react-msaview 2.0.0 → 2.1.1

package/dist/UniprotTrack.js

@@ -27,12 +27,13 @@ export const UniprotTrack = types
         addDisposer(self, autorun(async () => {
             try {
                 const { accession } = self;
-                const url = `https://rest.uniprot.org/uniprotkb/${accession}.gff`;
-                const response = await fetch(url);
-                if (!response.ok) {
-                    throw new Error(`HTTP ${response.status} fetching ${url}: ${await response.text()}`);
+                const accessionSansVersion = accession === null || accession === void 0 ? void 0 : accession.replace(/\.[^/.]+$/, '');
+                const url = `https://rest.uniprot.org/uniprotkb/${accessionSansVersion}.gff`;
+                const res = await fetch(url);
+                if (!res.ok) {
+                    throw new Error(`HTTP ${res.status} fetching ${url}: ${await res.text()}`);
                 }
-                self.setData(await response.text());
+                self.setData(await res.text());
             }
             catch (e) {
                 console.error(e);

package/dist/UniprotTrack.js.map

@@ -1 +1 @@
-{"version":3,"file":"UniprotTrack.js","sourceRoot":"","sources":["../src/UniprotTrack.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAA;AACpD,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAE9B,SAAS;AACT,OAAO,EAAE,QAAQ,EAAE,MAAM,QAAQ,CAAA;AAEjC,MAAM,CAAC,MAAM,YAAY,GAAG,KAAK;KAC9B,KAAK,CAAC;IACL,EAAE,EAAE,KAAK,CAAC,MAAM;IAChB,SAAS,EAAE,KAAK,CAAC,MAAM;IACvB,IAAI,EAAE,KAAK,CAAC,MAAM;IAClB,iBAAiB,EAAE,KAAK,CAAC,MAAM;IAC/B,MAAM,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,GAAG,CAAC;CAC1C,CAAC;KACD,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;IACf,KAAK,EAAE,SAAoB;IAC3B,IAAI,EAAE,SAA+B;CACtC,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAc;QACrB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;IACD,OAAO,CAAC,IAAY;QAClB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;IAClB,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,WAAW;QACT,WAAW,CACT,IAAI,EACJ,OAAO,CAAC,KAAK,IAAI,EAAE;YACjB,IAAI;gBACF,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAA;gBAC1B,MAAM,GAAG,GAAG,sCAAsC,SAAS,MAAM,CAAA;gBACjE,MAAM,QAAQ,GAAG,MAAM,KAAK,CAAC,GAAG,CAAC,CAAA;gBACjC,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE;oBAChB,MAAM,IAAI,KAAK,CACb,QACE,QAAQ,CAAC,MACX,aAAa,GAAG,KAAK,MAAM,QAAQ,CAAC,IAAI,EAAE,EAAE,CAC7C,CAAA;iBACF;gBACD,IAAI,CAAC,OAAO,CAAC,MAAM,QAAQ,CAAC,IAAI,EAAE,CAAC,CAAA;aACpC;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;aACjB;QACH,CAAC,CAAC,CACH,CAAA;IACH,CAAC;CACF,CAAC,CAAC;KACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd,IAAI,OAAO;QACT,OAAO,CAAC,IAAI,CAAC,IAAI,CAAA;IACnB,CAAC;IAED,IAAI,QAAQ;QACV,OAAO,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;IAC5B,CAAC;CACF,CAAC,CAAC,CAAA"}
+{"version":3,"file":"UniprotTrack.js","sourceRoot":"","sources":["../src/UniprotTrack.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAA;AACpD,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAA;AAE9B,SAAS;AACT,OAAO,EAAE,QAAQ,EAAE,MAAM,QAAQ,CAAA;AAEjC,MAAM,CAAC,MAAM,YAAY,GAAG,KAAK;KAC9B,KAAK,CAAC;IACL,EAAE,EAAE,KAAK,CAAC,MAAM;IAChB,SAAS,EAAE,KAAK,CAAC,MAAM;IACvB,IAAI,EAAE,KAAK,CAAC,MAAM;IAClB,iBAAiB,EAAE,KAAK,CAAC,MAAM;IAC/B,MAAM,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,GAAG,CAAC;CAC1C,CAAC;KACD,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;IACf,KAAK,EAAE,SAAoB;IAC3B,IAAI,EAAE,SAA+B;CACtC,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAc;QACrB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;IACD,OAAO,CAAC,IAAY;QAClB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;IAClB,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,WAAW;QACT,WAAW,CACT,IAAI,EACJ,OAAO,CAAC,KAAK,IAAI,EAAE;YACjB,IAAI;gBACF,MAAM,EAAE,SAAS,EAAE,GAAG,IAAI,CAAA;gBAC1B,MAAM,oBAAoB,GAAG,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,OAAO,CAAC,WAAW,EAAE,EAAE,CAAC,CAAA;gBAChE,MAAM,GAAG,GAAG,sCAAsC,oBAAoB,MAAM,CAAA;gBAC5E,MAAM,GAAG,GAAG,MAAM,KAAK,CAAC,GAAG,CAAC,CAAA;gBAC5B,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE;oBACX,MAAM,IAAI,KAAK,CACb,QAAQ,GAAG,CAAC,MAAM,aAAa,GAAG,KAAK,MAAM,GAAG,CAAC,IAAI,EAAE,EAAE,CAC1D,CAAA;iBACF;gBACD,IAAI,CAAC,OAAO,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAC,CAAA;aAC/B;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;aACjB;QACH,CAAC,CAAC,CACH,CAAA;IACH,CAAC;CACF,CAAC,CAAC;KACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd,IAAI,OAAO;QACT,OAAO,CAAC,IAAI,CAAC,IAAI,CAAA;IACnB,CAAC;IAED,IAAI,QAAQ;QACV,OAAO,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;IAC5B,CAAC;CACF,CAAC,CAAC,CAAA"}

