quiverdb 0.5.0 → 0.6.1

package/dist/metadata.js

@@ -0,0 +1,100 @@
+import koffi from "koffi";
+import { Database } from "./database.js";
+import { check } from "./errors.js";
+import { allocPtrOut, allocUint64Out, readPtrOut, readUint64Out } from "./ffi-helpers.js";
+import { getSymbols } from "./loader.js";
+const SCALAR_METADATA_SIZE = 56;
+const GROUP_METADATA_SIZE = 32;
+/** Read a string at offset in a struct. Handles the koffi bug where decode(externalPtr, "str") segfaults. */
+function readStrAt(basePtr, offset) {
+    return koffi.decode(basePtr, offset, koffi.array("str", 1))[0];
+}
+function readNullableStrAt(basePtr, offset) {
+    const ptr = koffi.decode(basePtr, offset, "void *");
+    if (!ptr)
+        return null;
+    return readStrAt(basePtr, offset);
+}
+function readScalarMetadataAt(basePtr, byteOffset) {
+    return {
+        name: readStrAt(basePtr, byteOffset),
+        dataType: koffi.decode(basePtr, byteOffset + 8, "int"),
+        notNull: koffi.decode(basePtr, byteOffset + 12, "int") !== 0,
+        primaryKey: koffi.decode(basePtr, byteOffset + 16, "int") !== 0,
+        defaultValue: readNullableStrAt(basePtr, byteOffset + 24),
+        isForeignKey: koffi.decode(basePtr, byteOffset + 32, "int") !== 0,
+        referencesCollection: readNullableStrAt(basePtr, byteOffset + 40),
+        referencesColumn: readNullableStrAt(basePtr, byteOffset + 48),
+    };
+}
+function readGroupMetadataAt(basePtr, byteOffset) {
+    const groupName = readStrAt(basePtr, byteOffset);
+    const dimensionColumn = readNullableStrAt(basePtr, byteOffset + 8);
+    const valueColumnsPtr = koffi.decode(basePtr, byteOffset + 16, "void *");
+    const valueColumnCount = Number(koffi.decode(basePtr, byteOffset + 24, "uint64_t"));
+    const valueColumns = new Array(valueColumnCount);
+    for (let i = 0; i < valueColumnCount; i++) {
+        valueColumns[i] = readScalarMetadataAt(valueColumnsPtr, i * SCALAR_METADATA_SIZE);
+    }
+    return { groupName, dimensionColumn, valueColumns };
+}
+Database.prototype.getScalarMetadata = function (collection, attribute) {
+    const lib = getSymbols();
+    const outBuf = Buffer.alloc(SCALAR_METADATA_SIZE);
+    check(lib.quiver_database_get_scalar_metadata(this._handle, collection, attribute, outBuf));
+    const result = readScalarMetadataAt(outBuf, 0);
+    lib.quiver_database_free_scalar_metadata(outBuf);
+    return result;
+};
+Database.prototype.getVectorMetadata = function (collection, groupName) {
+    const lib = getSymbols();
+    const outBuf = Buffer.alloc(GROUP_METADATA_SIZE);
+    check(lib.quiver_database_get_vector_metadata(this._handle, collection, groupName, outBuf));
+    const result = readGroupMetadataAt(outBuf, 0);
+    lib.quiver_database_free_group_metadata(outBuf);
+    return result;
+};
+Database.prototype.getSetMetadata = function (collection, groupName) {
+    const lib = getSymbols();
+    const outBuf = Buffer.alloc(GROUP_METADATA_SIZE);
+    check(lib.quiver_database_get_set_metadata(this._handle, collection, groupName, outBuf));
+    const result = readGroupMetadataAt(outBuf, 0);
+    lib.quiver_database_free_group_metadata(outBuf);
+    return result;
+};
+Database.prototype.getTimeSeriesMetadata = function (collection, groupName) {
+    const lib = getSymbols();
+    const outBuf = Buffer.alloc(GROUP_METADATA_SIZE);
+    check(lib.quiver_database_get_time_series_metadata(this._handle, collection, groupName, outBuf));
+    const result = readGroupMetadataAt(outBuf, 0);
+    lib.quiver_database_free_group_metadata(outBuf);
+    return result;
+};
+function listMetadata(lib, handle, fn, collection, structSize, reader, freeFn) {
+    const outArray = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, outArray, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const arrPtr = readPtrOut(outArray);
+    const result = new Array(count);
+    for (let i = 0; i < count; i++) {
+        result[i] = reader(arrPtr, i * structSize);
+    }
+    lib[freeFn](arrPtr, count);
+    return result;
+}
+Database.prototype.listScalarAttributes = function (collection) {
+    return listMetadata(getSymbols(), this._handle, "quiver_database_list_scalar_attributes", collection, SCALAR_METADATA_SIZE, readScalarMetadataAt, "quiver_database_free_scalar_metadata_array");
+};
+Database.prototype.listVectorGroups = function (collection) {
+    return listMetadata(getSymbols(), this._handle, "quiver_database_list_vector_groups", collection, GROUP_METADATA_SIZE, readGroupMetadataAt, "quiver_database_free_group_metadata_array");
+};
+Database.prototype.listSetGroups = function (collection) {
+    return listMetadata(getSymbols(), this._handle, "quiver_database_list_set_groups", collection, GROUP_METADATA_SIZE, readGroupMetadataAt, "quiver_database_free_group_metadata_array");
+};
+Database.prototype.listTimeSeriesGroups = function (collection) {
+    return listMetadata(getSymbols(), this._handle, "quiver_database_list_time_series_groups", collection, GROUP_METADATA_SIZE, readGroupMetadataAt, "quiver_database_free_group_metadata_array");
+};
+//# sourceMappingURL=metadata.js.map

