raggrep 0.1.0 → 0.1.3

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Files changed (10) hide show
  1. package/README.md +138 -6
  2. package/dist/cli/main.js +539 -36
  3. package/dist/cli/main.js.map +8 -7
  4. package/dist/domain/entities/fileSummary.d.ts +18 -0
  5. package/dist/domain/services/keywords.d.ts +45 -0
  6. package/dist/index.js +141 -7
  7. package/dist/index.js.map +7 -6
  8. package/dist/indexer/index.d.ts +25 -0
  9. package/dist/indexer/watcher.d.ts +33 -0
  10. package/package.json +4 -3
package/dist/cli/main.js.map CHANGED
@@ -1,6 +1,6 @@
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  {
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- "sources": ["../../src/utils/embeddings.ts", "../../src/domain/entities/config.ts", "../../src/domain/entities/index.ts", "../../src/utils/config.ts", "../../src/domain/services/bm25.ts", "../../src/modules/semantic/parseCode.ts", "../../src/domain/services/keywords.ts", "../../src/utils/tieredIndex.ts", "../../src/modules/semantic/index.ts", "../../src/modules/registry.ts", "../../src/indexer/index.ts", "../../src/search/index.ts", "../../src/cli/main.ts"],
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+ "sources": ["../../src/utils/embeddings.ts", "../../src/domain/entities/config.ts", "../../src/domain/entities/index.ts", "../../src/utils/config.ts", "../../src/domain/services/bm25.ts", "../../src/modules/semantic/parseCode.ts", "../../src/domain/services/keywords.ts", "../../src/utils/tieredIndex.ts", "../../src/modules/semantic/index.ts", "../../src/modules/registry.ts", "../../src/indexer/watcher.ts", "../../src/indexer/index.ts", "../../src/search/index.ts", "../../src/cli/main.ts"],
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  "sourcesContent": [
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  "// Local embedding provider using Transformers.js\n// Models are automatically downloaded and cached on first use\n\nimport { pipeline, env, type FeatureExtractionPipeline } from '@xenova/transformers';\nimport * as path from 'path';\nimport * as os from 'os';\n\n// ============================================================================\n// Configuration\n// ============================================================================\n\n// Configure cache directory for models\n// Uses ~/.cache/raggrep/models by default\nconst CACHE_DIR = path.join(os.homedir(), '.cache', 'raggrep', 'models');\n\n// Set the cache directory for transformers.js\nenv.cacheDir = CACHE_DIR;\n\n// Disable local model check (always try to use cache first, then download)\nenv.allowLocalModels = true;\n\n// Available embedding models (smaller = faster, larger = better quality)\nexport const EMBEDDING_MODELS = {\n // Default: Good balance of speed and quality (~33M params, 384 dimensions)\n 'all-MiniLM-L6-v2': 'Xenova/all-MiniLM-L6-v2',\n \n // Higher quality, slightly slower (~33M params, 384 dimensions)\n 'all-MiniLM-L12-v2': 'Xenova/all-MiniLM-L12-v2',\n \n // BGE small - good for code (~33M params, 384 dimensions)\n 'bge-small-en-v1.5': 'Xenova/bge-small-en-v1.5',\n \n // Even smaller/faster option (~22M params, 384 dimensions)\n 'paraphrase-MiniLM-L3-v2': 'Xenova/paraphrase-MiniLM-L3-v2',\n} as const;\n\nexport type EmbeddingModelName = keyof typeof EMBEDDING_MODELS;\n\n// ============================================================================\n// Embedding Provider\n// ============================================================================\n\nlet embeddingPipeline: FeatureExtractionPipeline | null = null;\nlet currentModelName: string | null = null;\nlet isInitializing = false;\nlet initPromise: Promise<void> | null = null;\n\nexport interface EmbeddingConfig {\n model: EmbeddingModelName;\n /** Show progress during model download */\n showProgress?: boolean;\n}\n\nconst DEFAULT_CONFIG: EmbeddingConfig = {\n model: 'all-MiniLM-L6-v2',\n showProgress: true,\n};\n\nlet currentConfig: EmbeddingConfig = { ...DEFAULT_CONFIG };\n\n/**\n * Configure the embedding model\n */\nexport function configureEmbeddings(config: Partial<EmbeddingConfig>): void {\n const newConfig = { ...currentConfig, ...config };\n \n // If model changed, reset pipeline\n if (newConfig.model !== currentConfig.model) {\n embeddingPipeline = null;\n currentModelName = null;\n }\n \n currentConfig = newConfig;\n}\n\n/**\n * Initialize the embedding pipeline (downloads model if needed)\n */\nasync function initializePipeline(): Promise<void> {\n if (embeddingPipeline && currentModelName === currentConfig.model) {\n return;\n }\n \n // Prevent multiple simultaneous initializations\n if (isInitializing && initPromise) {\n return initPromise;\n }\n \n isInitializing = true;\n \n initPromise = (async () => {\n const modelId = EMBEDDING_MODELS[currentConfig.model];\n \n if (currentConfig.showProgress) {\n console.log(`\\n Loading embedding model: ${currentConfig.model}`);\n console.log(` Cache: ${CACHE_DIR}`);\n }\n \n try {\n // Create the feature extraction pipeline\n // This will download the model on first run\n embeddingPipeline = await pipeline('feature-extraction', modelId, {\n progress_callback: currentConfig.showProgress \n ? (progress: { status: string; file?: string; progress?: number; loaded?: number; total?: number }) => {\n if (progress.status === 'progress' && progress.file) {\n const pct = progress.progress ? Math.round(progress.progress) : 0;\n process.stdout.write(`\\r Downloading ${progress.file}: ${pct}% `);\n } else if (progress.status === 'done' && progress.file) {\n process.stdout.write(`\\r Downloaded ${progress.file} \\n`);\n } else if (progress.status === 'ready') {\n // Model is ready\n }\n }\n : undefined,\n });\n \n currentModelName = currentConfig.model;\n \n if (currentConfig.showProgress) {\n console.log(` Model ready.\\n`);\n }\n } catch (error) {\n embeddingPipeline = null;\n currentModelName = null;\n throw new Error(`Failed to load embedding model: ${error}`);\n } finally {\n isInitializing = false;\n initPromise = null;\n }\n })();\n \n return initPromise;\n}\n\n/**\n * Get embedding for a single text\n */\nexport async function getEmbedding(text: string): Promise<number[]> {\n await initializePipeline();\n \n if (!embeddingPipeline) {\n throw new Error('Embedding pipeline not initialized');\n }\n \n // Get embeddings using mean pooling\n const output = await embeddingPipeline(text, {\n pooling: 'mean',\n normalize: true,\n });\n \n // Convert to array\n return Array.from(output.data as Float32Array);\n}\n\n/** Maximum number of texts to process in a single batch */\nconst BATCH_SIZE = 32;\n\n/**\n * Get embeddings for multiple texts (batched for efficiency)\n * \n * Processes texts in batches of BATCH_SIZE for better performance\n * while avoiding memory issues with very large batches.\n * \n * @param texts - Array of texts to embed\n * @returns Array of embedding vectors\n */\nexport async function getEmbeddings(texts: string[]): Promise<number[][]> {\n if (texts.length === 0) return [];\n \n await initializePipeline();\n \n if (!embeddingPipeline) {\n throw new Error('Embedding pipeline not initialized');\n }\n \n const results: number[][] = [];\n \n // Process in batches for efficiency\n for (let i = 0; i < texts.length; i += BATCH_SIZE) {\n const batch = texts.slice(i, i + BATCH_SIZE);\n \n // Process batch - transformers.js handles array inputs\n const outputs = await Promise.all(\n batch.map(async (text) => {\n const output = await embeddingPipeline!(text, {\n pooling: 'mean',\n normalize: true,\n });\n return Array.from(output.data as Float32Array);\n })\n );\n \n results.push(...outputs);\n }\n \n return results;\n}\n\n// ============================================================================\n// Vector Math\n// ============================================================================\n\n/**\n * Calculate cosine similarity between two vectors\n */\nexport function cosineSimilarity(a: number[], b: number[]): number {\n if (a.length !== b.length) {\n throw new Error('Vectors must have the same length');\n }\n\n let dotProduct = 0;\n let normA = 0;\n let normB = 0;\n\n for (let i = 0; i < a.length; i++) {\n dotProduct += a[i] * b[i];\n normA += a[i] * a[i];\n normB += b[i] * b[i];\n }\n\n if (normA === 0 || normB === 0) return 0;\n\n return dotProduct / (Math.sqrt(normA) * Math.sqrt(normB));\n}\n\n/**\n * Get current embedding configuration\n */\nexport function getEmbeddingConfig(): EmbeddingConfig {\n return { ...currentConfig };\n}\n\n/**\n * Get the cache directory path\n */\nexport function getCacheDir(): string {\n return CACHE_DIR;\n}\n\n/**\n * Check if a model is already cached\n */\nexport async function isModelCached(model: EmbeddingModelName = currentConfig.model): Promise<boolean> {\n const modelId = EMBEDDING_MODELS[model];\n const modelPath = path.join(CACHE_DIR, modelId.replace('/', '--'));\n \n try {\n const fs = await import('fs/promises');\n await fs.access(modelPath);\n return true;\n } catch {\n return false;\n }\n}\n",
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  "/**\n * Config Entity\n * \n * Configuration for RAGgrep indexing and search operations.\n */\n\n/**\n * Configuration for a specific index module.\n */\nexport interface ModuleConfig {\n /** Unique module identifier */\n id: string;\n \n /** Whether the module is enabled */\n enabled: boolean;\n \n /** Module-specific options */\n options?: Record<string, unknown>;\n}\n\n/**\n * Main RAGgrep configuration.\n */\nexport interface Config {\n /** RAGgrep version */\n version: string;\n \n /** Directory name for index storage (default: '.raggrep') */\n indexDir: string;\n \n /** File extensions to index (e.g., ['.ts', '.tsx', '.js']) */\n extensions: string[];\n \n /** Paths to ignore during indexing */\n ignorePaths: string[];\n \n /** Enabled modules and their configurations */\n modules: ModuleConfig[];\n}\n\n/**\n * Default paths to ignore during indexing.\n */\nexport const DEFAULT_IGNORE_PATHS = [\n // Package managers & dependencies\n 'node_modules',\n '.pnpm-store',\n '.yarn',\n 'vendor',\n \n // Version control\n '.git',\n \n // Build outputs\n 'dist',\n 'build',\n 'out',\n '.output',\n 'target',\n \n // Framework-specific build outputs\n '.next',\n '.nuxt',\n '.svelte-kit',\n '.vercel',\n '.netlify',\n \n // Caches\n '.cache',\n '.turbo',\n '.parcel-cache',\n '.eslintcache',\n \n // Test & coverage\n 'coverage',\n '.nyc_output',\n \n // Python\n '__pycache__',\n '.venv',\n 'venv',\n '.pytest_cache',\n '*.egg-info',\n \n // IDE & editor\n '.idea',\n \n // RAGgrep index\n '.raggrep',\n];\n\n/**\n * Default file extensions to index.\n */\nexport const DEFAULT_EXTENSIONS = [\n '.ts', '.tsx', '.js', '.jsx',\n '.py', '.go', '.rs', '.java', '.md',\n];\n\n/**\n * Create a default configuration.\n */\nexport function createDefaultConfig(): Config {\n return {\n version: '0.1.0',\n indexDir: '.raggrep',\n extensions: DEFAULT_EXTENSIONS,\n ignorePaths: DEFAULT_IGNORE_PATHS,\n modules: [\n {\n id: 'semantic',\n enabled: true,\n options: {\n embeddingModel: 'all-MiniLM-L6-v2',\n },\n },\n ],\n };\n}\n\n",
@@ -8,15 +8,16 @@
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  "/**\n * Configuration utilities\n * \n * Provides functions for loading, saving, and managing RAGgrep configuration.\n */\n\nimport * as path from 'path';\nimport * as fs from 'fs/promises';\nimport type { Config, ModuleConfig } from '../domain/entities';\nimport { createDefaultConfig } from '../domain/entities';\nimport { EmbeddingConfig, EmbeddingModelName, EMBEDDING_MODELS } from './embeddings';\n\n/** Default configuration instance */\nexport const DEFAULT_CONFIG: Config = createDefaultConfig();\n\n/**\n * Get the root .raggrep directory path\n */\nexport function getRaggrepDir(rootDir: string, config: Config = DEFAULT_CONFIG): string {\n return path.join(rootDir, config.indexDir);\n}\n\n/**\n * Get the index data directory for a specific module\n */\nexport function getModuleIndexPath(rootDir: string, moduleId: string, config: Config = DEFAULT_CONFIG): string {\n return path.join(rootDir, config.indexDir, 'index', moduleId);\n}\n\n/**\n * Get the manifest path for a specific module\n */\nexport function getModuleManifestPath(rootDir: string, moduleId: string, config: Config = DEFAULT_CONFIG): string {\n return path.join(rootDir, config.indexDir, 'index', moduleId, 'manifest.json');\n}\n\n/**\n * Get the global manifest path\n */\nexport function getGlobalManifestPath(rootDir: string, config: Config = DEFAULT_CONFIG): string {\n return path.join(rootDir, config.indexDir, 'manifest.json');\n}\n\n/**\n * Get the config file path\n */\nexport function getConfigPath(rootDir: string, config: Config = DEFAULT_CONFIG): string {\n return path.join(rootDir, config.indexDir, 'config.json');\n}\n\n/**\n * Load config from file or return default\n */\nexport async function loadConfig(rootDir: string): Promise<Config> {\n const configPath = getConfigPath(rootDir, DEFAULT_CONFIG);\n \n try {\n const content = await fs.readFile(configPath, 'utf-8');\n const savedConfig = JSON.parse(content) as Partial<Config>;\n return { ...DEFAULT_CONFIG, ...savedConfig };\n } catch {\n return DEFAULT_CONFIG;\n }\n}\n\n/**\n * Save config to file\n */\nexport async function saveConfig(rootDir: string, config: Config): Promise<void> {\n const configPath = getConfigPath(rootDir, config);\n await fs.mkdir(path.dirname(configPath), { recursive: true });\n await fs.writeFile(configPath, JSON.stringify(config, null, 2));\n}\n\n/**\n * Get module config by ID\n */\nexport function getModuleConfig(config: Config, moduleId: string): ModuleConfig | undefined {\n return config.modules.find(m => m.id === moduleId);\n}\n\n/**\n * Extract embedding config from module options\n */\nexport function getEmbeddingConfigFromModule(moduleConfig: ModuleConfig): EmbeddingConfig {\n const options = moduleConfig.options || {};\n const modelName = (options.embeddingModel as string) || 'all-MiniLM-L6-v2';\n \n // Validate model name\n if (!(modelName in EMBEDDING_MODELS)) {\n console.warn(`Unknown embedding model: ${modelName}, falling back to all-MiniLM-L6-v2`);\n return { model: 'all-MiniLM-L6-v2' };\n }\n \n return {\n model: modelName as EmbeddingModelName,\n showProgress: options.showProgress !== false,\n };\n}\n",