package/dist/colorSchemes.d.ts

@@ -1,16 +1,10 @@
 declare const _default: {
-    [k: string]: {
-        [key: string]: string;
-    };
+    [k: string]: Record<string, string>;
 };
 export default _default;
-export declare function getClustalXColor(stats: {
-    [key: string]: number;
-}, model: {
+export declare function getClustalXColor(stats: Record<string, number>, model: {
     columns: Record<string, string>;
 }, row: string, col: number): "rgb(128,179,230)" | "#d88" | "rgb(192, 72, 192)" | "rgb(204, 77, 204)" | "#8f8" | "rgb(26,204,26)" | "rgb(240, 128, 128)" | "rgb(240, 144, 72)" | "rgb(204, 204, 0)" | "rgb(26, 179, 179)" | undefined;
-export declare function getPercentIdentityColor(stats: {
-    [key: string]: number;
-}, model: {
+export declare function getPercentIdentityColor(stats: Record<string, number>, model: {
     columns: Record<string, string>;
 }, row: string, col: number): string | undefined;

package/dist/colorSchemes.js

@@ -1,5 +1,7 @@
-import Color from 'color';
+import { colord, extend } from 'colord';
+import namesPlugin from 'colord/plugins/names';
 import { transform } from './util';
+extend([namesPlugin]);
 const colorSchemes = {
     clustal: {
         G: 'orange',
@@ -325,7 +327,7 @@ const colorSchemes = {
 // requires
 export default transform(colorSchemes, ([key, val]) => [
     key,
-    transform(val, ([letter, color]) => [letter, Color(color).hex()]),
+    transform(val, ([letter, color]) => [letter, colord(color).toHex()]),
 ]);
 // info http://www.jalview.org/help/html/colourSchemes/clustal.html
 // modifications:
@@ -433,10 +435,10 @@ export function getPercentIdentityColor(stats, model, row, col) {
     const entries = Object.entries(stats);
     let ent = 0;
     let letter = '';
-    for (let i = 0; i < entries.length; i++) {
-        if (entries[i][1] > ent && entries[i][0] !== '-') {
-            letter = entries[i][0];
-            ent = entries[i][1];
+    for (const entry of entries) {
+        if (entry[1] > ent && entry[0] !== '-') {
+            letter = entry[0];
+            ent = entry[1];
         }
     }
     const proportion = ent / total;

package/dist/colorSchemes.js.map

@@ -1 +1 @@
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package/dist/components/BoxTrack.d.ts

