rag-lite-ts 2.0.5 → 2.1.0

package/README.md

@@ -1,808 +1,815 @@
-<div align="center">
-
-# 🦎 RAG-lite TS
-
-### *Simple by default, powerful when needed*
-
-**Local-first semantic search that actually works**
-
-[![npm version](https://img.shields.io/npm/v/rag-lite-ts.svg?style=flat-square)](https://www.npmjs.com/package/rag-lite-ts)
-[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg?style=flat-square)](https://opensource.org/licenses/MIT)
-[![TypeScript](https://img.shields.io/badge/TypeScript-5.0+-blue.svg?style=flat-square)](https://www.typescriptlang.org/)
-[![Node.js](https://img.shields.io/badge/Node.js-18+-green.svg?style=flat-square)](https://nodejs.org/)
-
-[Quick Start](#quick-start) • [Features](#features) • [Documentation](#documentation) • [Examples](#examples) • [MCP Integration](#mcp-server-integration)
-
-</div>
-
----
-
-## 🎯 Why RAG-lite TS?
-
-**Stop fighting with complex RAG frameworks.** Get semantic search running in 30 seconds:
-
-```bash
-npm install -g rag-lite-ts
-raglite ingest ./docs/
-raglite search "your query here"
-```
-
-**That's it.** No API keys, no cloud services, no configuration hell.
-
-### 🎬 See It In Action
-
-```typescript
-// 1. Ingest your docs
-const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
-await pipeline.ingestDirectory('./docs/');
-
-// 2. Search semantically
-const search = new SearchEngine('./index.bin', './db.sqlite');
-const results = await search.search('authentication flow');
-
-// 3. Get relevant results instantly
-console.log(results[0].text);
-// "To authenticate users, first obtain a JWT token from the /auth endpoint..."
-```
-
-**Real semantic understanding** - not just keyword matching. Finds "JWT token" when you search for "authentication flow".
-
-### What Makes It Different?
-
-- 🏠 **100% Local** - Your data never leaves your machine
-- 🚀 **Actually Fast** - Sub-100ms queries, not "eventually consistent"
-- 🦎 **Chameleon Architecture** - Automatically adapts between text and multimodal modes
-- 🖼️ **True Multimodal** - Search images with text, text with images (CLIP unified space)
-- 📦 **Zero Runtime Dependencies** - No Python, no Docker, no external services
-- 🎯 **TypeScript Native** - Full type safety, modern ESM architecture
-- 🔌 **MCP Ready** - Built-in Model Context Protocol server for AI agents
-
-![Pipeline](docs/assets/pipeline.png)
-
----
-
-## 🎉 What's New in 2.0
-
-**Chameleon Multimodal Architecture** - RAG-lite TS now seamlessly adapts between text-only and multimodal search:
-
-### 🖼️ Multimodal Search
-- **CLIP Integration** - Unified 512D embedding space for text and images
-- **Cross-Modal Search** - Find images with text queries, text with image queries
-- **Image-to-Text Generation** - Automatic descriptions using vision-language models
-- **Smart Reranking** - Text-derived, metadata-based, and hybrid strategies
-
-### 🏗️ Architecture Improvements
-- **Layered Architecture** - Clean separation: core (model-agnostic) → implementation (text/multimodal) → public API
-- **Mode Persistence** - Configuration stored in database, auto-detected during search
-- **Unified Content System** - Memory-based ingestion for AI agents, format-adaptive retrieval
-- **Simplified APIs** - `createEmbedder()` and `createReranker()` replace complex factory patterns
-
-### 🤖 MCP Server Enhancements
-- **Multimodal Tools** - `multimodal_search`, `ingest_image` with URL download
-- **Base64 Image Delivery** - Automatic encoding for AI agent integration
-- **Content-Type Filtering** - Filter results by text, image, pdf, docx
-- **Dynamic Tool Descriptions** - Context-aware tool documentation
-
-### 📦 Migration from 1.x
-Existing databases need schema updates for multimodal support. Two options:
-1. **Automatic Migration**: Use `migrateToRagLiteStructure()` function
-2. **Fresh Start**: Re-ingest content with v2.0.0
-
-See [CHANGELOG.md](CHANGELOG.md) for complete details.
-
----
-
-## 📋 Table of Contents
-
-- [Why RAG-lite TS?](#-why-rag-lite-ts)
-- [Quick Start](#-quick-start)
-- [Features](#-features)
-- [Real-World Examples](#-real-world-examples)
-- [How It Works](#-how-it-works)
-- [Supported Models](#-supported-models)
-- [Documentation](#-documentation)
-- [MCP Server Integration](#-mcp-server-integration)
-- [Development](#-development)
-- [Contributing](#-contributing)
-- [License](#-license)
-
-## 🚀 Quick Start
-
-### Installation
-
-```bash
-npm install -g rag-lite-ts
-```
-
-### Basic Usage
-
-```bash
-# Ingest documents
-raglite ingest ./docs/
-
-# Search your documents
-raglite search "machine learning concepts"
-
-# Get more results with reranking
-raglite search "API documentation" --top-k 10 --rerank
-```
-
-### Using Different Models
-
-```bash
-# Use higher quality model (auto-rebuilds if needed)
-raglite ingest ./docs/ --model Xenova/all-mpnet-base-v2 --rebuild-if-needed
-
-# Search automatically uses the correct model
-raglite search "complex query"
-```
-
-### Content Retrieval and MCP Integration
-
-```typescript
-import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
-
-// Memory-based ingestion for AI agents
-const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
-const content = Buffer.from('Document from AI agent');
-await pipeline.ingestFromMemory(content, {
-  displayName: 'agent-document.txt'
-});
-
-// Format-adaptive content retrieval
-const search = new SearchEngine('./index.bin', './db.sqlite');
-const results = await search.search('query');
-
-// Get file path for CLI clients
-const filePath = await search.getContent(results[0].contentId, 'file');
-
-// Get base64 content for MCP clients
-const base64 = await search.getContent(results[0].contentId, 'base64');
-```
-
-### Multimodal Search (Text + Images)
-
-RAG-lite TS now supports true multimodal search using CLIP's unified embedding space, enabling cross-modal search between text and images:
-
-```bash
-# Enable multimodal processing for text and image content
-raglite ingest ./docs/ --mode multimodal
-
-# Cross-modal search: Find images using text queries
-raglite search "architecture diagram" --content-type image
