react-msaview 3.2.2 → 4.0.1

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Files changed (12) hide show
  1. package/bundle/index.js +62 -76
  2. package/dist/components/tree/TreeNodeMenu.js +4 -3
  3. package/dist/components/tree/TreeNodeMenu.js.map +1 -1
  4. package/dist/model.d.ts +11 -10
  5. package/dist/model.js +9 -8
  6. package/dist/model.js.map +1 -1
  7. package/dist/version.d.ts +1 -1
  8. package/dist/version.js +1 -1
  9. package/package.json +3 -6
  10. package/src/components/tree/TreeNodeMenu.tsx +10 -4
  11. package/src/model.ts +10 -9
  12. package/src/version.ts +1 -1
package/dist/components/tree/TreeNodeMenu.js CHANGED
@@ -5,18 +5,19 @@ import { observer } from 'mobx-react';
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  const TreeNodeInfoDialog = lazy(() => import('./dialogs/TreeNodeInfoDialog'));
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  const TreeMenu = observer(function ({ node, onClose, model, }) {
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  const { collapsed, collapsedLeaves } = model;
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+ const { name } = node;
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  return (React.createElement(Menu, { anchorReference: "anchorPosition", anchorPosition: {
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  top: node.y,
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  left: node.x,
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  }, transitionDuration: 0, keepMounted: true, open: Boolean(node), onClose: onClose },
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- React.createElement(MenuItem, { dense: true, disabled: true }, node.name),
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+ React.createElement(MenuItem, { dense: true, disabled: true }, name),
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  React.createElement(MenuItem, { dense: true, onClick: () => {
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  model.queueDialog(onClose => [
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  TreeNodeInfoDialog,
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  {
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- info: model.getRowData(node.name),
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+ info: model.getRowData(name),
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  model,
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- nodeName: node.name,
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+ nodeName: name,
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  onClose,
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  },
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  ]);
package/dist/components/tree/TreeNodeMenu.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"TreeNodeMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeNodeMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACnC,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AAC9C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAKrC,SAAS;AACT,MAAM,kBAAkB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,8BAA8B,CAAC,CAAC,CAAA;AAE7E,MAAM,QAAQ,GAAG,QAAQ,CAAC,UAAU,EAClC,IAAI,EACJ,OAAO,EACP,KAAK,GAKN;IACC,MAAM,EAAE,SAAS,EAAE,eAAe,EAAE,GAAG,KAAK,CAAA;IAC5C,OAAO,CACL,oBAAC,IAAI,IACH,eAAe,EAAC,gBAAgB,EAChC,cAAc,EAAE;YACd,GAAG,EAAE,IAAI,CAAC,CAAC;YACX,IAAI,EAAE,IAAI,CAAC,CAAC;SACb,EACD,kBAAkB,EAAE,CAAC,EACrB,WAAW,QACX,IAAI,EAAE,OAAO,CAAC,IAAI,CAAC,EACnB,OAAO,EAAE,OAAO;QAEhB,oBAAC,QAAQ,IAAC,KAAK,QAAC,QAAQ,UACrB,IAAI,CAAC,IAAI,CACD;QAEX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;oBAC3B,kBAAkB;oBAClB;wBACE,IAAI,EAAE,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC;wBACjC,KAAK;wBACL,QAAQ,EAAE,IAAI,CAAC,IAAI;wBACnB,OAAO;qBACR;iBACF,CAAC,CAAA;gBACF,OAAO,EAAE,CAAA;YACX,CAAC,mBAGQ;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;oBAChC,KAAK,CAAC,eAAe,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAChC,CAAC;qBAAM,CAAC;oBACN,IAAI,IAAI,CAAC,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC,EAAE,CAAC;wBAClC,KAAK,CAAC,gBAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;oBACjC,CAAC;yBAAM,CAAC;wBACN,KAAK,CAAC,gBAAgB,CAAC,GAAG,IAAI,CAAC,EAAE,WAAW,CAAC,CAAA;oBAC/C,CAAC;gBACH,CAAC;gBACD,OAAO,EAAE,CAAA;YACX,CAAC,IAEA,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,eAAe,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;YAC/D,CAAC,CAAC,WAAW;YACb,CAAC,CAAC,WAAW,CACN,CACN,CACR,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,QAAQ,CAAA"}
1