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  "/**\n * BM25 (Best Matching 25) Implementation\n * \n * A ranking function for keyword-based search. This is a pure domain service\n * with no external dependencies - just algorithms operating on data.\n * \n * BM25 estimates relevance of documents to a search query using term frequency\n * and inverse document frequency with length normalization.\n */\n\n/**\n * BM25 parameters\n * - k1: Term frequency saturation (typical: 1.2-2.0)\n * - b: Length normalization (typical: 0.75)\n */\nconst BM25_K1 = 1.5;\nconst BM25_B = 0.75;\n\n/**\n * Tokenize text into normalized terms.\n * \n * @param text - Text to tokenize\n * @returns Array of lowercase tokens\n */\nexport function tokenize(text: string): string[] {\n return text\n .toLowerCase()\n .replace(/[^\\w\\s]/g, ' ')\n .split(/\\s+/)\n .filter(token => token.length > 1);\n}\n\n/**\n * Calculate term frequency (TF) for a term in a document.\n */\nfunction termFrequency(term: string, tokens: string[]): number {\n return tokens.filter(t => t === term).length;\n}\n\n/**\n * Document data for BM25 scoring.\n */\nexport interface BM25Document {\n id: string;\n content: string;\n /** Pre-computed tokens (optional, computed from content if not provided) */\n tokens?: string[];\n}\n\n/**\n * BM25 search result.\n */\nexport interface BM25Result {\n id: string;\n score: number;\n}\n\n/**\n * BM25 search index.\n * \n * This is a pure in-memory data structure with no I/O operations.\n * Build the index by adding documents, then search against it.\n */\nexport class BM25Index {\n private documents: Map<string, { content: string; tokens: string[] }> = new Map();\n private avgDocLength: number = 0;\n private documentFrequencies: Map<string, number> = new Map();\n private totalDocs: number = 0;\n\n /**\n * Add documents to the index.\n * \n * @param documents - Array of documents to index\n */\n addDocuments(documents: BM25Document[]): void {\n let totalLength = this.avgDocLength * this.totalDocs;\n\n for (const doc of documents) {\n const tokens = doc.tokens ?? tokenize(doc.content);\n this.documents.set(doc.id, { content: doc.content, tokens });\n totalLength += tokens.length;\n this.totalDocs++;\n\n // Update document frequencies\n const uniqueTerms = new Set(tokens);\n for (const term of uniqueTerms) {\n const count = this.documentFrequencies.get(term) || 0;\n this.documentFrequencies.set(term, count + 1);\n }\n }\n\n this.avgDocLength = this.totalDocs > 0 ? totalLength / this.totalDocs : 0;\n }\n\n /**\n * Calculate IDF (Inverse Document Frequency) for a term.\n */\n private idf(term: string): number {\n const docFreq = this.documentFrequencies.get(term) || 0;\n if (docFreq === 0) return 0;\n \n // Standard IDF formula with smoothing\n return Math.log(1 + (this.totalDocs - docFreq + 0.5) / (docFreq + 0.5));\n }\n\n /**\n * Calculate BM25 score for a document given query terms.\n */\n private score(tokens: string[], queryTerms: string[]): number {\n const docLength = tokens.length;\n let score = 0;\n\n for (const term of queryTerms) {\n const tf = termFrequency(term, tokens);\n if (tf === 0) continue;\n\n const idfScore = this.idf(term);\n \n // BM25 formula\n const numerator = tf * (BM25_K1 + 1);\n const denominator = tf + BM25_K1 * (1 - BM25_B + BM25_B * (docLength / this.avgDocLength));\n \n score += idfScore * (numerator / denominator);\n }\n\n return score;\n }\n\n /**\n * Search the index with a query.\n * \n * @param query - Search query\n * @param topK - Maximum number of results to return\n * @returns Sorted array of results (highest score first)\n */\n search(query: string, topK: number = 10): BM25Result[] {\n const queryTerms = tokenize(query);\n if (queryTerms.length === 0) return [];\n\n const results: BM25Result[] = [];\n\n for (const [id, { tokens }] of this.documents) {\n const score = this.score(tokens, queryTerms);\n if (score > 0) {\n results.push({ id, score });\n }\n }\n\n results.sort((a, b) => b.score - a.score);\n return results.slice(0, topK);\n }\n\n /**\n * Get the number of indexed documents.\n */\n get size(): number {\n return this.totalDocs;\n }\n\n /**\n * Clear the index.\n */\n clear(): void {\n this.documents.clear();\n this.documentFrequencies.clear();\n this.avgDocLength = 0;\n this.totalDocs = 0;\n }\n}\n\n/**\n * Normalize a raw score to 0-1 range using sigmoid function.\n * \n * @param score - Raw score\n * @param midpoint - Score at which output is 0.5\n * @returns Normalized score between 0 and 1\n */\nexport function normalizeScore(score: number, midpoint: number = 5): number {\n return 1 / (1 + Math.exp(-score / midpoint + 1));\n}\n\n",
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  "/**\n * TypeScript/JavaScript Code Parser\n * \n * Uses the TypeScript Compiler API for accurate AST-based parsing.\n * Extracts semantic chunks: functions, classes, interfaces, types, enums.\n */\n\nimport * as ts from 'typescript';\n\n/**\n * Chunk types that can be extracted from code\n */\nexport type ChunkType = \n | 'function' \n | 'class' \n | 'interface' \n | 'type' \n | 'enum'\n | 'variable'\n | 'block' \n | 'file';\n\n/**\n * Represents a parsed chunk of code with location information\n */\nexport interface ParsedChunk {\n /** The source code content */\n content: string;\n /** 1-based start line number */\n startLine: number;\n /** 1-based end line number */\n endLine: number;\n /** The type of code construct */\n type: ChunkType;\n /** Name of the construct (function name, class name, etc.) */\n name?: string;\n /** Whether this is exported */\n isExported?: boolean;\n /** JSDoc comment if present */\n jsDoc?: string;\n}\n\n/**\n * Parse code into semantic chunks based on file extension\n * @param content - The source code content\n * @param filepath - The file path (used to determine language)\n * @returns Array of parsed chunks\n */\nexport function parseCode(content: string, filepath: string): ParsedChunk[] {\n const ext = filepath.split('.').pop()?.toLowerCase();\n\n // For TypeScript/JavaScript files, use the TypeScript parser\n if (['ts', 'tsx', 'js', 'jsx', 'mts', 'cts', 'mjs', 'cjs'].includes(ext || '')) {\n return parseTypeScript(content, filepath);\n }\n\n // For other files, use simple line-based chunking\n return parseGenericCode(content);\n}\n\n/**\n * Parse TypeScript/JavaScript code using the TypeScript Compiler API\n * @param content - The source code content\n * @param filepath - The file path\n * @returns Array of parsed chunks\n */\nfunction parseTypeScript(content: string, filepath: string): ParsedChunk[] {\n const chunks: ParsedChunk[] = [];\n const lines = content.split('\\n');\n\n // Create a source file from the content\n const sourceFile = ts.createSourceFile(\n filepath,\n content,\n ts.ScriptTarget.Latest,\n true, // setParentNodes\n filepath.endsWith('.tsx') || filepath.endsWith('.jsx') \n ? ts.ScriptKind.TSX \n : ts.ScriptKind.TS\n );\n\n /**\n * Get line numbers for a node (1-based)\n */\n function getLineNumbers(node: ts.Node): { startLine: number; endLine: number } {\n const start = sourceFile.getLineAndCharacterOfPosition(node.getStart());\n const end = sourceFile.getLineAndCharacterOfPosition(node.getEnd());\n return {\n startLine: start.line + 1,\n endLine: end.line + 1,\n };\n }\n\n /**\n * Get the source text for a node\n */\n function getNodeText(node: ts.Node): string {\n return node.getText(sourceFile);\n }\n\n /**\n * Check if a node has export modifier\n */\n function isExported(node: ts.Node): boolean {\n if (!ts.canHaveModifiers(node)) return false;\n const modifiers = ts.getModifiers(node);\n return modifiers?.some(m => m.kind === ts.SyntaxKind.ExportKeyword) ?? false;\n }\n\n /**\n * Get JSDoc comment for a node\n */\n function getJSDoc(node: ts.Node): string | undefined {\n const jsDocNodes = ts.getJSDocCommentsAndTags(node);\n if (jsDocNodes.length === 0) return undefined;\n \n return jsDocNodes\n .map(doc => doc.getText(sourceFile))\n .join('\\n');\n }\n\n /**\n * Get function name from various function declarations\n */\n function getFunctionName(node: ts.Node): string | undefined {\n if (ts.isFunctionDeclaration(node) && node.name) {\n return node.name.text;\n }\n if (ts.isMethodDeclaration(node) && ts.isIdentifier(node.name)) {\n return node.name.text;\n }\n if (ts.isVariableDeclaration(node) && ts.isIdentifier(node.name)) {\n return node.name.text;\n }\n return undefined;\n }\n\n /**\n * Visit nodes recursively to extract chunks\n */\n function visit(node: ts.Node): void {\n const { startLine, endLine } = getLineNumbers(node);\n\n // Function declarations (including async)\n if (ts.isFunctionDeclaration(node) && node.name) {\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'function',\n name: node.name.text,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return; // Don't recurse into function body\n }\n\n // Arrow functions and function expressions assigned to variables\n if (ts.isVariableStatement(node)) {\n for (const decl of node.declarationList.declarations) {\n if (decl.initializer && \n (ts.isArrowFunction(decl.initializer) || ts.isFunctionExpression(decl.initializer))) {\n const name = ts.isIdentifier(decl.name) ? decl.name.text : undefined;\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'function',\n name,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return;\n }\n }\n }\n\n // Class declarations\n if (ts.isClassDeclaration(node) && node.name) {\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'class',\n name: node.name.text,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return; // Don't recurse into class body (it's included in the chunk)\n }\n\n // Interface declarations\n if (ts.isInterfaceDeclaration(node)) {\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'interface',\n name: node.name.text,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return;\n }\n\n // Type alias declarations\n if (ts.isTypeAliasDeclaration(node)) {\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'type',\n name: node.name.text,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return;\n }\n\n // Enum declarations\n if (ts.isEnumDeclaration(node)) {\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'enum',\n name: node.name.text,\n isExported: isExported(node),\n jsDoc: getJSDoc(node),\n });\n return;\n }\n\n // Exported variable declarations (constants)\n if (ts.isVariableStatement(node) && isExported(node)) {\n for (const decl of node.declarationList.declarations) {\n // Skip if it's a function (already handled above)\n if (decl.initializer && \n (ts.isArrowFunction(decl.initializer) || ts.isFunctionExpression(decl.initializer))) {\n continue;\n }\n const name = ts.isIdentifier(decl.name) ? decl.name.text : undefined;\n chunks.push({\n content: getNodeText(node),\n startLine,\n endLine,\n type: 'variable',\n name,\n isExported: true,\n jsDoc: getJSDoc(node),\n });\n }\n return;\n }\n\n // Recurse into children\n ts.forEachChild(node, visit);\n }\n\n // Start visiting from the root\n ts.forEachChild(sourceFile, visit);\n\n // If no semantic chunks found, fall back to block-based chunking\n if (chunks.length === 0) {\n return parseGenericCode(content);\n }\n\n return chunks;\n}\n\n/**\n * Parse generic code using line-based chunking\n * Used for non-TypeScript/JavaScript files or as fallback\n * @param content - The source code content\n * @returns Array of parsed chunks\n */\nfunction parseGenericCode(content: string): ParsedChunk[] {\n const chunks: ParsedChunk[] = [];\n const lines = content.split('\\n');\n const CHUNK_SIZE = 30; // lines per chunk\n const OVERLAP = 5; // overlap between chunks\n\n // If file is small, treat as single chunk\n if (lines.length <= CHUNK_SIZE) {\n return [\n {\n content: content,\n startLine: 1,\n endLine: lines.length,\n type: 'file',\n },\n ];\n }\n\n // Split into overlapping chunks\n for (let i = 0; i < lines.length; i += CHUNK_SIZE - OVERLAP) {\n const endIdx = Math.min(i + CHUNK_SIZE, lines.length);\n chunks.push({\n content: lines.slice(i, endIdx).join('\\n'),\n startLine: i + 1,\n endLine: endIdx,\n type: 'block',\n });\n\n if (endIdx >= lines.length) break;\n }\n\n return chunks;\n}\n\n/**\n * Generate a unique chunk ID from filepath and line numbers\n * @param filepath - The source file path\n * @param startLine - Start line number\n * @param endLine - End line number\n * @returns Unique chunk identifier\n */\nexport function generateChunkId(filepath: string, startLine: number, endLine: number): string {\n const safePath = filepath.replace(/[/\\\\]/g, '-').replace(/\\./g, '_');\n return `${safePath}-${startLine}-${endLine}`;\n}\n",
11
- "/**\n * Keyword Extraction Service\n * \n * Pure domain service for extracting keywords from code.\n * No external dependencies - operates only on string data.\n */\n\n/**\n * Common programming keywords to exclude from keyword extraction.\n * These appear in almost every code file and don't add search value.\n */\nexport const COMMON_KEYWORDS = new Set([\n // JavaScript/TypeScript\n 'const', 'let', 'var', 'function', 'class', 'interface', 'type', 'enum',\n 'export', 'import', 'from', 'return', 'async', 'await', 'new', 'this',\n 'true', 'false', 'null', 'undefined', 'if', 'else', 'for', 'while',\n 'switch', 'case', 'break', 'continue', 'try', 'catch', 'finally',\n 'throw', 'typeof', 'instanceof', 'void', 'delete', 'in', 'of',\n 'string', 'number', 'boolean', 'any', 'unknown', 'never', 'object',\n 'public', 'private', 'protected', 'static', 'readonly', 'abstract',\n 'implements', 'extends', 'super', 'get', 'set', 'constructor',\n // Common words\n 'the', 'and', 'for', 'not', 'with', 'are', 'was', 'has', 'have',\n]);\n\n/**\n * Extract keywords from code content and optional name.\n * \n * @param content - Code content to extract keywords from\n * @param name - Optional name (function name, class name, etc.)\n * @param maxKeywords - Maximum keywords to return (default: 50)\n * @returns Array of unique lowercase keywords\n */\nexport function extractKeywords(\n content: string, \n name?: string,\n maxKeywords: number = 50\n): string[] {\n const keywords = new Set<string>();\n \n // Add the name if present\n if (name) {\n keywords.add(name.toLowerCase());\n \n // Also add camelCase parts (e.g., \"getUserById\" → [\"get\", \"user\", \"by\", \"id\"])\n const parts = name.split(/(?=[A-Z])/).map(p => p.toLowerCase());\n parts.forEach(p => p.length > 2 && keywords.add(p));\n }\n \n // Extract identifiers from content\n const identifierRegex = /\\b([a-zA-Z_][a-zA-Z0-9_]{2,})\\b/g;\n let match;\n \n while ((match = identifierRegex.exec(content)) !== null) {\n const word = match[1].toLowerCase();\n \n // Skip common keywords and very short words\n if (!COMMON_KEYWORDS.has(word) && word.length > 2) {\n keywords.add(word);\n }\n }\n \n return Array.from(keywords).slice(0, maxKeywords);\n}\n\n/**\n * Extract keywords from a file path.\n * \n * @param filepath - File path to extract keywords from\n * @returns Array of keywords from path segments\n */\nexport function extractPathKeywords(filepath: string): string[] {\n return filepath\n .split(/[/\\\\.]/)\n .filter(p => p.length > 2 && !COMMON_KEYWORDS.has(p.toLowerCase()))\n .map(p => p.toLowerCase());\n}\n\n",
11
