react-msaview 3.1.5 → 3.1.6

package/dist/components/dialogs/SettingsDialog.js.map

@@ -1 +1 @@
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+{"version":3,"file":"SettingsDialog.js","sourceRoot":"","sources":["../../../src/components/dialogs/SettingsDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EACL,MAAM,EACN,QAAQ,EACR,aAAa,EACb,aAAa,EACb,gBAAgB,EAEhB,QAAQ,EACR,MAAM,EACN,SAAS,EACT,UAAU,GACX,MAAM,eAAe,CAAA;AAGtB,OAAO,YAAY,MAAM,oBAAoB,CAAA;AAE7C,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,KAAK,EAAE;QACL,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,IAAI,EAAE;QACJ,OAAO,EAAE,MAAM;KAChB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,iBAAiB,CAAC,IAA2B;IACpD,OAAO,CACL;QACE,oBAAC,gBAAgB,OAAK,IAAI,GAAI,CAC1B,CACP,CAAA;AACH,CAAC;AAED,SAAS,SAAS,CAAC,EACjB,OAAO,EACP,KAAK,EACL,QAAQ,GAKT;IACC,OAAO,CACL,oBAAC,iBAAiB,IAChB,OAAO,EAAE,oBAAC,QAAQ,IAAC,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,QAAQ,GAAI,EAC3D,KAAK,EAAE,KAAK,GACZ,CACH,CAAA;AACH,CAAC;AAED,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAC3E,OAAO,CACL;QACE,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI;QAC9B,oBAAC,WAAW,IAAC,KAAK,EAAE,KAAK,GAAI,CAC5B,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,SAAS,YAAY,CAAC,EAAE,KAAK,EAA2B;IACtD,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EACJ,QAAQ,EACR,eAAe,EACf,gBAAgB,EAChB,MAAM,EACN,aAAa,EACb,oBAAoB,EACpB,SAAS,GACV,GAAG,KAAK,CAAA;IAET,OAAO,CACL;QACE,+CAAqB;QACrB,oBAAC,SAAS,IACR,OAAO,EAAE,aAAa,EACtB,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,gBAAgB,CAAC,CAAC,aAAa,CAAC,EACtD,KAAK,EAAC,qBAAqB,GAC3B;QAEF,oBAAC,SAAS,IACR,OAAO,EAAE,eAAe,EACxB,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC,eAAe,CAAC,EAC1D,KAAK,EAAC,0CAA0C,GAChD;QACF,oBAAC,SAAS,IACR,OAAO,EAAE,QAAQ,EACjB,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC,QAAQ,CAAC,EAC5C,KAAK,EAAC,YAAY,GAClB;QAEF,oBAAC,SAAS,IACR,OAAO,EAAE,gBAAgB,EACzB,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,mBAAmB,CAAC,CAAC,gBAAgB,CAAC,EAC5D,KAAK,EAAC,0BAA0B,GAChC;QACD,CAAC,MAAM,CAAC,CAAC,CAAC,CACT;YACE,oBAAC,SAAS,IACR,OAAO,EAAE,oBAAoB,EAC7B,QAAQ,EAAE,GAAG,EAAE,CACb,KAAK,CAAC,uBAAuB,CAAC,CAAC,oBAAoB,CAAC,EAEtD,KAAK,EAAC,mCAAmC,GACzC;YACD,CAAC,oBAAoB,CAAC,CAAC,CAAC,CACvB,6BAAK,SAAS,EAAE,OAAO,CAAC,IAAI;gBAC1B,oBAAC,UAAU;;oBAAc,SAAS;0BAAiB;gBACnD,oBAAC,MAAM,IACL,SAAS,EAAE,OAAO,CAAC,KAAK,EACxB,GAAG,EAAE,EAAE,EACP,GAAG,EAAE,GAAG,EACR,KAAK,EAAE,SAAS,EAChB,QAAQ,EAAE,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,CAAC,KAAK,CAAC,YAAY,CAAC,GAAa,CAAC,GACvD,CACE,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC;AAED,SAAS,WAAW,CAAC,EAAE,KAAK,EAA2B;IACrD,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,eAAe,EAAE,SAAS,EAAE,GAAG,KAAK,CAAA;IAE/D,OAAO,CACL;QACE,8CAAoB;QAEpB,oBAAC,SAAS,IACR,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC,OAAO,CAAC,EAC1C,KAAK,EAAC,gCAAgC,GACtC;QAEF,6BAAK,SAAS,EAAE,OAAO,CAAC,IAAI;YAC1B,oBAAC,UAAU;;gBAAgB,QAAQ;sBAAiB;YACpD,oBAAC,MAAM,IACL,SAAS,EAAE,OAAO,CAAC,KAAK,EACxB,GAAG,EAAE,CAAC,EACN,GAAG,EAAE,EAAE,EACP,KAAK,EAAE,QAAQ,EACf,QAAQ,EAAE,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,CAAC,KAAK,CAAC,WAAW,CAAC,GAAa,CAAC,GACtD,CACE;QACN,6BAAK,SAAS,EAAE,OAAO,CAAC,IAAI;YAC1B,oBAAC,UAAU;;gBAAc,SAAS;sBAAiB;YACnD,oBAAC,MAAM,IACL,SAAS,EAAE,OAAO,CAAC,KAAK,EACxB,GAAG,EAAE,CAAC,EACN,GAAG,EAAE,EAAE,EACP,KAAK,EAAE,SAAS,EAChB,QAAQ,EAAE,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,CAAC,KAAK,CAAC,YAAY,CAAC,GAAa,CAAC,GACvD,CACE;QAEN,oBAAC,SAAS,IACR,MAAM,QACN,KAAK,EAAC,cAAc,EACpB,KAAK,EAAE,eAAe,EACtB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,kBAAkB,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,IAE9D,MAAM,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CACvC,oBAAC,QAAQ,IAAC,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,IACjC,MAAM,CACE,CACZ,CAAC,CACQ,CACR,CACP,CAAA;AACH,CAAC;AAED,MAAM,cAAc,GAAG,QAAQ,CAAC,UAAU,EACxC,KAAK,EACL,OAAO,GAIR;IACC,OAAO,CACL,oBAAC,MAAM,IAAC,IAAI,QAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,EAAE,EAAE,KAAK,EAAC,UAAU;QACrD,oBAAC,aAAa;YACZ,oBAAC,eAAe,IAAC,KAAK,EAAE,KAAK,GAAI;YACjC,oBAAC,aAAa;gBACZ,oBAAC,MAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,EAAE,EAAE,OAAO,EAAC,WAAW,EAAC,KAAK,EAAC,SAAS,aAE5D,CACK,CACF,CACT,CACV,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,cAAc,CAAA"}

