react-msaview 3.1.10 → 3.1.12

package/dist/components/Loading.js

@@ -14,7 +14,7 @@ function Reset({ model, error }) {
 const Loading = observer(function ({ model }) {
     const { isLoading, initialized } = model;
     return (React.createElement("div", null,
-        React.createElement(ErrorBoundary, { fallbackRender: props => React.createElement(Reset, { model: model, error: props.error }) }, !initialized ? (React.createElement(ImportForm, { model: model })) : isLoading ? (React.createElement(Typography, { variant: "h4" }, "Loading...")) : (React.createElement(MSAView, { model: model })))));
+        React.createElement(ErrorBoundary, { fallbackRender: props => React.createElement(Reset, { model: model, error: props.error }) }, initialized ? (isLoading ? (React.createElement(Typography, { variant: "h4" }, "Loading...")) : (React.createElement(MSAView, { model: model }))) : (React.createElement(ImportForm, { model: model })))));
 });
 export default Loading;
 //# sourceMappingURL=Loading.js.map

package/dist/components/Loading.js.map

@@ -1 +1 @@
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+{"version":3,"file":"Loading.js","sourceRoot":"","sources":["../../src/components/Loading.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAClD,OAAO,EAAE,aAAa,EAAE,MAAM,sBAAsB,CAAA;AACpD,OAAO,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAA;AAE/C,SAAS;AACT,OAAO,UAAU,MAAM,qBAAqB,CAAA;AAC5C,OAAO,OAAO,MAAM,WAAW,CAAA;AAG/B,SAAS,KAAK,CAAC,EAAE,KAAK,EAAE,KAAK,EAA2C;IACtE,OAAO,CACL;QACE,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI;QAC9B,oBAAC,MAAM,IAAC,OAAO,EAAC,WAAW,EAAC,KAAK,EAAC,SAAS,EAAC,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,KAAK,EAAE,4BAE/D,CACL,CACP,CAAA;AACH,CAAC;AAED,MAAM,OAAO,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACnE,MAAM,EAAE,SAAS,EAAE,WAAW,EAAE,GAAG,KAAK,CAAA;IAExC,OAAO,CACL;QACE,oBAAC,aAAa,IACZ,cAAc,EAAE,KAAK,CAAC,EAAE,CAAC,oBAAC,KAAK,IAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,KAAK,CAAC,KAAK,GAAI,IAEnE,WAAW,CAAC,CAAC,CAAC,CACb,SAAS,CAAC,CAAC,CAAC,CACV,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,iBAAwB,CACjD,CAAC,CAAC,CAAC,CACF,oBAAC,OAAO,IAAC,KAAK,EAAE,KAAK,GAAI,CAC1B,CACF,CAAC,CAAC,CAAC,CACF,oBAAC,UAAU,IAAC,KAAK,EAAE,KAAK,GAAI,CAC7B,CACa,CACZ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,OAAO,CAAA"}

package/dist/components/SequenceTextArea.js

@@ -7,6 +7,7 @@ import Checkbox2 from './Checkbox2';
 const useStyles = makeStyles()({
     textAreaFont: {
         fontFamily: 'Courier New',
+        wordWrap: 'break-word',
     },
     dialogContent: {
         background: 'lightgrey',
@@ -18,7 +19,10 @@ export default function SequenceTextArea({ str }) {
     const { classes } = useStyles();
     const [copied, setCopied] = useState(false);
     const [showGaps, setShowGaps] = useState(false);
+    const [showEmpty, setShowEmpty] = useState(false);
     const disp = str
+        .map(([s1, s2]) => [s1, showGaps ? s2 : s2.replaceAll('-', '')])
+        .filter(f => (showEmpty ? true : !!f[1]))
         .map(([s1, s2]) => `>${s1}\n${showGaps ? s2 : s2.replaceAll('-', '')}`)
         .join('\n');
     return (React.createElement(React.Fragment, null,
@@ -28,6 +32,7 @@ export default function SequenceTextArea({ str }) {
                 setTimeout(() => setCopied(false), 500);
             } }, copied ? 'Copied!' : 'Copy to clipboard'),
         React.createElement(Checkbox2, { label: "Show gaps", checked: showGaps, onChange: () => setShowGaps(!showGaps) }),
+        React.createElement(Checkbox2, { label: "Show empty", checked: showEmpty, onChange: () => setShowEmpty(!showEmpty) }),
         React.createElement(TextField, { variant: "outlined", multiline: true, className: classes.dialogContent, minRows: 5, maxRows: 10, fullWidth: true, value: disp, InputProps: {
                 readOnly: true,
                 classes: {

package/dist/components/SequenceTextArea.js.map

@@ -1 +1 @@
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package/dist/components/dialogs/DomainDialog.d.ts

@@ -0,0 +1,6 @@
+import React from 'react';
+import { MsaViewModel } from '../../model';
+export default function LaunchDomainViewDialog({ handleClose, model, }: {
+    handleClose: () => void;
+    model: MsaViewModel;
+}): React.JSX.Element;

package/dist/components/dialogs/DomainDialog.js

@@ -0,0 +1,19 @@
+import React, { useState } from 'react';
+import { Dialog } from '@jbrowse/core/ui';
+import { Tab, Tabs } from '@mui/material';
+// locals
+import InterProScanPanel from './InterProScanPanel';
+import UserProvidedResultPanel from './UserProvidedResultPanel';
+import TabPanel from './TabPanel';
+export default function LaunchDomainViewDialog({ handleClose, model, }) {
+    const [choice, setChoice] = useState(0);
+    return (React.createElement(Dialog, { maxWidth: "xl", title: "Launch protein view", onClose: () => handleClose(), open: true },
+        React.createElement(Tabs, { value: choice, onChange: (_, val) => setChoice(val) },
+            React.createElement(Tab, { value: 0, label: "Automatic lookup" }),
+            React.createElement(Tab, { value: 1, label: "Manual" })),
+        React.createElement(TabPanel, { value: choice, index: 0 },
+            React.createElement(InterProScanPanel, { model: model, handleClose: handleClose })),
+        React.createElement(TabPanel, { value: choice, index: 1 },
+            React.createElement(UserProvidedResultPanel, { model: model, handleClose: handleClose }))));
+}
+//# sourceMappingURL=DomainDialog.js.map