package/dist/metadata.js.map

@@ -0,0 +1 @@
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package/dist/query.d.ts

@@ -0,0 +1,9 @@
+import type { QueryParam } from "./types.js";
+declare module "./database.js" {
+    interface Database {
+        queryString(sql: string, params?: QueryParam[]): string | null;
+        queryInteger(sql: string, params?: QueryParam[]): number | null;
+        queryFloat(sql: string, params?: QueryParam[]): number | null;
+    }
+}
+//# sourceMappingURL=query.d.ts.map

package/dist/query.d.ts.map

@@ -0,0 +1 @@
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package/dist/query.js

@@ -0,0 +1,90 @@
+import { Database } from "./database.js";
+import { check } from "./errors.js";
+import { allocNativeFloat64, allocNativeInt64, allocNativeString, allocPtrOut, decodeStringFromBuf, nativeAddress, readPtrOut } from "./ffi-helpers.js";
+import { getSymbols } from "./loader.js";
+const DATA_TYPE_INTEGER = 0;
+const DATA_TYPE_FLOAT = 1;
+const DATA_TYPE_STRING = 2;
+const DATA_TYPE_NULL = 4;
+function marshalParams(params) {
+    const n = params.length;
+    const types = new Int32Array(n);
+    const values = new BigInt64Array(n);
+    const keepalive = [];
+    for (let i = 0; i < n; i++) {
+        const p = params[i];
+        if (p === null) {
+            types[i] = DATA_TYPE_NULL;
+            values[i] = 0n;
+        }
+        else if (typeof p === "number") {
+            if (Number.isInteger(p)) {
+                types[i] = DATA_TYPE_INTEGER;
+                const native = allocNativeInt64([p]);
+                keepalive.push(native);
+                values[i] = nativeAddress(native);
+            }
+            else {
+                types[i] = DATA_TYPE_FLOAT;
+                const native = allocNativeFloat64([p]);
+                keepalive.push(native);
+                values[i] = nativeAddress(native);
+            }
+        }
+        else if (typeof p === "string") {
+            types[i] = DATA_TYPE_STRING;
+            const native = allocNativeString(p);
+            keepalive.push(native);
+            values[i] = nativeAddress(native);
+        }
+    }
+    return { types, values, _keepalive: keepalive };
+}
+Database.prototype.queryString = function (sql, params) {
+    const lib = getSymbols();
+    const outValue = allocPtrOut();
+    const outHasValue = new Int32Array(1);
+    if (params && params.length > 0) {
+        const m = marshalParams(params);
+        check(lib.quiver_database_query_string_params(this._handle, sql, m.types, m.values, params.length, outValue, outHasValue));
+    }
+    else {
+        check(lib.quiver_database_query_string(this._handle, sql, outValue, outHasValue));
+    }
+    if (outHasValue[0] === 0)
+        return null;
+    const result = decodeStringFromBuf(outValue);
+    lib.quiver_database_free_string(readPtrOut(outValue));
+    return result;
+};
+Database.prototype.queryInteger = function (sql, params) {
+    const lib = getSymbols();
+    const outValue = new BigInt64Array(1);
+    const outHasValue = new Int32Array(1);
+    if (params && params.length > 0) {
+        const m = marshalParams(params);
+        check(lib.quiver_database_query_integer_params(this._handle, sql, m.types, m.values, params.length, outValue, outHasValue));
+    }
+    else {
+        check(lib.quiver_database_query_integer(this._handle, sql, outValue, outHasValue));
+    }
+    if (outHasValue[0] === 0)
+        return null;
+    return Number(outValue[0]);
+};
+Database.prototype.queryFloat = function (sql, params) {
+    const lib = getSymbols();
+    const outValue = new Float64Array(1);
+    const outHasValue = new Int32Array(1);
+    if (params && params.length > 0) {
+        const m = marshalParams(params);
+        check(lib.quiver_database_query_float_params(this._handle, sql, m.types, m.values, params.length, outValue, outHasValue));
+    }
+    else {
+        check(lib.quiver_database_query_float(this._handle, sql, outValue, outHasValue));
+    }
+    if (outHasValue[0] === 0)
+        return null;
+    return outValue[0];
+};
+//# sourceMappingURL=query.js.map