package/dist/measureTextCanvas.d.ts

@@ -1 +1 @@
-export default function measureTextCanvas(text: string, fontSize: number): number;
+export declare function measureTextCanvas(text: string, fontSize: number): number;

package/dist/measureTextCanvas.js

@@ -1,5 +1,5 @@
 let canvasHandle;
-export default function measureTextCanvas(text, fontSize) {
+export function measureTextCanvas(text, fontSize) {
     if (!canvasHandle) {
         canvasHandle = document.createElement('canvas');
     }

package/dist/measureTextCanvas.js.map

@@ -1 +1 @@
-{"version":3,"file":"measureTextCanvas.js","sourceRoot":"","sources":["../src/measureTextCanvas.ts"],"names":[],"mappings":"AAAA,IAAI,YAA2C,CAAA;AAE/C,MAAM,CAAC,OAAO,UAAU,iBAAiB,CAAC,IAAY,EAAE,QAAgB;IACtE,IAAI,CAAC,YAAY,EAAE,CAAC;QAClB,YAAY,GAAG,QAAQ,CAAC,aAAa,CAAC,QAAQ,CAAC,CAAA;IACjD,CAAC;IAED,MAAM,GAAG,GAAG,YAAY,CAAC,UAAU,CAAC,IAAI,CAAC,CAAA;IACzC,IAAI,CAAC,GAAG,EAAE,CAAC;QACT,MAAM,IAAI,KAAK,CAAC,mBAAmB,CAAC,CAAA;IACtC,CAAC;IACD,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO,EAAE,GAAG,QAAQ,IAAI,CAAC,CAAA;IACrD,OAAO,GAAG,CAAC,WAAW,CAAC,IAAI,CAAC,CAAC,KAAK,CAAA;AACpC,CAAC"}
+{"version":3,"file":"measureTextCanvas.js","sourceRoot":"","sources":["../src/measureTextCanvas.ts"],"names":[],"mappings":"AAAA,IAAI,YAA2C,CAAA;AAE/C,MAAM,UAAU,iBAAiB,CAAC,IAAY,EAAE,QAAgB;IAC9D,IAAI,CAAC,YAAY,EAAE,CAAC;QAClB,YAAY,GAAG,QAAQ,CAAC,aAAa,CAAC,QAAQ,CAAC,CAAA;IACjD,CAAC;IAED,MAAM,GAAG,GAAG,YAAY,CAAC,UAAU,CAAC,IAAI,CAAC,CAAA;IACzC,IAAI,CAAC,GAAG,EAAE,CAAC;QACT,MAAM,IAAI,KAAK,CAAC,mBAAmB,CAAC,CAAA;IACtC,CAAC;IACD,GAAG,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO,EAAE,GAAG,QAAQ,IAAI,CAAC,CAAA;IACrD,OAAO,GAAG,CAAC,WAAW,CAAC,IAAI,CAAC,CAAC,KAAK,CAAA;AACpC,CAAC"}