package/dist/components/dialogs/DomainDialog.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"DomainDialog.js","sourceRoot":"","sources":["../../../src/components/dialogs/DomainDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,GAAG,EAAE,IAAI,EAAE,MAAM,eAAe,CAAA;AAEzC,SAAS;AACT,OAAO,iBAAiB,MAAM,qBAAqB,CAAA;AACnD,OAAO,uBAAuB,MAAM,2BAA2B,CAAA;AAC/D,OAAO,QAAQ,MAAM,YAAY,CAAA;AAGjC,MAAM,CAAC,OAAO,UAAU,sBAAsB,CAAC,EAC7C,WAAW,EACX,KAAK,GAIN;IACC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAA;IACvC,OAAO,CACL,oBAAC,MAAM,IACL,QAAQ,EAAC,IAAI,EACb,KAAK,EAAC,qBAAqB,EAC3B,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,IAAI;QAEJ,oBAAC,IAAI,IAAC,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,CAAC,CAAC,EAAE,GAAG,EAAE,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC;YACvD,oBAAC,GAAG,IAAC,KAAK,EAAE,CAAC,EAAE,KAAK,EAAC,kBAAkB,GAAG;YAC1C,oBAAC,GAAG,IAAC,KAAK,EAAE,CAAC,EAAE,KAAK,EAAC,QAAQ,GAAG,CAC3B;QACP,oBAAC,QAAQ,IAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC;YAC/B,oBAAC,iBAAiB,IAAC,KAAK,EAAE,KAAK,EAAE,WAAW,EAAE,WAAW,GAAI,CACpD;QACX,oBAAC,QAAQ,IAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,CAAC;YAC/B,oBAAC,uBAAuB,IAAC,KAAK,EAAE,KAAK,EAAE,WAAW,EAAE,WAAW,GAAI,CAC1D,CACJ,CACV,CAAA;AACH,CAAC"}

package/dist/components/dialogs/InterProScanPanel.d.ts

@@ -0,0 +1,7 @@
+import React from 'react';
+import { MsaViewModel } from '../../model';
+declare const InterProScanDialog: ({ handleClose, model, }: {
+    handleClose: () => void;
+    model: MsaViewModel;
+}) => React.JSX.Element;
+export default InterProScanDialog;

package/dist/components/dialogs/{InterProScanDialog.js → InterProScanPanel.js}

@@ -1,8 +1,9 @@
 import React, { useState } from 'react';
 import { observer } from 'mobx-react';
-import { Dialog } from '@jbrowse/core/ui';
 import { Button, DialogActions, DialogContent, Typography } from '@mui/material';
-const FeatureTypeDialog = observer(function ({ onClose, model, }) {
+import { getSession } from '@jbrowse/core/util';
+import { launchInterProScan } from '../../launchInterProScan';
+const InterProScanDialog = observer(function ({ handleClose, model, }) {
     const [vals, setVals] = useState([
         {
             name: 'NCBIfam',
@@ -131,7 +132,7 @@ const FeatureTypeDialog = observer(function ({ onClose, model, }) {
     ]);
     const programs = vals.filter(e => e.checked).map(e => e.name);
     const [show, setShow] = useState(false);
-    return (React.createElement(Dialog, { onClose: () => onClose(), open: true, title: "Feature types", maxWidth: "xl" },
+    return (React.createElement(React.Fragment, null,
         React.createElement(DialogContent, null,
             React.createElement(Typography, null, "This will run InterProScan on all rows of the current MSA"),
             React.createElement(Button, { onClick: () => setShow(!show) },
@@ -153,11 +154,38 @@ const FeatureTypeDialog = observer(function ({ onClose, model, }) {
                         React.createElement("td", null, name),
                         React.createElement("td", null, category)))))))) : null),
         React.createElement(DialogActions, null,
-            React.createElement(Button, { variant: "contained", color: "secondary", onClick: () => onClose() }, "Cancel"),
+            React.createElement(Button, { variant: "contained", color: "secondary", onClick: () => handleClose() }, "Cancel"),
             React.createElement(Button, { variant: "contained", color: "primary", onClick: () => {
-                    model.queryInterProScan(programs).catch(e => model.setError(e));
-                    onClose();
+                    // eslint-disable-next-line @typescript-eslint/no-floating-promises
+                    ;
+                    (async () => {
+                        try {
+                            const { rows } = model;
+                            if (rows.length > 140) {
+                                throw new Error('Too many sequences, please run InterProScan offline');
+                            }
+                            await launchInterProScan({
+                                algorithm: 'interproscan',
+                                programs: programs,
+                                seq: rows
+                                    .map(row => [row[0], row[1].replaceAll('-', '')])
+                                    .filter(f => !!f[1])
+                                    .map(row => `>${row[0]}\n${row[1]}`)
+                                    .join('\n'),
+                                onProgress: arg => model.setStatus(arg),
+                                model,
+                            });
+                        }
+                        catch (e) {
+                            console.error(e);
+                            getSession(model).notifyError(`${e}`, e);
+                        }
+                        finally {
+                            model.setStatus();
+                        }
+                    })();
+                    handleClose();
                 } }, "Send sequences to InterProScan"))));
 });
-export default FeatureTypeDialog;
-//# sourceMappingURL=InterProScanDialog.js.map
+export default InterProScanDialog;
+//# sourceMappingURL=InterProScanPanel.js.map

package/dist/components/dialogs/InterProScanPanel.js.map

@@ -0,0 +1 @@
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package/dist/components/dialogs/SettingsDialog.js

