psyclaw 0.29.11 → 0.29.13

package/dist/src/literature/knowledge-map.js

@@ -1,4 +1,8 @@
 import { createHash } from "node:crypto";
+/**
+ * Build a verified literature knowledge graph from ledger entries.
+ * Currently exported for contracts/tests; primary UI graph uses `src/knowledge-map/`.
+ */
 export function buildVerifiedKnowledgeMap(entries, now = new Date().toISOString()) {
     const nodes = new Map();
     const edges = [];

package/dist/src/literature/knowledge-map.js.map

@@ -1 +1 @@
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+{"version":3,"file":"knowledge-map.js","sourceRoot":"","sources":["../../../src/literature/knowledge-map.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAGzC;;;GAGG;AACH,MAAM,UAAU,yBAAyB,CAAC,OAAgC,EAAE,GAAG,GAAG,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;IACxG,MAAM,KAAK,GAAG,IAAI,GAAG,EAAyB,CAAC;IAC/C,MAAM,KAAK,GAAoB,EAAE,CAAC;IAClC,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;QAC5B,IAAI,KAAK,CAAC,YAAY,KAAK,UAAU;YAAE,SAAS;QAChD,MAAM,IAAI,GAAkB,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,IAAI,EAAE,EAAE,EAAE,KAAK,CAAC,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,MAAM,EAAE,QAAQ,EAAE,IAAI,EAAE,SAAS,EAAE,EAAE,EAAE,CAAC;QAC7J,IAAI,CAAC,SAAS,GAAG,CAAC,GAAG,IAAI,GAAG,CAAC,CAAC,GAAG,IAAI,CAAC,SAAS,EAAE,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;QAAC,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,IAAI,CAAC,CAAC;QACvF,KAAK,MAAM,MAAM,IAAI,KAAK,CAAC,OAAO,IAAI,EAAE,EAAE,CAAC;YACzC,MAAM,EAAE,GAAG,UAAU,MAAM,CAAC,WAAW,EAAE,EAAE,CAAC;YAC5C,KAAK,CAAC,GAAG,CAAC,EAAE,EAAE,KAAK,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,EAAE,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,IAAI,EAAE,SAAS,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;YAC7G,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,GAAG,KAAK,CAAC,MAAM,gBAAgB,EAAE,EAAE,EAAE,OAAO,EAAE,KAAK,CAAC,MAAM,EAAE,SAAS,EAAE,aAAa,EAAE,MAAM,EAAE,EAAE,EAAE,SAAS,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,EAAE,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC;QAC9J,CAAC;IACH,CAAC;IACD,MAAM,gBAAgB,GAAG,UAAU,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;IAC5F,OAAO,EAAE,aAAa,EAAE,0BAA0B,EAAE,KAAK,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,KAAK,EAAE,WAAW,EAAE,GAAG,EAAE,gBAAgB,EAAE,CAAC;AAC9H,CAAC"}