package/dist/model.d.ts

@@ -1,13 +1,12 @@
 import React from 'react';
-import { Instance, SnapshotIn } from 'mobx-state-tree';
+import { Instance } from 'mobx-state-tree';
 import { HierarchyNode } from 'd3-hierarchy';
+import { Theme } from '@mui/material';
 import { FileLocation as FileLocationType } from '@jbrowse/core/util/types';
 import { NodeWithIds, NodeWithIdsAndLength } from './util';
 import ClustalMSA from './parsers/ClustalMSA';
 import StockholmMSA from './parsers/StockholmMSA';
 import FastaMSA from './parsers/FastaMSA';
-import { StructureModel } from './StructureModel';
-import { Theme } from '@mui/material';
 export interface RowDetails {
     [key: string]: unknown;
     name: string;
@@ -46,22 +45,12 @@ export interface IBoxTrack {
     model: BoxTrackModel;
 }
 export type BasicTrack = IBoxTrack | ITextTrack;
-export type StructureSnap = SnapshotIn<typeof StructureModel>;
 export type DialogComponentType = React.LazyExoticComponent<React.FC<any>> | React.FC<any>;
 declare const model: import("mobx-state-tree").IModelType<{
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
     minimized: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
 } & {
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    type: import("mobx-state-tree").ISimpleType<"MsaView">;
-    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
-    treeAreaWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
-    treeWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
-    treeWidthMatchesArea: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
-    rowHeight: import("mobx-state-tree").IType<number | undefined, number, number>;
-    scrollY: import("mobx-state-tree").IType<number | undefined, number, number>;
-    scrollX: import("mobx-state-tree").IType<number | undefined, number, number>;
     selectedStructures: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         id: import("mobx-state-tree").ISimpleType<string>;
         structure: import("mobx-state-tree").IModelType<{
@@ -71,6 +60,16 @@ declare const model: import("mobx-state-tree").IModelType<{
         }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
         range: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
     }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+} & {
+    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+    type: import("mobx-state-tree").ISimpleType<"MsaView">;
+    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
+    treeAreaWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
+    treeWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
+    treeWidthMatchesArea: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    rowHeight: import("mobx-state-tree").IType<number | undefined, number, number>;
+    scrollY: import("mobx-state-tree").IType<number | undefined, number, number>;
+    scrollX: import("mobx-state-tree").IType<number | undefined, number, number>;
     labelsAlignRight: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
     colWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
     showBranchLen: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
@@ -81,16 +80,16 @@ declare const model: import("mobx-state-tree").IModelType<{
     colorSchemeName: import("mobx-state-tree").IType<string | undefined, string, string>;
     treeFilehandle: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISnapshotProcessor<import("mobx-state-tree").ITypeUnion<import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"UriLocation">;
-        uri: import("mobx-state-tree").ISimpleType<string>; /**
-         * #property
-         * draw clickable node bubbles on the tree
-         */
+        uri: import("mobx-state-tree").ISimpleType<string>;
         baseUri: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
-        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>; /**
+         * #property
+         * filehandle object for the tree
+         */
     }>> | import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"BlobLocation">;
         name: import("mobx-state-tree").ISimpleType<string>;
@@ -103,11 +102,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -122,7 +117,10 @@ declare const model: import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         blobId: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | import("mobx-state-tree").ModelInstanceType<{
-        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
+        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">; /**
+         * #volatile
+         * the currently mouse-hovered column
+         */
         localPath: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | ({
         locationType: "UriLocation";
@@ -134,21 +132,24 @@ declare const model: import("mobx-state-tree").IModelType<{
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
+            /**
+             * #volatile
+             */
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     }>> & import("mobx-state-tree/dist/internal").NonEmptyObject)>, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     msaFilehandle: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISnapshotProcessor<import("mobx-state-tree").ITypeUnion<import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"UriLocation">;
-        uri: import("mobx-state-tree").ISimpleType<string>; /**
-         * #property
-         * draw clickable node bubbles on the tree
-         */
+        uri: import("mobx-state-tree").ISimpleType<string>;
         baseUri: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