@@ -28,14 +28,14 @@ const TreeSettings = observer(function TreeSettings({ model, }) {
         React.createElement(Checkbox2, { checked: drawTree, onChange: () => model.setDrawTree(!drawTree), label: "Show tree?" }),
         React.createElement(Checkbox2, { checked: labelsAlignRight, onChange: () => model.setLabelsAlignRight(!labelsAlignRight), label: "Tree labels align right?" }),
         React.createElement(Checkbox2, { checked: drawLabels, onChange: () => model.setDrawLabels(!drawLabels), label: "Draw labels" }),
-        !noTree ? (React.createElement("div", null,
+        noTree ? null : (React.createElement("div", null,
             React.createElement(Checkbox2, { checked: treeWidthMatchesArea, onChange: () => model.setTreeWidthMatchesArea(!treeWidthMatchesArea), label: "Make tree width fit to tree area?" }),
-            !treeWidthMatchesArea ? (React.createElement("div", { className: classes.flex },
+            treeWidthMatchesArea ? null : (React.createElement("div", { className: classes.flex },
                 React.createElement(Typography, null,
                     "Tree width (",
                     treeWidth,
                     "px)"),
-                React.createElement(Slider, { className: classes.field, min: 50, max: 600, value: treeWidth, onChange: (_, val) => model.setTreeWidth(val) }))) : null)) : null));
+                React.createElement(Slider, { className: classes.field, min: 50, max: 600, value: treeWidth, onChange: (_, val) => model.setTreeWidth(val) })))))));
 });
 const MSASettings = observer(function MSASettings({ model, }) {
     const { classes } = useStyles();

package/dist/components/dialogs/SettingsDialog.js.map

@@ -1 +1 @@
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package/dist/components/dialogs/TabPanel.d.ts

@@ -0,0 +1,6 @@
+import React from 'react';
+export default function TabPanel({ children, value, index, ...other }: {
+    children?: React.ReactNode;
+    index: number;
+    value: number;
+}): React.JSX.Element;

package/dist/components/dialogs/TabPanel.js

@@ -0,0 +1,6 @@
+import React from 'react';
+// this is from MUI example
+export default function TabPanel({ children, value, index, ...other }) {
+    return (React.createElement("div", { role: "tabpanel", hidden: value !== index, ...other }, value === index && React.createElement("div", null, children)));
+}
+//# sourceMappingURL=TabPanel.js.map

package/dist/components/dialogs/TabPanel.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"TabPanel.js","sourceRoot":"","sources":["../../../src/components/dialogs/TabPanel.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AAEzB,2BAA2B;AAC3B,MAAM,CAAC,OAAO,UAAU,QAAQ,CAAC,EAC/B,QAAQ,EACR,KAAK,EACL,KAAK,EACL,GAAG,KAAK,EAKT;IACC,OAAO,CACL,6BAAK,IAAI,EAAC,UAAU,EAAC,MAAM,EAAE,KAAK,KAAK,KAAK,KAAM,KAAK,IACpD,KAAK,KAAK,KAAK,IAAI,iCAAM,QAAQ,CAAO,CACrC,CACP,CAAA;AACH,CAAC"}

package/dist/components/dialogs/{InterProScanDialog.d.ts → UserProvidedResultPanel.d.ts}

@@ -1,7 +1,7 @@
 import React from 'react';
 import { MsaViewModel } from '../../model';
-declare const FeatureTypeDialog: ({ onClose, model, }: {
-    onClose: () => void;
+declare const FeatureTypeDialog: ({ handleClose, model, }: {
+    handleClose: () => void;
     model: MsaViewModel;
 }) => React.JSX.Element;
 export default FeatureTypeDialog;

