pulseed 0.5.3 → 0.5.4

package/dist/platform/soil/retriever.d.ts

@@ -18,20 +18,44 @@ export interface SoilQueryHit {
     frontmatter: SoilPageFrontmatter;
     snippet: string;
 }
+export interface SoilScanStats {
+    rootDir: string;
+    scannedDirs: number;
+    matchedFiles: number;
+    maxFiles: number;
+    maxDepth: number;
+    deadlineMs: number;
+    truncated: boolean;
+    reason?: "max_files" | "max_depth" | "deadline";
+}
+export interface SoilScanOptions {
+    maxFiles?: number;
+    maxDepth?: number;
+    deadlineMs?: number;
+    ignoredDirectoryNames?: readonly string[];
+}
 export interface SoilPageStore {
     listMarkdownFiles(rootDir: string): Promise<string[]>;
     readMarkdownFile(filePath: string): Promise<string>;
+    getLastScanStats?(): SoilScanStats | null;
 }
 export declare class FileSoilPageStore implements SoilPageStore {
+    private readonly options;
+    private lastScanStats;
+    constructor(options?: SoilScanOptions);
     listMarkdownFiles(rootDir: string): Promise<string[]>;
     readMarkdownFile(filePath: string): Promise<string>;
+    getLastScanStats(): SoilScanStats | null;
     private walk;
+    private shouldStop;
+    private markTruncated;
 }
 export interface SoilManifest {
     rootDir: string;
     pages: SoilPageRecord[];
     bySoilId: Map<string, SoilPageRecord[]>;
     byRelativePath: Map<string, SoilPageRecord>;
+    scan?: SoilScanStats;
 }
 export declare function loadSoilManifest(configInput?: SoilConfigInput, store?: SoilPageStore): Promise<SoilManifest>;
 export declare class SoilRetriever {
@@ -43,6 +67,7 @@ export declare class SoilRetriever {
     refresh(): Promise<SoilManifest>;
     getManifest(): Promise<SoilManifest>;
     list(): Promise<SoilPageRecord[]>;
+    getLastScanStats(): SoilScanStats | null;
     getBySoilId(soilId: string): Promise<SoilPageRecord | null>;
     getByPath(input: string): Promise<SoilPageRecord | null>;
     query(query: string, limit?: number): Promise<SoilQueryHit[]>;

