pulseed 0.6.5 → 0.6.6

package/dist/platform/knowledge/knowledge-graph.d.ts

@@ -1,25 +1,31 @@
 import { type KnowledgeEdge } from "../../base/types/knowledge.js";
-interface KnowledgeGraphNode {
-    entry_id: string;
-    goal_id: string;
-    tags: string[];
-    added_at: string;
+import type { RuntimeControlDbStoreOptions } from "../../runtime/store/control-db/index.js";
+import { KnowledgeGraphNodeSchema, type KnowledgeGraphNode } from "./knowledge-graph-state-store.js";
+export { KnowledgeGraphNodeSchema, type KnowledgeGraphNode };
+export interface KnowledgeGraphOptions extends RuntimeControlDbStoreOptions {
+}
+export interface GraphData {
+    nodes: KnowledgeGraphNode[];
+    edges: KnowledgeEdge[];
 }
 /**
  * KnowledgeGraph stores cross-goal concept relationships as a directed graph.
  * Nodes represent KnowledgeEntry IDs; edges carry typed semantic relations.
  *
- * Persisted as JSON at graphPath: { nodes: [...], edges: [...] }
+ * Persisted as typed control DB rows. Legacy JSON graph files are explicit
+ * doctor/repair import inputs, not runtime fallback state.
  */
 export declare class KnowledgeGraph {
-    private readonly graphPath;
     private nodes;
     private edges;
-    constructor(graphPath: string);
+    private readonly stateStore;
+    constructor(legacyGraphFilePath: string, options?: KnowledgeGraphOptions);
     /**
-     * Factory method: constructs a KnowledgeGraph and loads existing data from disk.
+     * Factory method: constructs a KnowledgeGraph and loads typed store data.
+     * The path argument is retained for compatibility; normal runtime does not read or write it.
      */
-    static create(graphPath: string): Promise<KnowledgeGraph>;
+    static create(legacyGraphFilePath: string, options?: KnowledgeGraphOptions): Promise<KnowledgeGraph>;
+    static createForControlDb(baseDir: string, options?: KnowledgeGraphOptions): Promise<KnowledgeGraph>;
     /**
      * Add a node for a KnowledgeEntry. If a node with the same entry_id already
      * exists, it is replaced (update semantics).
@@ -63,12 +69,11 @@ export declare class KnowledgeGraph {
     detectCycles(): string[][];
     get nodeCount(): number;
     get edgeCount(): number;
-    private save;
     _load(): Promise<void>;
+    close(): Promise<void>;
     /**
      * Remove all nodes and edges and persist the empty state.
      */
     clear(): Promise<void>;
 }
-export {};
 //# sourceMappingURL=knowledge-graph.d.ts.map

package/dist/platform/knowledge/knowledge-graph.d.ts.map

@@ -1 +1 @@
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package/dist/platform/knowledge/knowledge-graph.js