-raglite search "red sports car" --content-type image
-
-# Find text documents about visual concepts
-raglite search "user interface design" --content-type text
-
-# Search across both content types (default)
-raglite search "system overview"
-
-# Use different reranking strategies for optimal results
-raglite ingest ./docs/ --mode multimodal --rerank-strategy text-derived
-```
-
-**Key Features:**
-- **Unified embedding space**: Text and images embedded in the same 512-dimensional CLIP space
-- **Cross-modal search**: Text queries find semantically similar images
-- **Automatic mode detection**: Set mode once during ingestion, automatically detected during search
-- **Multiple reranking strategies**: text-derived, metadata, hybrid, or disabled
-- **Seamless experience**: Same CLI commands work for both text-only and multimodal content
-
-→ **[Complete Multimodal Tutorial](docs/multimodal-tutorial.md)**
-
-### Programmatic Usage
-
-```typescript
-import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
-
-// Text-only mode (default)
-const ingestion = new IngestionPipeline('./db.sqlite', './vector-index.bin');
-await ingestion.ingestDirectory('./docs/');
-
-// Multimodal mode (text + images)
-const multimodalIngestion = new IngestionPipeline('./db.sqlite', './index.bin', {
-  mode: 'multimodal',
-  embeddingModel: 'Xenova/clip-vit-base-patch32',
-  rerankingStrategy: 'text-derived'
-});
-await multimodalIngestion.ingestDirectory('./mixed-content/');
-
-// Search (mode auto-detected from database)
-const search = new SearchEngine('./vector-index.bin', './db.sqlite');
-const results = await search.search('machine learning', { top_k: 10 });
-
-// Cross-modal search in multimodal mode
-const imageResults = results.filter(r => r.contentType === 'image');
-const textResults = results.filter(r => r.contentType === 'text');
-```
-
-### Memory Ingestion & Unified Content System (NEW)
-
-```typescript
-// Ingest content directly from memory (perfect for MCP integration)
-const content = Buffer.from('# AI Guide\n\nComprehensive AI concepts...');
-const contentId = await ingestion.ingestFromMemory(content, {
-  displayName: 'AI Guide.md',
-  contentType: 'text/markdown'
-});
-
-// Retrieve content in different formats based on client needs
-const filePath = await search.getContent(contentId, 'file');     // For CLI clients
-const base64Data = await search.getContent(contentId, 'base64'); // For MCP clients
-
-// Batch content retrieval for efficiency
-const contentIds = ['id1', 'id2', 'id3'];
-const contents = await search.getContentBatch(contentIds, 'base64');
-
-// Content management with deduplication
-const stats = await ingestion.getStorageStats();
-console.log(`Content directory: ${stats.contentDirSize} bytes, ${stats.fileCount} files`);
-
-// Cleanup orphaned content
-const cleanupResult = await ingestion.cleanup();
-console.log(`Removed ${cleanupResult.removedFiles} orphaned files`);
-```
-
-#### Configuration Options
-
-```typescript
-import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
-
-// Custom model configuration
-const search = new SearchEngine('./vector-index.bin', './db.sqlite', {
-  embeddingModel: 'Xenova/all-mpnet-base-v2',
-  enableReranking: true,
-  topK: 15
-});
-
-// Ingestion with custom settings
-const ingestion = new IngestionPipeline('./db.sqlite', './vector-index.bin', {
-  embeddingModel: 'Xenova/all-mpnet-base-v2',
-  chunkSize: 400,
-  chunkOverlap: 80
-});
-```
-
-→ **[Complete CLI Reference](docs/cli-reference.md)** | **[API Documentation](docs/api-reference.md)**
-
----
-
-## 💡 Real-World Examples
-
-<details>
-<summary><b>🔍 Build a Documentation Search Engine</b></summary>
-
-```typescript
-import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
-
-// Ingest your docs once
-const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
-await pipeline.ingestDirectory('./docs/');
-
-// Search instantly
-const search = new SearchEngine('./index.bin', './db.sqlite');
-const results = await search.search('authentication flow');
-
-results.forEach(r => {
-  console.log(`${r.metadata.title}: ${r.text}`);
-  console.log(`Relevance: ${r.score.toFixed(3)}\n`);
-});
-```
-
-**Use case:** Internal documentation, API references, knowledge bases
-
-</details>
-
-<details>
-<summary><b>🖼️ Search Images with Natural Language</b></summary>
-
-```bash
-# Ingest mixed content (text + images)
-raglite ingest ./assets/ --mode multimodal
-
-# Find images using text descriptions
-raglite search "architecture diagram" --content-type image
-raglite search "team photo" --content-type image
-raglite search "product screenshot" --content-type image
-```
-
-**Use case:** Digital asset management, photo libraries, design systems
-
-</details>
-
-<details>
-<summary><b>🤖 AI Agent with Memory</b></summary>
-
-```typescript
-// Agent ingests conversation context
-const content = Buffer.from('User prefers dark mode. Uses TypeScript.');
-await pipeline.ingestFromMemory(content, {
-  displayName: 'user-preferences.txt'
-});
-
-// Later, agent retrieves relevant context
-const context = await search.search('user interface preferences');
-// Agent now knows: "User prefers dark mode"
-```
-
-**Use case:** Chatbots, AI assistants, context-aware agents
-
-</details>
-
-<details>
-<summary><b>📊 Semantic Code Search</b></summary>
-
-```typescript
-// Index your codebase
-await pipeline.ingestDirectory('./src/', {
-  chunkSize: 500,  // Larger chunks for code
-  chunkOverlap: 100
-});
-
-// Find code by intent, not keywords
-const results = await search.search('authentication middleware');
-// Finds relevant code even if it doesn't contain those exact words
-```
-
-**Use case:** Code navigation, refactoring, onboarding
-
-</details>
-
-<details>
-<summary><b>🔌 MCP Server for Claude/AI Tools</b></summary>
-
-```json
-{
-  "mcpServers": {
-    "my-docs": {
-      "command": "raglite-mcp",
-      "env": {
-        "RAG_DB_FILE": "./docs/db.sqlite",
-        "RAG_INDEX_FILE": "./docs/index.bin"
-      }
-    }
-  }
-}
-```
-
-Now Claude can search your docs directly! Works with any MCP-compatible AI tool.