package/dist/components/dialogs/UserProvidedResultPanel.js

@@ -0,0 +1,56 @@
+import React, { useState } from 'react';
+import { observer } from 'mobx-react';
+import { Button, DialogActions, DialogContent, FormControlLabel, FormControl, Radio, RadioGroup, TextField, Typography, } from '@mui/material';
+import { getSession } from '@jbrowse/core/util';
+import { jsonfetch } from '../../fetchUtils';
+const FeatureTypeDialog = observer(function ({ handleClose, model, }) {
+    const [file, setFile] = useState();
+    const [choice, setChoice] = useState('file');
+    const [interProURL, setInterProURL] = useState('');
+    return (React.createElement(React.Fragment, null,
+        React.createElement(DialogContent, null,
+            React.createElement("div", { style: { display: 'flex', margin: 30 } },
+                React.createElement(Typography, null, "Open a JSON file of InterProScan results that you run remotely on EBI servers or locally"),
+                React.createElement(FormControl, { component: "fieldset" },
+                    React.createElement(RadioGroup, { value: choice, onChange: event => setChoice(event.target.value) },
+                        React.createElement(FormControlLabel, { value: "url", control: React.createElement(Radio, null), label: "URL" }),
+                        React.createElement(FormControlLabel, { value: "file", control: React.createElement(Radio, null), label: "File" }))),
+                choice === 'url' ? (React.createElement("div", null,
+                    React.createElement(Typography, null, "Open a InterProScan JSON file remote URL"),
+                    React.createElement(TextField, { label: "URL", value: interProURL, onChange: event => setInterProURL(event.target.value) }))) : null,
+                choice === 'file' ? (React.createElement("div", { style: { paddingTop: 20 } },
+                    React.createElement(Typography, null, "Open a InterProScan JSON file file from your local drive"),
+                    React.createElement(Button, { variant: "outlined", component: "label" },
+                        "Choose File",
+                        React.createElement("input", { type: "file", hidden: true, onChange: ({ target }) => {
+                                const file = target?.files?.[0];
+                                if (file) {
+                                    setFile(file);
+                                }
+                            } })))) : null)),
+        React.createElement(DialogActions, null,
+            React.createElement(Button, { variant: "contained", color: "primary", onClick: () => {
+                    // eslint-disable-next-line @typescript-eslint/no-floating-promises
+                    ;
+                    (async () => {
+                        try {
+                            const ret = file
+                                ? JSON.parse(await file.text())
+                                : await jsonfetch(interProURL);
+                            model.setLoadedInterProAnnotations(Object.fromEntries(ret.results.map(r => [r.xref[0].id, r])));
+                            model.setShowDomains(true);
+                            getSession(model).notify('Loaded interproscan results', 'success');
+                        }
+                        catch (e) {
+                            console.error(e);
+                            getSession(model).notifyError(`${e}`, e);
+                        }
+                        finally {
+                            model.setStatus();
+                        }
+                    })();
+                    handleClose();
+                } }, "Open results"))));
+});
+export default FeatureTypeDialog;
+//# sourceMappingURL=UserProvidedResultPanel.js.map

package/dist/components/dialogs/UserProvidedResultPanel.js.map

@@ -0,0 +1 @@
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package/dist/components/header/Header.js

@@ -8,12 +8,10 @@ import ZoomControls from './ZoomControls';
 import MultiAlignmentSelector from './MultiAlignmentSelector';
 import HeaderInfoArea from './HeaderInfoArea';
 import HeaderStatusArea from './HeaderStatusArea';
-import HeaderMenu from './HeaderMenu';
 import HeaderMenuExtra from './HeaderMenuExtra';
 const AboutDialog = lazy(() => import('../dialogs/AboutDialog'));
 const Header = observer(function ({ model }) {
     return (React.createElement("div", { style: { display: 'flex' } },
-        React.createElement(HeaderMenu, { model: model }),
         React.createElement(ZoomControls, { model: model }),
         React.createElement(HeaderMenuExtra, { model: model }),
         React.createElement(MultiAlignmentSelector, { model: model }),

package/dist/components/header/Header.js.map

@@ -1 +1 @@
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+{"version":3,"file":"Header.js","sourceRoot":"","sources":["../../../src/components/header/Header.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACnC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAKrC,QAAQ;AACR,OAAO,IAAI,MAAM,0BAA0B,CAAA;AAE3C,SAAS;AACT,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,sBAAsB,MAAM,0BAA0B,CAAA;AAC7D,OAAO,cAAc,MAAM,kBAAkB,CAAA;AAC7C,OAAO,gBAAgB,MAAM,oBAAoB,CAAA;AACjD,OAAO,eAAe,MAAM,mBAAmB,CAAA;AAE/C,MAAM,WAAW,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,wBAAwB,CAAC,CAAC,CAAA;AAEhE,MAAM,MAAM,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAClE,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,EAAE;QAC7B,oBAAC,YAAY,IAAC,KAAK,EAAE,KAAK,GAAI;QAC9B,oBAAC,eAAe,IAAC,KAAK,EAAE,KAAK,GAAI;QACjC,oBAAC,sBAAsB,IAAC,KAAK,EAAE,KAAK,GAAI;QACxC,oBAAC,cAAc,IAAC,KAAK,EAAE,KAAK,GAAI;QAChC,oBAAC,MAAM,OAAG;QACV,oBAAC,gBAAgB,IAAC,KAAK,EAAE,KAAK,GAAI;QAClC,oBAAC,UAAU,IACT,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,WAAW,EAAE,EAAE,OAAO,EAAE,CAAC,CAAC;YAEvE,oBAAC,IAAI,OAAG,CACG,CACT,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,SAAS,MAAM;IACb,OAAO,6BAAK,KAAK,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,GAAI,CAAA;AACpC,CAAC;AAED,eAAe,MAAM,CAAA"}