package/dist/platform/soil/retriever.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"retriever.d.ts","sourceRoot":"","sources":["../../../src/platform/soil/retriever.ts"],"names":[],"mappings":"AAGA,OAAO,EAA6B,KAAK,mBAAmB,EAAE,MAAM,YAAY,CAAC;AACjF,OAAO,EAEL,KAAK,UAAU,EACf,KAAK,eAAe,EACrB,MAAM,aAAa,CAAC;AASrB,MAAM,WAAW,cAAc;IAC7B,MAAM,EAAE,MAAM,CAAC;IACf,YAAY,EAAE,MAAM,CAAC;IACrB,YAAY,EAAE,MAAM,CAAC;IACrB,WAAW,EAAE,mBAAmB,CAAC;IACjC,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,YAAY,EAAE,MAAM,CAAC;IACrB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,YAAY;IAC3B,MAAM,EAAE,MAAM,CAAC;IACf,YAAY,EAAE,MAAM,CAAC;IACrB,YAAY,EAAE,MAAM,CAAC;IACrB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,mBAAmB,CAAC;IACjC,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,aAAa;IAC5B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,EAAE,MAAM,CAAC;IACrB,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,OAAO,CAAC;IACnB,MAAM,CAAC,EAAE,WAAW,GAAG,WAAW,GAAG,UAAU,CAAC;CACjD;AAED,MAAM,WAAW,eAAe;IAC9B,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,qBAAqB,CAAC,EAAE,SAAS,MAAM,EAAE,CAAC;CAC3C;AAED,MAAM,WAAW,aAAa;IAC5B,iBAAiB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC;IACtD,gBAAgB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAAC;IACpD,gBAAgB,CAAC,IAAI,aAAa,GAAG,IAAI,CAAC;CAC3C;AAuBD,qBAAa,iBAAkB,YAAW,aAAa;IACrD,OAAO,CAAC,QAAQ,CAAC,OAAO,CAA4B;IACpD,OAAO,CAAC,aAAa,CAA8B;gBAEvC,OAAO,GAAE,eAAoB;IASnC,iBAAiB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;IAoBrD,gBAAgB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IAIzD,gBAAgB,IAAI,aAAa,GAAG,IAAI;YAI1B,IAAI;IAgClB,OAAO,CAAC,UAAU;IAYlB,OAAO,CAAC,aAAa;CAYtB;AAED,MAAM,WAAW,YAAY;IAC3B,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,EAAE,cAAc,EAAE,CAAC;IACxB,QAAQ,EAAE,GAAG,CAAC,MAAM,EAAE,cAAc,EAAE,CAAC,CAAC;IACxC,cAAc,EAAE,GAAG,CAAC,MAAM,EAAE,cAAc,CAAC,CAAC;IAC5C,IAAI,CAAC,EAAE,aAAa,CAAC;CACtB;AAED,wBAAsB,gBAAgB,CACpC,WAAW,GAAE,eAAoB,EACjC,KAAK,GAAE,aAAuC,GAC7C,OAAO,CAAC,YAAY,CAAC,CA8CvB;AAgHD,qBAAa,aAAa;IAItB,OAAO,CAAC,QAAQ,CAAC,MAAM;IACvB,OAAO,CAAC,QAAQ,CAAC,KAAK;IAJxB,OAAO,CAAC,QAAQ,CAA6B;gBAG1B,MAAM,EAAE,UAAU,EAClB,KAAK,GAAE,aAAuC;IAGjE,MAAM,CAAC,MAAM,CAAC,WAAW,GAAE,eAAoB,EAAE,KAAK,CAAC,EAAE,aAAa,GAAG,aAAa;IAIhF,OAAO,IAAI,OAAO,CAAC,YAAY,CAAC;IAKhC,WAAW,IAAI,OAAO,CAAC,YAAY,CAAC;IAIpC,IAAI,IAAI,OAAO,CAAC,cAAc,EAAE,CAAC;IAKvC,gBAAgB,IAAI,aAAa,GAAG,IAAI;IAIlC,WAAW,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,GAAG,IAAI,CAAC;IAM3D,SAAS,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,GAAG,IAAI,CAAC;IAMxD,KAAK,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,SAAK,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;IA+B/D,OAAO,CAAC,mBAAmB;CAM5B;AAUD,wBAAgB,iBAAiB,CAAC,MAAM,EAAE,MAAM,EAAE,YAAY,EAAE,MAAM,GAAG,OAAO,CAE/E"}