-
-**Use case:** AI-powered documentation, intelligent assistants
-
-</details>
-
----
-
-## ✨ Features
-
-<table>
-<tr>
-<td width="50%">
-
-### 🎯 Developer Experience
-- **One-line setup** - `new SearchEngine()` just works
-- **TypeScript native** - Full type safety
-- **Zero config** - Sensible defaults everywhere
-- **Hackable** - Clean architecture, easy to extend
-
-</td>
-<td width="50%">
-
-### 🚀 Performance
-- **Sub-100ms queries** - Fast vector search
-- **Offline-first** - No network calls
-- **Efficient chunking** - Smart semantic boundaries
-- **Optimized models** - Multiple quality/speed options
-
-</td>
-</tr>
-<tr>
-<td width="50%">
-
-### 🦎 Chameleon Architecture
-- **Auto-adapting** - Text or multimodal mode
-- **Mode persistence** - Set once, auto-detected
-- **No fallbacks** - Reliable or clear failure
-- **Polymorphic runtime** - Same API, different modes
-
-</td>
-<td width="50%">
-
-### 🖼️ Multimodal Search
-- **CLIP unified space** - Text and images together
-- **Cross-modal queries** - Text finds images, vice versa
-- **Multiple strategies** - Text-derived, metadata, hybrid
-- **Seamless experience** - Same commands, more power
-
-</td>
-</tr>
-<tr>
-<td width="50%">
-
-### 🔌 Integration Ready
-- **MCP server included** - AI agent integration
-- **Memory ingestion** - Direct buffer processing
-- **Format-adaptive** - File paths or base64 data
-- **Multi-instance** - Run multiple databases
-
-</td>
-<td width="50%">
-
-### 🛠️ Production Ready
-- **Content management** - Deduplication, cleanup
-- **Model compatibility** - Auto-detection, rebuilds
-- **Error recovery** - Clear messages, helpful hints
-
-</td>
-</tr>
-</table>
-
-### 📁 Supported File Formats
-
-RAG-lite TS supports the following file formats with full processing implementations:
-
-**Text Mode:**
-- Markdown: `.md`, `.mdx`
-- Plain text: `.txt`
-- Documents: `.pdf`, `.docx`
-
-**Multimodal Mode** (includes all text formats plus):
-- Images: `.jpg`, `.jpeg`, `.png`, `.gif`, `.webp`, `.bmp`
-
-All formats work seamlessly with both single file and directory ingestion:
-
-```bash
-# Single file ingestion
-raglite ingest ./document.pdf
-raglite ingest ./readme.md
-raglite ingest ./notes.txt
-
-# Directory ingestion (processes all supported formats)
-raglite ingest ./docs/
-
-# Multimodal ingestion (includes images)
-raglite ingest ./mixed-content/ --mode multimodal
-```
-
-## 🔧 How It Works
-
-RAG-lite TS follows a clean, efficient pipeline:
-
-```
-📄 Documents → 🧹 Preprocessing → ✂️ Chunking → 🧠 Embedding → 💾 Storage
-                                                                      ↓
-🎯 Results ← 🔄 Reranking ← 🔍 Vector Search ← 🧠 Query Embedding ← ❓ Query
-```
-
-### Pipeline Steps
-
-| Step | What Happens | Technologies |
-|------|--------------|--------------|
-| **1. Ingestion** | Reads `.md`, `.txt`, `.pdf`, `.docx`, images | Native parsers |
-| **2. Preprocessing** | Cleans JSX, Mermaid, code blocks, generates image descriptions | Custom processors |
-| **3. Chunking** | Splits at natural boundaries with token limits | Semantic chunking |
-| **4. Embedding** | Converts text/images to vectors | transformers.js |
-| **5. Storage** | Indexes vectors, stores metadata | hnswlib + SQLite |
-| **6. Search** | Finds similar chunks via cosine similarity | HNSW algorithm |
-| **7. Reranking** | Re-scores results for relevance | Cross-encoder/metadata |
-
-### 🦎 Chameleon Architecture
-
-The system **automatically adapts** based on your content:
-
-<table>
-<tr>
-<td width="50%">
-
-#### 📝 Text Mode
-```
-Text Docs → Sentence Transformer
-              ↓
-         384D Vectors
-              ↓
-      HNSW Index + SQLite
-              ↓
-    Cross-Encoder Reranking
-```
-
-**Best for:** Documentation, articles, code
-
-</td>
-<td width="50%">
-
-#### 🖼️ Multimodal Mode
-```
-Text + Images → CLIP Embedder
-                    ↓
-              512D Unified Space
-                    ↓
-          HNSW Index + SQLite
-                    ↓
-        Text-Derived Reranking
-```
-
-**Best for:** Mixed content, visual search
-
-</td>
-</tr>
-</table>
-
-**🎯 Key Benefits:**
-- Set mode **once** during ingestion → Auto-detected during search
-- **Cross-modal search** - Text queries find images, image queries find text
-- **No fallback complexity** - Each mode works reliably or fails clearly
-- **Same API** - Your code doesn't change between modes
-
-→ **[Document Preprocessing Guide](docs/preprocessing.md)** | **[Model Management Details](models/README.md)**
-
-## 🧠 Supported Models
-
-Choose the right model for your use case:
-
-### 📝 Text Mode Models
-
-| Model | Dims | Speed | Quality | Best For |
-|-------|------|-------|---------|----------|
-| `sentence-transformers/all-MiniLM-L6-v2` ⭐ | 384 | ⚡⚡⚡ | ⭐⭐⭐ | General purpose (default) |
-| `Xenova/all-mpnet-base-v2` | 768 | ⚡⚡ | ⭐⭐⭐⭐ | Complex queries, higher accuracy |
-
-### 🖼️ Multimodal Models
-
-| Model | Dims | Speed | Quality | Best For |
-|-------|------|-------|---------|----------|
-| `Xenova/clip-vit-base-patch32` ⭐ | 512 | ⚡⚡ | ⭐⭐⭐ | Text + images (default) |
-| `Xenova/clip-vit-base-patch16` | 512 | ⚡ | ⭐⭐⭐⭐ | Higher visual quality |
-
-### ✨ Model Features
-
-- ✅ **Auto-download** - Models cached locally on first use
-- ✅ **Smart compatibility** - Detects model changes, prompts rebuilds
-- ✅ **Offline support** - Pre-download for air-gapped environments
-- ✅ **Zero config** - Works out of the box with sensible defaults
-- ✅ **Cross-modal** - CLIP enables text ↔ image search
-
-→ **[Complete Model Guide](docs/model-guide.md)** | **[Performance Benchmarks](docs/EMBEDDING_MODELS_COMPARISON.md)**
-
-## 📚 Documentation
-
-<table>
-<tr>
-<td width="33%">
-
-### 🚀 Getting Started
-- [CLI Reference](docs/cli-reference.md)
-- [API Reference](docs/api-reference.md)
-- [Multimodal Tutorial](docs/multimodal-tutorial.md)
-- [Unified Content System](docs/unified-content-system.md)
-
-</td>
-<td width="33%">
-
-### 🔧 Advanced
-- [Configuration Guide](docs/configuration.md)
-- [Model Selection](docs/model-guide.md)
-- [Multimodal Config](docs/multimodal-configuration.md)
-- [Path Strategies](docs/path-strategies.md)
-
-</td>
-<td width="33%">
-
-### 🛠️ Support
-- [Troubleshooting](docs/troubleshooting.md)
-- [Multimodal Issues](docs/multimodal-troubleshooting.md)
-- [Content Issues](docs/unified-content-troubleshooting.md)
-- [Benchmarks](docs/EMBEDDING_MODELS_COMPARISON.md)
-
-</td>
-</tr>
-</table>
-
-### 🎯 Quick Start by Role
-
-| I want to... | Start here |
-|--------------|------------|
-| 🆕 Try it out | [CLI Reference](docs/cli-reference.md) → `npm i -g rag-lite-ts` |
-| 🖼️ Search images | [Multimodal Tutorial](docs/multimodal-tutorial.md) → `--mode multimodal` |
-| 💻 Build an app | [API Reference](docs/api-reference.md) → `new SearchEngine()` |
-| 🤖 Integrate with AI | [MCP Guide](docs/mcp-server-multimodal-guide.md) → `raglite-mcp` |
-| ⚡ Optimize performance | [Model Guide](docs/model-guide.md) → Choose your model |
-| 🐛 Fix an issue | [Troubleshooting](docs/troubleshooting.md) → Common solutions |
-
-**📖 [Complete Documentation Hub](docs/README.md)**
-
-## 🔌 MCP Server Integration
-
-**Give your AI agents semantic memory.** RAG-lite TS includes a built-in Model Context Protocol (MCP) server.