-        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>; /**
+         * #property
+         * filehandle object for the tree
+         */
     }>> | import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"BlobLocation">;
         name: import("mobx-state-tree").ISimpleType<string>;
@@ -161,11 +162,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -180,7 +177,10 @@ declare const model: import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         blobId: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | import("mobx-state-tree").ModelInstanceType<{
-        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
+        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">; /**
+         * #volatile
+         * the currently mouse-hovered column
+         */
         localPath: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | ({
         locationType: "UriLocation";
@@ -192,21 +192,24 @@ declare const model: import("mobx-state-tree").IModelType<{
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
+            /**
+             * #volatile
+             */
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     }>> & import("mobx-state-tree/dist/internal").NonEmptyObject)>, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     treeMetadataFilehandle: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISnapshotProcessor<import("mobx-state-tree").ITypeUnion<import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"UriLocation">;
-        uri: import("mobx-state-tree").ISimpleType<string>; /**
-         * #property
-         * draw clickable node bubbles on the tree
-         */
+        uri: import("mobx-state-tree").ISimpleType<string>;
         baseUri: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
-        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>; /**
+         * #property
+         * filehandle object for the tree
+         */
     }>> | import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
         locationType: import("mobx-state-tree").ISimpleType<"BlobLocation">;
         name: import("mobx-state-tree").ISimpleType<string>;
@@ -219,11 +222,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -238,7 +237,10 @@ declare const model: import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         blobId: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | import("mobx-state-tree").ModelInstanceType<{
-        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">;
+        locationType: import("mobx-state-tree").ISimpleType<"LocalPathLocation">; /**
+         * #volatile
+         * the currently mouse-hovered column
+         */
         localPath: import("mobx-state-tree").ISimpleType<string>;
     }, {}> | ({
         locationType: "UriLocation";
@@ -250,12 +252,15 @@ declare const model: import("mobx-state-tree").IModelType<{
         internetAccountId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         internetAccountPreAuthorization: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
             internetAccountType: import("mobx-state-tree").ISimpleType<string>;
+            /**
+             * #volatile
+             */
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     }>> & import("mobx-state-tree/dist/internal").NonEmptyObject)>, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     currentAlignment: import("mobx-state-tree").IType<number | undefined, number, number>;
     collapsed: import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<string>>;
-    hidden: import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<string>>;
+    collapsed2: import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<string>>;
     showOnly: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
     boxTracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         id: import("mobx-state-tree").ISimpleType<string>;
@@ -290,9 +295,9 @@ declare const model: import("mobx-state-tree").IModelType<{
         msa: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         treeMetadata: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
     }, {
-        setTree(tree?: string): void;
-        setMSA(msa?: string): void;
-        setTreeMetadata(treeMetadata?: string): void;
+        setTree(tree?: string | undefined): void;
+        setMSA(msa?: string | undefined): void;
+        setTreeMetadata(treeMetadata?: string | undefined): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
 }, {
     width: number;
@@ -310,6 +315,34 @@ declare const model: import("mobx-state-tree").IModelType<{
 } & {
     removeActiveDialog(): void;
     queueDialog(cb: (doneCallback: () => void) => [import("@jbrowse/core/util").DialogComponentType, unknown]): void;
+} & {
+    addStructureToSelection(elt: import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
+        id: import("mobx-state-tree").ISimpleType<string>;
+        structure: import("mobx-state-tree").IModelType<{
+            pdb: import("mobx-state-tree").ISimpleType<string>;
+            startPos: import("mobx-state-tree").ISimpleType<number>;
+            endPos: import("mobx-state-tree").ISimpleType<number>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+        range: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
+    }>>): void;
+    removeStructureFromSelection(elt: import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
+        id: import("mobx-state-tree").ISimpleType<string>;
+        structure: import("mobx-state-tree").IModelType<{
