": "4.0.0",
+  "version": "4.0.2",
   "license": "MIT",
   "main": "dist/index.js",
   "module": "dist/index.js",
@@ -37,17 +37,14 @@
     "react-dom": ">=16.8.0"
   },
   "dependencies": {
-    "@eslint/js": "^9.8.0",
     "@mui/icons-material": "^6.0.2",
     "@mui/material": "^6.0.2",
-    "@types/node": "^22.1.0",
     "clustal-js": "^2.0.0",
     "colord": "^2.9.3",
     "copy-to-clipboard": "^3.3.1",
     "d3-array": "^3.2.3",
     "d3-hierarchy": "^3.1.2",
     "emf-js": "^2.0.0",
-    "eslint": "^9.8.0",
     "file-saver": "^2.0.5",
     "pako": "^2.1.0",
     "rbush": "^3.0.1",

package/src/colorSchemes.ts CHANGED Viewed

@@ -1,5 +1,6 @@
 import { colord, extend } from 'colord'
 import namesPlugin from 'colord/plugins/names'
+import { blue, green, red, grey, orange } from '@mui/material/colors'
 import { transform } from './util'
 extend([namesPlugin])
@@ -133,6 +134,13 @@ const colorSchemes = {
     T: '#19cc19',
     U: '#19cc19',
   },
+  jbrowse_dna: {
+    A: green[500],
+    C: blue[500],
+    G: orange[500],
+    T: red[500],
+    U: red[500],
+  },
   jalview_buried: {
     A: '#00a35c',
     R: '#00fc03',

package/src/index.ts CHANGED Viewed

@@ -1,3 +1,2 @@
 export { default as MSAView } from './components/Loading'
 export { default as MSAModelF, type MsaViewModel } from './model'
-console.log('wtf')

package/src/model.ts CHANGED Viewed

@@ -573,15 +573,6 @@ function stateModelFactory() {
         return this.MSA?.getHeader() || {}
       },
-      /**
-       * #method
-       */
-      getRowData(name: string) {
-        return {
-          data: this.MSA?.getRowData(name),
-        }
-      },
       /**
        * #getter
        */
@@ -1282,6 +1273,16 @@ function stateModelFactory() {
           ]),
         )
       },
+      /**
+       * #method
+       */
+      getRowData(name: string) {
+        return {
+          data: self.MSA?.getRowData(name),
+          treeMetadata: self.treeMetadata[name],
+        }
+      },
     }))
     .actions(self => ({
       /**

package/src/version.ts CHANGED Viewed

	@@ -1 +1 @@
1	- export const version = '4.0.0'
1	+ export const version = '4.0.2'