package/dist/platform/soil/retriever.js

@@ -4,31 +4,116 @@ import { splitSoilFrontmatter } from "./frontmatter.js";
 import { SoilPageFrontmatterSchema } from "./types.js";
 import { createSoilConfig, } from "./config.js";
 import { normalizeSoilId, normalizeSoilRelativePath, soilIdToRelativePath, soilPageRelativePathFromAbsolute, } from "./paths.js";
+const DEFAULT_SOIL_SCAN_OPTIONS = {
+    maxFiles: 500,
+    maxDepth: 8,
+    deadlineMs: 5_000,
+    ignoredDirectoryNames: [
+        "node_modules",
+        "dist",
+        "build",
+        "coverage",
+        "tmp",
+        "temp",
+        "vendor",
+        "Library",
+        "Applications",
+        "Downloads",
+        "Movies",
+        "Music",
+        "Pictures",
+    ],
+};
 export class FileSoilPageStore {
+    options;
+    lastScanStats = null;
+    constructor(options = {}) {
+        this.options = {
+            maxFiles: options.maxFiles ?? DEFAULT_SOIL_SCAN_OPTIONS.maxFiles,
+            maxDepth: options.maxDepth ?? DEFAULT_SOIL_SCAN_OPTIONS.maxDepth,
+            deadlineMs: options.deadlineMs ?? DEFAULT_SOIL_SCAN_OPTIONS.deadlineMs,
+            ignoredDirectoryNames: options.ignoredDirectoryNames ?? DEFAULT_SOIL_SCAN_OPTIONS.ignoredDirectoryNames,
+        };
+    }
     async listMarkdownFiles(rootDir) {
         const files = [];
-        await this.walk(rootDir, files);
+        const resolvedRoot = path.resolve(rootDir);
+        const startedAt = Date.now();
+        this.lastScanStats = {
+            rootDir: resolvedRoot,
+            scannedDirs: 0,
+            matchedFiles: 0,
+            maxFiles: this.options.maxFiles,
+            maxDepth: this.options.maxDepth,
+            deadlineMs: this.options.deadlineMs,
+            truncated: false,
+        };
+        await this.walk(resolvedRoot, files, 0, startedAt + this.options.deadlineMs);
+        if (this.lastScanStats) {
+            this.lastScanStats.matchedFiles = files.length;
+        }
         return files;
     }
     async readMarkdownFile(filePath) {
         return fsp.readFile(filePath, "utf-8");
     }
-    async walk(dir, files) {
+    getLastScanStats() {
+        return this.lastScanStats;
+    }
+    async walk(dir, files, depth, deadlineAt) {
+        if (this.shouldStop(files, deadlineAt)) {
+            return;
+        }
+        if (depth > this.options.maxDepth) {
+            this.markTruncated("max_depth");
+            return;
+        }
+        this.lastScanStats.scannedDirs += 1;
         const entries = await fsp.readdir(dir, { withFileTypes: true }).catch(() => []);
         for (const entry of entries) {
-            if (entry.name.startsWith(".")) {
+            if (this.shouldStop(files, deadlineAt)) {
+                return;
+            }
+            if (entry.name.startsWith(".") || this.options.ignoredDirectoryNames.includes(entry.name)) {
                 continue;
             }
             const fullPath = path.join(dir, entry.name);
             if (entry.isDirectory()) {
-                await this.walk(fullPath, files);
+                await this.walk(fullPath, files, depth + 1, deadlineAt);
                 continue;
             }
             if (entry.isFile() && entry.name.endsWith(".md")) {
                 files.push(fullPath);
+                if (files.length >= this.options.maxFiles) {
+                    this.markTruncated("max_files");
+                    return;
+                }
             }
         }
     }
+    shouldStop(files, deadlineAt) {
+        if (files.length >= this.options.maxFiles) {
+            this.markTruncated("max_files");
+            return true;
+        }
+        if (Date.now() >= deadlineAt) {
+            this.markTruncated("deadline");
+            return true;
+        }
+        return false;
+    }
+    markTruncated(reason) {
+        if (!this.lastScanStats) {
+            return;
+        }
+        if (!this.lastScanStats.truncated) {
+            this.lastScanStats = {
+                ...this.lastScanStats,
+                truncated: true,
+                ...(reason ? { reason } : {}),
+            };
+        }
+    }
 }
 export async function loadSoilManifest(configInput = {}, store = new FileSoilPageStore()) {
     const config = createSoilConfig(configInput);
@@ -73,7 +158,8 @@ export async function loadSoilManifest(configInput = {}, store = new FileSoilPag
         bySoilId.set(soilId, soilRecords);
         byRelativePath.set(relativePath, record);
     }
-    return { rootDir: config.rootDir, pages, bySoilId, byRelativePath };
+    const scan = store.getLastScanStats?.() ?? undefined;
+    return { rootDir: config.rootDir, pages, bySoilId, byRelativePath, ...(scan ? { scan } : {}) };
 }
 function buildSearchText(frontmatter, body) {
     return [
@@ -202,6 +288,9 @@ export class SoilRetriever {
         const manifest = await this.getManifest();
         return [...manifest.pages];
     }
+    getLastScanStats() {
+        return this.manifest?.scan ?? this.store.getLastScanStats?.() ?? null;
+    }
     async getBySoilId(soilId) {
         const manifest = await this.getManifest();
         const records = manifest.bySoilId.get(normalizeSoilId(soilId));