-
-```bash
-# Start MCP server (works with Claude, Cline, and other MCP clients)
-raglite-mcp
-```
-
-### Single Instance Configuration
-
-**MCP Configuration:**
-```json
-{
-  "mcpServers": {
-    "rag-lite": {
-      "command": "raglite-mcp",
-      "args": []
-    }
-  }
-}
-```
-
-### Multiple Instance Configuration (NEW)
-
-Run multiple MCP server instances for different databases with **intelligent routing**:
-
-```json
-{
-  "mcpServers": {
-    "rag-lite-text-docs": {
-      "command": "npx",
-      "args": ["rag-lite-mcp"],
-      "env": {
-        "RAG_DB_FILE": "./text-docs/db.sqlite",
-        "RAG_INDEX_FILE": "./text-docs/index.bin"
-      }
-    },
-    "rag-lite-multimodal-images": {
-      "command": "npx",
-      "args": ["rag-lite-mcp"],
-      "env": {
-        "RAG_DB_FILE": "./mixed-content/db.sqlite",
-        "RAG_INDEX_FILE": "./mixed-content/index.bin"
-      }
-    }
-  }
-}
-```
-
-**Dynamic Tool Descriptions:**
-Each server automatically detects and advertises its capabilities:
-- `[TEXT MODE]` - Text-only databases clearly indicate supported file types
-- `[MULTIMODAL MODE]` - Multimodal databases advertise image support and cross-modal search
-- AI assistants can intelligently route queries to the appropriate database
-
-**Available Tools:** `search`, `ingest`, `ingest_image`, `multimodal_search`, `rebuild_index`, `get_stats`, `get_mode_info`, `list_supported_models`, `list_reranking_strategies`, `get_system_stats`
-
-**Multimodal Features:**
-- Search across text and image content
-- Retrieve image content as base64 data
-- Cross-modal search capabilities (text queries find images)
-- Automatic mode detection from database
-- Content type filtering
-- Multiple reranking strategies
-
-→ **[Complete MCP Integration Guide](docs/cli-reference.md#mcp-server)** | **[MCP Multimodal Guide](docs/mcp-server-multimodal-guide.md)** | **[Multi-Instance Setup](docs/mcp-server-multimodal-guide.md#running-multiple-mcp-server-instances)**
-
----
-
-## 🛠️ Development
-
-### Building from Source
-
-```bash
-# Clone and setup
-git clone https://github.com/your-username/rag-lite-ts.git
-cd rag-lite-ts
-npm install
-
-# Build and link for development
-npm run build
-npm link  # Makes raglite/raglite-mcp available globally
-
-# Run tests
-npm test
-npm run test:integration
-```
-
-### Project Structure
-
-```
-src/
-├── index.ts              # Main exports and factory functions
-├── search.ts             # Public SearchEngine API
-├── ingestion.ts          # Public IngestionPipeline API
-├── core/                 # Model-agnostic core layer
-│   ├── search.ts         # Core search engine
-│   ├── ingestion.ts      # Core ingestion pipeline
-│   ├── db.ts             # SQLite operations
-│   ├── config.ts         # Configuration system
-│   ├── content-manager.ts # Content storage and management
-│   └── types.ts          # Core type definitions
-├── text/                 # Text-specific implementations
-│   ├── embedder.ts       # Sentence-transformer embedder
-│   ├── reranker.ts       # Cross-encoder reranking
-│   └── tokenizer.ts      # Text tokenization
-├── multimodal/           # Multimodal implementations
-│   ├── embedder.ts       # CLIP embedder (text + images)
-│   ├── reranker.ts       # Text-derived and metadata reranking
-│   ├── image-processor.ts # Image description and metadata
-│   └── content-types.ts  # Content type detection
-├── cli.ts                # CLI interface
-├── mcp-server.ts         # MCP server
-└── preprocessors/        # Content type processors
-
-dist/                     # Compiled output
-```
-
-### Design Philosophy
-
-**Simple by default, powerful when needed:**
-- ✅ Simple constructors work immediately with sensible defaults
-- ✅ Configuration options available when you need customization
-- ✅ Advanced patterns available for complex use cases
-- ✅ Clean architecture with minimal dependencies
-- ✅ No ORMs or heavy frameworks - just TypeScript and SQLite
-- ✅ Extensible design for future capabilities
-
-This approach ensures that basic usage is effortless while providing the flexibility needed for advanced scenarios.
-
----
-
-## 🤝 Contributing
-
-We welcome contributions! Whether it's:
-
-- 🐛 Bug fixes
-- ✨ New features
-- 📝 Documentation improvements
-- 🧪 Test coverage
-- 💡 Ideas and suggestions
-
-**Guidelines:**
-1. Fork the repository
-2. Create a feature branch (`git checkout -b feature/amazing-feature`)
-3. Make your changes with tests
-4. Ensure all tests pass (`npm test`)
-5. Submit a pull request
-
-We maintain clean architecture principles while enhancing functionality and developer experience.
-
----
-
-## 🎯 Why We Built This
-
-Existing RAG solutions are either:
-- 🔴 **Too complex** - Require extensive setup and configuration
-- 🔴 **Cloud-dependent** - Need API keys and external services
-- 🔴 **Python-only** - Not ideal for TypeScript/Node.js projects
-- 🔴 **Heavy** - Massive dependencies and slow startup
-
-**RAG-lite TS is different:**
-- ✅ **Simple** - Works out of the box with zero config
-- ✅ **Local-first** - Your data stays on your machine
-- ✅ **TypeScript native** - Built for modern JS/TS projects
-- ✅ **Lightweight** - Fast startup, minimal dependencies
-
----
-
-## 🙏 Acknowledgments
-
-Built with amazing open-source projects:
-
-- **[transformers.js](https://github.com/xenova/transformers.js)** - Client-side ML models by Xenova
-- **[hnswlib](https://github.com/nmslib/hnswlib)** - Fast approximate nearest neighbor search
-- **[better-sqlite3](https://github.com/WiseLibs/better-sqlite3)** - Fast SQLite3 bindings
-
----
-
-## 📄 License
-
-MIT License - see [LICENSE](LICENSE) file for details.