package/dist/query.js.map

@@ -0,0 +1 @@
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package/dist/read.d.ts

@@ -0,0 +1,25 @@
+declare module "./database.js" {
+    interface Database {
+        readScalarIntegers(collection: string, attribute: string): number[];
+        readScalarFloats(collection: string, attribute: string): number[];
+        readScalarStrings(collection: string, attribute: string): string[];
+        readScalarIntegerById(collection: string, attribute: string, id: number): number | null;
+        readScalarFloatById(collection: string, attribute: string, id: number): number | null;
+        readScalarStringById(collection: string, attribute: string, id: number): string | null;
+        readElementIds(collection: string): number[];
+        readVectorIntegers(collection: string, attribute: string): number[][];
+        readVectorFloats(collection: string, attribute: string): number[][];
+        readVectorStrings(collection: string, attribute: string): string[][];
+        readVectorIntegersById(collection: string, attribute: string, id: number): number[];
+        readVectorFloatsById(collection: string, attribute: string, id: number): number[];
+        readVectorStringsById(collection: string, attribute: string, id: number): string[];
+        readSetIntegers(collection: string, attribute: string): number[][];
+        readSetFloats(collection: string, attribute: string): number[][];
+        readSetStrings(collection: string, attribute: string): string[][];
+        readSetIntegersById(collection: string, attribute: string, id: number): number[];
+        readSetFloatsById(collection: string, attribute: string, id: number): number[];
+        readSetStringsById(collection: string, attribute: string, id: number): string[];
+    }
+}
+export {};
+//# sourceMappingURL=read.d.ts.map