package/dist/platform/soil/retriever.js.map

@@ -1 +1 @@
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package/dist/platform/soil/sqlite-repository-helpers.d.ts

@@ -0,0 +1,80 @@
+import type Database from "better-sqlite3";
+import { type SoilCandidate, type SoilEmbedding, type SoilPage, type SoilPageMember, type SoilRecord } from "./contracts.js";
+export type SqliteDatabase = Database.Database;
+export interface SoilRowRecord {
+    record_id: string;
+    record_key: string;
+    version: number;
+    record_type: string;
+    soil_id: string;
+    title: string;
+    summary: string | null;
+    canonical_text: string;
+    goal_id: string | null;
+    task_id: string | null;
+    status: string;
+    confidence: number | null;
+    importance: number | null;
+    source_reliability: number | null;
+    valid_from: string | null;
+    valid_to: string | null;
+    supersedes_record_id: string | null;
+    is_active: number;
+    source_type: string;
+    source_id: string;
+    metadata_json: string;
+    created_at: string;
+    updated_at: string;
+}
+export interface SoilRowChunk {
+    chunk_id: string;
+    record_id: string;
+    soil_id: string;
+    chunk_index: number;
+    chunk_kind: string;
+    heading_path_json: string;
+    chunk_text: string;
+    token_count: number;
+    checksum: string;
+    created_at: string;
+}
+export interface SoilRowPage {
+    page_id: string;
+    soil_id: string;
+    relative_path: string;
+    route: string;
+    kind: string;
+    status: string;
+    markdown: string;
+    checksum: string;
+    projected_at: string;
+}
+export interface SoilRowPageMember {
+    page_id: string;
+    record_id: string;
+    ordinal: number;
+    role: string;
+    confidence: number | null;
+}
+export interface SoilRowEmbedding {
+    chunk_id: string;
+    model: string;
+    embedding_version: number;
+    encoding: string;
+    embedding: Buffer;
+    embedded_at: string;
+}
+export declare function buildSnippet(text: string, query: string): string;
+export declare function serializeJson(value: unknown): string;
+export declare function parseJsonObject(input: string): Record<string, unknown>;
+export declare function parseJsonArray(input: string): string[];
+export declare function parseReindexRecordIds(input: string): string[];
+export declare function encodeEmbedding(entry: SoilEmbedding): Buffer;
+export declare function decodeEmbedding(row: SoilRowEmbedding): number[];
+export declare function toRecord(row: SoilRowRecord): SoilRecord;
+export declare function toPage(row: SoilRowPage): SoilPage;
+export declare function toPageMember(row: SoilRowPageMember): SoilPageMember;
+export declare function unique(values: string[]): string[];
+export declare function dedupeCandidates(candidates: SoilCandidate[], limit: number): SoilCandidate[];
+export declare function fuseCandidates(lexical: SoilCandidate[], dense: SoilCandidate[], limit: number, rrfK?: number): SoilCandidate[];
+//# sourceMappingURL=sqlite-repository-helpers.d.ts.map

package/dist/platform/soil/sqlite-repository-helpers.d.ts.map

@@ -0,0 +1 @@
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package/dist/platform/soil/sqlite-repository-helpers.js