-
----
-
-<div align="center">
-
-**⭐ Star us on GitHub — it helps!**
-
-[Report Bug](https://github.com/your-username/rag-lite-ts/issues) • [Request Feature](https://github.com/your-username/rag-lite-ts/issues) • [Documentation](docs/README.md)
-
-Made with ❤️ by developers, for developers
-
-</div>
+<div align="center">
+
+# 🦎 RAG-lite TS
+
+### *Simple by default, powerful when needed*
+
+**Local-first semantic search that actually works**
+
+[![npm version](https://img.shields.io/npm/v/rag-lite-ts.svg?style=flat-square)](https://www.npmjs.com/package/rag-lite-ts)
+[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg?style=flat-square)](https://opensource.org/licenses/MIT)
+[![TypeScript](https://img.shields.io/badge/TypeScript-5.0+-blue.svg?style=flat-square)](https://www.typescriptlang.org/)
+[![Node.js](https://img.shields.io/badge/Node.js-18+-green.svg?style=flat-square)](https://nodejs.org/)
+
+[Quick Start](#quick-start) • [Features](#features) • [Documentation](#documentation) • [Examples](#examples) • [MCP Integration](#mcp-server-integration)
+
+</div>
+
+---
+
+## 🎯 Why RAG-lite TS?
+
+**Stop fighting with complex RAG frameworks.** Get semantic search running in 30 seconds:
+
+```bash
+npm install -g rag-lite-ts
+raglite ingest ./docs/
+raglite search "your query here"
+```
+
+**That's it.** No API keys, no cloud services, no configuration hell.
+
+### 🎬 See It In Action
+
+```typescript
+// 1. Ingest your docs
+const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
+await pipeline.ingestDirectory('./docs/');
+
+// 2. Search semantically
+const search = new SearchEngine('./index.bin', './db.sqlite');
+const results = await search.search('authentication flow');
+
+// 3. Get relevant results instantly
+console.log(results[0].text);
+// "To authenticate users, first obtain a JWT token from the /auth endpoint..."
+```
+
+**Real semantic understanding** - not just keyword matching. Finds "JWT token" when you search for "authentication flow".
+
+### What Makes It Different?
+
+- 🏠 **100% Local** - Your data never leaves your machine
+- 🚀 **Actually Fast** - Sub-100ms queries, not "eventually consistent"
+- 🦎 **Chameleon Architecture** - Automatically adapts between text and multimodal modes
+- 🖼️ **True Multimodal** - Search images with text, text with images (CLIP unified space)
+- 📦 **Zero Runtime Dependencies** - No Python, no Docker, no external services
+- 🎯 **TypeScript Native** - Full type safety, modern ESM architecture
+- 🔌 **MCP Ready** - Built-in Model Context Protocol server for AI agents
+
+![Pipeline](docs/assets/pipeline.png)
+
+---
+
+## 🎉 What's New in 2.0
+
+**Chameleon Multimodal Architecture** - RAG-lite TS now seamlessly adapts between text-only and multimodal search:
+
+### 🖼️ Multimodal Search
+- **CLIP Integration** - Unified 512D embedding space for text and images
+- **Cross-Modal Search** - Find images with text queries, text with image queries
+- **Image-to-Text Generation** - Automatic descriptions using vision-language models
+- **Smart Reranking** - Automatic strategy selection with cross-encoder and text-derived methods
+
+### 🏗️ Architecture Improvements
+- **Layered Architecture** - Clean separation: core (model-agnostic) → implementation (text/multimodal) → public API
+- **Mode Persistence** - Configuration stored in database, auto-detected during search
+- **Unified Content System** - Memory-based ingestion for AI agents, format-adaptive retrieval
+- **Simplified APIs** - `createEmbedder()` and `createReranker()` replace complex factory patterns
+
+### 🤖 MCP Server Enhancements
+- **Multimodal Tools** - `multimodal_search`, `ingest_image` with URL download
+- **Base64 Image Delivery** - Automatic encoding for AI agent integration
+- **Content-Type Filtering** - Filter results by text, image, pdf, docx
+- **Dynamic Tool Descriptions** - Context-aware tool documentation
+
+### 📦 Migration from 1.x
+Existing databases need schema updates for multimodal support. Two options:
+1. **Automatic Migration**: Use `migrateToRagLiteStructure()` function
+2. **Fresh Start**: Re-ingest content with v2.0.0
+
+See [CHANGELOG.md](CHANGELOG.md) for complete details.
+
+---
+
+## 📋 Table of Contents
+
+- [Why RAG-lite TS?](#-why-rag-lite-ts)
+- [Quick Start](#-quick-start)
+- [Features](#-features)
+- [Real-World Examples](#-real-world-examples)
+- [How It Works](#-how-it-works)
+- [Supported Models](#-supported-models)
+- [Documentation](#-documentation)
+- [MCP Server Integration](#-mcp-server-integration)
+- [Development](#-development)
+- [Contributing](#-contributing)
+- [License](#-license)
+
+## 🚀 Quick Start
+
+### Installation
+
+```bash
+npm install -g rag-lite-ts
+```
+
+### Basic Usage
+
+```bash
+# Ingest documents
+raglite ingest ./docs/
+
+# Search your documents
+raglite search "machine learning concepts"
+
+# Get more results with reranking (use --rerank for better quality)
+raglite search "API documentation" --top-k 10 --rerank
+```
+
+### Using Different Models
+
+```bash
+# Use higher quality model (auto-rebuilds if needed)
+raglite ingest ./docs/ --model Xenova/all-mpnet-base-v2 --rebuild-if-needed
+
+# Search automatically uses the correct model
+raglite search "complex query"
+```
+
+### Content Retrieval and MCP Integration
+
+```typescript
+import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
+
+// Memory-based ingestion for AI agents
+const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
+const content = Buffer.from('Document from AI agent');
+await pipeline.ingestFromMemory(content, {
+  displayName: 'agent-document.txt'
+});
+
+// Format-adaptive content retrieval
+const search = new SearchEngine('./index.bin', './db.sqlite');
+const results = await search.search('query');
+
+// Get file path for CLI clients
+const filePath = await search.getContent(results[0].contentId, 'file');
+
+// Get base64 content for MCP clients
+const base64 = await search.getContent(results[0].contentId, 'base64');
+```
+
+### Multimodal Search (Text + Images)
+
+RAG-lite TS now supports true multimodal search using CLIP's unified embedding space, enabling cross-modal search between text and images:
+
+```bash
+# Enable multimodal processing for text and image content
+raglite ingest ./docs/ --mode multimodal
+
+# Cross-modal search: Find images using text queries
+raglite search "architecture diagram" --content-type image
+raglite search "red sports car" --content-type image