@@ -1,26 +1,36 @@
-import * as fsp from "node:fs/promises";
 import * as path from "node:path";
 import { KnowledgeEdgeSchema } from "../../base/types/knowledge.js";
+import { KnowledgeGraphNodeSchema, KnowledgeGraphStateStore, } from "./knowledge-graph-state-store.js";
+export { KnowledgeGraphNodeSchema };
 /**
  * KnowledgeGraph stores cross-goal concept relationships as a directed graph.
  * Nodes represent KnowledgeEntry IDs; edges carry typed semantic relations.
  *
- * Persisted as JSON at graphPath: { nodes: [...], edges: [...] }
+ * Persisted as typed control DB rows. Legacy JSON graph files are explicit
+ * doctor/repair import inputs, not runtime fallback state.
  */
 export class KnowledgeGraph {
-    graphPath;
     nodes = new Map();
     edges = [];
-    constructor(graphPath) {
-        this.graphPath = graphPath;
-        // Sync loading removed. Use KnowledgeGraph.create() for async load on construction,
-        // or call _load() manually after construction.
+    stateStore;
+    constructor(legacyGraphFilePath, options = {}) {
+        const baseDir = options.controlBaseDir ?? path.dirname(legacyGraphFilePath);
+        this.stateStore = new KnowledgeGraphStateStore(baseDir, options);
     }
     /**
-     * Factory method: constructs a KnowledgeGraph and loads existing data from disk.
+     * Factory method: constructs a KnowledgeGraph and loads typed store data.
+     * The path argument is retained for compatibility; normal runtime does not read or write it.
      */
-    static async create(graphPath) {
-        const graph = new KnowledgeGraph(graphPath);
+    static async create(legacyGraphFilePath, options = {}) {
+        const graph = new KnowledgeGraph(legacyGraphFilePath, options);
+        await graph._load();
+        return graph;
+    }
+    static async createForControlDb(baseDir, options = {}) {
+        const graph = new KnowledgeGraph(path.join(baseDir, "control.sqlite"), {
+            ...options,
+            controlBaseDir: options.controlBaseDir ?? baseDir,
+        });
         await graph._load();
         return graph;
     }
@@ -36,8 +46,9 @@ export class KnowledgeGraph {
             tags: [...tags],
             added_at: new Date().toISOString(),
         };
-        this.nodes.set(entryId, node);
-        await this.save();
+        const parsed = KnowledgeGraphNodeSchema.parse(node);
+        this.nodes.set(entryId, parsed);
+        await this.stateStore.saveNode(parsed);
     }
     /**
      * Remove a node and all edges that reference it.
@@ -47,7 +58,7 @@ export class KnowledgeGraph {
             return;
         this.nodes.delete(entryId);
         this.edges = this.edges.filter((e) => e.from_id !== entryId && e.to_id !== entryId);
-        await this.save();
+        await this.stateStore.removeNode(entryId);
     }
     getNode(entryId) {
         return this.nodes.get(entryId);
@@ -70,7 +81,7 @@ export class KnowledgeGraph {
             created_at: new Date().toISOString(),
         });
         this.edges.push(full);
-        await this.save();
+        await this.stateStore.saveEdge(full);
     }
     /**
      * Remove all edges between fromId and toId (regardless of relation type).
@@ -79,7 +90,7 @@ export class KnowledgeGraph {
         const before = this.edges.length;
         this.edges = this.edges.filter((e) => !(e.from_id === fromId && e.to_id === toId));
         if (this.edges.length !== before) {
-            await this.save();
+            await this.stateStore.removeEdgesBetween(fromId, toId);
         }
     }
     getEdgesFrom(entryId) {
@@ -159,49 +170,29 @@ export class KnowledgeGraph {
         return this.edges.length;
     }
     // ─── Persistence ───
-    async save() {
-        const dir = path.dirname(this.graphPath);
-        await fsp.mkdir(dir, { recursive: true });
-        const data = {
-            nodes: Array.from(this.nodes.values()),
-            edges: this.edges,
-        };
-        const json = JSON.stringify(data, null, 2);
-        const tmpPath = `${this.graphPath}.tmp`;
-        await fsp.writeFile(tmpPath, json, "utf-8");
-        await fsp.rename(tmpPath, this.graphPath);
-    }
     async _load() {
+        this.nodes.clear();
+        this.edges = [];
         try {
-            await fsp.access(this.graphPath);
-        }
-        catch {
-            return;
-        }
-        try {
-            const raw = await fsp.readFile(this.graphPath, "utf-8");
-            const parsed = JSON.parse(raw);
-            this.nodes.clear();
-            this.edges = [];
-            for (const node of parsed.nodes ?? []) {
+            for (const node of await this.stateStore.listNodes()) {
                 this.nodes.set(node.entry_id, node);
             }
-            for (const edge of parsed.edges ?? []) {
-                const validated = KnowledgeEdgeSchema.parse(edge);
-                this.edges.push(validated);
-            }
+            this.edges = await this.stateStore.listEdges();
         }
         catch {
-            // Corrupt or empty file — start fresh
+            // Corrupt typed rows or unavailable store: start with an empty in-memory graph.
         }
     }
+    async close() {
+        await this.stateStore.close();
+    }
     /**
      * Remove all nodes and edges and persist the empty state.
      */
     async clear() {
         this.nodes.clear();
         this.edges = [];
-        await this.save();
+        await this.stateStore.clear();
     }
 }
 //# sourceMappingURL=knowledge-graph.js.map