+ {"version":3,"file":"TreeNodeMenu.js","sourceRoot":"","sources":["../../../src/components/tree/TreeNodeMenu.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACnC,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AAC9C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAKrC,SAAS;AACT,MAAM,kBAAkB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,8BAA8B,CAAC,CAAC,CAAA;AAE7E,MAAM,QAAQ,GAAG,QAAQ,CAAC,UAAU,EAClC,IAAI,EACJ,OAAO,EACP,KAAK,GAUN;IACC,MAAM,EAAE,SAAS,EAAE,eAAe,EAAE,GAAG,KAAK,CAAA;IAC5C,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAA;IACrB,OAAO,CACL,oBAAC,IAAI,IACH,eAAe,EAAC,gBAAgB,EAChC,cAAc,EAAE;YACd,GAAG,EAAE,IAAI,CAAC,CAAC;YACX,IAAI,EAAE,IAAI,CAAC,CAAC;SACb,EACD,kBAAkB,EAAE,CAAC,EACrB,WAAW,QACX,IAAI,EAAE,OAAO,CAAC,IAAI,CAAC,EACnB,OAAO,EAAE,OAAO;QAEhB,oBAAC,QAAQ,IAAC,KAAK,QAAC,QAAQ,UACrB,IAAI,CACI;QAEX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;oBAC3B,kBAAkB;oBAClB;wBACE,IAAI,EAAE,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC;wBAC5B,KAAK;wBACL,QAAQ,EAAE,IAAI;wBACd,OAAO;qBACR;iBACF,CAAC,CAAA;gBACF,OAAO,EAAE,CAAA;YACX,CAAC,mBAGQ;QACX,oBAAC,QAAQ,IACP,KAAK,QACL,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;oBAChC,KAAK,CAAC,eAAe,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;gBAChC,CAAC;qBAAM,CAAC;oBACN,IAAI,IAAI,CAAC,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC,EAAE,CAAC;wBAClC,KAAK,CAAC,gBAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;oBACjC,CAAC;yBAAM,CAAC;wBACN,KAAK,CAAC,gBAAgB,CAAC,GAAG,IAAI,CAAC,EAAE,WAAW,CAAC,CAAA;oBAC/C,CAAC;gBACH,CAAC;gBACD,OAAO,EAAE,CAAA;YACX,CAAC,IAEA,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,eAAe,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;YAC/D,CAAC,CAAC,WAAW;YACb,CAAC,CAAC,WAAW,CACN,CACN,CACR,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,QAAQ,CAAA"}
package/dist/model.d.ts CHANGED
@@ -507,16 +507,6 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
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  * #getter
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  */
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  readonly header: {};
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- /**
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- * #method
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- */
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- getRowData(name: string): {
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- data: {
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- name: string;
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- accession: string | undefined;
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- dbxref: string | undefined;
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- } | undefined;
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- };
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  /**
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  * #getter
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  */
@@ -840,6 +830,17 @@ declare function stateModelFactory(): import("mobx-state-tree").IModelType<{
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  readonly strokePalette: {
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  [k: string]: string;
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  };
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+ /**
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+ * #method
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+ */
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+ getRowData(name: string): {
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+ data: {
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+ name: string;
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+ accession: string | undefined;
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+ dbxref: string | undefined;
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+ } | undefined;
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+ treeMetadata: any;
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+ };
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  } & {
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  /**
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  * #action
package/dist/model.js CHANGED
@@ -472,14 +472,6 @@ function stateModelFactory() {
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  get header() {
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  return this.MSA?.getHeader() || {};
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  },
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- /**
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- * #method
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- */