@@ -1,6 +1,7 @@
+import React from 'react';
 import { IBoxTrack, MsaViewModel } from '../model';
-declare const AnnotationTrack: ({ model, track, }: {
+declare const BoxTrack: ({ model, track, }: {
     model: MsaViewModel;
     track: IBoxTrack;
-}) => JSX.Element;
-export default AnnotationTrack;
+}) => React.JSX.Element;
+export default BoxTrack;

package/dist/components/BoxTrack.js

@@ -1,146 +1,15 @@
-import React, { useRef, useMemo, useEffect } from 'react';
+import React from 'react';
 import { observer } from 'mobx-react';
-import { getSnapshot, isStateTreeNode } from 'mobx-state-tree';
-import Layout from '../layout';
-const AnnotationBlock = observer(function ({ track, model, offsetX, }) {
-    const { blockSize, colWidth, blanks, rowHeight, highResScaleFactor, scrollX, } = model;
-    const { model: { height, features, associatedRowName }, } = track;
-    const feats = isStateTreeNode(features)
-        ? // @ts-expect-error
-            getSnapshot(features)
-        : features;
-    const layout = useMemo(() => {
-        const temp = new Layout();
-        feats === null || feats === void 0 ? void 0 : feats.forEach((feature, index) => {
-            const { start, end } = feature;
-            if (associatedRowName) {
-                const s = model.rowSpecificBpToPx(associatedRowName, start - 1);
-                const e = model.rowSpecificBpToPx(associatedRowName, end);
-                temp.addRect(`${index}`, s, e, rowHeight, feature);
-            }
-            else {
-                const s = model.globalBpToPx(start - 1);
-                const e = model.globalBpToPx(end);
-                temp.addRect(`${index}`, s, e, rowHeight, feature);
-            }
-        });
-        return temp;
-        // might convert to autorun based drawing
-        // eslint-disable-next-line react-hooks/exhaustive-deps
-    }, [rowHeight, feats, associatedRowName, model, blanks]);
-    const ref = useRef(null);
-    const labelRef = useRef(null);
-    const mouseoverRef = useRef(null);
-    useEffect(() => {
-        if (!ref.current) {
-            return;
-        }
-        const ctx = ref.current.getContext('2d');
-        if (!ctx) {
-            return;
-        }
-        ctx.resetTransform();
-        ctx.scale(highResScaleFactor, highResScaleFactor);
-        ctx.clearRect(0, 0, blockSize, height);
-        ctx.translate(-offsetX, 0);
-        ctx.textAlign = 'center';
-        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
-        const xStart = Math.max(0, Math.floor(offsetX / colWidth));
-        ctx.fillStyle = 'goldenrod';
-        layout.rectangles.forEach(value => {
-            const { minX, maxX, minY, maxY } = value;
-            const x1 = (minX - xStart) * colWidth + offsetX - (offsetX % colWidth);
-            const x2 = (maxX - xStart) * colWidth + offsetX - (offsetX % colWidth);
-            if (x2 - x1 > 0) {
-                ctx.fillRect(x1, minY, x2 - x1, (maxY - minY) / 2);
-            }
-        });
-    }, [
-        associatedRowName,
-        blockSize,
-        colWidth,
-        layout.rectangles,
-        model,
-        rowHeight,
-        height,
-        offsetX,
-        highResScaleFactor,
-        features,
-        blanks,
-    ]);
-    useEffect(() => {
-        if (!labelRef.current) {
-            return;