package/dist/components/header/HeaderMenuExtra.js

@@ -1,6 +1,7 @@
 import React, { lazy } from 'react';
 import { observer } from 'mobx-react';
 import CascadingMenuButton from '@jbrowse/core/ui/CascadingMenuButton';
+// locals
 // icons
 import MoreVert from '@mui/icons-material/MoreVert';
 import Sort from '@mui/icons-material/Sort';
@@ -9,13 +10,40 @@ import FilterAlt from '@mui/icons-material/FilterAlt';
 import Search from '@mui/icons-material/Search';
 import PhotoCamera from '@mui/icons-material/PhotoCamera';
 import RestartAlt from '@mui/icons-material/RestartAlt';
+import FolderOpen from '@mui/icons-material/FolderOpen';
+import Settings from '@mui/icons-material/Settings';
+import Assignment from '@mui/icons-material/Assignment';
+import List from '@mui/icons-material/List';
 // lazies
+const SettingsDialog = lazy(() => import('../dialogs/SettingsDialog'));
+const MetadataDialog = lazy(() => import('../dialogs/MetadataDialog'));
+const TracklistDialog = lazy(() => import('../dialogs/TracklistDialog'));
 const ExportSVGDialog = lazy(() => import('../dialogs/ExportSVGDialog'));
 const FeatureFilterDialog = lazy(() => import('../dialogs/FeatureDialog'));
-const InterProScanDialog = lazy(() => import('../dialogs/InterProScanDialog'));
+const DomainDialog = lazy(() => import('../dialogs/DomainDialog'));
 const HeaderMenuExtra = observer(function ({ model }) {
-    const { featureMode, subFeatureRows, noAnnotations, interProScanJobIds } = model;
+    const { showDomains, subFeatureRows, noAnnotations } = model;
     return (React.createElement(CascadingMenuButton, { menuItems: [
+            {
+                label: 'Return to import form',
+                icon: FolderOpen,
+                onClick: () => model.reset(),
+            },
+            {
+                label: 'Settings',
+                onClick: () => model.queueDialog(onClose => [SettingsDialog, { model, onClose }]),
+                icon: Settings,
+            },
+            {
+                label: 'Metadata',
+                onClick: () => model.queueDialog(onClose => [MetadataDialog, { model, onClose }]),
+                icon: Assignment,
+            },
+            {
+                label: 'Extra tracks',
+                onClick: () => model.queueDialog(onClose => [TracklistDialog, { model, onClose }]),
+                icon: List,
+            },
             {
                 label: 'Reset zoom to default',
                 icon: RestartAlt,
@@ -36,9 +64,9 @@ const HeaderMenuExtra = observer(function ({ model }) {
                     {
                         label: 'Show domains' + (noAnnotations ? ' (no domains loaded)' : ''),
                         icon: Visibility,
-                        checked: featureMode,
+                        checked: showDomains,
                         type: 'checkbox',
-                        onClick: () => model.setFeatureMode(!featureMode),
+                        onClick: () => model.setShowDomains(!showDomains),
                     },
                     {
                         label: 'Use sub-row layout',
@@ -58,30 +86,13 @@ const HeaderMenuExtra = observer(function ({ model }) {
                         },
                     },
                     {
-                        label: 'Query InterProScan for domains...',
+                        label: 'View domains',
                         icon: Search,
-                        onClick: () => model.queueDialog(onClose => [
-                            InterProScanDialog,
-                            { onClose, model },
+                        onClick: () => model.queueDialog(handleClose => [
+                            DomainDialog,
+                            { handleClose, model },
                         ]),
                     },
-                    {
-                        label: 'Load previous InterProScan results...',
-                        icon: Search,
-                        type: 'subMenu',
-                        subMenu: interProScanJobIds.length
-                            ? interProScanJobIds.map(({ jobId, date }) => ({
-                                label: new Date(date).toLocaleString('en-US') + ' - ' + jobId,
-                                onClick: () => model.loadInterProScanResults(jobId),
-                            }))
-                            : [
-                                {
-                                    label: 'No previous searches',
-                                    disabled: true,
-                                    onClick: () => { },
-                                },
-                            ],
-                    },
                 ],
             },
             ...(model.extraViewMenuItems?.() || []),

package/dist/components/header/HeaderMenuExtra.js.map

@@ -1 +1 @@
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+{"version":3,"file":"HeaderMenuExtra.js","sourceRoot":"","sources":["../../../src/components/header/HeaderMenuExtra.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACnC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,mBAAmB,MAAM,sCAAsC,CAAA;AAEtE,SAAS;AAET,QAAQ;AACR,OAAO,QAAQ,MAAM,8BAA8B,CAAA;AACnD,OAAO,IAAI,MAAM,0BAA0B,CAAA;AAC3C,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,SAAS,MAAM,+BAA+B,CAAA;AACrD,OAAO,MAAM,MAAM,4BAA4B,CAAA;AAC/C,OAAO,WAAW,MAAM,iCAAiC,CAAA;AACzD,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,QAAQ,MAAM,8BAA8B,CAAA;AACnD,OAAO,UAAU,MAAM,gCAAgC,CAAA;AACvD,OAAO,IAAI,MAAM,0BAA0B,CAAA;AAK3C,SAAS;AACT,MAAM,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,2BAA2B,CAAC,CAAC,CAAA;AACtE,MAAM,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,2BAA2B,CAAC,CAAC,CAAA;AACtE,MAAM,eAAe,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,4BAA4B,CAAC,CAAC,CAAA;AACxE,MAAM,eAAe,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,4BAA4B,CAAC,CAAC,CAAA;AACxE,MAAM,mBAAmB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,0BAA0B,CAAC,CAAC,CAAA;AAC1E,MAAM,YAAY,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,yBAAyB,CAAC,CAAC,CAAA;AAElE,MAAM,eAAe,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IAC3E,MAAM,EAAE,WAAW,EAAE,cAAc,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAC5D,OAAO,CACL,oBAAC,mBAAmB,IAClB,SAAS,EAAE;YACT;gBACE,KAAK,EAAE,uBAAuB;gBAC9B,IAAI,EAAE,UAAU;gBAChB,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,KAAK,EAAE;aAC7B;YACD;gBACE,KAAK,EAAE,UAAU;gBACjB,OAAO,EAAE,GAAG,EAAE,CACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,cAAc,EAAE,EAAE,KAAK,EAAE,OAAO,EAAE,CAAC,CAAC;gBACpE,IAAI,EAAE,QAAQ;aACf;YACD;gBACE,KAAK,EAAE,UAAU;gBACjB,OAAO,EAAE,GAAG,EAAE,CACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,cAAc,EAAE,EAAE,KAAK,EAAE,OAAO,EAAE,CAAC,CAAC;gBACpE,IAAI,EAAE,UAAU;aACjB;YACD;gBACE,KAAK,EAAE,cAAc;gBACrB,OAAO,EAAE,GAAG,EAAE,CACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,eAAe,EAAE,EAAE,KAAK,EAAE,OAAO,EAAE,CAAC,CAAC;gBACrE,IAAI,EAAE,IAAI;aACX;YACD;gBACE,KAAK,EAAE,uBAAuB;gBAC9B,IAAI,EAAE,UAAU;gBAChB,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,EAAE,CAAC,CAAA;oBACrB,KAAK,CAAC,YAAY,CAAC,EAAE,CAAC,CAAA;gBACxB,CAAC;aACF;YACD;gBACE,KAAK,EAAE,YAAY;gBACnB,IAAI,EAAE,WAAW;gBACjB,OAAO,EAAE,GAAG,EAAE,CACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,eAAe,EAAE,EAAE,OAAO,EAAE,KAAK,EAAE,CAAC,CAAC;aACtE;YACD;gBACE,KAAK,EAAE,0BAA0B;gBACjC,IAAI,EAAE,SAAS;gBACf,OAAO,EAAE;oBACP;wBACE,KAAK,EACH,cAAc,GAAG,CAAC,aAAa,CAAC,CAAC,CAAC,sBAAsB,CAAC,CAAC,CAAC,EAAE,CAAC;wBAChE,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,WAAW;wBACpB,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,cAAc,CAAC,CAAC,WAAW,CAAC;qBAClD;oBACD;wBACE,KAAK,EAAE,oBAAoB;wBAC3B,OAAO,EAAE,cAAc;wBACvB,IAAI,EAAE,IAAI;wBACV,IAAI,EAAE,UAAU;wBAChB,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,iBAAiB,CAAC,CAAC,cAAc,CAAC;qBACxD;oBACD;wBACE,KAAK,EAAE,gBAAgB;wBACvB,IAAI,EAAE,SAAS;wBACf,OAAO,EAAE,GAAG,EAAE;4BACZ,KAAK,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,CAAC;gCAC3B,mBAAmB;gCACnB,EAAE,OAAO,EAAE,KAAK,EAAE;6BACnB,CAAC,CAAA;wBACJ,CAAC;qBACF;oBACD;wBACE,KAAK,EAAE,cAAc;wBACrB,IAAI,EAAE,MAAM;wBACZ,OAAO,EAAE,GAAG,EAAE,CACZ,KAAK,CAAC,WAAW,CAAC,WAAW,CAAC,EAAE,CAAC;4BAC/B,YAAY;4BACZ,EAAE,WAAW,EAAE,KAAK,EAAE;yBACvB,CAAC;qBACL;iBACF;aACF;YACD,GAAG,CAAC,KAAK,CAAC,kBAAkB,EAAE,EAAE,IAAI,EAAE,CAAC;SACxC;QAED,oBAAC,QAAQ,OAAG,CACQ,CACvB,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,eAAe,CAAA"}