package/dist/platform/knowledge/knowledge-graph.js.map

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package/dist/platform/knowledge/knowledge-manager-agent-memory.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"knowledge-manager-agent-memory.d.ts","sourceRoot":"","sources":["../../../src/platform/knowledge/knowledge-manager-agent-memory.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,8BAA8B,CAAC;AAC/D,OAAO,EAKL,KAAK,qBAAqB,EAE1B,KAAK,oBAAoB,EACzB,KAAK,yBAAyB,EAC/B,MAAM,4CAA4C,CAAC;AACpD,OAAO,EAA+B,KAAK,qBAAqB,EAAE,MAAM,qCAAqC,CAAC;AAC9G,OAAO,KAAK,EAAE,gBAAgB,EAAE,wBAAwB,EAAE,MAAM,qCAAqC,CAAC;AACtG,OAAO,EAIL,KAAK,qBAAqB,EAC1B,KAAK,iBAAiB,EACvB,MAAM,qCAAqC,CAAC;AAI7C,OAAO,KAAK,EAAE,gBAAgB,EAAqB,gBAAgB,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAEtH,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAC;AAE9D,MAAM,WAAW,eAAe;IAC9B,SAAS,EAAE,UAAU,CAAC;IACtB,eAAe,CAAC,EAAE,gBAAgB,CAAC;IACnC,oBAAoB,IAAI,OAAO,CAAC,gBAAgB,CAAC,CAAC;IAClD,oBAAoB,CAAC,KAAK,EAAE,gBAAgB,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;CAC9D;AAeD,wBAAsB,oBAAoB,CACxC,IAAI,EAAE,eAAe,EACrB,KAAK,EAAE;IACL,GAAG,EAAE,MAAM,CAAC;IACZ,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,EAAE,CAAC;IAChB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,WAAW,CAAC,EAAE,eAAe,CAAC;IAC9B,mBAAmB,CAAC,EAAE,wBAAwB,CAAC;IAC/C,UAAU,CAAC,EAAE,gBAAgB,CAAC;IAC9B,UAAU,CAAC,EAAE,qBAAqB,CAAC;CACpC,GACA,OAAO,CAAC,gBAAgB,CAAC,CAwC3B;AAED,wBAAsB,wBAAwB,CAC5C,IAAI,EAAE,eAAe,EACrB,KAAK,EAAE,MAAM,EACb,IAAI,CAAC,EAAE;IACL,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,WAAW,CAAC,EAAE,eAAe,CAAC;IAC9B,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,gBAAgB,CAAC,EAAE,OAAO,CAAC;IAC3B,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,eAAe,CAAC,EAAE,iBAAiB,CAAC;CACrC,GACA,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAmD7B;AAED,wBAAsB,sBAAsB,CAC1C,IAAI,EAAE,eAAe,EACrB,IAAI,CAAC,EAAE;IACL,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,WAAW,CAAC,EAAE,eAAe,CAAC;IAC9B,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,gBAAgB,CAAC,EAAE,OAAO,CAAC;IAC3B,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,eAAe,CAAC,EAAE,iBAAiB,CAAC;CACrC,GACA,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAe7B;AAED,wBAAsB,sBAAsB,CAAC,IAAI,EAAE,eAAe,EAAE,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAOjG;AAED,MAAM,WAAW,0BAA0B;IACzC,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,qBAAqB,CAAC,QAAQ,CAAC,CAAC;IACzC,UAAU,EAAE,MAAM,CAAC;IACnB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,4BAA4B,CAChD,IAAI,EAAE,eAAe,EACrB,KAAK,EAAE,0BAA0B,GAChC,OAAO,CAAC,MAAM,CAAC,CA6BjB;AAED,MAAM,WAAW,0BAA0B;IACzC,QAAQ,EAAE,MAAM,CAAC;IACjB,cAAc,EAAE,OAAO,CAAC,oBAAoB,EAAE,WAAW,GAAG,WAAW,GAAG,WAAW,CAAC,CAAC;IACvF,MAAM,EAAE,MAAM,CAAC;IACf,gBAAgB,CAAC,EAAE,MAAM,CAAC;IAC1B,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,KAAK,CAAC,EAAE,qBAAqB,CAAC,OAAO,CAAC,CAAC;IACvC,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED,MAAM,WAAW,2BAA2B;IAC1C,UAAU,EAAE,qBAAqB,CAAC;IAClC,MAAM,EAAE,gBAAgB,CAAC;IACzB,WAAW,EAAE,gBAAgB,GAAG,IAAI,CAAC;CACtC;AAoBD,wBAAsB,0BAA0B,CAC9C,IAAI,EAAE,eAAe,EACrB,KAAK,EAAE,0BAA0B,GAChC,OAAO,CAAC,2BAA2B,CAAC,CA0DtC;AAED,wBAAsB,gCAAgC,CACpD,IAAI,EAAE,eAAe,EACrB,MAAM,CAAC,EAAE,yBAAyB,GACjC,OAAO,CAAC,qBAAqB,EAAE,CAAC,CAMlC;AAED,wBAAsB,2BAA2B,CAC/C,IAAI,EAAE,eAAe,EACrB,IAAI,CAAC,EAAE;IACL,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,cAAc,CAAC,EAAE,OAAO,CAAC;CAC1B,GACA,OAAO,CAAC,KAAK,CAAC;IACf,EAAE,EAAE,MAAM,CAAC;IACX,GAAG,EAAE,MAAM,CAAC;IACZ,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,MAAM,EAAE,gBAAgB,CAAC,QAAQ,CAAC,CAAC;IACnC,UAAU,EAAE,gBAAgB,CAAC,YAAY,CAAC,CAAC;IAC3C,UAAU,EAAE,gBAAgB,CAAC,YAAY,CAAC,GAAG,IAAI,CAAC;CACnD,CAAC,CAAC,CAiBF;AAED,wBAAsB,6BAA6B,CACjD,IAAI,EAAE,eAAe,EACrB,IAAI,EAAE;IACJ,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,WAAW,CAAC,EAAE,eAAe,CAAC;IAC9B,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,OAAO,EAAE,CAAC,MAAM,EAAE,MAAM,KAAK,OAAO,CAAC,MAAM,CAAC,CAAC;CAC9C,GACA,OAAO,CAAC;IAAE,QAAQ,EAAE,gBAAgB,EAAE,CAAC;IAAC,QAAQ,EAAE,MAAM,CAAA;CAAE,CAAC,CA+F7D;AAED,wBAAsB,yBAAyB,CAAC,IAAI,EAAE,eAAe,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAkBrG;AAED,wBAAsB,0BAA0B,CAAC,IAAI,EAAE,eAAe,GAAG,OAAO,CAAC;IAC/E,GAAG,EAAE,MAAM,CAAC;IACZ,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC;IACjB,KAAK,EAAE,MAAM,CAAC;CACf,CAAC,CASD;AAED,wBAAsB,0BAA0B,CAC9C,IAAI,EAAE,eAAe,EACrB,IAAI,CAAC,EAAE;IAAE,YAAY,CAAC,EAAE,MAAM,CAAA;CAAE,GAC/B,OAAO,CAAC;IAAE,YAAY,EAAE,OAAO,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,CAa1E"}