-        }
-        const ctx = labelRef.current.getContext('2d');
-        if (!ctx) {
-            return;
-        }
-        // this logic is very similar to MSACanvas
-        ctx.resetTransform();
-        ctx.scale(highResScaleFactor, highResScaleFactor);
-        ctx.clearRect(0, 0, blockSize, height);
-        ctx.translate(-offsetX, 0);
-        ctx.textAlign = 'center';
-        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
-        ctx.fillStyle = 'black';
-        ctx.textAlign = 'left';
-        layout.rectangles.forEach(value => {
-            var _a, _b, _c, _d;
-            const { minX, maxX, maxY, minY } = value;
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any
-            const feature = value.data;
-            const x1 = minX * colWidth;
-            const x2 = maxX * colWidth;
-            if (x2 - x1 > 0) {
-                const note = (_b = (_a = feature.attributes) === null || _a === void 0 ? void 0 : _a.Note) === null || _b === void 0 ? void 0 : _b[0];
-                const name = (_d = (_c = feature.attributes) === null || _c === void 0 ? void 0 : _c.Name) === null || _d === void 0 ? void 0 : _d[0];
-                const type = feature.type;
-                ctx.fillText([type, name, note].filter(f => !!f).join(' - '), Math.max(Math.min(-scrollX, x2), x1), minY + (maxY - minY));
-            }
-        });
-    }, [
-        blockSize,
-        colWidth,
-        scrollX,
-        highResScaleFactor,
-        height,
-        layout.rectangles,
-        offsetX,
-        features,
-        model,
-        rowHeight,
-        blanks,
-    ]);
-    return !features ? null : (React.createElement(React.Fragment, null,
-        React.createElement("canvas", { ref: ref, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
-                position: 'absolute',
-                left: scrollX + offsetX,
-                width: blockSize,
-                height,
-            } }),
-        React.createElement("canvas", { ref: labelRef, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
-                position: 'absolute',
-                left: scrollX + offsetX,
-                width: blockSize,
-                height,
-            } }),
-        React.createElement("canvas", { ref: mouseoverRef, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
-                position: 'absolute',
-                left: scrollX + offsetX,
-                width: blockSize,
-                height,
-            } })));
-});
-const AnnotationTrack = observer(function ({ model, track, }) {
+import BoxTrackBlock from './BoxTrackBlock';
+const BoxTrack = observer(function ({ model, track, }) {
     const { blocksX, msaAreaWidth } = model;
-    const { model: { height }, } = track;
+    const { height } = track.model;
     return (React.createElement("div", { style: {
             position: 'relative',
             height,
             width: msaAreaWidth,
             overflow: 'hidden',
-        } }, blocksX.map(bx => (React.createElement(AnnotationBlock, { track: track, key: bx, model: model, offsetX: bx })))));
+        } }, blocksX.map(bx => (React.createElement(BoxTrackBlock, { track: track, key: bx, model: model, offsetX: bx })))));
 });
-export default AnnotationTrack;
+export default BoxTrack;
 //# sourceMappingURL=BoxTrack.js.map