+
+# Image-to-image search: Find similar images using image files
+raglite search ./photo.jpg                    # Find similar images
+raglite search ./diagram.png --top-k 5       # Find similar images with custom count
+
+# Find text documents about visual concepts
+raglite search "user interface design" --content-type text
+
+# Search across both content types (default)
+raglite search "system overview"
+
+# Automatic reranking based on mode (text: cross-encoder, multimodal: text-derived)
+```
+
+**Key Features:**
+- **Unified embedding space**: Text and images embedded in the same 512-dimensional CLIP space
+- **Cross-modal search**: Text queries find semantically similar images
+- **Automatic mode detection**: Set mode once during ingestion, automatically detected during search
+- **Automatic reranking**: Cross-encoder for text, text-derived for multimodal, with enable/disable control
+- **Seamless experience**: Same CLI commands work for both text-only and multimodal content
+
+→ **[Complete Multimodal Tutorial](docs/multimodal-tutorial.md)**
+
+### Programmatic Usage
+
+```typescript
+import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
+
+// Text-only mode (default)
+const ingestion = new IngestionPipeline('./db.sqlite', './vector-index.bin');
+await ingestion.ingestDirectory('./docs/');
+
+// Multimodal mode (text + images)
+const multimodalIngestion = new IngestionPipeline('./db.sqlite', './index.bin', {
+  mode: 'multimodal',
+  embeddingModel: 'Xenova/clip-vit-base-patch32',
+  rerankingStrategy: 'text-derived'
+});
+await multimodalIngestion.ingestDirectory('./mixed-content/');
+
+// Search (mode auto-detected from database)
+const search = new SearchEngine('./vector-index.bin', './db.sqlite');
+const results = await search.search('machine learning', { top_k: 10 });
+
+// Cross-modal search in multimodal mode
+const imageResults = results.filter(r => r.contentType === 'image');
+const textResults = results.filter(r => r.contentType === 'text');
+```
+
+### Memory Ingestion & Unified Content System (NEW)
+
+```typescript
+// Ingest content directly from memory (perfect for MCP integration)
+const content = Buffer.from('# AI Guide\n\nComprehensive AI concepts...');
+const contentId = await ingestion.ingestFromMemory(content, {
+  displayName: 'AI Guide.md',
+  contentType: 'text/markdown'
+});
+
+// Retrieve content in different formats based on client needs
+const filePath = await search.getContent(contentId, 'file');     // For CLI clients
+const base64Data = await search.getContent(contentId, 'base64'); // For MCP clients
+
+// Batch content retrieval for efficiency
+const contentIds = ['id1', 'id2', 'id3'];
+const contents = await search.getContentBatch(contentIds, 'base64');
+
+// Content management with deduplication
+const stats = await ingestion.getStorageStats();
+console.log(`Content directory: ${stats.contentDirSize} bytes, ${stats.fileCount} files`);
+
+// Cleanup orphaned content
+const cleanupResult = await ingestion.cleanup();
+console.log(`Removed ${cleanupResult.removedFiles} orphaned files`);
+```
+
+#### Configuration Options
+
+```typescript
+import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
+
+// Custom model configuration
+const search = new SearchEngine('./vector-index.bin', './db.sqlite', {
+  embeddingModel: 'Xenova/all-mpnet-base-v2',
+  enableReranking: true,
+  topK: 15
+});
+
+// Ingestion with custom settings
+const ingestion = new IngestionPipeline('./db.sqlite', './vector-index.bin', {
+  embeddingModel: 'Xenova/all-mpnet-base-v2',
+  chunkSize: 400,
+  chunkOverlap: 80
+});
+```
+
+→ **[Complete CLI Reference](docs/cli-reference.md)** | **[API Documentation](docs/api-reference.md)**
+
+---
+
+## 💡 Real-World Examples
+
+<details>
+<summary><b>🔍 Build a Documentation Search Engine</b></summary>
+
+```typescript
+import { SearchEngine, IngestionPipeline } from 'rag-lite-ts';
+
+// Ingest your docs once
+const pipeline = new IngestionPipeline('./db.sqlite', './index.bin');
+await pipeline.ingestDirectory('./docs/');
+
+// Search instantly
+const search = new SearchEngine('./index.bin', './db.sqlite');
+const results = await search.search('authentication flow');
+
+results.forEach(r => {
+  console.log(`${r.metadata.title}: ${r.text}`);
+  console.log(`Relevance: ${r.score.toFixed(3)}\n`);
+});
+```
+
+**Use case:** Internal documentation, API references, knowledge bases
+
+</details>
+
+<details>
+<summary><b>🖼️ Search Images with Natural Language</b></summary>
+
+```bash
+# Ingest mixed content (text + images)
+raglite ingest ./assets/ --mode multimodal
+
+# Find images using text descriptions
+raglite search "architecture diagram" --content-type image
+raglite search "team photo" --content-type image
+raglite search "product screenshot" --content-type image
+
+# Or find similar images using image files directly
+raglite search ./reference-diagram.png --content-type image
+raglite search ./sample-photo.jpg --top-k 5
+```
+
+**Use case:** Digital asset management, photo libraries, design systems
+
+</details>
+
+<details>
+<summary><b>🤖 AI Agent with Memory</b></summary>
+
+```typescript
+// Agent ingests conversation context
+const content = Buffer.from('User prefers dark mode. Uses TypeScript.');
+await pipeline.ingestFromMemory(content, {
+  displayName: 'user-preferences.txt'
+});
+
+// Later, agent retrieves relevant context
+const context = await search.search('user interface preferences');
+// Agent now knows: "User prefers dark mode"
+```
+
+**Use case:** Chatbots, AI assistants, context-aware agents
+
+</details>
+
+<details>
+<summary><b>📊 Semantic Code Search</b></summary>
+
+```typescript
+// Index your codebase
+await pipeline.ingestDirectory('./src/', {
+  chunkSize: 500,  // Larger chunks for code
+  chunkOverlap: 100
+});
+
+// Find code by intent, not keywords
+const results = await search.search('authentication middleware');
+// Finds relevant code even if it doesn't contain those exact words
+```
+
+**Use case:** Code navigation, refactoring, onboarding
+
+</details>
+
+<details>
+<summary><b>🔌 MCP Server for Claude/AI Tools</b></summary>
+
+```json
+{
+  "mcpServers": {
+    "my-docs": {
+      "command": "raglite-mcp",
+      "env": {
+        "RAG_DB_FILE": "./docs/db.sqlite",
+        "RAG_INDEX_FILE": "./docs/index.bin"
+      }
+    }
+  }
+}
+```
+
+Now Claude can search your docs directly! Works with any MCP-compatible AI tool.