package/dist/platform/knowledge/knowledge-manager-agent-memory.js

@@ -165,6 +165,13 @@ function statusForAgentMemoryCorrection(kind) {
         return "forgotten";
     return "retracted";
 }
+function redactsAgentMemoryContentForGovernanceExport(entry) {
+    return entry.governance.export_visibility === "redacted"
+        || entry.status === "forgotten"
+        || entry.status === "retracted"
+        || entry.correction_state?.status === "forgotten"
+        || entry.correction_state?.status === "retracted";
+}
 export async function applyAgentMemoryCorrection(host, input) {
     const store = await host.loadAgentMemoryStore();
     const targetIndex = store.entries.findIndex((entry) => entry.id === input.targetId);
@@ -236,14 +243,17 @@ export async function exportAgentMemoryGovernance(host, opts) {
         .filter((entry) => opts?.include_secret || entry.governance.sensitivity !== "secret")
         .filter((entry) => !opts?.consent_scope || entry.governance.consent.allowed_contexts.includes(opts.consent_scope))
         .filter((entry) => entry.governance.export_visibility !== "hidden")
-        .map((entry) => ({
-        id: entry.id,
-        key: entry.governance.export_visibility === "redacted" ? "[redacted]" : entry.key,
-        summary: entry.governance.export_visibility === "redacted" ? null : entry.summary ?? entry.value,
-        status: entry.status,
-        governance: entry.governance,
-        provenance: entry.provenance ?? null,
-    }));
+        .map((entry) => {
+        const redacted = redactsAgentMemoryContentForGovernanceExport(entry);
+        return {
+            id: entry.id,
+            key: redacted ? "[redacted]" : entry.key,
+            summary: redacted ? null : entry.summary ?? entry.value,
+            status: entry.status,
+            governance: entry.governance,
+            provenance: entry.provenance ?? null,
+        };
+    });
 }
 export async function consolidateAgentMemoryEntries(host, opts) {
     const store = await host.loadAgentMemoryStore();

package/dist/platform/knowledge/knowledge-manager-agent-memory.js.map

@@ -1 +1 @@
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package/dist/platform/knowledge/knowledge-manager-internals.d.ts