package/dist/read.d.ts.map

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package/dist/read.js

@@ -0,0 +1,220 @@
+import { Database } from "./database.js";
+import { check } from "./errors.js";
+import { allocPtrOut, allocUint64Out, decodeFloat64Array, decodeInt64Array, decodePtrArray, decodeStringArray, decodeStringFromBuf, decodeUint64Array, readPtrOut, readUint64Out, } from "./ffi-helpers.js";
+import { getSymbols } from "./loader.js";
+// --- Scalar array reads ---
+Database.prototype.readScalarIntegers = function (collection, attribute) {
+    const lib = getSymbols();
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib.quiver_database_read_scalar_integers(this._handle, collection, attribute, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeInt64Array(ptr, count);
+    lib.quiver_database_free_integer_array(ptr);
+    return result;
+};
+Database.prototype.readScalarFloats = function (collection, attribute) {
+    const lib = getSymbols();
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib.quiver_database_read_scalar_floats(this._handle, collection, attribute, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeFloat64Array(ptr, count);
+    lib.quiver_database_free_float_array(ptr);
+    return result;
+};
+Database.prototype.readScalarStrings = function (collection, attribute) {
+    const lib = getSymbols();
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib.quiver_database_read_scalar_strings(this._handle, collection, attribute, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeStringArray(ptr, count);
+    lib.quiver_database_free_string_array(ptr, count);
+    return result;
+};
+// --- Scalar by-ID reads ---
+Database.prototype.readScalarIntegerById = function (collection, attribute, id) {
+    const lib = getSymbols();
+    const outValue = new BigInt64Array(1);
+    const outHasValue = new Int32Array(1);
+    check(lib.quiver_database_read_scalar_integer_by_id(this._handle, collection, attribute, id, outValue, outHasValue));
+    if (outHasValue[0] === 0)
+        return null;
+    return Number(outValue[0]);
+};
+Database.prototype.readScalarFloatById = function (collection, attribute, id) {
+    const lib = getSymbols();
+    const outValue = new Float64Array(1);
+    const outHasValue = new Int32Array(1);
+    check(lib.quiver_database_read_scalar_float_by_id(this._handle, collection, attribute, id, outValue, outHasValue));
+    if (outHasValue[0] === 0)
+        return null;
+    return outValue[0];
+};
+Database.prototype.readScalarStringById = function (collection, attribute, id) {
+    const lib = getSymbols();
+    const outValue = allocPtrOut();
+    const outHasValue = new Int32Array(1);
+    check(lib.quiver_database_read_scalar_string_by_id(this._handle, collection, attribute, id, outValue, outHasValue));
+    if (outHasValue[0] === 0)
+        return null;
+    const result = decodeStringFromBuf(outValue);
+    lib.quiver_database_free_string(readPtrOut(outValue));
+    return result;
+};
+// --- Read element IDs ---
+Database.prototype.readElementIds = function (collection) {
+    const lib = getSymbols();
+    const outIds = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib.quiver_database_read_element_ids(this._handle, collection, outIds, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outIds);
+    const result = decodeInt64Array(ptr, count);
+    lib.quiver_database_free_integer_array(ptr);
+    return result;
+};
+// --- Vector bulk reads ---
+function readBulkIntegers(lib, handle, fn, collection, attribute) {
+    const outVectors = allocPtrOut();
+    const outSizes = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, outVectors, outSizes, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const vectorsPtr = readPtrOut(outVectors);
+    const sizesPtr = readPtrOut(outSizes);
+    const vectorPtrs = decodePtrArray(vectorsPtr, count);
+    const sizes = decodeUint64Array(sizesPtr, count);
+    const result = new Array(count);
+    for (let i = 0; i < count; i++) {
+        result[i] = sizes[i] === 0 ? [] : decodeInt64Array(vectorPtrs[i], sizes[i]);
+    }
+    lib.quiver_database_free_integer_vectors(vectorsPtr, sizesPtr, count);
+    return result;
+}
+function readBulkFloats(lib, handle, fn, collection, attribute) {
+    const outVectors = allocPtrOut();
+    const outSizes = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, outVectors, outSizes, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const vectorsPtr = readPtrOut(outVectors);
+    const sizesPtr = readPtrOut(outSizes);
+    const vectorPtrs = decodePtrArray(vectorsPtr, count);
+    const sizes = decodeUint64Array(sizesPtr, count);
+    const result = new Array(count);
+    for (let i = 0; i < count; i++) {
+        result[i] = sizes[i] === 0 ? [] : decodeFloat64Array(vectorPtrs[i], sizes[i]);
+    }
+    lib.quiver_database_free_float_vectors(vectorsPtr, sizesPtr, count);
+    return result;
+}
+function readBulkStrings(lib, handle, fn, collection, attribute) {
+    const outVectors = allocPtrOut();