+
+**Use case:** AI-powered documentation, intelligent assistants
+
+</details>
+
+---
+
+## ✨ Features
+
+<table>
+<tr>
+<td width="50%">
+
+### 🎯 Developer Experience
+- **One-line setup** - `new SearchEngine()` just works
+- **TypeScript native** - Full type safety
+- **Zero config** - Sensible defaults everywhere
+- **Hackable** - Clean architecture, easy to extend
+
+</td>
+<td width="50%">
+
+### 🚀 Performance
+- **Sub-100ms queries** - Fast vector search
+- **Offline-first** - No network calls
+- **Efficient chunking** - Smart semantic boundaries
+- **Optimized models** - Multiple quality/speed options
+
+</td>
+</tr>
+<tr>
+<td width="50%">
+
+### 🦎 Chameleon Architecture
+- **Auto-adapting** - Text or multimodal mode
+- **Mode persistence** - Set once, auto-detected
+- **No fallbacks** - Reliable or clear failure
+- **Polymorphic runtime** - Same API, different modes
+
+</td>
+<td width="50%">
+
+### 🖼️ Multimodal Search
+- **CLIP unified space** - Text and images together
+- **Cross-modal queries** - Text finds images, vice versa
+- **Smart reranking** - Automatic strategy selection by mode
+- **Seamless experience** - Same commands, more power
+
+</td>
+</tr>
+<tr>
+<td width="50%">
+
+### 🔌 Integration Ready
+- **MCP server included** - AI agent integration
+- **Memory ingestion** - Direct buffer processing
+- **Format-adaptive** - File paths or base64 data
+- **Multi-instance** - Run multiple databases
+
+</td>
+<td width="50%">
+
+### 🛠️ Production Ready
+- **Content management** - Deduplication, cleanup
+- **Model compatibility** - Auto-detection, rebuilds
+- **Error recovery** - Clear messages, helpful hints
+
+</td>
+</tr>
+</table>
+
+### 📁 Supported File Formats
+
+RAG-lite TS supports the following file formats with full processing implementations:
+
+**Text Mode:**
+- Markdown: `.md`, `.mdx`
+- Plain text: `.txt`
+- Documents: `.pdf`, `.docx`
+
+**Multimodal Mode** (includes all text formats plus):
+- Images: `.jpg`, `.jpeg`, `.png`, `.gif`, `.webp`, `.bmp`
+
+All formats work seamlessly with both single file and directory ingestion:
+
+```bash
+# Single file ingestion
+raglite ingest ./document.pdf
+raglite ingest ./readme.md
+raglite ingest ./notes.txt
+
+# Directory ingestion (processes all supported formats)
+raglite ingest ./docs/
+
+# Multimodal ingestion (includes images)
+raglite ingest ./mixed-content/ --mode multimodal
+```
+
+## 🔧 How It Works
+
+RAG-lite TS follows a clean, efficient pipeline:
+
+```
+📄 Documents → 🧹 Preprocessing → ✂️ Chunking → 🧠 Embedding → 💾 Storage
+                                                                      ↓
+🎯 Results ← 🔄 Reranking ← 🔍 Vector Search ← 🧠 Query Embedding ← ❓ Query
+```
+
+### Pipeline Steps
+
+| Step | What Happens | Technologies |
+|------|--------------|--------------|
+| **1. Ingestion** | Reads `.md`, `.txt`, `.pdf`, `.docx`, images | Native parsers |
+| **2. Preprocessing** | Cleans JSX, Mermaid, code blocks, generates image descriptions | Custom processors |
+| **3. Chunking** | Splits at natural boundaries with token limits | Semantic chunking |
+| **4. Embedding** | Converts text/images to vectors | transformers.js |
+| **5. Storage** | Indexes vectors, stores metadata | hnswlib + SQLite |
+| **6. Search** | Finds similar chunks via cosine similarity | HNSW algorithm |
+| **7. Reranking** | Re-scores results for relevance | Cross-encoder/text-derived |
+
+### 🦎 Chameleon Architecture
+
+The system **automatically adapts** based on your content:
+
+<table>
+<tr>
+<td width="50%">
+
+#### 📝 Text Mode
+```
+Text Docs → Sentence Transformer
+              ↓
+         384D Vectors
+              ↓
+      HNSW Index + SQLite
+              ↓
+    Cross-Encoder Reranking
+```
+
+**Best for:** Documentation, articles, code
+
+</td>
+<td width="50%">
+
+#### 🖼️ Multimodal Mode
+```
+Text + Images → CLIP Embedder
+                    ↓
+              512D Unified Space
+                    ↓
+          HNSW Index + SQLite
+                    ↓
+        Text-Derived Reranking
+```
+
+**Best for:** Mixed content, visual search
+
+</td>
+</tr>
+</table>
+
+**🎯 Key Benefits:**
+- Set mode **once** during ingestion → Auto-detected during search
+- **Cross-modal search** - Text queries find images, image queries find text
+- **No fallback complexity** - Each mode works reliably or fails clearly
+- **Same API** - Your code doesn't change between modes
+
+→ **[Document Preprocessing Guide](docs/preprocessing.md)** | **[Model Management Details](models/README.md)**
+
+## 🧠 Supported Models
+
+Choose the right model for your use case:
+
+### 📝 Text Mode Models
+
+| Model | Dims | Speed | Quality | Best For |
+|-------|------|-------|---------|----------|
+| `sentence-transformers/all-MiniLM-L6-v2` ⭐ | 384 | ⚡⚡⚡ | ⭐⭐⭐ | General purpose (default) |
+| `Xenova/all-mpnet-base-v2` | 768 | ⚡⚡ | ⭐⭐⭐⭐ | Complex queries, higher accuracy |
+
+### 🖼️ Multimodal Models
+
+| Model | Dims | Speed | Quality | Best For |
+|-------|------|-------|---------|----------|
+| `Xenova/clip-vit-base-patch32` ⭐ | 512 | ⚡⚡ | ⭐⭐⭐ | Text + images (default) |
+| `Xenova/clip-vit-base-patch16` | 512 | ⚡ | ⭐⭐⭐⭐ | Higher visual quality |
+
+### ✨ Model Features
+
+- ✅ **Auto-download** - Models cached locally on first use
+- ✅ **Smart compatibility** - Detects model changes, prompts rebuilds
+- ✅ **Offline support** - Pre-download for air-gapped environments
+- ✅ **Zero config** - Works out of the box with sensible defaults
+- ✅ **Cross-modal** - CLIP enables text ↔ image search
+
+→ **[Complete Model Guide](docs/model-guide.md)** | **[Performance Benchmarks](docs/EMBEDDING_MODELS_COMPARISON.md)**
+
+## 📚 Documentation
+
+<table>
+<tr>
+<td width="33%">
+
+### 🚀 Getting Started
+- [CLI Reference](docs/cli-reference.md)
+- [API Reference](docs/api-reference.md)
+- [Multimodal Tutorial](docs/multimodal-tutorial.md)
+- [Unified Content System](docs/unified-content-system.md)
+
+</td>
+<td width="33%">
+
+### 🔧 Advanced
+- [Configuration Guide](docs/configuration.md)
+- [Model Selection](docs/model-guide.md)
+- [Multimodal Config](docs/multimodal-configuration.md)
+- [Path Strategies](docs/path-strategies.md)
+
+</td>
+<td width="33%">
+
+### 🛠️ Support
+- [Troubleshooting](docs/troubleshooting.md)
+- [Multimodal Issues](docs/multimodal-troubleshooting.md)
+- [Content Issues](docs/unified-content-troubleshooting.md)
+- [Benchmarks](docs/EMBEDDING_MODELS_COMPARISON.md)
+
+</td>
+</tr>
+</table>
+
+### 🎯 Quick Start by Role
+
+| I want to... | Start here |
+|--------------|------------|
+| 🆕 Try it out | [CLI Reference](docs/cli-reference.md) → `npm i -g rag-lite-ts` |
+| 🖼️ Search images | [Multimodal Tutorial](docs/multimodal-tutorial.md) → `--mode multimodal` |
+| 💻 Build an app | [API Reference](docs/api-reference.md) → `new SearchEngine()` |
+| 🤖 Integrate with AI | [MCP Guide](docs/mcp-server-multimodal-guide.md) → `raglite-mcp` |
+| ⚡ Optimize performance | [Model Guide](docs/model-guide.md) → Choose your model |
+| 🐛 Fix an issue | [Troubleshooting](docs/troubleshooting.md) → Common solutions |
+
+**📖 [Complete Documentation Hub](docs/README.md)**
+
+## 🔌 MCP Server Integration
+
+**Give your AI agents semantic memory.** RAG-lite TS includes a built-in Model Context Protocol (MCP) server.