+ "/**\n * Keyword Extraction Service\n * \n * Pure domain service for extracting keywords from code.\n * No external dependencies - operates only on string data.\n */\n\n/**\n * Common programming keywords to exclude from keyword extraction.\n * These appear in almost every code file and don't add search value.\n */\nexport const COMMON_KEYWORDS = new Set([\n // JavaScript/TypeScript\n 'const', 'let', 'var', 'function', 'class', 'interface', 'type', 'enum',\n 'export', 'import', 'from', 'return', 'async', 'await', 'new', 'this',\n 'true', 'false', 'null', 'undefined', 'if', 'else', 'for', 'while',\n 'switch', 'case', 'break', 'continue', 'try', 'catch', 'finally',\n 'throw', 'typeof', 'instanceof', 'void', 'delete', 'in', 'of',\n 'string', 'number', 'boolean', 'any', 'unknown', 'never', 'object',\n 'public', 'private', 'protected', 'static', 'readonly', 'abstract',\n 'implements', 'extends', 'super', 'get', 'set', 'constructor',\n // Common words\n 'the', 'and', 'for', 'not', 'with', 'are', 'was', 'has', 'have',\n]);\n\n/**\n * Common architectural layer patterns in file names/paths.\n * Used to detect the layer a file belongs to.\n */\nexport const LAYER_PATTERNS: Record<string, string[]> = {\n 'controller': ['controller', 'controllers', 'handler', 'handlers', 'route', 'routes', 'api'],\n 'service': ['service', 'services', 'usecase', 'usecases', 'application'],\n 'repository': ['repository', 'repositories', 'repo', 'repos', 'dao', 'store', 'storage'],\n 'model': ['model', 'models', 'entity', 'entities', 'schema', 'schemas'],\n 'util': ['util', 'utils', 'utility', 'utilities', 'helper', 'helpers', 'common', 'shared'],\n 'config': ['config', 'configs', 'configuration', 'settings'],\n 'middleware': ['middleware', 'middlewares', 'interceptor', 'interceptors'],\n 'domain': ['domain', 'core', 'business'],\n 'infrastructure': ['infrastructure', 'infra', 'external', 'adapters'],\n 'presentation': ['presentation', 'view', 'views', 'component', 'components', 'ui'],\n 'test': ['test', 'tests', 'spec', 'specs', '__tests__', '__test__'],\n};\n\n/**\n * Extract keywords from code content and optional name.\n * \n * @param content - Code content to extract keywords from\n * @param name - Optional name (function name, class name, etc.)\n * @param maxKeywords - Maximum keywords to return (default: 50)\n * @returns Array of unique lowercase keywords\n */\nexport function extractKeywords(\n content: string, \n name?: string,\n maxKeywords: number = 50\n): string[] {\n const keywords = new Set<string>();\n \n // Add the name if present\n if (name) {\n keywords.add(name.toLowerCase());\n \n // Also add camelCase parts (e.g., \"getUserById\" → [\"get\", \"user\", \"by\", \"id\"])\n const parts = name.split(/(?=[A-Z])/).map(p => p.toLowerCase());\n parts.forEach(p => p.length > 2 && keywords.add(p));\n }\n \n // Extract identifiers from content\n const identifierRegex = /\\b([a-zA-Z_][a-zA-Z0-9_]{2,})\\b/g;\n let match;\n \n while ((match = identifierRegex.exec(content)) !== null) {\n const word = match[1].toLowerCase();\n \n // Skip common keywords and very short words\n if (!COMMON_KEYWORDS.has(word) && word.length > 2) {\n keywords.add(word);\n }\n }\n \n return Array.from(keywords).slice(0, maxKeywords);\n}\n\n/**\n * Split a string by camelCase, PascalCase, snake_case, and kebab-case.\n */\nfunction splitIdentifier(str: string): string[] {\n return str\n // Split camelCase and PascalCase\n .replace(/([a-z])([A-Z])/g, '$1 $2')\n // Split snake_case and kebab-case\n .replace(/[_-]/g, ' ')\n .split(/\\s+/)\n .map(s => s.toLowerCase())\n .filter(s => s.length > 1);\n}\n\n/**\n * Extract keywords from a file path.\n * \n * Enhanced extraction that:\n * - Splits camelCase/PascalCase filenames\n * - Extracts directory segments\n * - Recognizes common patterns (Service, Controller, etc.)\n * \n * @param filepath - File path to extract keywords from\n * @returns Array of keywords from path segments\n */\nexport function extractPathKeywords(filepath: string): string[] {\n const keywords = new Set<string>();\n \n // Split path into segments (excluding extension)\n const pathWithoutExt = filepath.replace(/\\.[^.]+$/, '');\n const segments = pathWithoutExt.split(/[/\\\\]/);\n \n for (const segment of segments) {\n if (segment.length < 2) continue;\n \n // Add the full segment\n const lower = segment.toLowerCase();\n if (!COMMON_KEYWORDS.has(lower) && lower.length > 2) {\n keywords.add(lower);\n }\n \n // Split camelCase/PascalCase/snake_case and add parts\n const parts = splitIdentifier(segment);\n for (const part of parts) {\n if (!COMMON_KEYWORDS.has(part) && part.length > 2) {\n keywords.add(part);\n }\n }\n }\n \n return Array.from(keywords);\n}\n\n/**\n * Path context information extracted from a file path.\n */\nexport interface PathContext {\n /** Directory segments (excluding filename) */\n segments: string[];\n /** Detected architectural layer (service, controller, repository, etc.) */\n layer?: string;\n /** Detected feature domain (auth, users, payments, etc.) */\n domain?: string;\n /** Path depth (number of directory levels) */\n depth: number;\n /** Keywords extracted from the path */\n keywords: string[];\n}\n\n/**\n * Parse a file path and extract structural context.\n * \n * This helps with:\n * - Boosting files in related directories\n * - Understanding architectural layer\n * - Grouping by feature domain\n * \n * @param filepath - File path to parse\n * @returns Parsed path context\n */\nexport function parsePathContext(filepath: string): PathContext {\n const pathWithoutExt = filepath.replace(/\\.[^.]+$/, '');\n const allSegments = pathWithoutExt.split(/[/\\\\]/);\n const filename = allSegments[allSegments.length - 1];\n const dirSegments = allSegments.slice(0, -1);\n \n // Extract keywords from all segments\n const keywords = extractPathKeywords(filepath);\n \n // Detect layer from filename and path\n let layer: string | undefined;\n const allLower = [...dirSegments, filename].map(s => s.toLowerCase()).join(' ');\n const filenameLower = filename.toLowerCase();\n \n for (const [layerName, patterns] of Object.entries(LAYER_PATTERNS)) {\n for (const pattern of patterns) {\n // Check filename first (higher priority)\n if (filenameLower.includes(pattern)) {\n layer = layerName;\n break;\n }\n // Check path segments\n if (dirSegments.some(s => s.toLowerCase() === pattern)) {\n layer = layerName;\n break;\n }\n }\n if (layer) break;\n }\n \n // Detect domain from non-layer directory names\n // e.g., src/services/auth/authService.ts → domain = \"auth\"\n // Traverse from innermost to outermost to find the most specific domain\n let domain: string | undefined;\n const layerPatternSet = new Set(Object.values(LAYER_PATTERNS).flat());\n \n // Create a reversed copy to traverse from innermost to outermost\n const reversedSegments = [...dirSegments].reverse();\n for (const segment of reversedSegments) {\n const lower = segment.toLowerCase();\n // Skip common non-domain directories\n if (['src', 'lib', 'app', 'packages', 'modules'].includes(lower)) continue;\n // Skip layer directories\n if (layerPatternSet.has(lower)) continue;\n // This is likely the domain\n if (lower.length > 2) {\n domain = lower;\n break;\n }\n }\n \n return {\n segments: dirSegments,\n layer,\n domain,\n depth: dirSegments.length,\n keywords,\n };\n}\n\n/**\n * Generate a path context string for embedding.\n * This is prepended to content to give the embedding model path awareness.\n * \n * @param pathContext - Parsed path context\n * @returns A string representation of the path context\n */\nexport function formatPathContextForEmbedding(pathContext: PathContext): string {\n const parts: string[] = [];\n \n if (pathContext.domain) {\n parts.push(pathContext.domain);\n }\n \n if (pathContext.layer) {\n parts.push(pathContext.layer);\n }\n \n // Add significant path segments (limit to avoid noise)\n const significantSegments = pathContext.segments\n .slice(-3) // Last 3 directories\n .filter(s => s.length > 2 && !['src', 'lib', 'app'].includes(s.toLowerCase()));\n \n if (significantSegments.length > 0) {\n parts.push(...significantSegments.map(s => s.toLowerCase()));\n }\n \n if (parts.length === 0) return '';\n \n // Deduplicate\n const unique = [...new Set(parts)];\n return `[${unique.join(' ')}]`;\n}\n\n",
12
12
  "/**\n * Symbolic Index System\n * \n * Provides fast keyword-based filtering using BM25 before semantic search.\n * \n * Structure:\n * .raggrep/index/<module>/symbolic/\n * ├── _meta.json (BM25 statistics)\n * └── <filepath>.json (per-file summaries)\n * \n * This approach scales well because:\n * - Each file summary is stored separately\n * - BM25 metadata is small and loads quickly\n * - Summaries are loaded on-demand during search\n */\n\nimport * as fs from 'fs/promises';\nimport * as path from 'path';\nimport { BM25Index } from '../domain/services/bm25';\nimport { extractKeywords, extractPathKeywords } from '../domain/services/keywords';\nimport type { FileSummary, SymbolicIndexMeta } from '../domain/entities';\n\n// Re-export for backwards compatibility\nexport type { FileSummary, SymbolicIndexMeta } from '../domain/entities';\nexport { extractKeywords } from '../domain/services/keywords';\n\n/** @deprecated Use SymbolicIndexMeta */\nexport type Tier1Manifest = SymbolicIndexMeta & { files: Record<string, FileSummary> };\n\n/**\n * Symbolic Index Manager\n * \n * Manages the keyword-based index for fast file filtering.\n */\nexport class SymbolicIndex {\n private meta: SymbolicIndexMeta | null = null;\n private fileSummaries: Map<string, FileSummary> = new Map();\n private bm25Index: BM25Index | null = null;\n private symbolicPath: string;\n private moduleId: string;\n\n constructor(indexDir: string, moduleId: string) {\n this.symbolicPath = path.join(indexDir, 'index', moduleId, 'symbolic');\n this.moduleId = moduleId;\n }\n\n /**\n * Initialize or load the symbolic index\n */\n async initialize(): Promise<void> {\n try {\n await this.load();\n } catch {\n // Create empty metadata\n this.meta = {\n version: '1.0.0',\n lastUpdated: new Date().toISOString(),\n moduleId: this.moduleId,\n fileCount: 0,\n bm25Data: {\n avgDocLength: 0,\n documentFrequencies: {},\n totalDocs: 0,\n },\n };\n this.bm25Index = new BM25Index();\n }\n }\n\n /**\n * Add or update a file summary\n */\n addFile(summary: FileSummary): void {\n this.fileSummaries.set(summary.filepath, summary);\n }\n\n /**\n * Remove a file from the index\n */\n removeFile(filepath: string): boolean {\n return this.fileSummaries.delete(filepath);\n }\n\n /**\n * Build BM25 index from file summaries\n */\n buildBM25Index(): void {\n this.bm25Index = new BM25Index();\n \n // Add each file's keywords as a document\n for (const [filepath, summary] of this.fileSummaries) {\n const content = [\n ...summary.keywords,\n ...summary.exports,\n ...extractPathKeywords(filepath),\n ].join(' ');\n \n this.bm25Index.addDocuments([{ id: filepath, content }]);\n }\n \n // Update metadata\n if (this.meta) {\n this.meta.fileCount = this.fileSummaries.size;\n this.meta.bm25Data.totalDocs = this.fileSummaries.size;\n }\n }\n\n /**\n * Find candidate files using BM25 keyword search\n */\n findCandidates(query: string, maxCandidates: number = 20): string[] {\n if (!this.bm25Index) {\n return Array.from(this.fileSummaries.keys());\n }\n \n const results = this.bm25Index.search(query, maxCandidates);\n return results.map(r => r.id);\n }\n\n /**\n * Get all file paths in the index\n */\n getAllFiles(): string[] {\n return Array.from(this.fileSummaries.keys());\n }\n\n /**\n * Get summary for a specific file\n */\n getFileSummary(filepath: string): FileSummary | undefined {\n return this.fileSummaries.get(filepath);\n }\n\n /**\n * Save the index to disk (per-file structure)\n */\n async save(): Promise<void> {\n if (!this.meta) throw new Error('Index not initialized');\n \n // Update metadata\n this.meta.lastUpdated = new Date().toISOString();\n this.meta.fileCount = this.fileSummaries.size;\n \n // Ensure symbolic directory exists\n await fs.mkdir(this.symbolicPath, { recursive: true });\n \n // Save metadata\n const metaPath = path.join(this.symbolicPath, '_meta.json');\n await fs.writeFile(metaPath, JSON.stringify(this.meta, null, 2));\n \n // Save each file summary\n for (const [filepath, summary] of this.fileSummaries) {\n const summaryPath = this.getFileSummaryPath(filepath);\n await fs.mkdir(path.dirname(summaryPath), { recursive: true });\n await fs.writeFile(summaryPath, JSON.stringify(summary, null, 2));\n }\n }\n\n /**\n * Load the index from disk\n */\n async load(): Promise<void> {\n // Load metadata\n const metaPath = path.join(this.symbolicPath, '_meta.json');\n const metaContent = await fs.readFile(metaPath, 'utf-8');\n this.meta = JSON.parse(metaContent);\n \n // Load all file summaries by walking the symbolic directory\n this.fileSummaries.clear();\n await this.loadFileSummariesRecursive(this.symbolicPath);\n \n // Rebuild BM25 index\n this.buildBM25Index();\n }\n\n /**\n * Recursively load file summaries from the symbolic directory\n */\n private async loadFileSummariesRecursive(dir: string): Promise<void> {\n try {\n const entries = await fs.readdir(dir, { withFileTypes: true });\n \n for (const entry of entries) {\n const fullPath = path.join(dir, entry.name);\n \n if (entry.isDirectory()) {\n await this.loadFileSummariesRecursive(fullPath);\n } else if (entry.name.endsWith('.json') && entry.name !== '_meta.json') {\n try {\n const content = await fs.readFile(fullPath, 'utf-8');\n const summary = JSON.parse(content) as FileSummary;\n if (summary.filepath) {\n this.fileSummaries.set(summary.filepath, summary);\n }\n } catch {\n // Skip invalid files\n }\n }\n }\n } catch {\n // Directory doesn't exist yet\n }\n }\n\n /**\n * Get the path for a file summary\n */\n private getFileSummaryPath(filepath: string): string {\n const jsonPath = filepath.replace(/\\.[^.]+$/, '.json');\n return path.join(this.symbolicPath, jsonPath);\n }\n\n /**\n * Delete a file summary from disk\n */\n async deleteFileSummary(filepath: string): Promise<void> {\n try {\n await fs.unlink(this.getFileSummaryPath(filepath));\n } catch {\n // Ignore if file doesn't exist\n }\n this.fileSummaries.delete(filepath);\n }\n\n /**\n * Check if the index exists on disk\n */\n async exists(): Promise<boolean> {\n try {\n const metaPath = path.join(this.symbolicPath, '_meta.json');\n await fs.access(metaPath);\n return true;\n } catch {\n return false;\n }\n }\n\n /**\n * Get the number of indexed files\n */\n get size(): number {\n return this.fileSummaries.size;\n }\n\n /**\n * Clear the index\n */\n clear(): void {\n this.fileSummaries.clear();\n if (this.meta) {\n this.meta.fileCount = 0;\n this.meta.bm25Data = {\n avgDocLength: 0,\n documentFrequencies: {},\n totalDocs: 0,\n };\n }\n this.bm25Index = new BM25Index();\n }\n}\n\n// ============================================================================\n// Backwards compatibility aliases\n// ============================================================================\n\n/** @deprecated Use SymbolicIndex instead */\nexport const Tier1Index = SymbolicIndex;\n\n/** @deprecated Use SymbolicIndex instead */\nexport function getTier1Path(rootDir: string, moduleId: string, indexDir: string = '.raggrep'): string {\n return path.join(rootDir, indexDir, 'index', moduleId, 'tier1.json');\n}\n\nexport function getSymbolicPath(rootDir: string, moduleId: string, indexDir: string = '.raggrep'): string {\n return path.join(rootDir, indexDir, 'index', moduleId, 'symbolic');\n}\n",
13