+            pdb: import("mobx-state-tree").ISimpleType<string>;
+            startPos: import("mobx-state-tree").ISimpleType<number>;
+            endPos: import("mobx-state-tree").ISimpleType<number>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+        range: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
+    }>>): void;
+    toggleStructureSelection(elt: {
+        id: string;
+        structure: {
+            startPos: number;
+            endPos: number;
+            pdb: string;
+        };
+    }): void;
+    clearSelectedStructures(): void;
 } & {
     /**
      * #volatile
@@ -331,6 +364,16 @@ declare const model: import("mobx-state-tree").IModelType<{
      * the currently mouse-hovered column
      */
     mouseCol: number | undefined;
+    /**
+     * #volatile
+     * the currently mouse-click row
+     */
+    mouseClickRow: number | undefined;
+    /**
+     * #volatile
+     * the currently mouse-click column
+     */
+    mouseClickCol: number | undefined;
     /**
      * #volatile
      * a dummy variable that is incremented when ref changes so autorun for
@@ -362,33 +405,6 @@ declare const model: import("mobx-state-tree").IModelType<{
      * set the height of the view in px
      */
     setHeight(height: number): void;
-    /**
-     * #action
-     * add to the selected structures
-     */
-    addStructureToSelection(elt: StructureSnap): void;
-    /**
-     * #action
-     * remove from the selected structures
-     */
-    removeStructureFromSelection(elt: StructureSnap): void;
-    /**
-     * #action
-     * toggle a structure from the selected structures list
-     */
-    toggleStructureSelection(elt: {
-        id: string;
-        structure: {
-            startPos: number;
-            endPos: number;
-            pdb: string;
-        };
-    }): void;
-    /**
-     * #action
-     * clear all selected structures
-     */
-    clearSelectedStructures(): void;
     /**
      * #action
      * set error state
@@ -399,6 +415,11 @@ declare const model: import("mobx-state-tree").IModelType<{
      * set mouse position (row, column) in the MSA
      */
     setMousePos(col?: number, row?: number): void;
+    /**
+     * #action
+     * set mouse click position (row, column) in the MSA
+     */
+    setMouseClickPos(col?: number, row?: number): void;
     /**
      * #action
      * set row height (px)
@@ -450,15 +471,11 @@ declare const model: import("mobx-state-tree").IModelType<{
     /**
      * #action
      */
-    hideNode(arg: string): void;
+    toggleCollapsed(node: string): void;
     /**
      * #action
      */
-    clearHidden(): void;
-    /**
-     * #action
-     */
-    toggleCollapsed(node: string): void;
+    toggleCollapsed2(node: string): void;
     /**
      * #action
      */
@@ -769,6 +786,15 @@ declare const model: import("mobx-state-tree").IModelType<{
     afterCreate(): void;
 }, import("mobx-state-tree")._NotCustomized, {
     id: string;
+    selectedStructures: import("mobx-state-tree").ModelSnapshotType<{
+        id: import("mobx-state-tree").ISimpleType<string>;
+        structure: import("mobx-state-tree").IModelType<{
+            pdb: import("mobx-state-tree").ISimpleType<string>;
+            startPos: import("mobx-state-tree").ISimpleType<number>;
+            endPos: import("mobx-state-tree").ISimpleType<number>;
+        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+        range: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
+    }>[];
     type: "MsaView";
     height: number;
     treeWidthMatchesArea: boolean;
@@ -786,25 +812,12 @@ declare const model: import("mobx-state-tree").IModelType<{
     currentAlignment: number;
     treeAreaWidth: number;
     treeWidth: number;
-    selectedStructures: import("mobx-state-tree").ModelSnapshotType<{
-        id: import("mobx-state-tree").ISimpleType<string>;
-        structure: import("mobx-state-tree").IModelType<{
-            pdb: import("mobx-state-tree").ISimpleType<string>;
-            startPos: import("mobx-state-tree").ISimpleType<number>;
-            endPos: import("mobx-state-tree").ISimpleType<number>;
-        }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
-        range: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    }>[];
     treeFilehandle: {
         locationType: "UriLocation";
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -820,11 +833,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -840,11 +849,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         uri: string;
         internetAccountId: string | undefined;
         internetAccountPreAuthorization: import("mobx-state-tree").ModelSnapshotType<{
-            internetAccountType: import("mobx-state-tree").ISimpleType<string>; /**
-             * #property
-             * a list of "tracks" to display, as box-like glyphs (e.g. protein
-             * domains)
-             */
+            internetAccountType: import("mobx-state-tree").ISimpleType<string>;
             authInfo: import("mobx-state-tree").IType<any, any, any>;
         }> | undefined;
     } | import("mobx-state-tree").ModelSnapshotType<{
@@ -856,7 +861,7 @@ declare const model: import("mobx-state-tree").IModelType<{
         localPath: import("mobx-state-tree").ISimpleType<string>;
     }> | undefined;
     collapsed: string[];
-    hidden: string[];
+    collapsed2: string[];
     showOnly: string | undefined;
     boxTracks: import("mobx-state-tree").ModelSnapshotType<{
         id: import("mobx-state-tree").ISimpleType<string>;