+
+```bash
+# Start MCP server (works with Claude, Cline, and other MCP clients)
+raglite-mcp
+```
+
+### Single Instance Configuration
+
+**MCP Configuration:**
+```json
+{
+  "mcpServers": {
+    "rag-lite": {
+      "command": "raglite-mcp",
+      "args": []
+    }
+  }
+}
+```
+
+### Multiple Instance Configuration (NEW)
+
+Run multiple MCP server instances for different databases with **intelligent routing**:
+
+```json
+{
+  "mcpServers": {
+    "rag-lite-text-docs": {
+      "command": "npx",
+      "args": ["rag-lite-mcp"],
+      "env": {
+        "RAG_DB_FILE": "./text-docs/db.sqlite",
+        "RAG_INDEX_FILE": "./text-docs/index.bin"
+      }
+    },
+    "rag-lite-multimodal-images": {
+      "command": "npx",
+      "args": ["rag-lite-mcp"],
+      "env": {
+        "RAG_DB_FILE": "./mixed-content/db.sqlite",
+        "RAG_INDEX_FILE": "./mixed-content/index.bin"
+      }
+    }
+  }
+}
+```
+
+**Dynamic Tool Descriptions:**
+Each server automatically detects and advertises its capabilities:
+- `[TEXT MODE]` - Text-only databases clearly indicate supported file types
+- `[MULTIMODAL MODE]` - Multimodal databases advertise image support and cross-modal search
+- AI assistants can intelligently route queries to the appropriate database
+
+**Available Tools:** `search`, `ingest`, `ingest_image`, `multimodal_search`, `rebuild_index`, `get_stats`, `get_mode_info`, `list_supported_models`, `list_reranking_strategies`, `get_system_stats`
+
+**Multimodal Features:**
+- Search across text and image content
+- Retrieve image content as base64 data
+- Cross-modal search capabilities (text queries find images)
+- Automatic mode detection from database
+- Content type filtering
+- Multiple reranking strategies
+
+→ **[Complete MCP Integration Guide](docs/cli-reference.md#mcp-server)** | **[MCP Multimodal Guide](docs/mcp-server-multimodal-guide.md)** | **[Multi-Instance Setup](docs/mcp-server-multimodal-guide.md#running-multiple-mcp-server-instances)**
+
+---
+
+## 🛠️ Development
+
+### Building from Source
+
+```bash
+# Clone and setup
+git clone https://github.com/your-username/rag-lite-ts.git
+cd rag-lite-ts
+npm install
+
+# Build and link for development
+npm run build
+npm link  # Makes raglite/raglite-mcp available globally
+
+# Run tests
+npm test
+npm run test:integration
+```
+
+### Project Structure
+
+```
+src/
+├── index.ts              # Main exports and factory functions
+├── search.ts             # Public SearchEngine API
+├── ingestion.ts          # Public IngestionPipeline API
+├── core/                 # Model-agnostic core layer
+│   ├── search.ts         # Core search engine
+│   ├── ingestion.ts      # Core ingestion pipeline
+│   ├── db.ts             # SQLite operations
+│   ├── config.ts         # Configuration system
+│   ├── content-manager.ts # Content storage and management
+│   └── types.ts          # Core type definitions
+├── text/                 # Text-specific implementations
+│   ├── embedder.ts       # Sentence-transformer embedder
+│   ├── reranker.ts       # Cross-encoder reranking
+│   └── tokenizer.ts      # Text tokenization
+├── multimodal/           # Multimodal implementations
+│   ├── embedder.ts       # CLIP embedder (text + images)
+│   ├── reranker.ts       # Text-derived reranking for multimodal
+│   ├── image-processor.ts # Image description and metadata
+│   └── content-types.ts  # Content type detection
+├── cli.ts                # CLI interface
+├── mcp-server.ts         # MCP server
+└── preprocessors/        # Content type processors
+
+dist/                     # Compiled output
+```
+
+### Design Philosophy
+
+**Simple by default, powerful when needed:**
+- ✅ Simple constructors work immediately with sensible defaults
+- ✅ Configuration options available when you need customization
+- ✅ Advanced patterns available for complex use cases
+- ✅ Clean architecture with minimal dependencies
+- ✅ No ORMs or heavy frameworks - just TypeScript and SQLite
+- ✅ Extensible design for future capabilities
+
+This approach ensures that basic usage is effortless while providing the flexibility needed for advanced scenarios.
+
+---
+
+## 🤝 Contributing
+
+We welcome contributions! Whether it's:
+
+- 🐛 Bug fixes
+- ✨ New features
+- 📝 Documentation improvements
+- 🧪 Test coverage
+- 💡 Ideas and suggestions
+
+**Guidelines:**
+1. Fork the repository
+2. Create a feature branch (`git checkout -b feature/amazing-feature`)
+3. Make your changes with tests
+4. Ensure all tests pass (`npm test`)
+5. Submit a pull request
+
+We maintain clean architecture principles while enhancing functionality and developer experience.
+
+---
+
+## 🎯 Why We Built This
+
+Existing RAG solutions are either:
+- 🔴 **Too complex** - Require extensive setup and configuration
+- 🔴 **Cloud-dependent** - Need API keys and external services
+- 🔴 **Python-only** - Not ideal for TypeScript/Node.js projects
+- 🔴 **Heavy** - Massive dependencies and slow startup
+
+**RAG-lite TS is different:**
+- ✅ **Simple** - Works out of the box with zero config
+- ✅ **Local-first** - Your data stays on your machine
+- ✅ **TypeScript native** - Built for modern JS/TS projects
+- ✅ **Lightweight** - Fast startup, minimal dependencies
+
+---
+
+## 🙏 Acknowledgments
+
+Built with amazing open-source projects:
+
+- **[transformers.js](https://github.com/xenova/transformers.js)** - Client-side ML models by Xenova
+- **[hnswlib](https://github.com/nmslib/hnswlib)** - Fast approximate nearest neighbor search
+- **[better-sqlite3](https://github.com/WiseLibs/better-sqlite3)** - Fast SQLite3 bindings
+
+---
+
+## 📄 License
+
+MIT License - see [LICENSE](LICENSE) file for details.
+
+---
+
+<div align="center">
+
+**⭐ Star us on GitHub — it helps!**
+
+[Report Bug](https://github.com/your-username/rag-lite-ts/issues) • [Request Feature](https://github.com/your-username/rag-lite-ts/issues) • [Documentation](docs/README.md)
+
+Made with ❤️ by developers, for developers
+
+</div>