package/dist/components/BoxTrack.js.map

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package/dist/components/BoxTrackBlock.d.ts

@@ -0,0 +1,8 @@
+import React from 'react';
+import { IBoxTrack, MsaViewModel } from '../model';
+declare const BoxTrackBlock: ({ track, model, offsetX, }: {
+    track: IBoxTrack;
+    model: MsaViewModel;
+    offsetX: number;
+}) => React.JSX.Element | null;
+export default BoxTrackBlock;

package/dist/components/BoxTrackBlock.js

@@ -0,0 +1,136 @@
+import React, { useRef, useMemo, useEffect } from 'react';
+import { observer } from 'mobx-react';
+import { getSnapshot, isStateTreeNode } from 'mobx-state-tree';
+import Layout from '../layout';
+const BoxTrackBlock = observer(function ({ track, model, offsetX, }) {
+    const { blockSize, colWidth, blanks, rowHeight, highResScaleFactor, scrollX, } = model;
+    const { height, features, associatedRowName } = track.model;
+    const feats = isStateTreeNode(features)
+        ? // @ts-expect-error
+            getSnapshot(features)
+        : features;
+    const layout = useMemo(() => {
+        const temp = new Layout();
+        feats === null || feats === void 0 ? void 0 : feats.forEach((feature, index) => {
+            const { start, end } = feature;
+            if (associatedRowName) {
+                const s = model.rowSpecificBpToPx(associatedRowName, start - 1);
+                const e = model.rowSpecificBpToPx(associatedRowName, end);
+                temp.addRect(`${index}`, s, e, rowHeight, feature);
+            }
+            else {
+                const s = model.globalBpToPx(start - 1);
+                const e = model.globalBpToPx(end);
+                temp.addRect(`${index}`, s, e, rowHeight, feature);
+            }
+        });
+        return temp;
+        // might convert to autorun based drawing
+        // eslint-disable-next-line react-hooks/exhaustive-deps
+    }, [rowHeight, feats, associatedRowName, model, blanks]);
+    const ref = useRef(null);
+    const labelRef = useRef(null);
+    const mouseoverRef = useRef(null);
+    useEffect(() => {
+        if (!ref.current) {
+            return;
+        }
+        const ctx = ref.current.getContext('2d');
+        if (!ctx) {
+            return;
+        }
+        ctx.resetTransform();
+        ctx.scale(highResScaleFactor, highResScaleFactor);
+        ctx.clearRect(0, 0, blockSize, height);
+        ctx.translate(-offsetX, 0);
+        ctx.textAlign = 'center';
+        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
+        const xStart = Math.max(0, Math.floor(offsetX / colWidth));
+        ctx.fillStyle = 'goldenrod';
+        layout.rectangles.forEach(value => {
+            const { minX, maxX, minY, maxY } = value;
+            const x1 = (minX - xStart) * colWidth + offsetX - (offsetX % colWidth);
+            const x2 = (maxX - xStart) * colWidth + offsetX - (offsetX % colWidth);
+            if (x2 - x1 > 0) {
+                ctx.fillRect(x1, minY, x2 - x1, (maxY - minY) / 2);
+            }
+        });
+    }, [
+        associatedRowName,
+        blockSize,
+        colWidth,
+        layout.rectangles,
+        model,
+        rowHeight,
+        height,
+        offsetX,
+        highResScaleFactor,
+        features,
+        blanks,
+    ]);
+    useEffect(() => {
+        var _a, _b, _c, _d;
+        if (!labelRef.current) {
+            return;
+        }
+        const ctx = labelRef.current.getContext('2d');
+        if (!ctx) {
+            return;
+        }
+        // this logic is very similar to MSACanvas
+        ctx.resetTransform();
+        ctx.scale(highResScaleFactor, highResScaleFactor);
+        ctx.clearRect(0, 0, blockSize, height);
+        ctx.translate(-offsetX, 0);
+        ctx.textAlign = 'center';
+        ctx.font = ctx.font.replace(/\d+px/, `${Math.max(8, rowHeight - 8)}px`);
+        ctx.fillStyle = 'black';
+        ctx.textAlign = 'left';
+        for (const value of layout.rectangles.values()) {
+            const { minX, maxX, maxY, minY, data } = value;
+            const x1 = minX * colWidth;
+            const x2 = maxX * colWidth;
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            const feature = data;
+            if (x2 - x1 > 0) {
+                const note = (_b = (_a = feature.attributes) === null || _a === void 0 ? void 0 : _a.Note) === null || _b === void 0 ? void 0 : _b[0];
+                const name = (_d = (_c = feature.attributes) === null || _c === void 0 ? void 0 : _c.Name) === null || _d === void 0 ? void 0 : _d[0];
+                const type = feature.type;
+                ctx.fillText([type, name, note].filter(f => !!f).join(' - '), Math.max(Math.min(-scrollX, x2), x1), minY + (maxY - minY));
+            }
+        }
+    }, [
+        blockSize,
+        colWidth,
+        scrollX,
+        highResScaleFactor,
+        height,
+        layout.rectangles,
+        offsetX,
+        features,
+        model,
+        rowHeight,
+        blanks,
+    ]);
+    return !features ? null : (React.createElement(React.Fragment, null,
+        React.createElement("canvas", { ref: ref, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
+                position: 'absolute',
+                left: scrollX + offsetX,
+                width: blockSize,
+                height,
+            } }),
+        React.createElement("canvas", { ref: labelRef, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
+                position: 'absolute',
+                left: scrollX + offsetX,
+                width: blockSize,
+                height,
+            } }),
+        React.createElement("canvas", { ref: mouseoverRef, height: height * highResScaleFactor, width: blockSize * highResScaleFactor, style: {
+                position: 'absolute',
+                left: scrollX + offsetX,
+                width: blockSize,
+                height,
+            } })));
+});
+export default BoxTrackBlock;
+//# sourceMappingURL=BoxTrackBlock.js.map

package/dist/components/BoxTrackBlock.js.map

@@ -0,0 +1 @@
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package/dist/components/Header.d.ts

@@ -1,5 +1,6 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 declare const Header: ({ model }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default Header;