package/dist/components/header/HeaderStatusArea.d.ts

@@ -1,6 +1,6 @@
 import React from 'react';
 import { MsaViewModel } from '../../model';
-declare const HeaderStatusArea: ({ model }: {
+declare const HeaderStatusArea: ({ model, }: {
     model: MsaViewModel;
 }) => React.JSX.Element | null;
 export default HeaderStatusArea;

package/dist/components/header/HeaderStatusArea.js

@@ -2,17 +2,18 @@ import React from 'react';
 import { Typography } from '@mui/material';
 import { observer } from 'mobx-react';
 import { makeStyles } from 'tss-react/mui';
+import { LoadingEllipses } from '@jbrowse/core/ui';
 const useStyles = makeStyles()({
     margin: {
         margin: 'auto',
         marginLeft: 10,
     },
 });
-const HeaderStatusArea = observer(({ model }) => {
+const HeaderStatusArea = observer(function ({ model, }) {
     const { status } = model;
     const { classes } = useStyles();
     return status ? (React.createElement(Typography, { className: classes.margin },
-        status.msg,
+        React.createElement(LoadingEllipses, { message: status.msg, component: "span" }),
         ' ',
         status.url ? (React.createElement("a", { href: status.url, target: "_blank", rel: "noreferrer" }, "(status)")) : null)) : null;
 });

package/dist/components/header/HeaderStatusArea.js.map

@@ -1 +1 @@
-{"version":3,"file":"HeaderStatusArea.js","sourceRoot":"","sources":["../../../src/components/header/HeaderStatusArea.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAK1C,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,MAAM,EAAE;QACN,MAAM,EAAE,MAAM;QACd,UAAU,EAAE,EAAE;KACf;CACF,CAAC,CAAA;AAEF,MAAM,gBAAgB,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAA2B,EAAE,EAAE;IACvE,MAAM,EAAE,MAAM,EAAE,GAAG,KAAK,CAAA;IACxB,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,OAAO,MAAM,CAAC,CAAC,CAAC,CACd,oBAAC,UAAU,IAAC,SAAS,EAAE,OAAO,CAAC,MAAM;QAClC,MAAM,CAAC,GAAG;QAAE,GAAG;QACf,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CACZ,2BAAG,IAAI,EAAE,MAAM,CAAC,GAAG,EAAE,MAAM,EAAC,QAAQ,EAAC,GAAG,EAAC,YAAY,eAEjD,CACL,CAAC,CAAC,CAAC,IAAI,CACG,CACd,CAAC,CAAC,CAAC,IAAI,CAAA;AACV,CAAC,CAAC,CAAA;AAEF,eAAe,gBAAgB,CAAA"}
+{"version":3,"file":"HeaderStatusArea.js","sourceRoot":"","sources":["../../../src/components/header/HeaderStatusArea.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAA;AAKlD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,MAAM,EAAE;QACN,MAAM,EAAE,MAAM;QACd,UAAU,EAAE,EAAE;KACf;CACF,CAAC,CAAA;AAEF,MAAM,gBAAgB,GAAG,QAAQ,CAAC,UAAU,EAC1C,KAAK,GAGN;IACC,MAAM,EAAE,MAAM,EAAE,GAAG,KAAK,CAAA;IACxB,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,OAAO,MAAM,CAAC,CAAC,CAAC,CACd,oBAAC,UAAU,IAAC,SAAS,EAAE,OAAO,CAAC,MAAM;QACnC,oBAAC,eAAe,IAAC,OAAO,EAAE,MAAM,CAAC,GAAG,EAAE,SAAS,EAAC,MAAM,GAAG;QAAC,GAAG;QAC5D,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CACZ,2BAAG,IAAI,EAAE,MAAM,CAAC,GAAG,EAAE,MAAM,EAAC,QAAQ,EAAC,GAAG,EAAC,YAAY,eAEjD,CACL,CAAC,CAAC,CAAC,IAAI,CACG,CACd,CAAC,CAAC,CAAC,IAAI,CAAA;AACV,CAAC,CAAC,CAAA;AAEF,eAAe,gBAAgB,CAAA"}