- "/**\n * Semantic Index Module\n * \n * Uses local text embeddings for natural language code search.\n * Implements a tiered index system:\n * - Tier 1: Lightweight file summaries with keywords for fast filtering\n * - Tier 2: Full chunk embeddings for semantic similarity\n * \n * This approach keeps the filesystem-based design while enabling\n * efficient search by only loading relevant files.\n */\n\nimport * as path from 'path';\nimport {\n IndexModule,\n IndexContext,\n SearchContext,\n SearchOptions,\n FileIndex,\n SearchResult,\n Chunk,\n ModuleConfig,\n ChunkType,\n} from '../../types';\nimport {\n getEmbeddings,\n getEmbedding,\n cosineSimilarity,\n configureEmbeddings,\n EmbeddingConfig,\n getEmbeddingConfig,\n} from '../../utils/embeddings';\nimport { BM25Index, normalizeScore } from '../../utils/bm25';\nimport { getEmbeddingConfigFromModule, getRaggrepDir } from '../../utils/config';\nimport { parseCode, generateChunkId } from './parseCode';\nimport { SymbolicIndex, FileSummary, extractKeywords } from '../../utils/tieredIndex';\n\n/** Default minimum similarity score for search results */\nexport const DEFAULT_MIN_SCORE = 0.15;\n\n/** Default number of results to return */\nexport const DEFAULT_TOP_K = 10;\n\n/** Weight for semantic similarity in hybrid scoring (0-1) */\nconst SEMANTIC_WEIGHT = 0.7;\n\n/** Weight for BM25 keyword matching in hybrid scoring (0-1) */\nconst BM25_WEIGHT = 0.3;\n\n/**\n * Module-specific data stored alongside file index\n */\nexport interface SemanticModuleData {\n embeddings: number[][];\n /** Store the model used for these embeddings for compatibility checking */\n embeddingModel: string;\n [key: string]: unknown; // Index signature for compatibility with Record<string, unknown>\n}\n\n/** Number of candidate files to retrieve from Tier 1 before loading Tier 2 */\nconst TIER1_CANDIDATE_MULTIPLIER = 3;\n\nexport class SemanticModule implements IndexModule {\n readonly id = 'semantic';\n readonly name = 'Semantic Search';\n readonly description = 'Natural language code search using local text embeddings';\n readonly version = '1.0.0';\n\n private embeddingConfig: EmbeddingConfig | null = null;\n private symbolicIndex: SymbolicIndex | null = null;\n private pendingSummaries: Map<string, FileSummary> = new Map();\n private rootDir: string = '';\n\n async initialize(config: ModuleConfig): Promise<void> {\n // Extract embedding config from module options\n this.embeddingConfig = getEmbeddingConfigFromModule(config);\n \n // Configure the embedding provider\n configureEmbeddings(this.embeddingConfig);\n \n // Clear pending summaries for fresh indexing\n this.pendingSummaries.clear();\n }\n\n async indexFile(\n filepath: string,\n content: string,\n ctx: IndexContext\n ): Promise<FileIndex | null> {\n // Store rootDir for finalize\n this.rootDir = ctx.rootDir;\n \n // Parse code into chunks\n const parsedChunks = parseCode(content, filepath);\n\n if (parsedChunks.length === 0) {\n return null;\n }\n\n // Generate embeddings for all chunks\n const chunkContents = parsedChunks.map((c) => c.content);\n const embeddings = await getEmbeddings(chunkContents);\n\n // Create chunks with all metadata\n const chunks: Chunk[] = parsedChunks.map((pc) => ({\n id: generateChunkId(filepath, pc.startLine, pc.endLine),\n content: pc.content,\n startLine: pc.startLine,\n endLine: pc.endLine,\n type: pc.type,\n name: pc.name,\n isExported: pc.isExported,\n jsDoc: pc.jsDoc,\n }));\n\n // Extract references (imports)\n const references = this.extractReferences(content, filepath);\n\n const stats = await ctx.getFileStats(filepath);\n const currentConfig = getEmbeddingConfig();\n\n const moduleData: SemanticModuleData = {\n embeddings,\n embeddingModel: currentConfig.model,\n };\n\n // Build Tier 1 summary for this file\n const chunkTypes = [...new Set(parsedChunks.map(pc => pc.type))] as ChunkType[];\n const exports = parsedChunks\n .filter(pc => pc.isExported && pc.name)\n .map(pc => pc.name!);\n \n // Extract keywords from all chunks\n const allKeywords = new Set<string>();\n for (const pc of parsedChunks) {\n const keywords = extractKeywords(pc.content, pc.name);\n keywords.forEach(k => allKeywords.add(k));\n }\n\n const fileSummary: FileSummary = {\n filepath,\n chunkCount: chunks.length,\n chunkTypes,\n keywords: Array.from(allKeywords),\n exports,\n lastModified: stats.lastModified,\n };\n \n // Store summary for finalize\n this.pendingSummaries.set(filepath, fileSummary);\n\n return {\n filepath,\n lastModified: stats.lastModified,\n chunks,\n moduleData,\n references,\n };\n }\n\n /**\n * Finalize indexing by building and saving the symbolic index\n */\n async finalize(ctx: IndexContext): Promise<void> {\n const indexDir = getRaggrepDir(ctx.rootDir, ctx.config);\n \n // Initialize symbolic index\n this.symbolicIndex = new SymbolicIndex(indexDir, this.id);\n await this.symbolicIndex.initialize();\n \n // Add all pending summaries\n for (const [filepath, summary] of this.pendingSummaries) {\n this.symbolicIndex.addFile(summary);\n }\n \n // Build BM25 index from summaries\n this.symbolicIndex.buildBM25Index();\n \n // Save to disk (creates symbolic/ folder with per-file summaries)\n await this.symbolicIndex.save();\n \n console.log(` Symbolic index built with ${this.pendingSummaries.size} file summaries`);\n \n // Clear pending summaries\n this.pendingSummaries.clear();\n }\n\n /**\n * Search the semantic index for chunks matching the query.\n * \n * Uses a tiered approach for efficient search:\n * 1. Tier 1: Use BM25 on file summaries to find candidate files\n * 2. Tier 2: Load only candidate files and compute semantic similarity\n * \n * @param query - Natural language search query\n * @param ctx - Search context with index access\n * @param options - Search options (topK, minScore, filePatterns)\n * @returns Array of search results sorted by relevance\n */\n async search(\n query: string,\n ctx: SearchContext,\n options: SearchOptions = {}\n ): Promise<SearchResult[]> {\n const { topK = DEFAULT_TOP_K, minScore = DEFAULT_MIN_SCORE, filePatterns } = options;\n\n // Load symbolic index for candidate filtering\n const indexDir = getRaggrepDir(ctx.rootDir, ctx.config);\n const symbolicIndex = new SymbolicIndex(indexDir, this.id);\n \n let candidateFiles: string[];\n \n try {\n await symbolicIndex.initialize();\n \n // Use BM25 keyword search on symbolic index to find candidate files\n const maxCandidates = topK * TIER1_CANDIDATE_MULTIPLIER;\n candidateFiles = symbolicIndex.findCandidates(query, maxCandidates);\n \n // If no candidates found via BM25, fall back to all files\n if (candidateFiles.length === 0) {\n candidateFiles = symbolicIndex.getAllFiles();\n }\n } catch {\n // Symbolic index doesn't exist, fall back to loading all files\n candidateFiles = await ctx.listIndexedFiles();\n }\n\n // Apply file pattern filter\n if (filePatterns && filePatterns.length > 0) {\n candidateFiles = candidateFiles.filter(filepath => {\n return filePatterns.some(pattern => {\n if (pattern.startsWith('*.')) {\n const ext = pattern.slice(1);\n return filepath.endsWith(ext);\n }\n return filepath.includes(pattern);\n });\n });\n }\n\n // Get query embedding for semantic search\n const queryEmbedding = await getEmbedding(query);\n\n // Tier 2: Load only candidate files and compute scores\n const bm25Index = new BM25Index();\n const allChunksData: Array<{\n filepath: string;\n chunk: Chunk;\n embedding: number[];\n }> = [];\n\n for (const filepath of candidateFiles) {\n const fileIndex = await ctx.loadFileIndex(filepath);\n if (!fileIndex) continue;\n\n const moduleData = fileIndex.moduleData as unknown as SemanticModuleData;\n if (!moduleData?.embeddings) continue;\n\n for (let i = 0; i < fileIndex.chunks.length; i++) {\n const chunk = fileIndex.chunks[i];\n const embedding = moduleData.embeddings[i];\n\n if (!embedding) continue;\n\n allChunksData.push({\n filepath: fileIndex.filepath,\n chunk,\n embedding,\n });\n\n // Add to BM25 index for chunk-level keyword matching\n bm25Index.addDocuments([{ id: chunk.id, content: chunk.content }]);\n }\n }\n\n // Perform BM25 search at chunk level\n const bm25Results = bm25Index.search(query, topK * 3);\n const bm25Scores = new Map<string, number>();\n \n for (const result of bm25Results) {\n bm25Scores.set(result.id, normalizeScore(result.score, 3));\n }\n\n // Calculate hybrid scores for all chunks\n const results: SearchResult[] = [];\n\n for (const { filepath, chunk, embedding } of allChunksData) {\n const semanticScore = cosineSimilarity(queryEmbedding, embedding);\n const bm25Score = bm25Scores.get(chunk.id) || 0;\n \n // Hybrid score: weighted combination of semantic and BM25\n const hybridScore = (SEMANTIC_WEIGHT * semanticScore) + (BM25_WEIGHT * bm25Score);\n\n if (hybridScore >= minScore || bm25Score > 0.3) {\n results.push({\n filepath,\n chunk,\n score: hybridScore,\n moduleId: this.id,\n context: {\n semanticScore,\n bm25Score,\n },\n });\n }\n }\n\n // Sort by score descending and take top K\n results.sort((a, b) => b.score - a.score);\n return results.slice(0, topK);\n }\n\n private extractReferences(content: string, filepath: string): string[] {\n const references: string[] = [];\n\n // Extract import statements\n const importRegex = /import\\s+.*?\\s+from\\s+['\"]([^'\"]+)['\"]/g;\n const requireRegex = /require\\s*\\(\\s*['\"]([^'\"]+)['\"]\\s*\\)/g;\n\n let match;\n while ((match = importRegex.exec(content)) !== null) {\n const importPath = match[1];\n if (importPath.startsWith('.')) {\n const dir = path.dirname(filepath);\n const resolved = path.normalize(path.join(dir, importPath));\n references.push(resolved);\n }\n }\n\n while ((match = requireRegex.exec(content)) !== null) {\n const importPath = match[1];\n if (importPath.startsWith('.')) {\n const dir = path.dirname(filepath);\n const resolved = path.normalize(path.join(dir, importPath));\n references.push(resolved);\n }\n }\n\n return references;\n }\n}\n",
13
+ "/**\n * Semantic Index Module\n * \n * Uses local text embeddings for natural language code search.\n * Implements a tiered index system:\n * - Tier 1: Lightweight file summaries with keywords for fast filtering\n * - Tier 2: Full chunk embeddings for semantic similarity\n * \n * This approach keeps the filesystem-based design while enabling\n * efficient search by only loading relevant files.\n */\n\nimport * as path from 'path';\nimport {\n IndexModule,\n IndexContext,\n SearchContext,\n SearchOptions,\n FileIndex,\n SearchResult,\n Chunk,\n ModuleConfig,\n ChunkType,\n} from '../../types';\nimport {\n getEmbeddings,\n getEmbedding,\n cosineSimilarity,\n configureEmbeddings,\n EmbeddingConfig,\n getEmbeddingConfig,\n} from '../../utils/embeddings';\nimport { BM25Index, normalizeScore } from '../../utils/bm25';\nimport { getEmbeddingConfigFromModule, getRaggrepDir } from '../../utils/config';\nimport { parseCode, generateChunkId } from './parseCode';\nimport { SymbolicIndex, extractKeywords } from '../../utils/tieredIndex';\nimport type { FileSummary } from '../../domain/entities';\nimport { parsePathContext, formatPathContextForEmbedding } from '../../domain/services/keywords';\n\n/** Default minimum similarity score for search results */\nexport const DEFAULT_MIN_SCORE = 0.15;\n\n/** Default number of results to return */\nexport const DEFAULT_TOP_K = 10;\n\n/** Weight for semantic similarity in hybrid scoring (0-1) */\nconst SEMANTIC_WEIGHT = 0.7;\n\n/** Weight for BM25 keyword matching in hybrid scoring (0-1) */\nconst BM25_WEIGHT = 0.3;\n\n/**\n * Module-specific data stored alongside file index\n */\nexport interface SemanticModuleData {\n embeddings: number[][];\n /** Store the model used for these embeddings for compatibility checking */\n embeddingModel: string;\n [key: string]: unknown; // Index signature for compatibility with Record<string, unknown>\n}\n\n/** Number of candidate files to retrieve from Tier 1 before loading Tier 2 */\nconst TIER1_CANDIDATE_MULTIPLIER = 3;\n\nexport class SemanticModule implements IndexModule {\n readonly id = 'semantic';\n readonly name = 'Semantic Search';\n readonly description = 'Natural language code search using local text embeddings';\n readonly version = '1.0.0';\n\n private embeddingConfig: EmbeddingConfig | null = null;\n private symbolicIndex: SymbolicIndex | null = null;\n private pendingSummaries: Map<string, FileSummary> = new Map();\n private rootDir: string = '';\n\n async initialize(config: ModuleConfig): Promise<void> {\n // Extract embedding config from module options\n this.embeddingConfig = getEmbeddingConfigFromModule(config);\n \n // Configure the embedding provider\n configureEmbeddings(this.embeddingConfig);\n \n // Clear pending summaries for fresh indexing\n this.pendingSummaries.clear();\n }\n\n async indexFile(\n filepath: string,\n content: string,\n ctx: IndexContext\n ): Promise<FileIndex | null> {\n // Store rootDir for finalize\n this.rootDir = ctx.rootDir;\n \n // Parse code into chunks\n const parsedChunks = parseCode(content, filepath);\n\n if (parsedChunks.length === 0) {\n return null;\n }\n\n // Parse path context for structural awareness\n const pathContext = parsePathContext(filepath);\n const pathPrefix = formatPathContextForEmbedding(pathContext);\n\n // Generate embeddings for all chunks with path context\n // Prepending path context helps the embedding model understand file structure\n const chunkContents = parsedChunks.map((c) => {\n // For named chunks, include the name for better embedding\n const namePrefix = c.name ? `${c.name}: ` : '';\n return `${pathPrefix} ${namePrefix}${c.content}`;\n });\n const embeddings = await getEmbeddings(chunkContents);\n\n // Create chunks with all metadata\n const chunks: Chunk[] = parsedChunks.map((pc) => ({\n id: generateChunkId(filepath, pc.startLine, pc.endLine),\n content: pc.content,\n startLine: pc.startLine,\n endLine: pc.endLine,\n type: pc.type,\n name: pc.name,\n isExported: pc.isExported,\n jsDoc: pc.jsDoc,\n }));\n\n // Extract references (imports)\n const references = this.extractReferences(content, filepath);\n\n const stats = await ctx.getFileStats(filepath);\n const currentConfig = getEmbeddingConfig();\n\n const moduleData: SemanticModuleData = {\n embeddings,\n embeddingModel: currentConfig.model,\n };\n\n // Build Tier 1 summary for this file\n const chunkTypes = [...new Set(parsedChunks.map(pc => pc.type))] as ChunkType[];\n const exports = parsedChunks\n .filter(pc => pc.isExported && pc.name)\n .map(pc => pc.name!);\n \n // Extract keywords from all chunks + path keywords\n const allKeywords = new Set<string>();\n for (const pc of parsedChunks) {\n const keywords = extractKeywords(pc.content, pc.name);\n keywords.forEach(k => allKeywords.add(k));\n }\n // Add path keywords\n pathContext.keywords.forEach(k => allKeywords.add(k));\n\n const fileSummary: FileSummary = {\n filepath,\n chunkCount: chunks.length,\n chunkTypes,\n keywords: Array.from(allKeywords),\n exports,\n lastModified: stats.lastModified,\n // Include parsed path context for search boosting\n pathContext: {\n segments: pathContext.segments,\n layer: pathContext.layer,\n domain: pathContext.domain,\n depth: pathContext.depth,\n },\n };\n \n // Store summary for finalize\n this.pendingSummaries.set(filepath, fileSummary);\n\n return {\n filepath,\n lastModified: stats.lastModified,\n chunks,\n moduleData,\n references,\n };\n }\n\n /**\n * Finalize indexing by building and saving the symbolic index\n */\n async finalize(ctx: IndexContext): Promise<void> {\n const indexDir = getRaggrepDir(ctx.rootDir, ctx.config);\n \n // Initialize symbolic index\n this.symbolicIndex = new SymbolicIndex(indexDir, this.id);\n await this.symbolicIndex.initialize();\n \n // Add all pending summaries\n for (const [filepath, summary] of this.pendingSummaries) {\n this.symbolicIndex.addFile(summary);\n }\n \n // Build BM25 index from summaries\n this.symbolicIndex.buildBM25Index();\n \n // Save to disk (creates symbolic/ folder with per-file summaries)\n await this.symbolicIndex.save();\n \n console.log(` Symbolic index built with ${this.pendingSummaries.size} file summaries`);\n \n // Clear pending summaries\n this.pendingSummaries.clear();\n }\n\n /**\n * Search the semantic index for chunks matching the query.