@@ -1,9 +1,10 @@
 import type { StateManager } from "../../base/state/state-manager.js";
 import type { DomainKnowledge, SharedKnowledgeEntry } from "../../base/types/knowledge.js";
 import { type AgentMemoryStore } from "./types/agent-memory.js";
-export declare const AGENT_MEMORY_PATH = "memory/agent-memory/entries.json";
-export declare const SHARED_KB_PATH = "memory/shared-knowledge/entries.json";
+import { KnowledgeMemoryStateStore } from "./knowledge-memory-state-store.js";
+export declare function knowledgeMemoryStoreForStateManager(stateManager: StateManager): KnowledgeMemoryStateStore;
 export declare function loadAgentMemoryStore(stateManager: StateManager): Promise<AgentMemoryStore>;
+export declare function saveAgentMemoryStore(stateManager: StateManager, store: AgentMemoryStore): Promise<void>;
 export declare function projectDomainKnowledge(stateManager: StateManager, goalId: string, domainKnowledge: DomainKnowledge): Promise<void>;
 export declare function projectSharedKnowledge(stateManager: StateManager, entries: SharedKnowledgeEntry[]): Promise<void>;
 export declare function projectAgentMemory(stateManager: StateManager, store: AgentMemoryStore): Promise<void>;

package/dist/platform/knowledge/knowledge-manager-internals.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"knowledge-manager-internals.d.ts","sourceRoot":"","sources":["../../../src/platform/knowledge/knowledge-manager-internals.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,mCAAmC,CAAC;AACtE,OAAO,KAAK,EAAE,eAAe,EAAE,oBAAoB,EAAE,MAAM,+BAA+B,CAAC;AAO3F,OAAO,EAEL,KAAK,gBAAgB,EACtB,MAAM,yBAAyB,CAAC;AACjC,OAAO,EAAE,yBAAyB,EAAE,MAAM,mCAAmC,CAAC;AAE9E,wBAAgB,mCAAmC,CAAC,YAAY,EAAE,YAAY,GAAG,yBAAyB,CAEzG;AAED,wBAAsB,oBAAoB,CAAC,YAAY,EAAE,YAAY,GAAG,OAAO,CAAC,gBAAgB,CAAC,CAIhG;AAED,wBAAsB,oBAAoB,CAAC,YAAY,EAAE,YAAY,EAAE,KAAK,EAAE,gBAAgB,GAAG,OAAO,CAAC,IAAI,CAAC,CAE7G;AAED,wBAAsB,sBAAsB,CAAC,YAAY,EAAE,YAAY,EAAE,MAAM,EAAE,MAAM,EAAE,eAAe,EAAE,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CAUxI;AAED,wBAAsB,sBAAsB,CAAC,YAAY,EAAE,YAAY,EAAE,OAAO,EAAE,oBAAoB,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAUvH;AAED,wBAAsB,kBAAkB,CAAC,YAAY,EAAE,YAAY,EAAE,KAAK,EAAE,gBAAgB,GAAG,OAAO,CAAC,IAAI,CAAC,CAU3G"}

package/dist/platform/knowledge/knowledge-manager-internals.js

@@ -1,14 +1,15 @@
 import * as path from "node:path";
 import { projectAgentMemoryToSoil, projectDomainKnowledgeToSoil, projectSharedKnowledgeToSoil, rebuildSoilIndex, } from "../soil/index.js";
 import { AgentMemoryStoreSchema, } from "./types/agent-memory.js";
-export const AGENT_MEMORY_PATH = "memory/agent-memory/entries.json";
-export const SHARED_KB_PATH = "memory/shared-knowledge/entries.json";
+import { KnowledgeMemoryStateStore } from "./knowledge-memory-state-store.js";
+export function knowledgeMemoryStoreForStateManager(stateManager) {
+    return new KnowledgeMemoryStateStore(stateManager.getBaseDir());
+}
 export async function loadAgentMemoryStore(stateManager) {
-    const raw = await stateManager.readRaw(AGENT_MEMORY_PATH);
-    if (!raw) {
-        return AgentMemoryStoreSchema.parse({ entries: [], last_consolidated_at: null });
-    }
-    return AgentMemoryStoreSchema.parse(raw);
+    return AgentMemoryStoreSchema.parse(await knowledgeMemoryStoreForStateManager(stateManager).loadAgentMemoryStore());
+}
+export async function saveAgentMemoryStore(stateManager, store) {
+    await knowledgeMemoryStoreForStateManager(stateManager).saveAgentMemoryStore(store);
 }
 export async function projectDomainKnowledge(stateManager, goalId, domainKnowledge) {
     try {

package/dist/platform/knowledge/knowledge-manager-internals.js.map

@@ -1 +1 @@
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package/dist/platform/knowledge/knowledge-manager-query.js