package/dist/components/msa/MSACanvas.js

@@ -1,6 +1,5 @@
 import React, { useEffect, useState, useRef } from 'react';
 import { observer } from 'mobx-react';
-import normalizeWheel from 'normalize-wheel';
 import MSACanvasBlock from './MSACanvasBlock';
 import Loading from './Loading';
 const MSACanvas = observer(function ({ model }) {
@@ -19,10 +18,9 @@ const MSACanvas = observer(function ({ model }) {
         if (!curr) {
             return;
         }
-        function onWheel(origEvent) {
-            const event = normalizeWheel(origEvent);
-            deltaX.current += event.pixelX;
-            deltaY.current += event.pixelY;
+        function onWheel(event) {
+            deltaX.current += event.deltaX;
+            deltaY.current += event.deltaY;
             if (!scheduled.current) {
                 scheduled.current = true;
                 requestAnimationFrame(() => {
@@ -33,8 +31,8 @@ const MSACanvas = observer(function ({ model }) {
                     scheduled.current = false;
                 });
             }
-            origEvent.preventDefault();
-            origEvent.stopPropagation();
+            event.preventDefault();
+            event.stopPropagation();
         }
         curr.addEventListener('wheel', onWheel);
         return () => {
@@ -102,7 +100,7 @@ const MSACanvas = observer(function ({ model }) {
             height,
             width: msaAreaWidth,
             overflow: 'hidden',
-        } }, !MSA && !msaFilehandle ? null : !MSA ? (React.createElement(Loading, null)) : (blocks2d.map(([bx, by]) => (React.createElement(MSACanvasBlock, { key: `${bx}_${by}`, model: model, offsetX: bx, offsetY: by }))))));
+        } }, !MSA && !msaFilehandle ? null : MSA ? (blocks2d.map(([bx, by]) => (React.createElement(MSACanvasBlock, { key: `${bx}_${by}`, model: model, offsetX: bx, offsetY: by })))) : (React.createElement(Loading, null))));
 });
 export default MSACanvas;
 //# sourceMappingURL=MSACanvas.js.map