\n * \n * Uses a tiered approach for efficient search:\n * 1. Tier 1: Use BM25 on file summaries to find candidate files\n * 2. Tier 2: Load only candidate files and compute semantic similarity\n * \n * @param query - Natural language search query\n * @param ctx - Search context with index access\n * @param options - Search options (topK, minScore, filePatterns)\n * @returns Array of search results sorted by relevance\n */\n async search(\n query: string,\n ctx: SearchContext,\n options: SearchOptions = {}\n ): Promise<SearchResult[]> {\n const { topK = DEFAULT_TOP_K, minScore = DEFAULT_MIN_SCORE, filePatterns } = options;\n\n // Load symbolic index for candidate filtering\n const indexDir = getRaggrepDir(ctx.rootDir, ctx.config);\n const symbolicIndex = new SymbolicIndex(indexDir, this.id);\n \n let candidateFiles: string[];\n \n try {\n await symbolicIndex.initialize();\n \n // Use BM25 keyword search on symbolic index to find candidate files\n const maxCandidates = topK * TIER1_CANDIDATE_MULTIPLIER;\n candidateFiles = symbolicIndex.findCandidates(query, maxCandidates);\n \n // If no candidates found via BM25, fall back to all files\n if (candidateFiles.length === 0) {\n candidateFiles = symbolicIndex.getAllFiles();\n }\n } catch {\n // Symbolic index doesn't exist, fall back to loading all files\n candidateFiles = await ctx.listIndexedFiles();\n }\n\n // Apply file pattern filter\n if (filePatterns && filePatterns.length > 0) {\n candidateFiles = candidateFiles.filter(filepath => {\n return filePatterns.some(pattern => {\n if (pattern.startsWith('*.')) {\n const ext = pattern.slice(1);\n return filepath.endsWith(ext);\n }\n return filepath.includes(pattern);\n });\n });\n }\n\n // Get query embedding for semantic search\n const queryEmbedding = await getEmbedding(query);\n\n // Tier 2: Load only candidate files and compute scores\n const bm25Index = new BM25Index();\n const allChunksData: Array<{\n filepath: string;\n chunk: Chunk;\n embedding: number[];\n }> = [];\n\n for (const filepath of candidateFiles) {\n const fileIndex = await ctx.loadFileIndex(filepath);\n if (!fileIndex) continue;\n\n const moduleData = fileIndex.moduleData as unknown as SemanticModuleData;\n if (!moduleData?.embeddings) continue;\n\n for (let i = 0; i < fileIndex.chunks.length; i++) {\n const chunk = fileIndex.chunks[i];\n const embedding = moduleData.embeddings[i];\n\n if (!embedding) continue;\n\n allChunksData.push({\n filepath: fileIndex.filepath,\n chunk,\n embedding,\n });\n\n // Add to BM25 index for chunk-level keyword matching\n bm25Index.addDocuments([{ id: chunk.id, content: chunk.content }]);\n }\n }\n\n // Perform BM25 search at chunk level\n const bm25Results = bm25Index.search(query, topK * 3);\n const bm25Scores = new Map<string, number>();\n \n for (const result of bm25Results) {\n bm25Scores.set(result.id, normalizeScore(result.score, 3));\n }\n\n // Extract query terms for path matching\n const queryTerms = query.toLowerCase().split(/\\s+/).filter(t => t.length > 2);\n \n // Build path boost map from file summaries\n const pathBoosts = new Map<string, number>();\n for (const filepath of candidateFiles) {\n const summary = symbolicIndex.getFileSummary(filepath);\n if (summary?.pathContext) {\n let boost = 0;\n const ctx = summary.pathContext;\n \n // Check if query terms match domain\n if (ctx.domain && queryTerms.some(t => ctx.domain!.includes(t) || t.includes(ctx.domain!))) {\n boost += 0.1;\n }\n \n // Check if query terms match layer\n if (ctx.layer && queryTerms.some(t => ctx.layer!.includes(t) || t.includes(ctx.layer!))) {\n boost += 0.05;\n }\n \n // Check if query terms match path segments\n const segmentMatch = ctx.segments.some(seg => \n queryTerms.some(t => seg.toLowerCase().includes(t) || t.includes(seg.toLowerCase()))\n );\n if (segmentMatch) {\n boost += 0.05;\n }\n \n pathBoosts.set(filepath, boost);\n }\n }\n\n // Calculate hybrid scores for all chunks\n const results: SearchResult[] = [];\n\n for (const { filepath, chunk, embedding } of allChunksData) {\n const semanticScore = cosineSimilarity(queryEmbedding, embedding);\n const bm25Score = bm25Scores.get(chunk.id) || 0;\n const pathBoost = pathBoosts.get(filepath) || 0;\n \n // Hybrid score: weighted combination of semantic, BM25, and path boost\n const hybridScore = (SEMANTIC_WEIGHT * semanticScore) + (BM25_WEIGHT * bm25Score) + pathBoost;\n\n if (hybridScore >= minScore || bm25Score > 0.3) {\n results.push({\n filepath,\n chunk,\n score: hybridScore,\n moduleId: this.id,\n context: {\n semanticScore,\n bm25Score,\n pathBoost,\n },\n });\n }\n }\n\n // Sort by score descending and take top K\n results.sort((a, b) => b.score - a.score);\n return results.slice(0, topK);\n }\n\n private extractReferences(content: string, filepath: string): string[] {\n const references: string[] = [];\n\n // Extract import statements\n const importRegex = /import\\s+.*?\\s+from\\s+['\"]([^'\"]+)['\"]/g;\n const requireRegex = /require\\s*\\(\\s*['\"]([^'\"]+)['\"]\\s*\\)/g;\n\n let match;\n while ((match = importRegex.exec(content)) !== null) {\n const importPath = match[1];\n if (importPath.startsWith('.')) {\n const dir = path.dirname(filepath);\n const resolved = path.normalize(path.join(dir, importPath));\n references.push(resolved);\n }\n }\n\n while ((match = requireRegex.exec(content)) !== null) {\n const importPath = match[1];\n if (importPath.startsWith('.')) {\n const dir = path.dirname(filepath);\n const resolved = path.normalize(path.join(dir, importPath));\n references.push(resolved);\n }\n }\n\n return references;\n }\n}\n",
14
14
  "// Module registry - manages available index modules\nimport { IndexModule, ModuleRegistry, Config } from '../types';\n\nclass ModuleRegistryImpl implements ModuleRegistry {\n private modules = new Map<string, IndexModule>();\n\n register(module: IndexModule): void {\n if (this.modules.has(module.id)) {\n console.warn(`Module '${module.id}' is already registered, overwriting...`);\n }\n this.modules.set(module.id, module);\n }\n\n get(id: string): IndexModule | undefined {\n return this.modules.get(id);\n }\n\n list(): IndexModule[] {\n return Array.from(this.modules.values());\n }\n\n getEnabled(config: Config): IndexModule[] {\n const enabledIds = new Set(\n config.modules\n .filter(m => m.enabled)\n .map(m => m.id)\n );\n \n return this.list().filter(m => enabledIds.has(m.id));\n }\n}\n\n// Global singleton registry\nexport const registry: ModuleRegistry = new ModuleRegistryImpl();\n\n// Auto-register built-in modules\nexport async function registerBuiltInModules(): Promise<void> {\n // Dynamic import to avoid circular dependencies\n const { SemanticModule } = await import('./semantic');\n registry.register(new SemanticModule());\n}\n",
15
- "// Main indexer - coordinates modules for indexing files\nimport { glob } from 'glob';\nimport * as fs from 'fs/promises';\nimport * as path from 'path';\nimport {\n Config,\n IndexContext,\n IndexModule,\n ModuleManifest,\n GlobalManifest,\n FileIndex,\n} from '../types';\nimport {\n DEFAULT_CONFIG,\n loadConfig,\n getModuleIndexPath,\n getModuleManifestPath,\n getGlobalManifestPath,\n getModuleConfig,\n} from '../utils/config';\nimport { registry, registerBuiltInModules } from '../modules/registry';\nimport { EmbeddingModelName } from '../utils/embeddings';\n\nexport interface IndexResult {\n moduleId: string;\n indexed: number;\n skipped: number;\n errors: number;\n}\n\nexport interface IndexOptions {\n /** Override the embedding model (semantic module) */\n model?: EmbeddingModelName;\n /** Show detailed progress */\n verbose?: boolean;\n}\n\nexport interface CleanupResult {\n moduleId: string;\n /** Number of stale entries removed */\n removed: number;\n /** Number of valid entries kept */\n kept: number;\n}\n\n/**\n * Index a directory using all enabled modules\n */\nexport async function indexDirectory(rootDir: string, options: IndexOptions = {}): Promise<IndexResult[]> {\n const verbose = options.verbose ?? false;\n \n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n console.log(`Indexing directory: ${rootDir}`);\n\n // Load config\n const config = await loadConfig(rootDir);\n\n // Register built-in modules\n await registerBuiltInModules();\n\n // Get enabled modules\n const enabledModules = registry.getEnabled(config);\n\n if (enabledModules.length === 0) {\n console.log('No modules enabled. Check your configuration.');\n return [];\n }\n\n console.log(`Enabled modules: ${enabledModules.map((m) => m.id).join(', ')}`);\n\n // Get all files matching extensions\n const files = await findFiles(rootDir, config);\n console.log(`Found ${files.length} files to index`);\n\n // Index with each module\n const results: IndexResult[] = [];\n\n for (const module of enabledModules) {\n console.log(`\\n[${module.name}] Starting indexing...`);\n\n // Initialize module if needed\n const moduleConfig = getModuleConfig(config, module.id);\n if (module.initialize && moduleConfig) {\n // Apply CLI overrides to module config\n const configWithOverrides = { ...moduleConfig };\n if (options.model && module.id === 'semantic') {\n configWithOverrides.options = {\n ...configWithOverrides.options,\n embeddingModel: options.model,\n };\n }\n await module.initialize(configWithOverrides);\n }\n\n const result = await indexWithModule(rootDir, files, module, config, verbose);\n results.push(result);\n\n // Call finalize to build secondary indexes (Tier 1, BM25, etc.)\n if (module.finalize) {\n console.log(`[${module.name}] Building secondary indexes...`);\n const ctx: IndexContext = {\n rootDir,\n config,\n readFile: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n return fs.readFile(fullPath, 'utf-8');\n },\n getFileStats: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n const stats = await fs.stat(fullPath);\n return { lastModified: stats.mtime.toISOString() };\n },\n };\n await module.finalize(ctx);\n }\n\n console.log(`[${module.name}] Complete: ${result.indexed} indexed, ${result.skipped} skipped, ${result.errors} errors`);\n }\n\n // Update global manifest\n await updateGlobalManifest(rootDir, enabledModules, config);\n\n return results;\n}\n\n/**\n * Index files with a specific module\n */\nasync function indexWithModule(\n rootDir: string,\n files: string[],\n module: IndexModule,\n config: Config,\n verbose: boolean\n): Promise<IndexResult> {\n const result: IndexResult = {\n moduleId: module.id,\n indexed: 0,\n skipped: 0,\n errors: 0,\n };\n\n // Load existing manifest for this module\n const manifest = await loadModuleManifest(rootDir, module.id, config);\n\n // Create index context\n const ctx: IndexContext = {\n rootDir,\n config,\n readFile: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n return fs.readFile(fullPath, 'utf-8');\n },\n getFileStats: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n const stats = await fs.stat(fullPath);\n return { lastModified: stats.mtime.toISOString() };\n },\n };\n\n // Process each file\n for (const filepath of files) {\n const relativePath = path.relative(rootDir, filepath);\n \n try {\n const stats = await fs.stat(filepath);\n const lastModified = stats.mtime.toISOString();\n\n // Check if file needs re-indexing\n const existingEntry = manifest.files[relativePath];\n if (existingEntry && existingEntry.lastModified === lastModified) {\n if (verbose) {\n console.log(` Skipped ${relativePath} (unchanged)`);\n }\n result.skipped++;\n continue;\n }\n\n // Read and index file\n const content = await fs.readFile(filepath, 'utf-8');\n \n if (verbose) {\n console.log(` Processing ${relativePath}...`);\n }\n const fileIndex = await module.indexFile(relativePath, content, ctx);\n\n if (!fileIndex) {\n if (verbose) {\n console.log(` Skipped ${relativePath} (no chunks)`);\n }\n result.skipped++;\n continue;\n }\n\n // Write index file\n await writeFileIndex(rootDir, module.id, relativePath, fileIndex, config);\n\n // Update manifest\n manifest.files[relativePath] = {\n lastModified,\n chunkCount: fileIndex.chunks.length,\n };\n\n result.indexed++;\n } catch (error) {\n console.error(` Error indexing ${relativePath}:`, error);\n result.errors++;\n }\n }\n\n // Update manifest\n manifest.lastUpdated = new Date().toISOString();\n await writeModuleManifest(rootDir, module.id, manifest, config);\n\n return result;\n}\n\nasync function findFiles(rootDir: string, config: Config): Promise<string[]> {\n const patterns = config.extensions.map((ext) => `**/*${ext}`);\n const ignorePatterns = config.ignorePaths.map((p) => `**/${p}/**`);\n\n const files: string[] = [];\n for (const pattern of patterns) {\n const matches = await glob(pattern, {\n cwd: rootDir,\n absolute: true,\n ignore: ignorePatterns,\n });\n files.push(...matches);\n }\n\n return [...new Set(files)]; // Remove duplicates\n}\n\nasync function loadModuleManifest(\n rootDir: string,\n moduleId: string,\n config: Config\n): Promise<ModuleManifest> {\n const manifestPath = getModuleManifestPath(rootDir, moduleId, config);\n\n try {\n const content = await fs.readFile(manifestPath, 'utf-8');\n return JSON.parse(content);\n } catch {\n return {\n moduleId,\n version: '1.0.0',\n lastUpdated: new Date().toISOString(),\n files: {},\n };\n }\n}\n\nasync function writeModuleManifest(\n rootDir: string,\n moduleId: string,\n manifest: ModuleManifest,\n config: Config\n): Promise<void> {\n const manifestPath = getModuleManifestPath(rootDir, moduleId, config);\n await fs.mkdir(path.dirname(manifestPath), { recursive: true });\n await fs.writeFile(manifestPath, JSON.stringify(manifest, null, 2));\n}\n\nasync function writeFileIndex(\n rootDir: string,\n moduleId: string,\n filepath: string,\n fileIndex: FileIndex,\n config: Config\n): Promise<void> {\n const indexPath = getModuleIndexPath(rootDir, moduleId, config);\n const indexFilePath = path.join(indexPath, filepath.replace(/\\.[^.]+$/, '.json'));\n\n await fs.mkdir(path.dirname(indexFilePath), { recursive: true });\n await fs.writeFile(indexFilePath, JSON.stringify(fileIndex, null, 2));\n}\n\nasync function updateGlobalManifest(\n rootDir: string,\n modules: IndexModule[],\n config: Config\n): Promise<void> {\n const manifestPath = getGlobalManifestPath(rootDir, config);\n\n const manifest: GlobalManifest = {\n version: config.version,\n lastUpdated: new Date().toISOString(),\n modules: modules.map((m) => m.id),\n };\n\n await fs.mkdir(path.dirname(manifestPath), { recursive: true });\n await fs.writeFile(manifestPath, JSON.stringify(manifest, null, 2));\n}\n\n/**\n * Clean up stale index entries for files that no longer exist\n * @param rootDir - Root directory of the project\n * @param options - Cleanup options\n * @returns Array of cleanup results per module\n */\nexport async function cleanupIndex(\n rootDir: string, \n options: { verbose?: boolean } = {}\n): Promise<CleanupResult[]> {\n const verbose = options.verbose ?? false;\n \n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n console.log(`Cleaning up index in: ${rootDir}`);\n\n // Load config\n const config = await loadConfig(rootDir);\n\n // Register built-in modules\n await registerBuiltInModules();\n\n // Get enabled modules\n const enabledModules = registry.getEnabled(config);\n\n if (enabledModules.length === 0) {\n console.log('No modules enabled.');\n return [];\n }\n\n const results: CleanupResult[] = [];\n\n for (const module of enabledModules) {\n console.log(`\\n[${module.name}] Checking for stale entries...`);\n \n const result = await cleanupModuleIndex(rootDir, module.id, config, verbose);\n results.push(result);\n \n console.log(`[${module.name}] Removed ${result.removed} stale entries, kept ${result.kept} valid entries`);\n }\n\n return results;\n}\n\n/**\n * Clean up stale index entries for a specific module\n */\nasync function cleanupModuleIndex(\n rootDir: string,\n moduleId: string,\n config: Config,\n verbose: boolean\n): Promise<CleanupResult> {\n const result: CleanupResult = {\n moduleId,\n removed: 0,\n kept: 0,\n };\n\n // Load manifest\n const manifest = await loadModuleManifest(rootDir, moduleId, config);\n const indexPath = getModuleIndexPath(rootDir, moduleId, config);\n \n const filesToRemove: string[] = [];\n const updatedFiles: ModuleManifest['files'] = {};\n\n // Check each indexed file\n for (const [filepath, entry] of Object.entries(manifest.files)) {\n const fullPath = path.join(rootDir, filepath);\n \n try {\n await fs.access(fullPath);\n // File exists, keep it\n updatedFiles[filepath] = entry;\n result.kept++;\n } catch {\n // File doesn't exist, mark for removal\n filesToRemove.push(filepath);\n result.removed++;\n \n if (verbose) {\n console.log(` Removing stale entry: ${filepath}`);\n }\n }\n }\n\n // Remove stale index files\n for (const filepath of filesToRemove) {\n const indexFilePath = path.join(indexPath, filepath.replace(/\\.[^.]+$/, '.json'));\n try {\n await fs.unlink(indexFilePath);\n } catch {\n // Index file may not exist, that's okay\n }\n }\n\n // Update manifest with only valid files\n manifest.files = updatedFiles;\n manifest.lastUpdated = new Date().toISOString();\n await writeModuleManifest(rootDir, moduleId, manifest, config);\n\n // Clean up empty directories in the index\n await cleanupEmptyDirectories(indexPath);\n\n return result;\n}\n\n/**\n * Recursively remove empty directories\n */\nasync function cleanupEmptyDirectories(dir: string): Promise<boolean> {\n try {\n const entries = await fs.readdir(dir, { withFileTypes: true });\n \n // Process subdirectories first\n for (const entry of entries) {\n if (entry.isDirectory()) {\n const subDir = path.join(dir, entry.name);\n await cleanupEmptyDirectories(subDir);\n }\n }\n \n // Check if directory is now empty (re-read after potential subdirectory removal)\n const remainingEntries = await fs.readdir(dir);\n \n // Don't remove the root index directory or manifest files\n if (remainingEntries.length === 0) {\n await fs.rmdir(dir);\n return true;\n }\n \n return false;\n } catch {\n return false;\n }\n}\n",