@@ -202,8 +202,8 @@ ${questions.map((q, i) => `${i + 1}. ${q}`).join("\n")}`,
         status: "pending",
         created_at: now,
     });
-    // Persist
-    await stateManager.writeRaw(`tasks/${goalId}/${taskId}.json`, task);
+    // Persist through the typed task store.
+    await stateManager.saveTask(task);
     return task;
 }
 // ─── checkContradiction ───

package/dist/platform/knowledge/knowledge-manager-query.js.map

@@ -1 +1 @@
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+{"version":3,"file":"knowledge-manager-query.js","sourceRoot":"","sources":["../../../src/platform/knowledge/knowledge-manager-query.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AACzC,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAKxB,OAAO,EAAE,UAAU,EAAE,MAAM,0BAA0B,CAAC;AAEtD,OAAO,EACL,wBAAwB,EACxB,yBAAyB,GAC1B,MAAM,+BAA+B,CAAC;AAMvC,OAAO,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAW5D,+BAA+B;AAE/B,MAAM,CAAC,MAAM,0BAA0B,GAAG,CAAC,CAAC,MAAM,CAAC;IACjD,OAAO,EAAE,CAAC,CAAC,OAAO,EAAE;IACpB,WAAW,EAAE,CAAC;SACX,IAAI,CAAC;QACJ,2BAA2B;QAC3B,mBAAmB;QACnB,2BAA2B;QAC3B,YAAY;QACZ,sBAAsB;KACvB,CAAC;SACD,QAAQ,EAAE;IACb,iBAAiB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE;IACxC,WAAW,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE;IAClC,iBAAiB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,EAAE;CACpD,CAAC,CAAC;AAEH,MAAM,CAAC,MAAM,2BAA2B,GAAG,CAAC,CAAC,MAAM,CAAC;IAClD,gBAAgB,EAAE,CAAC,CAAC,MAAM,EAAE;IAC5B,mEAAmE;IACnE,mBAAmB,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;IAC/C,QAAQ,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;IAC7B,YAAY,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;CAClC,CAAC,CAAC;AAEH,MAAM,CAAC,MAAM,gCAAgC,GAAG,CAAC,CAAC,MAAM,CAAC;IACvD,iBAAiB,EAAE,CAAC,CAAC,OAAO,EAAE;IAC9B,oBAAoB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;IACzD,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;CAChD,CAAC,CAAC;AAEH,6BAA6B;AAE7B;;;;;;;;GAQG;AACH,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACtC,IAAwB,EACxB,OAIC;IAED,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,GAAG,IAAI,CAAC;IAEpC,wDAAwD;IACxD,IAAI,OAAO,CAAC,UAAU,GAAG,GAAG,EAAE,CAAC;QAC7B,OAAO,wBAAwB,CAAC,KAAK,CAAC;YACpC,WAAW,EAAE,2BAA2B;YACxC,iBAAiB,EACf,iEAAiE;YACnE,WAAW,EAAE,iBAAiB;YAC9B,iBAAiB,EAAE,IAAI;SACxB,CAAC,CAAC;IACL,CAAC;IAED,+FAA+F;IAC/F,gFAAgF;IAChF,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI,OAAO,CAAC,UAAU,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzE,OAAO,wBAAwB,CAAC,KAAK,CAAC;YACpC,WAAW,EAAE,mBAAmB;YAChC,iBAAiB,EACf,0EAA0E;YAC5E,WAAW,EAAE,oBAAoB;YACjC,iBAAiB,EAAE,IAAI;SACxB,CAAC,CAAC;IACL,CAAC;IAED,2CAA2C;IAC3C,MAAM,MAAM,GAAG;;gBAED,OAAO,CAAC,YAAY,CAAC,MAAM,YAAY,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC;cAC3F,CAAC,OAAO,CAAC,UAAU,IAAI,EAAE,CAAC,CAAC,MAAM,YAAY,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,UAAU,IAAI,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC;cACnG,OAAO,CAAC,UAAU;;;;;;;;;EAS9B,CAAC;IAED,IAAI,MAAkD,CAAC;IACvD,IAAI,OAAO,EAAE,CAAC;QACZ,IAAI,CAAC;YACH,MAAM,GAAG,MAAM,OAAO,CAAC,OAAO,CAAC;gBAC7B,OAAO,EAAE,yBAAyB;gBAClC,iBAAiB,EAAE,EAAE,oBAAoB,EAAE,MAAM,EAAE;gBACnD,cAAc,EAAE,0BAA0B;gBAC1C,SAAS,EAAE,GAAG;aACf,CAAC,CAAC;QACL,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,IAAI,CAAC;QACd,CAAC;IACH,CAAC;SAAM,CAAC;QACN,MAAM,QAAQ,GAAG,MAAM,SAAS,CAAC,WAAW,CAC1C,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,CAAC,EACnC;YACE,MAAM,EACJ,kHAAkH;YACpH,UAAU,EAAE,GAAG;SAChB,CACF,CAAC;QAEF,IAAI,CAAC;YACH,MAAM,GAAG,SAAS,CAAC,SAAS,CAAC,QAAQ,CAAC,OAAO,EAAE,0BAA0B,CAAC,CAAC;QAC7E,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,IAAI,CAAC;QACd,CAAC;IACH,CAAC;IAED,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;QACpB,OAAO,IAAI,CAAC;IACd,CAAC;IAED,OAAO,wBAAwB,CAAC,KAAK,CAAC;QACpC,WAAW,EAAE,MAAM,CAAC,WAAW,IAAI,2BAA2B;QAC9D,iBAAiB,EACf,MAAM,CAAC,iBAAiB,IAAI,oCAAoC;QAClE,WAAW,EAAE,MAAM,CAAC,WAAW,IAAI,iBAAiB;QACpD,iBAAiB,EAAE,MAAM,CAAC,iBAAiB,IAAI,IAAI;KACpD,CAAC,CAAC;AACL,CAAC;AAED,kCAAkC;AAElC;;;;GAIG;AACH,MAAM,CAAC,KAAK,UAAU,uBAAuB,CAC3C,IAAwB,EACxB,MAA0B,EAC1B,MAAc;IAEd,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,IAAI,CAAC;IAElD,MAAM,MAAM,GAAG;;WAEN,MAAM;;UAEP,MAAM,CAAC,WAAW;uBACL,MAAM,CAAC,iBAAiB;iBAC9B,MAAM,CAAC,WAAW;uBACZ,MAAM,CAAC,iBAAiB,IAAI,MAAM;;;;;;;;;;;EAWvD,CAAC;IAED,IAAI,MAAmD,CAAC;IACxD,IAAI,OAAO,EAAE,CAAC;QACZ,MAAM,GAAG,MAAM,OAAO,CAAC,OAAO,CAAC;YAC7B,OAAO,EAAE,uBAAuB;YAChC,MAAM;YACN,iBAAiB,EAAE,EAAE,kBAAkB,EAAE,MAAM,EAAE;YACjD,cAAc,EAAE,2BAA2B;YAC3C,SAAS,EAAE,IAAI;SAChB,CAAC,CAAC;IACL,CAAC;SAAM,CAAC;QACN,MAAM,QAAQ,GAAG,MAAM,SAAS,CAAC,WAAW,CAC1C,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,CAAC,EACnC;YACE,MAAM,EACJ,4GAA4G;YAC9G,UAAU,EAAE,IAAI;SACjB,CACF,CAAC;QAEF,MAAM,GAAG,SAAS,CAAC,SAAS,CAAC,QAAQ,CAAC,OAAO,EAAE,2BAA2B,CAAC,CAAC;IAC9E,CAAC;IAED,yBAAyB;IACzB,MAAM,SAAS,GAAG,MAAM,CAAC,mBAAmB,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAEzD,MAAM,MAAM,GAAG,UAAU,EAAE,CAAC;IAC5B,MAAM,GAAG,GAAG,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC;IAErC,MAAM,mBAAmB,GAAG,OAAO,SAAS,CAAC,MAAM,wDAAwD,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;IAElI,MAAM,IAAI,GAAG,UAAU,CAAC,KAAK,CAAC;QAC5B,EAAE,EAAE,MAAM;QACV,OAAO,EAAE,MAAM;QACf,WAAW,EAAE,IAAI;QACjB,iBAAiB,EAAE,MAAM,CAAC,iBAAiB;YACzC,CAAC,CAAC,CAAC,MAAM,CAAC,iBAAiB,CAAC;YAC5B,CAAC,CAAC,EAAE;QACN,iBAAiB,EAAE,MAAM,CAAC,iBAAiB,IAAI,WAAW;QAC1D,gBAAgB,EAAE,kBAAkB,MAAM,CAAC,gBAAgB,EAAE;QAC7D,SAAS,EAAE,2BAA2B,MAAM,CAAC,WAAW,MAAM,MAAM,CAAC,iBAAiB,EAAE;QACxF,QAAQ,EAAE;EACZ,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,GAAG,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE;QACpD,gBAAgB,EAAE;YAChB;gBACE,WAAW,EAAE,mBAAmB;gBAChC,mBAAmB,EACjB,4DAA4D;gBAC9D,WAAW,EAAE,IAAI;aAClB;SACF;QACD,cAAc,EAAE;YACd,QAAQ,EAAE,CAAC,wBAAwB,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package/dist/platform/knowledge/knowledge-manager-store.js