@@ -0,0 +1,143 @@
+import { SoilPageMemberSchema, SoilPageSchema, SoilRecordSchema, } from "./contracts.js";
+export function buildSnippet(text, query) {
+    const haystack = text.trim();
+    if (!haystack)
+        return "";
+    const tokens = query.toLowerCase().split(/\s+/).filter(Boolean);
+    const lower = haystack.toLowerCase();
+    for (const token of tokens) {
+        const index = lower.indexOf(token);
+        if (index >= 0) {
+            const start = Math.max(0, index - 50);
+            const end = Math.min(haystack.length, index + token.length + 100);
+            return haystack.slice(start, end);
+        }
+    }
+    return haystack.slice(0, 160);
+}
+export function serializeJson(value) {
+    return JSON.stringify(value ?? {});
+}
+export function parseJsonObject(input) {
+    try {
+        const parsed = JSON.parse(input);
+        return typeof parsed === "object" && parsed !== null && !Array.isArray(parsed)
+            ? parsed
+            : {};
+    }
+    catch {
+        return {};
+    }
+}
+export function parseJsonArray(input) {
+    try {
+        const parsed = JSON.parse(input);
+        return Array.isArray(parsed) ? parsed.filter((item) => typeof item === "string") : [];
+    }
+    catch {
+        return [];
+    }
+}
+export function parseReindexRecordIds(input) {
+    try {
+        const payload = JSON.parse(input);
+        if (typeof payload !== "object" || payload === null || Array.isArray(payload)) {
+            return [];
+        }
+        const value = payload.record_ids;
+        return Array.isArray(value)
+            ? value.filter((recordId) => typeof recordId === "string" && recordId.length > 0)
+            : [];
+    }
+    catch {
+        return [];
+    }
+}
+export function encodeEmbedding(entry) {
+    if (entry.encoding === "f32le") {
+        const floats = entry.embedding instanceof Uint8Array
+            ? new Float32Array(entry.embedding.buffer.slice(entry.embedding.byteOffset, entry.embedding.byteOffset + entry.embedding.byteLength))
+            : Float32Array.from(entry.embedding);
+        return Buffer.from(floats.buffer.slice(floats.byteOffset, floats.byteOffset + floats.byteLength));
+    }
+    const payload = entry.embedding instanceof Uint8Array
+        ? Array.from(entry.embedding.values())
+        : entry.embedding;
+    return Buffer.from(JSON.stringify(payload), "utf8");
+}
+export function decodeEmbedding(row) {
+    if (row.encoding === "f32le") {
+        const copy = row.embedding.buffer.slice(row.embedding.byteOffset, row.embedding.byteOffset + row.embedding.byteLength);
+        return Array.from(new Float32Array(copy));
+    }
+    return JSON.parse(row.embedding.toString("utf8"));
+}
+export function toRecord(row) {
+    return SoilRecordSchema.parse({
+        ...row,
+        is_active: Boolean(row.is_active),
+        metadata_json: parseJsonObject(row.metadata_json),
+    });
+}
+export function toPage(row) {
+    return SoilPageSchema.parse(row);
+}
+export function toPageMember(row) {
+    return SoilPageMemberSchema.parse(row);
+}
+export function unique(values) {
+    return [...new Set(values.filter((value) => value.length > 0))];
+}
+export function dedupeCandidates(candidates, limit) {
+    const byChunkId = new Map();
+    for (const candidate of candidates) {
+        const current = byChunkId.get(candidate.chunk_id);
+        if (!current ||
+            candidate.score > current.score ||
+            (candidate.score === current.score && current.page_id === null && candidate.page_id !== null)) {
+            byChunkId.set(candidate.chunk_id, candidate);
+        }
+    }
+    return [...byChunkId.values()]
+        .sort((left, right) => right.score - left.score || left.chunk_id.localeCompare(right.chunk_id))
+        .slice(0, limit)
+        .map((candidate, index) => ({ ...candidate, rank: index + 1 }));
+}
+export function fuseCandidates(lexical, dense, limit, rrfK = 60) {
+    const byChunkId = new Map();
+    for (const [lane, weight, candidates] of [
+        ["lexical", 1, lexical],
+        ["dense", 0.85, dense],
+    ]) {
+        for (const candidate of candidates) {
+            const prior = byChunkId.get(candidate.chunk_id);
+            const laneScore = weight / (rrfK + candidate.rank);
+            const metadata_json = {
+                ...(prior?.metadata_json ?? candidate.metadata_json),
+                [`${lane}_rank`]: candidate.rank,
+                [`${lane}_score`]: candidate.score,
+            };
+            if (!prior) {
+                byChunkId.set(candidate.chunk_id, {
+                    ...candidate,
+                    lane: "hybrid",
+                    score: laneScore,
+                    metadata_json,
+                });
+                continue;
+            }
+            byChunkId.set(candidate.chunk_id, {
+                ...prior,
+                page_id: prior.page_id ?? candidate.page_id,
+                snippet: prior.snippet ?? candidate.snippet,
+                score: prior.score + laneScore,
+                metadata_json,
+            });
+        }
+    }
+    return [...byChunkId.values()]
+        .sort((left, right) => right.score - left.score || left.chunk_id.localeCompare(right.chunk_id))
+        .slice(0, limit)
+        .map((candidate, index) => ({ ...candidate, rank: index + 1 }));
+}
+//# sourceMappingURL=sqlite-repository-helpers.js.map