+    const outSizes = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, outVectors, outSizes, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const vectorsPtr = readPtrOut(outVectors);
+    const sizesPtr = readPtrOut(outSizes);
+    const vectorPtrs = decodePtrArray(vectorsPtr, count);
+    const sizes = decodeUint64Array(sizesPtr, count);
+    const result = new Array(count);
+    for (let i = 0; i < count; i++) {
+        result[i] = sizes[i] === 0 ? [] : decodeStringArray(vectorPtrs[i], sizes[i]);
+    }
+    lib.quiver_database_free_string_vectors(vectorsPtr, sizesPtr, count);
+    return result;
+}
+Database.prototype.readVectorIntegers = function (collection, attribute) {
+    return readBulkIntegers(getSymbols(), this._handle, "quiver_database_read_vector_integers", collection, attribute);
+};
+Database.prototype.readVectorFloats = function (collection, attribute) {
+    return readBulkFloats(getSymbols(), this._handle, "quiver_database_read_vector_floats", collection, attribute);
+};
+Database.prototype.readVectorStrings = function (collection, attribute) {
+    return readBulkStrings(getSymbols(), this._handle, "quiver_database_read_vector_strings", collection, attribute);
+};
+Database.prototype.readSetIntegers = function (collection, attribute) {
+    return readBulkIntegers(getSymbols(), this._handle, "quiver_database_read_set_integers", collection, attribute);
+};
+Database.prototype.readSetFloats = function (collection, attribute) {
+    return readBulkFloats(getSymbols(), this._handle, "quiver_database_read_set_floats", collection, attribute);
+};
+Database.prototype.readSetStrings = function (collection, attribute) {
+    return readBulkStrings(getSymbols(), this._handle, "quiver_database_read_set_strings", collection, attribute);
+};
+// --- By-ID reads ---
+function readByIdIntegers(lib, handle, fn, collection, attribute, id) {
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, id, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeInt64Array(ptr, count);
+    lib.quiver_database_free_integer_array(ptr);
+    return result;
+}
+function readByIdFloats(lib, handle, fn, collection, attribute, id) {
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, id, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeFloat64Array(ptr, count);
+    lib.quiver_database_free_float_array(ptr);
+    return result;
+}
+function readByIdStrings(lib, handle, fn, collection, attribute, id) {
+    const outValues = allocPtrOut();
+    const outCount = allocUint64Out();
+    check(lib[fn](handle, collection, attribute, id, outValues, outCount));
+    const count = readUint64Out(outCount);
+    if (count === 0)
+        return [];
+    const ptr = readPtrOut(outValues);
+    const result = decodeStringArray(ptr, count);
+    lib.quiver_database_free_string_array(ptr, count);
+    return result;
+}
+Database.prototype.readVectorIntegersById = function (collection, attribute, id) {
+    return readByIdIntegers(getSymbols(), this._handle, "quiver_database_read_vector_integers_by_id", collection, attribute, id);
+};
+Database.prototype.readVectorFloatsById = function (collection, attribute, id) {
+    return readByIdFloats(getSymbols(), this._handle, "quiver_database_read_vector_floats_by_id", collection, attribute, id);
+};
+Database.prototype.readVectorStringsById = function (collection, attribute, id) {
+    return readByIdStrings(getSymbols(), this._handle, "quiver_database_read_vector_strings_by_id", collection, attribute, id);
+};
+Database.prototype.readSetIntegersById = function (collection, attribute, id) {
+    return readByIdIntegers(getSymbols(), this._handle, "quiver_database_read_set_integers_by_id", collection, attribute, id);
+};
+Database.prototype.readSetFloatsById = function (collection, attribute, id) {
+    return readByIdFloats(getSymbols(), this._handle, "quiver_database_read_set_floats_by_id", collection, attribute, id);
+};
+Database.prototype.readSetStringsById = function (collection, attribute, id) {
+    return readByIdStrings(getSymbols(), this._handle, "quiver_database_read_set_strings_by_id", collection, attribute, id);
+};
+//# sourceMappingURL=read.js.map

package/dist/read.js.map

@@ -0,0 +1 @@
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package/dist/time-series.d.ts

@@ -0,0 +1,12 @@
+export type TimeSeriesData = Record<string, (number | string)[]>;
+declare module "./database.js" {
+    interface Database {
+        readTimeSeriesGroup(collection: string, group: string, id: number): TimeSeriesData;
+        updateTimeSeriesGroup(collection: string, group: string, id: number, data: TimeSeriesData): void;
+        hasTimeSeriesFiles(collection: string): boolean;
+        listTimeSeriesFilesColumns(collection: string): string[];
+        readTimeSeriesFiles(collection: string): Record<string, string | null>;
+        updateTimeSeriesFiles(collection: string, data: Record<string, string | null>): void;
+    }
+}
+//# sourceMappingURL=time-series.d.ts.map

package/dist/time-series.d.ts.map

@@ -0,0 +1 @@
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