15
+ "/**\n * File watcher for incremental indexing\n * \n * Best practices implemented:\n * - Debouncing: Batches rapid file changes (e.g., IDE saves, git operations)\n * - Queuing: Prevents concurrent index operations\n * - Efficient filtering: Only watches relevant file types\n * - Graceful shutdown: Proper cleanup on SIGINT/SIGTERM\n * - Error recovery: Continues watching after index errors\n */\n\nimport { watch, type FSWatcher } from 'chokidar';\nimport * as path from 'path';\nimport { loadConfig } from '../utils/config';\nimport type { Config } from '../domain/entities';\nimport { indexDirectory, cleanupIndex, type IndexOptions, type IndexResult } from './index';\n\n/** Default debounce delay in milliseconds */\nconst DEFAULT_DEBOUNCE_MS = 300;\n\n/** Maximum files to batch before forcing an index */\nconst MAX_BATCH_SIZE = 100;\n\nexport interface WatchOptions extends IndexOptions {\n /** Debounce delay in milliseconds (default: 300) */\n debounceMs?: number;\n /** Callback when indexing starts */\n onIndexStart?: (files: string[]) => void;\n /** Callback when indexing completes */\n onIndexComplete?: (results: IndexResult[]) => void;\n /** Callback when a file change is detected */\n onFileChange?: (event: 'add' | 'change' | 'unlink', filepath: string) => void;\n /** Callback for errors */\n onError?: (error: Error) => void;\n}\n\nexport interface FileWatcher {\n /** Stop watching and clean up */\n stop: () => Promise<void>;\n /** Whether the watcher is currently running */\n isRunning: () => boolean;\n}\n\n/**\n * Start watching a directory for file changes and index incrementally\n */\nexport async function watchDirectory(\n rootDir: string,\n options: WatchOptions = {}\n): Promise<FileWatcher> {\n const {\n debounceMs = DEFAULT_DEBOUNCE_MS,\n verbose = false,\n model,\n onIndexStart,\n onIndexComplete,\n onFileChange,\n onError,\n } = options;\n\n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n // Load config\n const config = await loadConfig(rootDir);\n \n // Build glob patterns for watched files\n const watchPatterns = config.extensions.map(ext => `**/*${ext}`);\n \n // Build ignore patterns\n const ignorePatterns = [\n ...config.ignorePaths.map(p => `**/${p}/**`),\n `**/${config.indexDir}/**`, // Always ignore the index directory\n ];\n\n // State management\n let isRunning = true;\n let isIndexing = false;\n let pendingChanges = new Map<string, 'add' | 'change' | 'unlink'>();\n let debounceTimer: ReturnType<typeof setTimeout> | null = null;\n let watcher: FSWatcher | null = null;\n\n /**\n * Process pending file changes\n */\n async function processPendingChanges(): Promise<void> {\n if (!isRunning || isIndexing || pendingChanges.size === 0) {\n return;\n }\n\n isIndexing = true;\n const changes = new Map(pendingChanges);\n pendingChanges.clear();\n\n try {\n // Separate additions/changes from deletions\n const filesToIndex: string[] = [];\n const filesToDelete: string[] = [];\n\n for (const [filepath, event] of changes) {\n if (event === 'unlink') {\n filesToDelete.push(filepath);\n } else {\n filesToIndex.push(filepath);\n }\n }\n\n // Handle deletions via cleanup\n if (filesToDelete.length > 0) {\n if (verbose) {\n console.log(`\\n[Watch] Cleaning up ${filesToDelete.length} deleted file(s)...`);\n }\n await cleanupIndex(rootDir, { verbose: false });\n }\n\n // Handle additions/changes via incremental index\n if (filesToIndex.length > 0) {\n if (onIndexStart) {\n onIndexStart(filesToIndex);\n }\n\n if (verbose) {\n console.log(`\\n[Watch] Indexing ${filesToIndex.length} changed file(s)...`);\n }\n\n const results = await indexDirectory(rootDir, {\n model,\n verbose: false, // Keep output clean in watch mode\n });\n\n if (onIndexComplete) {\n onIndexComplete(results);\n }\n\n // Print summary\n for (const result of results) {\n if (result.indexed > 0 || result.errors > 0) {\n console.log(`[Watch] ${result.moduleId}: ${result.indexed} indexed, ${result.errors} errors`);\n }\n }\n }\n } catch (error) {\n const err = error instanceof Error ? error : new Error(String(error));\n console.error('[Watch] Error during indexing:', err.message);\n if (onError) {\n onError(err);\n }\n } finally {\n isIndexing = false;\n\n // Process any changes that came in while we were indexing\n if (pendingChanges.size > 0) {\n scheduleProcessing();\n }\n }\n }\n\n /**\n * Schedule processing of pending changes (with debounce)\n */\n function scheduleProcessing(): void {\n if (debounceTimer) {\n clearTimeout(debounceTimer);\n }\n\n // Force processing if batch is too large\n if (pendingChanges.size >= MAX_BATCH_SIZE) {\n processPendingChanges();\n return;\n }\n\n debounceTimer = setTimeout(() => {\n debounceTimer = null;\n processPendingChanges();\n }, debounceMs);\n }\n\n /**\n * Handle a file event\n */\n function handleFileEvent(event: 'add' | 'change' | 'unlink', filepath: string): void {\n if (!isRunning) return;\n\n // Convert to relative path\n const relativePath = path.relative(rootDir, filepath);\n\n // Skip if it's in an ignored directory (extra safety check)\n for (const ignorePath of config.ignorePaths) {\n if (relativePath.startsWith(ignorePath) || relativePath.includes(`/${ignorePath}/`)) {\n return;\n }\n }\n\n if (onFileChange) {\n onFileChange(event, relativePath);\n }\n\n if (verbose) {\n const symbol = event === 'add' ? '+' : event === 'unlink' ? '-' : '~';\n console.log(`[Watch] ${symbol} ${relativePath}`);\n }\n\n // Update pending changes (later events override earlier ones for same file)\n pendingChanges.set(relativePath, event);\n scheduleProcessing();\n }\n\n // Create the watcher\n watcher = watch(watchPatterns, {\n cwd: rootDir,\n ignored: ignorePatterns,\n persistent: true,\n ignoreInitial: true, // Don't trigger events for existing files\n awaitWriteFinish: {\n stabilityThreshold: 100, // Wait for file to be stable\n pollInterval: 50,\n },\n // Performance optimizations\n usePolling: false, // Use native fs events when possible\n atomic: true, // Handle atomic writes (common in editors)\n });\n\n // Set up event handlers\n watcher.on('add', (filepath) => handleFileEvent('add', path.join(rootDir, filepath)));\n watcher.on('change', (filepath) => handleFileEvent('change', path.join(rootDir, filepath)));\n watcher.on('unlink', (filepath) => handleFileEvent('unlink', path.join(rootDir, filepath)));\n\n watcher.on('error', (error: unknown) => {\n const err = error instanceof Error ? error : new Error(String(error));\n console.error('[Watch] Watcher error:', err);\n if (onError) {\n onError(err);\n }\n });\n\n // Wait for watcher to be ready\n await new Promise<void>((resolve) => {\n watcher!.on('ready', () => {\n resolve();\n });\n });\n\n // Return control interface\n return {\n stop: async () => {\n isRunning = false;\n \n if (debounceTimer) {\n clearTimeout(debounceTimer);\n debounceTimer = null;\n }\n \n if (watcher) {\n await watcher.close();\n watcher = null;\n }\n },\n isRunning: () => isRunning,\n };\n}\n\n",
16
+ "// Main indexer - coordinates modules for indexing files\nimport { glob } from 'glob';\nimport * as fs from 'fs/promises';\nimport * as path from 'path';\nimport {\n Config,\n IndexContext,\n IndexModule,\n ModuleManifest,\n GlobalManifest,\n FileIndex,\n} from '../types';\nimport {\n DEFAULT_CONFIG,\n loadConfig,\n getModuleIndexPath,\n getModuleManifestPath,\n getGlobalManifestPath,\n getModuleConfig,\n} from '../utils/config';\nimport { registry, registerBuiltInModules } from '../modules/registry';\nimport { EmbeddingModelName } from '../utils/embeddings';\n\nexport interface IndexResult {\n moduleId: string;\n indexed: number;\n skipped: number;\n errors: number;\n}\n\nexport interface IndexOptions {\n /** Override the embedding model (semantic module) */\n model?: EmbeddingModelName;\n /** Show detailed progress */\n verbose?: boolean;\n}\n\nexport interface CleanupResult {\n moduleId: string;\n /** Number of stale entries removed */\n removed: number;\n /** Number of valid entries kept */\n kept: number;\n}\n\nexport interface IndexStatus {\n /** Whether an index exists */\n exists: boolean;\n /** Root directory path */\n rootDir: string;\n /** Index directory path */\n indexDir: string;\n /** Last time the index was updated */\n lastUpdated?: string;\n /** Active modules and their file counts */\n modules: Array<{\n id: string;\n fileCount: number;\n lastUpdated: string;\n }>;\n /** Total number of indexed files */\n totalFiles: number;\n}\n\n/**\n * Index a directory using all enabled modules\n */\nexport async function indexDirectory(rootDir: string, options: IndexOptions = {}): Promise<IndexResult[]> {\n const verbose = options.verbose ?? false;\n \n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n console.log(`Indexing directory: ${rootDir}`);\n\n // Load config\n const config = await loadConfig(rootDir);\n\n // Register built-in modules\n await registerBuiltInModules();\n\n // Get enabled modules\n const enabledModules = registry.getEnabled(config);\n\n if (enabledModules.length === 0) {\n console.log('No modules enabled. Check your configuration.');\n return [];\n }\n\n console.log(`Enabled modules: ${enabledModules.map((m) => m.id).join(', ')}`);\n\n // Get all files matching extensions\n const files = await findFiles(rootDir, config);\n console.log(`Found ${files.length} files to index`);\n\n // Index with each module\n const results: IndexResult[] = [];\n\n for (const module of enabledModules) {\n console.log(`\\n[${module.name}] Starting indexing...`);\n\n // Initialize module if needed\n const moduleConfig = getModuleConfig(config, module.id);\n if (module.initialize && moduleConfig) {\n // Apply CLI overrides to module config\n const configWithOverrides = { ...moduleConfig };\n if (options.model && module.id === 'semantic') {\n configWithOverrides.options = {\n ...configWithOverrides.options,\n embeddingModel: options.model,\n };\n }\n await module.initialize(configWithOverrides);\n }\n\n const result = await indexWithModule(rootDir, files, module, config, verbose);\n results.push(result);\n\n // Call finalize to build secondary indexes (Tier 1, BM25, etc.)\n if (module.finalize) {\n console.log(`[${module.name}] Building secondary indexes...`);\n const ctx: IndexContext = {\n rootDir,\n config,\n readFile: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n return fs.readFile(fullPath, 'utf-8');\n },\n getFileStats: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n const stats = await fs.stat(fullPath);\n return { lastModified: stats.mtime.toISOString() };\n },\n };\n await module.finalize(ctx);\n }\n\n console.log(`[${module.name}] Complete: ${result.indexed} indexed, ${result.skipped} skipped, ${result.errors} errors`);\n }\n\n // Update global manifest\n await updateGlobalManifest(rootDir, enabledModules, config);\n\n return results;\n}\n\n/**\n * Index files with a specific module\n */\nasync function indexWithModule(\n rootDir: string,\n files: string[],\n module: IndexModule,\n config: Config,\n verbose: boolean\n): Promise<IndexResult> {\n const result: IndexResult = {\n moduleId: module.id,\n indexed: 0,\n skipped: 0,\n errors: 0,\n };\n\n // Load existing manifest for this module\n const manifest = await loadModuleManifest(rootDir, module.id, config);\n\n // Create index context\n const ctx: IndexContext = {\n rootDir,\n config,\n readFile: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n return fs.readFile(fullPath, 'utf-8');\n },\n getFileStats: async (filepath: string) => {\n const fullPath = path.isAbsolute(filepath) ? filepath : path.join(rootDir, filepath);\n const stats = await fs.stat(fullPath);\n return { lastModified: stats.mtime.toISOString() };\n },\n };\n\n // Process each file\n for (const filepath of files) {\n const relativePath = path.relative(rootDir, filepath);\n \n try {\n const stats = await fs.stat(filepath);\n const lastModified = stats.mtime.toISOString();\n\n // Check if file needs re-indexing\n const existingEntry = manifest.files[relativePath];\n if (existingEntry && existingEntry.lastModified === lastModified) {\n if (verbose) {\n console.log(` Skipped ${relativePath} (unchanged)`);\n }\n result.skipped++;\n continue;\n }\n\n // Read and index file\n const content = await fs.readFile(filepath, 'utf-8');\n \n if (verbose) {\n console.log(` Processing ${relativePath}...`);\n }\n const fileIndex = await module.indexFile(relativePath, content, ctx);\n\n if (!fileIndex) {\n if (verbose) {\n console.log(` Skipped ${relativePath} (no chunks)`);\n }\n result.skipped++;\n continue;\n }\n\n // Write index file\n await writeFileIndex(rootDir, module.id, relativePath, fileIndex, config);\n\n // Update manifest\n manifest.files[relativePath] = {\n lastModified,\n chunkCount: fileIndex.chunks.length,\n };\n\n result.indexed++;\n } catch (error) {\n console.error(` Error indexing ${relativePath}:`, error);\n result.errors++;\n }\n }\n\n // Update manifest\n manifest.lastUpdated = new Date().toISOString();\n await writeModuleManifest(rootDir, module.id, manifest, config);\n\n return result;\n}\n\nasync function findFiles(rootDir: string, config: Config): Promise<string[]> {\n const patterns = config.extensions.map((ext) => `**/*${ext}`);\n const ignorePatterns = config.ignorePaths.map((p) => `**/${p}/**`);\n\n const files: string[] = [];\n for (const pattern of patterns) {\n const matches = await glob(pattern, {\n cwd: rootDir,\n absolute: true,\n ignore: ignorePatterns,\n });\n files.push(...matches);\n }\n\n return [...new Set(files)]; // Remove duplicates\n}\n\nasync function loadModuleManifest(\n rootDir: string,\n moduleId: string,\n config: Config\n): Promise<ModuleManifest> {\n const manifestPath = getModuleManifestPath(rootDir, moduleId, config);\n\n try {\n const content = await fs.readFile(manifestPath, 'utf-8');\n return JSON.parse(content);\n } catch {\n return {\n moduleId,\n version: '1.0.0',\n lastUpdated: new Date().toISOString(),\n files: {},\n };\n }\n}\n\nasync function writeModuleManifest(\n rootDir: string,\n moduleId: string,\n manifest: ModuleManifest,\n config: Config\n): Promise<void> {\n const manifestPath = getModuleManifestPath(rootDir, moduleId, config);\n await fs.mkdir(path.dirname(manifestPath), { recursive: true });\n await fs.writeFile(manifestPath, JSON.stringify(manifest, null, 2));\n}\n\nasync function writeFileIndex(\n rootDir: string,\n moduleId: string,\n filepath: string,\n fileIndex: FileIndex,\n config: Config\n): Promise<void> {\n const indexPath = getModuleIndexPath(rootDir, moduleId, config);\n const indexFilePath = path.join(indexPath, filepath.replace(/\\.