package/dist/components/msa/MSACanvas.js.map

@@ -1 +1 @@
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+{"version":3,"file":"MSACanvas.js","sourceRoot":"","sources":["../../../src/components/msa/MSACanvas.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AAC1D,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,OAAO,cAAc,MAAM,kBAAkB,CAAA;AAC7C,OAAO,OAAO,MAAM,WAAW,CAAA;AAE/B,MAAM,SAAS,GAAG,QAAQ,CAAC,UAAU,EAAE,KAAK,EAA2B;IACrE,MAAM,EAAE,GAAG,EAAE,aAAa,EAAE,MAAM,EAAE,YAAY,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;IACpE,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,QAAQ;IACR,MAAM,SAAS,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IAC/B,MAAM,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC,CAAA;IACxB,MAAM,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC,CAAA;IACxB,iCAAiC;IACjC,MAAM,KAAK,GAAG,MAAM,CAAS,CAAC,CAAC,CAAA;IAC/B,MAAM,KAAK,GAAG,MAAM,CAAS,CAAC,CAAC,CAAA;IAC/B,MAAM,CAAC,aAAa,EAAE,gBAAgB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IACzD,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,IAAI,GAAG,GAAG,CAAC,OAAO,CAAA;QACxB,IAAI,CAAC,IAAI,EAAE,CAAC;YACV,OAAM;QACR,CAAC;QACD,SAAS,OAAO,CAAC,KAAiB;YAChC,MAAM,CAAC,OAAO,IAAI,KAAK,CAAC,MAAM,CAAA;YAC9B,MAAM,CAAC,OAAO,IAAI,KAAK,CAAC,MAAM,CAAA;YAE9B,IAAI,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC;gBACvB,SAAS,CAAC,OAAO,GAAG,IAAI,CAAA;gBACxB,qBAAqB,CAAC,GAAG,EAAE;oBACzB,KAAK,CAAC,SAAS,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAA;oBAChC,KAAK,CAAC,SAAS,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAA;oBAChC,MAAM,CAAC,OAAO,GAAG,CAAC,CAAA;oBAClB,MAAM,CAAC,OAAO,GAAG,CAAC,CAAA;oBAClB,SAAS,CAAC,OAAO,GAAG,KAAK,CAAA;gBAC3B,CAAC,CAAC,CAAA;YACJ,CAAC;YACD,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,KAAK,CAAC,eAAe,EAAE,CAAA;QACzB,CAAC;QACD,IAAI,CAAC,gBAAgB,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;QACvC,OAAO,GAAG,EAAE;YACV,IAAI,CAAC,mBAAmB,CAAC,OAAO,EAAE,OAAO,CAAC,CAAA;QAC5C,CAAC,CAAA;IACH,CAAC,EAAE,CAAC,KAAK,CAAC,CAAC,CAAA;IAEX,SAAS,CAAC,GAAG,EAAE;QACb,IAAI,OAAO,GAAG,GAAG,EAAE,GAAE,CAAC,CAAA;QAEtB,SAAS,eAAe,CAAC,KAAiB;YACxC,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YAC3B,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YAC3B,MAAM,SAAS,GAAG,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YACvC,MAAM,SAAS,GAAG,KAAK,GAAG,KAAK,CAAC,OAAO,CAAA;YACvC,IAAI,SAAS,IAAI,SAAS,EAAE,CAAC;gBAC3B,uEAAuE;gBACvE,8EAA8E;gBAC9E,IAAI,CAAC,SAAS,CAAC,OAAO,EAAE,CAAC;oBACvB,SAAS,CAAC,OAAO,GAAG,IAAI,CAAA;oBACxB,MAAM,CAAC,qBAAqB,CAAC,GAAG,EAAE;wBAChC,KAAK,CAAC,SAAS,CAAC,SAAS,CAAC,CAAA;wBAC1B,KAAK,CAAC,SAAS,CAAC,SAAS,CAAC,CAAA;wBAC1B,SAAS,CAAC,OAAO,GAAG,KAAK,CAAA;wBACzB,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;wBAC7B,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;oBAC/B,CAAC,CAAC,CAAA;gBACJ,CAAC;YACH,CAAC;QACH,CAAC;QAED,SAAS,aAAa;YACpB,KAAK,CAAC,OAAO,GAAG,CAAC,CAAA;YACjB,IAAI,aAAa,EAAE,CAAC;gBAClB,gBAAgB,CAAC,KAAK,CAAC,CAAA;YACzB,CAAC;QACH,CAAC;QAED,IAAI,aAAa,EAAE,CAAC;YAClB,MAAM,CAAC,gBAAgB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;YAC3D,MAAM,CAAC,gBAAgB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YACvD,OAAO,GAAG,GAAG,EAAE;gBACb,MAAM,CAAC,mBAAmB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;gBAC9D,MAAM,CAAC,mBAAmB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YAC5D,CAAC,CAAA;QACH,CAAC;QACD,OAAO,OAAO,CAAA;IAChB,CAAC,EAAE,CAAC,KAAK,EAAE,aAAa,CAAC,CAAC,CAAA;IAE1B,OAAO,CACL,6BACE,GAAG,EAAE,GAAG,EACR,WAAW,EAAE,KAAK,CAAC,EAAE;YACnB,2DAA2D;YAC3D,MAAM,MAAM,GAAG,KAAK,CAAC,MAAqB,CAAA;YAC1C,IAAI,MAAM,CAAC,SAAS,IAAI,MAAM,CAAC,OAAO,CAAC,OAAO,EAAE,CAAC;gBAC/C,OAAM;YACR,CAAC;YAED,qCAAqC;YACrC,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;gBACvB,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;gBAC7B,KAAK,CAAC,OAAO,GAAG,KAAK,CAAC,OAAO,CAAA;gBAC7B,gBAAgB,CAAC,IAAI,CAAC,CAAA;YACxB,CAAC;QACH,CAAC,EACD,SAAS,EAAE,KAAK,CAAC,EAAE;YACjB,KAAK,CAAC,cAAc,EAAE,CAAA;YACtB,gBAAgB,CAAC,KAAK,CAAC,CAAA;QACzB,CAAC,EACD,YAAY,EAAE,KAAK,CAAC,EAAE;YACpB,KAAK,CAAC,cAAc,EAAE,CAAA;QACxB,CAAC,EACD,KAAK,EAAE;YACL,QAAQ,EAAE,UAAU;YACpB,MAAM;YACN,KAAK,EAAE,YAAY;YACnB,QAAQ,EAAE,QAAQ;SACnB,IAEA,CAAC,GAAG,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CACrC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,CAAC,CACzB,oBAAC,cAAc,IACb,GAAG,EAAE,GAAG,EAAE,IAAI,EAAE,EAAE,EAClB,KAAK,EAAE,KAAK,EACZ,OAAO,EAAE,EAAE,EACX,OAAO,EAAE,EAAE,GACX,CACH,CAAC,CACH,CAAC,CAAC,CAAC,CACF,oBAAC,OAAO,OAAG,CACZ,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,SAAS,CAAA"}

package/dist/components/msa/MSACanvasBlock.js

@@ -19,7 +19,7 @@ const MSABlock = observer(function ({ model, offsetX, offsetY, }) {
         return autorun(() => {
             ctx.resetTransform();
             ctx.clearRect(0, 0, blockSize, blockSize);
-            if (model.featureMode) {
+            if (model.showDomains) {
                 renderBoxFeatureCanvasBlock({
                     ctx,
                     offsetX,

package/dist/components/msa/renderBoxFeatureCanvasBlock.js

@@ -1,6 +1,6 @@
 export function renderBoxFeatureCanvasBlock({ model, offsetX, offsetY, ctx, highResScaleFactorOverride, blockSizeYOverride, }) {
-    const { hierarchy, blockSize, rowHeight, highResScaleFactor, featureMode } = model;
-    if (featureMode) {
+    const { hierarchy, blockSize, rowHeight, highResScaleFactor, showDomains } = model;
+    if (showDomains) {
         const k = highResScaleFactorOverride || highResScaleFactor;
         const by = blockSizeYOverride || blockSize;
         ctx.resetTransform();