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- getRowData(name) {
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- return {
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- data: this.MSA?.getRowData(name),
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- };
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- },
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  /**
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  * #getter
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477
  */
@@ -1136,6 +1128,15 @@ function stateModelFactory() {
1136
1128
  colord(val).darken(0.1).toHex(),
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1129
  ]));
1138
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  },
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+ /**
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+ * #method
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+ */
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+ getRowData(name) {
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+ return {
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+ data: self.MSA?.getRowData(name),
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+ treeMetadata: self.treeMetadata[name],
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+ };
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+ },
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  }))
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  .actions(self => ({
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  /**
package/dist/model.js.map CHANGED
@@ -1 +1 @@
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package/dist/version.d.ts CHANGED
@@ -1 +1 @@
1
- export declare const version = "3.2.2";
1
+ export declare const version = "4.0.1";
package/dist/version.js CHANGED
@@ -1,2 +1,2 @@
1
- export const version = '3.2.2';
1
+ export const version = '4.0.1';
2
2
  //# sourceMappingURL=version.js.map
package/package.json CHANGED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "name": "react-msaview",
3
3
  "author": "Colin",
4
- "version": "3.2.2",
4
+ "version": "4.0.1",
5
5
  "license": "MIT",
6
6
  "main": "dist/index.js",
7
7
  "module": "dist/index.js",
@@ -37,17 +37,14 @@
37
37
  "react-dom": ">=16.8.0"
38
38
  },
39
39
  "dependencies": {
40
- "@eslint/js": "^9.8.0",
41
- "@mui/icons-material": "^5.0.0",
42
- "@mui/material": "^5.0.0",
43
- "@types/node": "^22.1.0",
40
+ "@mui/icons-material": "^6.0.2",
41
+ "@mui/material": "^6.0.2",
44
42
  "clustal-js": "^2.0.0",
45
43
  "colord": "^2.9.3",
46
44
  "copy-to-clipboard": "^3.3.1",
47
45
  "d3-array": "^3.2.3",
48
46
  "d3-hierarchy": "^3.1.2",
49
47
  "emf-js": "^2.0.0",
50
- "eslint": "^9.8.0",
51
48
  "file-saver": "^2.0.5",
52
49
  "pako": "^2.1.0",
53
50
  "rbush": "^3.0.1",
package/src/components/tree/TreeNodeMenu.tsx CHANGED
@@ -13,11 +13,17 @@ const TreeMenu = observer(function ({
13
13
  onClose,
14
14
  model,
15
15
  }: {
16
- node: { x: number; y: number; name: string; id: string }
16
+ node: {
17
+ x: number
18
+ y: number
19
+ name: string
20
+ id: string
21
+ }
17
22
  model: MsaViewModel
18
23
  onClose: () => void
19
24
  }) {
20
25
  const { collapsed, collapsedLeaves } = model
26
+ const { name } = node
21
27
  return (
22
28
  <Menu
23
29
  anchorReference="anchorPosition"
@@ -31,7 +37,7 @@ const TreeMenu = observer(function ({
31
37
  onClose={onClose}
32
38
  >
33
39
  <MenuItem dense disabled>
34
- {node.name}
40
+ {name}
35
41
  </MenuItem>
36
42
 
37
43
  <MenuItem
@@ -40,9 +46,9 @@ const TreeMenu = observer(function ({
40
46
  model.queueDialog(onClose => [
41
47
  TreeNodeInfoDialog,
42
48
  {
43
- info: model.getRowData(node.name),
49
+ info: model.getRowData(name),
44
50
  model,
45
- nodeName: node.name,
51
+ nodeName: name,
46
52
  onClose,
47
53
  },
48
54
  ])
package/src/model.ts CHANGED
@@ -573,15 +573,6 @@ function stateModelFactory() {
573
573
  return this.MSA?.getHeader() || {}
574
574
  },
575
575
 
576
- /**
577
- * #method
578
- */
579
- getRowData(name: string) {
580
- return {
581
- data: this.MSA?.getRowData(name),
582
- }
583
- },
584
-
585
576
  /**
586
577
  * #getter
587
578
  */
@@ -1282,6 +1273,16 @@ function stateModelFactory() {
1282
1273
  ]),
1283
1274
  )
1284
1275
  },
1276
+
1277
+ /**
1278
+ * #method
1279
+ */
1280
+ getRowData(name: string) {
1281
+ return {
1282
+ data: self.MSA?.getRowData(name),
1283
+ treeMetadata: self.treeMetadata[name],
1284
+ }
1285
+ },
1285
1286
  }))
1286
1287
  .actions(self => ({
1287
1288
  /**
package/src/version.ts CHANGED
@@ -1 +1 @@
1
- export const version = '3.2.2'
1
+ export const version = '4.0.1'