[^.]+$/, '.json'));\n\n await fs.mkdir(path.dirname(indexFilePath), { recursive: true });\n await fs.writeFile(indexFilePath, JSON.stringify(fileIndex, null, 2));\n}\n\nasync function updateGlobalManifest(\n rootDir: string,\n modules: IndexModule[],\n config: Config\n): Promise<void> {\n const manifestPath = getGlobalManifestPath(rootDir, config);\n\n const manifest: GlobalManifest = {\n version: config.version,\n lastUpdated: new Date().toISOString(),\n modules: modules.map((m) => m.id),\n };\n\n await fs.mkdir(path.dirname(manifestPath), { recursive: true });\n await fs.writeFile(manifestPath, JSON.stringify(manifest, null, 2));\n}\n\n/**\n * Clean up stale index entries for files that no longer exist\n * @param rootDir - Root directory of the project\n * @param options - Cleanup options\n * @returns Array of cleanup results per module\n */\nexport async function cleanupIndex(\n rootDir: string, \n options: { verbose?: boolean } = {}\n): Promise<CleanupResult[]> {\n const verbose = options.verbose ?? false;\n \n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n console.log(`Cleaning up index in: ${rootDir}`);\n\n // Load config\n const config = await loadConfig(rootDir);\n\n // Register built-in modules\n await registerBuiltInModules();\n\n // Get enabled modules\n const enabledModules = registry.getEnabled(config);\n\n if (enabledModules.length === 0) {\n console.log('No modules enabled.');\n return [];\n }\n\n const results: CleanupResult[] = [];\n\n for (const module of enabledModules) {\n console.log(`\\n[${module.name}] Checking for stale entries...`);\n \n const result = await cleanupModuleIndex(rootDir, module.id, config, verbose);\n results.push(result);\n \n console.log(`[${module.name}] Removed ${result.removed} stale entries, kept ${result.kept} valid entries`);\n }\n\n return results;\n}\n\n/**\n * Clean up stale index entries for a specific module\n */\nasync function cleanupModuleIndex(\n rootDir: string,\n moduleId: string,\n config: Config,\n verbose: boolean\n): Promise<CleanupResult> {\n const result: CleanupResult = {\n moduleId,\n removed: 0,\n kept: 0,\n };\n\n // Load manifest\n const manifest = await loadModuleManifest(rootDir, moduleId, config);\n const indexPath = getModuleIndexPath(rootDir, moduleId, config);\n \n const filesToRemove: string[] = [];\n const updatedFiles: ModuleManifest['files'] = {};\n\n // Check each indexed file\n for (const [filepath, entry] of Object.entries(manifest.files)) {\n const fullPath = path.join(rootDir, filepath);\n \n try {\n await fs.access(fullPath);\n // File exists, keep it\n updatedFiles[filepath] = entry;\n result.kept++;\n } catch {\n // File doesn't exist, mark for removal\n filesToRemove.push(filepath);\n result.removed++;\n \n if (verbose) {\n console.log(` Removing stale entry: ${filepath}`);\n }\n }\n }\n\n // Remove stale index files\n for (const filepath of filesToRemove) {\n const indexFilePath = path.join(indexPath, filepath.replace(/\\.[^.]+$/, '.json'));\n try {\n await fs.unlink(indexFilePath);\n } catch {\n // Index file may not exist, that's okay\n }\n }\n\n // Update manifest with only valid files\n manifest.files = updatedFiles;\n manifest.lastUpdated = new Date().toISOString();\n await writeModuleManifest(rootDir, moduleId, manifest, config);\n\n // Clean up empty directories in the index\n await cleanupEmptyDirectories(indexPath);\n\n return result;\n}\n\n/**\n * Recursively remove empty directories\n */\nasync function cleanupEmptyDirectories(dir: string): Promise<boolean> {\n try {\n const entries = await fs.readdir(dir, { withFileTypes: true });\n \n // Process subdirectories first\n for (const entry of entries) {\n if (entry.isDirectory()) {\n const subDir = path.join(dir, entry.name);\n await cleanupEmptyDirectories(subDir);\n }\n }\n \n // Check if directory is now empty (re-read after potential subdirectory removal)\n const remainingEntries = await fs.readdir(dir);\n \n // Don't remove the root index directory or manifest files\n if (remainingEntries.length === 0) {\n await fs.rmdir(dir);\n return true;\n }\n \n return false;\n } catch {\n return false;\n }\n}\n\n/**\n * Get the current status of the index\n * @param rootDir - Root directory of the project\n * @returns Index status information\n */\nexport async function getIndexStatus(rootDir: string): Promise<IndexStatus> {\n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n \n // Load config\n const config = await loadConfig(rootDir);\n const indexDir = path.join(rootDir, config.indexDir);\n \n const status: IndexStatus = {\n exists: false,\n rootDir,\n indexDir,\n modules: [],\n totalFiles: 0,\n };\n \n // Check if index directory exists\n try {\n await fs.access(indexDir);\n } catch {\n return status;\n }\n \n // Try to load global manifest\n try {\n const globalManifestPath = getGlobalManifestPath(rootDir, config);\n const content = await fs.readFile(globalManifestPath, 'utf-8');\n const globalManifest: GlobalManifest = JSON.parse(content);\n \n status.exists = true;\n status.lastUpdated = globalManifest.lastUpdated;\n \n // Load each module's manifest\n for (const moduleId of globalManifest.modules) {\n try {\n const manifest = await loadModuleManifest(rootDir, moduleId, config);\n const fileCount = Object.keys(manifest.files).length;\n \n status.modules.push({\n id: moduleId,\n fileCount,\n lastUpdated: manifest.lastUpdated,\n });\n \n status.totalFiles += fileCount;\n } catch {\n // Module manifest doesn't exist or is corrupt\n }\n }\n } catch {\n // Global manifest doesn't exist - check if there's any index data\n try {\n const entries = await fs.readdir(path.join(indexDir, 'index'));\n if (entries.length > 0) {\n status.exists = true;\n // Try to load manifests for known modules\n for (const entry of entries) {\n try {\n const manifest = await loadModuleManifest(rootDir, entry, config);\n const fileCount = Object.keys(manifest.files).length;\n \n status.modules.push({\n id: entry,\n fileCount,\n lastUpdated: manifest.lastUpdated,\n });\n \n status.totalFiles += fileCount;\n } catch {\n // Skip\n }\n }\n }\n } catch {\n // No index directory\n }\n }\n \n return status;\n}\n\n// Re-export watcher\nexport { watchDirectory, type WatchOptions, type FileWatcher } from './watcher';\n",
16
17
  "// Search module - queries across all enabled modules\nimport * as fs from 'fs/promises';\nimport * as path from 'path';\nimport {\n Config,\n SearchContext,\n SearchOptions,\n SearchResult,\n FileIndex,\n IndexModule,\n GlobalManifest,\n} from '../types';\nimport {\n loadConfig,\n getModuleIndexPath,\n getGlobalManifestPath,\n getModuleConfig,\n} from '../utils/config';\nimport { registry, registerBuiltInModules } from '../modules/registry';\n\n/**\n * Search across all enabled modules\n */\nexport async function search(\n rootDir: string,\n query: string,\n options: SearchOptions = {}\n): Promise<SearchResult[]> {\n // Ensure absolute path\n rootDir = path.resolve(rootDir);\n\n console.log(`Searching for: \"${query}\"`);\n\n // Load config\n const config = await loadConfig(rootDir);\n\n // Register built-in modules\n await registerBuiltInModules();\n\n // Check which modules have indexes\n const globalManifest = await loadGlobalManifest(rootDir, config);\n \n if (!globalManifest || globalManifest.modules.length === 0) {\n console.log('No index found. Run \"bun run index\" first.');\n return [];\n }\n\n // Get modules that are both enabled and have indexes\n const modulesToSearch: IndexModule[] = [];\n \n for (const moduleId of globalManifest.modules) {\n const module = registry.get(moduleId);\n const moduleConfig = getModuleConfig(config, moduleId);\n \n if (module && moduleConfig?.enabled) {\n // Initialize module if needed\n if (module.initialize) {\n await module.initialize(moduleConfig);\n }\n modulesToSearch.push(module);\n }\n }\n\n if (modulesToSearch.length === 0) {\n console.log('No enabled modules with indexes found.');\n return [];\n }\n\n // Search with each module and aggregate results\n const allResults: SearchResult[] = [];\n\n for (const module of modulesToSearch) {\n const ctx = createSearchContext(rootDir, module.id, config);\n const moduleResults = await module.search(query, ctx, options);\n allResults.push(...moduleResults);\n }\n\n // Sort all results by score\n allResults.sort((a, b) => b.score - a.score);\n\n // Return top K\n const topK = options.topK ?? 10;\n return allResults.slice(0, topK);\n}\n\n/**\n * Create a search context for a specific module\n */\nfunction createSearchContext(\n rootDir: string,\n moduleId: string,\n config: Config\n): SearchContext {\n const indexPath = getModuleIndexPath(rootDir, moduleId, config);\n\n return {\n rootDir,\n config,\n \n loadFileIndex: async (filepath: string): Promise<FileIndex | null> => {\n // filepath may or may not have an extension\n // If it has an extension, replace it with .json; otherwise append .json\n const hasExtension = /\\.[^./]+$/.test(filepath);\n const indexFilePath = hasExtension\n ? path.join(indexPath, filepath.replace(/\\.[^.]+$/, '.json'))\n : path.join(indexPath, filepath + '.json');\n \n try {\n const content = await fs.readFile(indexFilePath, 'utf-8');\n return JSON.parse(content);\n } catch {\n return null;\n }\n },\n \n listIndexedFiles: async (): Promise<string[]> => {\n const files: string[] = [];\n await traverseDirectory(indexPath, files, indexPath);\n \n // Convert index file paths back to source file paths\n return files\n .filter(f => f.endsWith('.json') && !f.endsWith('manifest.json'))\n .map(f => {\n const relative = path.relative(indexPath, f);\n // Convert .json back to original extension (we'll handle this generically)\n return relative.replace(/\\.json$/, '');\n });\n },\n };\n}\n\nasync function traverseDirectory(dir: string, files: string[], basePath: string): Promise<void> {\n try {\n const entries = await fs.readdir(dir, { withFileTypes: true });\n\n for (const entry of entries) {\n const fullPath = path.join(dir, entry.name);\n\n if (entry.isDirectory()) {\n await traverseDirectory(fullPath, files, basePath);\n } else if (entry.isFile()) {\n files.push(fullPath);\n }\n }\n } catch {\n // Directory doesn't exist\n }\n}\n\nasync function loadGlobalManifest(rootDir: string, config: Config): Promise<GlobalManifest | null> {\n const manifestPath = getGlobalManifestPath(rootDir, config);\n\n try {\n const content = await fs.readFile(manifestPath, 'utf-8');\n return JSON.parse(content);\n } catch {\n return null;\n }\n}\n\n/**\n * Format search results for display\n * @param results - Array of search results to format\n * @returns Formatted string for console output\n */\nexport function formatSearchResults(results: SearchResult[]): string {\n if (results.length === 0) {\n return 'No results found.';\n }\n\n let output = `Found ${results.length} results:\\n\\n`;\n\n for (let i = 0; i < results.length; i++) {\n const result = results[i];\n const { chunk } = result;\n \n // Format location with optional name\n const location = `${result.filepath}:${chunk.startLine}-${chunk.endLine}`;\n const nameInfo = chunk.name ? ` (${chunk.name})` : '';\n \n output += `${i + 1}. ${location}${nameInfo}\\n`;\n output += ` Score: ${(result.score * 100).toFixed(1)}% | Type: ${chunk.type}`;\n \n // Add export indicator\n if (chunk.isExported) {\n output += ' | exported';\n }\n output += '\\n';\n\n // Show preview (first 3 lines)\n const lines = chunk.content.split('\\n').slice(0, 3);\n for (const line of lines) {\n const trimmedLine = line.substring(0, 80);\n output += ` ${trimmedLine}${line.length > 80 ? '...' : ''}\\n`;\n }\n\n output += '\\n';\n }\n\n return output;\n}\n",
17
- "// Main CLI entry point for raggrep\n\nimport { EMBEDDING_MODELS, getCacheDir, type EmbeddingModelName } from '../utils/embeddings';\n\nconst args = process.argv.slice(2);\nconst command = args[0];\n\n/**\n * Parsed CLI flags from command line arguments\n */\ninterface ParsedFlags {\n /** Embedding model to use */\n model?: EmbeddingModelName;\n /** Number of results to return */\n topK?: number;\n /** Minimum similarity score threshold (0-1) */\n minScore?: number;\n /** File extension filter (e.g., 'ts', 'tsx') */\n fileType?: string;\n /** Show help message */\n help: boolean;\n /** Show detailed progress */\n verbose: boolean;\n /** Remaining positional arguments */\n remaining: string[];\n}\n\n/**\n * Parse CLI flags from command line arguments\n * @param args - Array of command line arguments (excluding command name)\n * @returns Parsed flags object\n */\nfunction parseFlags(args: string[]): ParsedFlags {\n const flags: ParsedFlags = {\n help: false,\n verbose: false,\n remaining: [],\n };\n \n for (let i = 0; i < args.length; i++) {\n const arg = args[i];\n \n if (arg === '--help' || arg === '-h') {\n flags.help = true;\n } else if (arg === '--verbose' || arg === '-v') {\n flags.verbose = true;\n } else if (arg === '--model' || arg === '-m') {\n const modelName = args[++i];\n if (modelName && modelName in EMBEDDING_MODELS) {\n flags.model = modelName as EmbeddingModelName;\n } else {\n console.error(`Invalid model: ${modelName}`);\n console.error(`Available models: ${Object.keys(EMBEDDING_MODELS).join(', ')}`);\n process.exit(1);\n }\n } else if (arg === '--top' || arg === '-k') {\n const k = parseInt(args[++i], 10);\n if (!isNaN(k) && k > 0) {\n flags.topK = k;\n }\n } else if (arg === '--min-score' || arg === '-s') {\n const score = parseFloat(args[++i]);\n if (!isNaN(score) && score >= 0 && score <= 1) {\n flags.minScore = score;\n } else {\n console.error(`Invalid min-score: ${args[i]}. Must be a number between 0 and 1.`);\n process.exit(1);\n }\n } else if (arg === '--type' || arg === '-t') {\n const type = args[++i];\n if (type) {\n // Normalize: remove leading dot if present\n flags.fileType = type.startsWith('.') ? type.slice(1) : type;\n } else {\n console.error('--type requires a file extension (e.g., ts, tsx, js)');\n process.exit(1);\n }\n } else if (!arg.startsWith('-')) {\n flags.remaining.push(arg);\n }\n }\n \n return flags;\n}\n\nasync function main() {\n const flags = parseFlags(args.slice(1)); // Skip the command itself\n \n switch (command) {\n case 'index': {\n if (flags.help) {\n const models = Object.keys(EMBEDDING_MODELS).join(', ');\n console.log(`\nraggrep index - Index the current directory for semantic search\n\nUsage:\n raggrep index [options]\n\nOptions:\n -m, --model <name> Embedding model to use (default: all-MiniLM-L6-v2)\n -v, --verbose Show detailed progress\n -h, --help Show this help message\n\nAvailable Models:\n ${models}\n\nModel Cache: ${getCacheDir()}\n\nExamples:\n raggrep index\n raggrep index --model bge-small-en-v1.5\n raggrep index --verbose\n`);\n process.exit(0);\n }\n\n const { indexDirectory } = await import('../indexer');\n console.log('RAGgrep Indexer');\n console.log('================\\n');\n try {\n const results = await indexDirectory(process.cwd(), { \n model: flags.model,\n verbose: flags.verbose,\n });\n console.log('\\n================');\n console.log('Summary:');\n for (const result of results) {\n console.log(` ${result.moduleId}: ${result.indexed} indexed, ${result.skipped} skipped, ${result.errors} errors`);\n }\n } catch (error) {\n console.error('Error during indexing:', error);\n process.exit(1);\n }\n break;\n }\n\n case 'query': {\n if (flags.help) {\n console.log(`\nraggrep query - Search the indexed codebase\n\nUsage:\n raggrep query <search query> [options]\n\nOptions:\n -k, --top <n> Number of results to return (default: 10)\n -s, --min-score <n> Minimum similarity score 0-1 (default: 0.15)\n -t, --type <ext> Filter by file extension (e.g., ts, tsx, js)\n -h, --help Show this help message\n\nExamples:\n raggrep query \"user authentication\"\n raggrep query \"handle errors\" --top 5\n raggrep query \"database\" --min-score 0.1\n raggrep query \"interface\" --type ts\n`);\n process.exit(0);\n }\n\n const { search, formatSearchResults } = await import('../search');\n const query = flags.remaining[0];\n \n if (!query) {\n console.error('Usage: raggrep query <search query>');\n console.error('Run \"raggrep query --help\" for more information.');\n process.exit(1);\n }\n \n console.log('RAGgrep Search');\n console.log('==============\\n');\n try {\n // Build file patterns if type filter specified\n const filePatterns = flags.fileType ? [`*.