package/dist/platform/soil/sqlite-repository-helpers.js.map

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package/dist/platform/soil/sqlite-repository-search.d.ts

@@ -0,0 +1,8 @@
+import { type SoilCandidate, type SoilSearchRequest, type SoilSearchRequestInput, type SoilSearchResult } from "./contracts.js";
+import { type SqliteDatabase } from "./sqlite-repository-helpers.js";
+export declare function buildRecordFilterSql(request: SoilSearchRequest, params: unknown[]): string[];
+export declare function lookupDirectCandidates(db: SqliteDatabase, input: SoilSearchRequestInput): SoilSearchResult;
+export declare function searchLexicalCandidates(db: SqliteDatabase, input: SoilSearchRequestInput): SoilCandidate[];
+export declare function searchDenseCandidates(db: SqliteDatabase, input: SoilSearchRequestInput, excludedRecordIds: string[]): SoilCandidate[];
+export declare function shouldRunDenseSearch(request: SoilSearchRequest, lexicalRecordIds: string[]): boolean;
+//# sourceMappingURL=sqlite-repository-search.d.ts.map

package/dist/platform/soil/sqlite-repository-search.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"sqlite-repository-search.d.ts","sourceRoot":"","sources":["../../../src/platform/soil/sqlite-repository-search.ts"],"names":[],"mappings":"AACA,OAAO,EAEL,KAAK,aAAa,EAClB,KAAK,iBAAiB,EACtB,KAAK,sBAAsB,EAC3B,KAAK,gBAAgB,EACtB,MAAM,gBAAgB,CAAC;AACxB,OAAO,EAQL,KAAK,cAAc,EAEpB,MAAM,gCAAgC,CAAC;AA0BxC,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,iBAAiB,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,EAAE,CAoD5F;AAmED,wBAAgB,sBAAsB,CAAC,EAAE,EAAE,cAAc,EAAE,KAAK,EAAE,sBAAsB,GAAG,gBAAgB,CAuH1G;AAED,wBAAgB,uBAAuB,CAAC,EAAE,EAAE,cAAc,EAAE,KAAK,EAAE,sBAAsB,GAAG,aAAa,EAAE,CAiD1G;AAED,wBAAgB,qBAAqB,CACnC,EAAE,EAAE,cAAc,EAClB,KAAK,EAAE,sBAAsB,EAC7B,iBAAiB,EAAE,MAAM,EAAE,GAC1B,aAAa,EAAE,CAuFjB;AAED,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,EAAE,GAAG,OAAO,CAEpG"}