package/dist/components/Header.js

@@ -1,16 +1,18 @@
-import React, { useState } from 'react';
-import { IconButton, Select, Typography } from '@mui/material';
+import React, { Suspense, lazy, useState } from 'react';
+import { IconButton, Typography } from '@mui/material';
 import { observer } from 'mobx-react';
-import SettingsDialog from './SettingsDlg';
-import AboutDialog from './AboutDlg';
-import DetailsDialog from './DetailsDlg';
-import TracklistDialog from './TracklistDlg';
 // icons
-import FolderOpenIcon from '@mui/icons-material/FolderOpen';
-import SettingsIcon from '@mui/icons-material/Settings';
-import HelpIcon from '@mui/icons-material/Help';
-import AssignmentIcon from '@mui/icons-material/Assignment';
-import ListIcon from '@mui/icons-material/List';
+import FolderOpen from '@mui/icons-material/FolderOpen';
+import Settings from '@mui/icons-material/Settings';
+import Help from '@mui/icons-material/Help';
+import Assignment from '@mui/icons-material/Assignment';
+import List from '@mui/icons-material/List';
+import ZoomControls from './ZoomControls';
+import MultiAlignmentSelector from './MultiAlignmentSelector';
+const SettingsDialog = lazy(() => import('./dialogs/SettingsDlg'));
+const AboutDialog = lazy(() => import('./dialogs/AboutDlg'));
+const DetailsDialog = lazy(() => import('./dialogs/DetailsDlg'));
+const TracklistDialog = lazy(() => import('./dialogs/TracklistDlg'));
 const InfoArea = observer(({ model }) => {
     const { mouseOverRowName, mouseCol } = model;
     return (React.createElement("div", null,
@@ -27,7 +29,6 @@ const Header = observer(({ model }) => {
     const [aboutDialogViz, setAboutDialogViz] = useState(false);
     const [detailsDialogViz, setDetailsDialogViz] = useState(false);
     const [tracklistDialogViz, setTracklistDialogViz] = useState(false);
-    const { currentAlignment, alignmentNames } = model;
     return (React.createElement("div", { style: { display: 'flex' } },
         React.createElement(IconButton, { onClick: async () => {
                 try {
@@ -43,26 +44,27 @@ const Header = observer(({ model }) => {
                     model.setError(e);
                 }
             } },
-            React.createElement(FolderOpenIcon, null)),
+            React.createElement(FolderOpen, null)),
         React.createElement(IconButton, { onClick: () => setSettingsDialogViz(true) },
-            React.createElement(SettingsIcon, null)),
+            React.createElement(Settings, null)),
         React.createElement(IconButton, { onClick: () => setDetailsDialogViz(true) },
-            React.createElement(AssignmentIcon, null)),
+            React.createElement(Assignment, null)),
         React.createElement(IconButton, { onClick: () => setTracklistDialogViz(true) },
-            React.createElement(ListIcon, null)),
-        settingsDialogViz ? (React.createElement(SettingsDialog, { open: true, model: model, onClose: () => setSettingsDialogViz(false) })) : null,
-        aboutDialogViz ? (React.createElement(AboutDialog, { open: true, onClose: () => setAboutDialogViz(false) })) : null,
-        detailsDialogViz ? (React.createElement(DetailsDialog, { open: true, model: model, onClose: () => setDetailsDialogViz(false) })) : null,
-        tracklistDialogViz ? (React.createElement(TracklistDialog, { open: true, model: model, onClose: () => setTracklistDialogViz(false) })) : null,
-        alignmentNames.length > 0 ? (React.createElement(Select, { native: true, value: currentAlignment, size: "small", onChange: event => {
-                model.setCurrentAlignment(+event.target.value);
-                model.setScrollX(0);
-                model.setScrollY(0);
-            } }, alignmentNames.map((option, index) => (React.createElement("option", { key: `${option}-${index}`, value: index }, option))))) : null,
+            React.createElement(List, null)),
+        React.createElement(Suspense, { fallback: null },
+            settingsDialogViz ? (React.createElement(SettingsDialog, { model: model, onClose: () => setSettingsDialogViz(false) })) : null,
+            aboutDialogViz ? (React.createElement(AboutDialog, { onClose: () => setAboutDialogViz(false) })) : null,
+            detailsDialogViz ? (React.createElement(DetailsDialog, { model: model, onClose: () => setDetailsDialogViz(false) })) : null,
+            tracklistDialogViz ? (React.createElement(TracklistDialog, { model: model, onClose: () => setTracklistDialogViz(false) })) : null),
+        React.createElement(MultiAlignmentSelector, { model: model }),
+        React.createElement(ZoomControls, { model: model }),
         React.createElement(InfoArea, { model: model }),
-        React.createElement("div", { style: { flex: 1 } }),
+        React.createElement(Spacer, null),
         React.createElement(IconButton, { onClick: () => setAboutDialogViz(true) },
-            React.createElement(HelpIcon, null))));
+            React.createElement(Help, null))));
 });
+function Spacer() {
+    return React.createElement("div", { style: { flex: 1 } });
+}
 export default Header;
 //# sourceMappingURL=Header.js.map

package/dist/components/Header.js.map

@@ -1 +1 @@
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package/dist/components/ImportForm.d.ts

@@ -1,5 +1,6 @@
+import React from 'react';
 import { MsaViewModel } from '../model';
 declare const _default: ({ model }: {
     model: MsaViewModel;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default _default;

package/dist/components/MSABlock.d.ts

@@ -0,0 +1,8 @@
+import React from 'react';
+import { MsaViewModel } from '../model';
+declare const MSABlock: ({ model, offsetX, offsetY, }: {
+    model: MsaViewModel;
+    offsetX: number;
+    offsetY: number;
+}) => React.JSX.Element;
+export default MSABlock;