${flags.fileType}`] : undefined;\n \n const results = await search(process.cwd(), query, { \n topK: flags.topK ?? 10,\n minScore: flags.minScore,\n filePatterns,\n });\n console.log(formatSearchResults(results));\n } catch (error) {\n console.error('Error during search:', error);\n process.exit(1);\n }\n break;\n }\n\n case 'cleanup': {\n if (flags.help) {\n console.log(`\nraggrep cleanup - Remove stale index entries for deleted files\n\nUsage:\n raggrep cleanup [options]\n\nOptions:\n -v, --verbose Show detailed progress\n -h, --help Show this help message\n\nDescription:\n Scans the index and removes entries for files that no longer exist.\n Run this command after deleting files to clean up the index.\n\nExamples:\n raggrep cleanup\n raggrep cleanup --verbose\n`);\n process.exit(0);\n }\n\n const { cleanupIndex } = await import('../indexer');\n console.log('RAGgrep Cleanup');\n console.log('===============\\n');\n try {\n const results = await cleanupIndex(process.cwd(), { \n verbose: flags.verbose,\n });\n console.log('\\n===============');\n console.log('Summary:');\n for (const result of results) {\n console.log(` ${result.moduleId}: ${result.removed} removed, ${result.kept} kept`);\n }\n } catch (error) {\n console.error('Error during cleanup:', error);\n process.exit(1);\n }\n break;\n }\n\n default:\n console.log(`\nraggrep - Local filesystem-based RAG system for codebases\n\nUsage:\n raggrep <command> [options]\n\nCommands:\n index Index the current directory\n query Search the indexed codebase\n cleanup Remove stale index entries for deleted files\n\nOptions:\n -h, --help Show help for a command\n\nExamples:\n raggrep index\n raggrep index --model bge-small-en-v1.5\n raggrep query \"user login\"\n raggrep query \"handle errors\" --top 5\n raggrep cleanup\n\nRun 'raggrep <command> --help' for more information.\n`);\n if (command && command !== '--help' && command !== '-h') {\n console.error(`Unknown command: ${command}`);\n process.exit(1);\n }\n }\n}\n\nmain();\n"
18
+ "// Main CLI entry point for raggrep\n\nimport { EMBEDDING_MODELS, getCacheDir, type EmbeddingModelName } from '../utils/embeddings';\nimport { createRequire } from 'module';\n\n// Read version from package.json\nconst require = createRequire(import.meta.url);\nconst pkg = require('../../package.json');\nconst VERSION = pkg.version;\n\nconst args = process.argv.slice(2);\nconst command = args[0];\n\n// Handle --version / -v at top level (before any command)\nif (command === '--version' || command === '-v') {\n console.log(`raggrep v${VERSION}`);\n process.exit(0);\n}\n\n/**\n * Format a date as a human-readable \"time ago\" string\n */\nfunction formatTimeAgo(date: Date): string {\n const now = new Date();\n const diffMs = now.getTime() - date.getTime();\n const diffSecs = Math.floor(diffMs / 1000);\n const diffMins = Math.floor(diffSecs / 60);\n const diffHours = Math.floor(diffMins / 60);\n const diffDays = Math.floor(diffHours / 24);\n\n if (diffSecs < 60) return 'just now';\n if (diffMins < 60) return `${diffMins}m ago`;\n if (diffHours < 24) return `${diffHours}h ago`;\n if (diffDays < 7) return `${diffDays}d ago`;\n \n // For older dates, show the actual date\n return date.toLocaleDateString();\n}\n\n/**\n * Parsed CLI flags from command line arguments\n */\ninterface ParsedFlags {\n /** Embedding model to use */\n model?: EmbeddingModelName;\n /** Number of results to return */\n topK?: number;\n /** Minimum similarity score threshold (0-1) */\n minScore?: number;\n /** File extension filter (e.g., 'ts', 'tsx') */\n fileType?: string;\n /** Show help message */\n help: boolean;\n /** Show detailed progress */\n verbose: boolean;\n /** Watch mode for continuous indexing */\n watch: boolean;\n /** Remaining positional arguments */\n remaining: string[];\n}\n\n/**\n * Parse CLI flags from command line arguments\n * @param args - Array of command line arguments (excluding command name)\n * @returns Parsed flags object\n */\nfunction parseFlags(args: string[]): ParsedFlags {\n const flags: ParsedFlags = {\n help: false,\n verbose: false,\n watch: false,\n remaining: [],\n };\n \n for (let i = 0; i < args.length; i++) {\n const arg = args[i];\n \n if (arg === '--help' || arg === '-h') {\n flags.help = true;\n } else if (arg === '--verbose' || arg === '-v') {\n flags.verbose = true;\n } else if (arg === '--watch' || arg === '-w') {\n flags.watch = true;\n } else if (arg === '--model' || arg === '-m') {\n const modelName = args[++i];\n if (modelName && modelName in EMBEDDING_MODELS) {\n flags.model = modelName as EmbeddingModelName;\n } else {\n console.error(`Invalid model: ${modelName}`);\n console.error(`Available models: ${Object.keys(EMBEDDING_MODELS).join(', ')}`);\n process.exit(1);\n }\n } else if (arg === '--top' || arg === '-k') {\n const k = parseInt(args[++i], 10);\n if (!isNaN(k) && k > 0) {\n flags.topK = k;\n }\n } else if (arg === '--min-score' || arg === '-s') {\n const score = parseFloat(args[++i]);\n if (!isNaN(score) && score >= 0 && score <= 1) {\n flags.minScore = score;\n } else {\n console.error(`Invalid min-score: ${args[i]}. Must be a number between 0 and 1.`);\n process.exit(1);\n }\n } else if (arg === '--type' || arg === '-t') {\n const type = args[++i];\n if (type) {\n // Normalize: remove leading dot if present\n flags.fileType = type.startsWith('.') ? type.slice(1) : type;\n } else {\n console.error('--type requires a file extension (e.g., ts, tsx, js)');\n process.exit(1);\n }\n } else if (!arg.startsWith('-')) {\n flags.remaining.push(arg);\n }\n }\n \n return flags;\n}\n\nasync function main() {\n const flags = parseFlags(args.slice(1)); // Skip the command itself\n \n switch (command) {\n case 'index': {\n if (flags.help) {\n const models = Object.keys(EMBEDDING_MODELS).join(', ');\n console.log(`\nraggrep index - Index the current directory for semantic search\n\nUsage:\n raggrep index [options]\n\nOptions:\n -w, --watch Watch for file changes and re-index automatically\n -m, --model <name> Embedding model to use (default: all-MiniLM-L6-v2)\n -v, --verbose Show detailed progress\n -h, --help Show this help message\n\nAvailable Models:\n ${models}\n\nModel Cache: ${getCacheDir()}\n\nExamples:\n raggrep index\n raggrep index --watch\n raggrep index --model bge-small-en-v1.5\n raggrep index --verbose\n`);\n process.exit(0);\n }\n\n const { indexDirectory, watchDirectory } = await import('../indexer');\n \n // Initial indexing\n console.log('RAGgrep Indexer');\n console.log('================\\n');\n try {\n const results = await indexDirectory(process.cwd(), { \n model: flags.model,\n verbose: flags.verbose,\n });\n console.log('\\n================');\n console.log('Summary:');\n for (const result of results) {\n console.log(` ${result.moduleId}: ${result.indexed} indexed, ${result.skipped} skipped, ${result.errors} errors`);\n }\n } catch (error) {\n console.error('Error during indexing:', error);\n process.exit(1);\n }\n\n // Watch mode\n if (flags.watch) {\n console.log('\\n┌─────────────────────────────────────────┐');\n console.log('│ Watching for changes... (Ctrl+C to stop) │');\n console.log('└─────────────────────────────────────────┘\\n');\n\n try {\n const watcher = await watchDirectory(process.cwd(), {\n model: flags.model,\n verbose: flags.verbose,\n onFileChange: (event, filepath) => {\n if (flags.verbose) {\n const symbol = event === 'add' ? '＋' : event === 'unlink' ? '－' : '～';\n console.log(` ${symbol} ${filepath}`);\n }\n },\n });\n\n // Handle graceful shutdown\n const shutdown = async () => {\n console.log('\\n\\nStopping watcher...');\n await watcher.stop();\n console.log('Done.');\n process.exit(0);\n };\n\n process.on('SIGINT', shutdown);\n process.on('SIGTERM', shutdown);\n\n // Keep the process running\n await new Promise(() => {}); // Never resolves\n } catch (error) {\n console.error('Error starting watcher:', error);\n process.exit(1);\n }\n }\n break;\n }\n\n case 'query': {\n if (flags.help) {\n console.log(`\nraggrep query - Search the indexed codebase\n\nUsage:\n raggrep query <search query> [options]\n\nOptions:\n -k, --top <n> Number of results to return (default: 10)\n -s, --min-score <n> Minimum similarity score 0-1 (default: 0.15)\n -t, --type <ext> Filter by file extension (e.g., ts, tsx, js)\n -h, --help Show this help message\n\nNote:\n If the current directory has not been indexed, raggrep will\n automatically index it before searching.\n\nExamples:\n raggrep query \"user authentication\"\n raggrep query \"handle errors\" --top 5\n raggrep query \"database\" --min-score 0.1\n raggrep query \"interface\" --type ts\n`);\n process.exit(0);\n }\n\n const { search, formatSearchResults } = await import('../search');\n const { getIndexStatus, indexDirectory } = await import('../indexer');\n const query = flags.remaining[0];\n \n if (!query) {\n console.error('Usage: raggrep query <search query>');\n console.error('Run \"raggrep query --help\" for more information.');\n process.exit(1);\n }\n \n try {\n // Check if index exists, if not, create it first\n const status = await getIndexStatus(process.cwd());\n \n if (!status.exists) {\n console.log('No index found. Indexing directory first...\\n');\n console.log('RAGgrep Indexer');\n console.log('================\\n');\n \n const indexResults = await indexDirectory(process.cwd(), { \n model: flags.model,\n verbose: false,\n });\n \n console.log('\\n================');\n console.log('Summary:');\n for (const result of indexResults) {\n console.log(` ${result.moduleId}: ${result.indexed} indexed, ${result.skipped} skipped, ${result.errors} errors`);\n }\n console.log('');\n }\n \n console.log('RAGgrep Search');\n console.log('==============\\n');\n \n // Build file patterns if type filter specified\n const filePatterns = flags.fileType ? [`*.${flags.fileType}`] : undefined;\n \n const results = await search(process.cwd(), query, { \n topK: flags.topK ?? 10,\n minScore: flags.minScore,\n filePatterns,\n });\n console.log(formatSearchResults(results));\n } catch (error) {\n console.error('Error during search:', error);\n process.exit(1);\n }\n break;\n }\n\n case 'cleanup': {\n if (flags.help) {\n console.log(`\nraggrep cleanup - Remove stale index entries for deleted files\n\nUsage:\n raggrep cleanup [options]\n\nOptions:\n -v, --verbose Show detailed progress\n -h, --help Show this help message\n\nDescription:\n Scans the index and removes entries for files that no longer exist.\n Run this command after deleting files to clean up the index.\n\nExamples:\n raggrep cleanup\n raggrep cleanup --verbose\n`);\n process.exit(0);\n }\n\n const { cleanupIndex } = await import('../indexer');\n console.log('RAGgrep Cleanup');\n console.log('===============\\n');\n try {\n const results = await cleanupIndex(process.cwd(), { \n verbose: flags.verbose,\n });\n console.log('\\n===============');\n console.log('Summary:');\n for (const result of results) {\n console.log(` ${result.moduleId}: ${result.removed} removed, ${result.kept} kept`);\n }\n } catch (error) {\n console.error('Error during cleanup:', error);\n process.exit(1);\n }\n break;\n }\n\n case 'status': {\n if (flags.help) {\n console.log(`\nraggrep status - Show the current state of the index\n\nUsage:\n raggrep status [options]\n\nOptions:\n -h, --help Show this help message\n\nDescription:\n Displays information about the index in the current directory,\n including whether it exists, how many files are indexed, and\n when it was last updated.\n\nExamples:\n raggrep status\n`);\n process.exit(0);\n }\n\n const { getIndexStatus } = await import('../indexer');\n try {\n const status = await getIndexStatus(process.cwd());\n \n if (!status.exists) {\n console.log(`\n┌─────────────────────────────────────────┐\n│ RAGgrep Status │\n├─────────────────────────────────────────┤\n│ ○ Not indexed │\n└─────────────────────────────────────────┘\n\n Directory: ${status.rootDir}\n\n Run \"raggrep index\" to create an index.\n`);\n } else {\n const date = status.lastUpdated ? new Date(status.lastUpdated) : null;\n const timeAgo = date ? formatTimeAgo(date) : 'unknown';\n \n console.log(`\n┌─────────────────────────────────────────┐\n│ RAGgrep Status │\n├─────────────────────────────────────────┤\n│ ● Indexed │\n└─────────────────────────────────────────┘\n\n Files: ${status.totalFiles.toString().padEnd(10)} Updated: ${timeAgo}\n Location: ${status.indexDir}\n`);\n if (status.modules.length > 0) {\n console.log(' Modules:');\n for (const mod of status.modules) {\n console.log(` └─ ${mod.id} (${mod.fileCount} files)`);\n }\n console.log('');\n }\n }\n } catch (error) {\n console.error('Error getting status:', error);\n process.exit(1);\n }\n break;\n }\n\n default:\n console.log(`\nraggrep v${VERSION} - Local filesystem-based RAG system for codebases\n\nUsage:\n raggrep <command> [options]\n\nCommands:\n index Index the current directory\n query Search the indexed codebase\n status Show the current state of the index\n cleanup Remove stale index entries for deleted files\n\nOptions:\n -h, --help Show help for a command\n -v, --version Show version number\n\nExamples:\n raggrep index\n raggrep query \"user login\"\n raggrep status\n raggrep cleanup\n\nRun 'raggrep <command> --help' for more information.\n`);\n if (command && command !== '--help' && command !== '-h') {\n console.error(`Unknown command: ${command}`);\n process.exit(1);\n }\n }\n}\n\nmain();\n"
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21
+ "debugId": "0D3D8495D3A140B664756E2164756E21",
21
22
  "names": []
22
23
  }
package/dist/domain/entities/fileSummary.d.ts CHANGED
@@ -7,6 +7,19 @@
7
7
  * Stored as individual files in: .raggrep/index/<module>/symbolic/<filepath>.json
8
8
  */
9
9
  import type { ChunkType } from "./chunk";
10
+ /**
11
+ * Path context information for structural search boosting.
12
+ */
13
+ export interface PathContext {
14
+ /** Directory segments (excluding filename) */
15
+ segments: string[];
16
+ /** Detected architectural layer (service, controller, repository, etc.) */
17
+ layer?: string;
18
+ /** Detected feature domain (auth, users, payments, etc.) */
19
+ domain?: string;
20
+ /** Path depth (number of directory levels) */
21
+ depth: number;
22
+ }
10
23
  /**
11
24
  * Lightweight file summary for fast filtering.
12
25
  *
@@ -26,6 +39,11 @@ export interface FileSummary {
26
39
  exports: string[];
27
40
  /** ISO timestamp of when the file was last modified */
28
41
  lastModified: string;
42
+ /**
43
+ * Parsed path context for structural boosting.
44
+ * Includes detected layer, domain, and path depth.
45
+ */
46
+ pathContext?: PathContext;
29
47
  }
30
48
  /**
31
49
  * Metadata for the symbolic index.