@@ -1,7 +1,7 @@
 import { KnowledgeEntrySchema, DomainKnowledgeSchema, SharedKnowledgeEntrySchema, } from "../../base/types/knowledge.js";
 import { computeRevalidationDue } from "./knowledge-revalidation.js";
 import { loadSharedEntries } from "./knowledge-search.js";
-import { SHARED_KB_PATH } from "./knowledge-manager-internals.js";
+import { knowledgeMemoryStoreForStateManager } from "./knowledge-manager-internals.js";
 export async function saveDomainKnowledgeEntry(host, goalId, entry) {
     const parsed = KnowledgeEntrySchema.parse(entry);
     const domainKnowledge = await host.loadDomainKnowledge(goalId);
@@ -12,7 +12,7 @@ export async function saveDomainKnowledgeEntry(host, goalId, entry) {
         await host.vectorIndex.add(parsed.entry_id, `${parsed.question} ${parsed.answer}`, { goal_id: goalId, tags: parsed.tags });
     }
     try {
-        await host.stateManager.writeRaw(`goals/${goalId}/domain_knowledge.json`, validated);
+        await knowledgeMemoryStoreForStateManager(host.stateManager).saveDomainKnowledge(validated);
         await host.projectDomainKnowledge(goalId, validated);
     }
     catch (err) {
@@ -60,7 +60,7 @@ export async function saveSharedKnowledgeEntry(host, entry, goalId, defaultStabi
         const targetIdx = existingIdx >= 0 ? existingIdx : all.length - 1;
         all[targetIdx] = merged;
     }
-    await host.stateManager.writeRaw(SHARED_KB_PATH, all);
+    await knowledgeMemoryStoreForStateManager(host.stateManager).saveSharedKnowledgeEntries(all);
     await host.projectSharedKnowledge(all);
     return merged;
 }

package/dist/platform/knowledge/knowledge-manager-store.js.map

@@ -1 +1 @@
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package/dist/platform/knowledge/knowledge-manager.d.ts

@@ -19,9 +19,10 @@ export * from "./public-api.js";
  * KnowledgeManager detects knowledge gaps, generates research tasks,
  * and persists/retrieves domain knowledge entries.
  *
- * File layout:
- *   <base>/goals/<goal_id>/domain_knowledge.json
- *   <base>/memory/shared-knowledge/entries.json  (Phase 2 shared KB)
+ * Durable state layout:
+ *   Soil SQLite records own domain knowledge, shared knowledge, and agent memory.
+ *   Legacy JSON knowledge/memory files are explicit doctor/migration inputs only;
+ *   normal runtime callers use KnowledgeMemoryStateStore directly.
  */
 export declare class KnowledgeManager {
     private readonly stateManager;
@@ -36,9 +37,6 @@ export declare class KnowledgeManager {
         confidence: number;
     }): Promise<KnowledgeGapSignal | null>;
     generateAcquisitionTask(signal: KnowledgeGapSignal, goalId: string): Promise<Task>;
-    /**
-     * Persist a KnowledgeEntry to ~/.pulseed/goals/<goal_id>/domain_knowledge.json
-     */
     saveKnowledge(goalId: string, entry: KnowledgeEntry): Promise<void>;
     /**
      * Load knowledge entries for a goal, optionally filtered by tags (exact match).
@@ -59,6 +57,7 @@ export declare class KnowledgeManager {
      */
     searchKnowledge(query: string, topK?: number, options?: {
         relationshipProfileContext?: RelationshipProfileRetrievalContext;
+        relationshipProfilePromptContext?: string;
     }): Promise<KnowledgeEntry[]>;
     private relationshipProfileContextToKnowledgeEntries;
     /**

package/dist/platform/knowledge/knowledge-manager.d.ts.map

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