package/dist/src/panel/server.js

@@ -1,7 +1,7 @@
 import { createServer } from "node:http";
 import { randomUUID } from "node:crypto";
 import { spawn } from "node:child_process";
-import { lstat, mkdir, readFile, readdir, unlink, writeFile } from "node:fs/promises";
+import { lstat, mkdir, readFile, readdir, writeFile } from "node:fs/promises";
 import { dirname, join } from "node:path";
 import { fileURLToPath } from "node:url";
 import { getAgentDir } from "@earendil-works/pi-coding-agent";
@@ -28,15 +28,12 @@ import { listCitationUses, recordCitationUse } from "../core/citations.js";
 import { readPublishedVersions } from "../workflows/publish.js";
 // Backward-compatible re-export: existing tests import verifyDoi from the panel server.
 export { verifyDoi } from "../core/doi.js";
-import { resumePlanWithPi } from "../orchestration/pi-executor.js";
-import { RunEventLog } from "./events.js";
 import { PSYCLAW_IDENTITY_PROMPT } from "../branding.js";
 import { sessionHelpDocument } from "../session/help.js";
 import { recommendedSkillTarget } from "../skills/recommended.js";
 import { readUserSkillState, scanLocalSkills, setLocalSkillEnabled, userSkillId, } from "../skills/user-skills.js";
 import { loadVerifyChecklist, markVerifyItem, skipUnverifiedItems } from "../verify/checklist.js";
 import { readActiveAnalysisPlan } from "../analysis/plan.js";
-const activePanelRuns = new Set();
 async function readRecommendationState(root) {
     try {
         const value = JSON.parse(await readFile(join(root, ".psyclaw", "recommendations.json"), "utf8"));
@@ -797,9 +794,6 @@ export function createPanelServer(root, options = {}) {
             "/api/crosscheck",
             "/api/wake-options/respond",
         ];
-        // Kept false for source compatibility with the legacy handler below; the
-        // method gate above makes pause/resume unreachable from the panel API.
-        const runAction = false;
         if (request.method !== "GET" && request.method !== "HEAD" && !(request.method === "POST" && panelWriteRoutes.includes(url.pathname))) {
             response.writeHead(405, { "content-type": "application/json", allow: "GET, HEAD" });
             response.end(JSON.stringify({ error: "method not allowed" }));
@@ -1085,12 +1079,17 @@ export function createPanelServer(root, options = {}) {
                 const status = String(body.status ?? "verified");
                 if (!id)
                     throw new Error("id is required");
-                if (status !== "verified" && status !== "unverified" && status !== "flagged" && status !== "skipped") {
-                    throw new Error("status must be verified|unverified|flagged|skipped");
+                if (status !== "verified"
+                    && status !== "ai-checked"
+                    && status !== "unverified"
+                    && status !== "flagged"
+                    && status !== "skipped") {
+                    throw new Error("status must be verified|ai-checked|unverified|flagged|skipped");
                 }
                 const kind = typeof body.kind === "string" ? body.kind : undefined;
                 const notes = typeof body.notes === "string" ? body.notes : undefined;
-                const checklist = await markVerifyItem(root, id, status, notes, kind);
+                // Panel clicks are human approvals; AI marks go through /crosscheck in-session.
+                const checklist = await markVerifyItem(root, id, status, notes, kind, { source: "human" });
                 response.writeHead(200, { "content-type": "application/json" });
                 response.end(JSON.stringify({ schemaVersion: "psyclaw/crosscheck/v1", checklist }));
                 return;
@@ -1358,67 +1357,6 @@ export function createPanelServer(root, options = {}) {
                 }
                 return;
             }
-            if (runAction) {
-                const match = url.pathname.match(/^\/api\/runs\/([A-Za-z0-9][A-Za-z0-9._-]{0,127})\/(pause|resume)$/);
-                const runId = match?.[1] ?? "";
-                const action = match?.[2] ?? "";
-                const body = await readJsonBody(request);
-                const approved = body.approved === true;
-                const actor = String(body.actor ?? "").trim();
-                const reason = String(body.reason ?? "").trim();
-                if (!approved || !actor || reason.length < 3) {
-                    response.writeHead(400, { "content-type": "application/json" });
-                    response.end(JSON.stringify({ error: "approved=true, actor, and reason (3+ chars) are required" }));
-                    return;
-                }
-                const pausePath = await assertSafeProjectPath(root, `.psyclaw/runs/${runId}.pause`);
-                const planPath = await assertSafeProjectPath(root, `.psyclaw/plans/${runId}.json`);
-                if (action === "pause") {
-                    await atomicWriteFile(pausePath, `${JSON.stringify({ schemaVersion: "psyclaw/pause-request/v1", runId, actor, reason, requestedAt: new Date().toISOString() }, null, 2)}\n`);
-                    response.writeHead(200, { "content-type": "application/json" });
-                    response.end(JSON.stringify({ schemaVersion: "psyclaw/run-action-receipt/v1", action, runId, status: "pause-requested", actor }));
-                    return;
-                }
-                if (activePanelRuns.has(runId)) {
-                    response.writeHead(409, { "content-type": "application/json" });
-                    response.end(JSON.stringify({ error: "run is already being resumed" }));
-                    return;
-                }
-                let plan;
-                try {
-                    plan = JSON.parse(await readFile(planPath, "utf8"));
-                }
-                catch {
-                    response.writeHead(404, { "content-type": "application/json" });
-                    response.end(JSON.stringify({ error: "run plan not found" }));
-                    return;
-                }
-                await unlink(pausePath).catch(() => undefined);
-                activePanelRuns.add(runId);
-                try {
-                    const eventLog = new RunEventLog(root, runId);
-                    const result = await resumePlanWithPi(plan, {
-                        cwd: root,
-                        root,
-                        pauseRequested: async () => {
-                            try {
-                                await lstat(pausePath);
-                                return true;
-                            }
-                            catch {
-                                return false;
-                            }
-                        },
-                        onEvent: async (event) => { await eventLog.append(event); },
-                    });
-                    response.writeHead(200, { "content-type": "application/json" });
-                    response.end(JSON.stringify({ schemaVersion: "psyclaw/run-action-receipt/v1", action, runId, status: result.status, diagnostics: result.diagnostics, actor }));
-                }
-                finally {
-                    activePanelRuns.delete(runId);
-                }
-                return;
-            }
             if (url.pathname === "/api/artifacts") {
                 const indexPath = projectPaths(root).outputs + "/index.json";
                 let indexedArtifacts = [];
@@ -1479,44 +1417,6 @@ export function createPanelServer(root, options = {}) {
                 response.end(body);
                 return;
             }
-            if (url.pathname === "/api/artifact/save") {
-                if (request.method !== "POST") {
-                    response.writeHead(405, { "content-type": "application/json", allow: "POST" });
-                    response.end(JSON.stringify({ error: "method not allowed" }));
-                    return;
-                }
-                const body = await readJsonBody(request);
-                const relative = String(body.path ?? "").trim();
-                const content = typeof body.content === "string" ? body.content : "";
-                if (!relative || !/\.svg$/i.test(relative))
-                    throw new Error("only SVG artifacts can be edited");
-                const rel = relative.replaceAll("\\", "/");
-                if (rel.split("/").some((part) => part === ".." || part === ""))
-                    throw new Error("a relative artifact path is required");
-                if (!rel.startsWith("outputs/") && !rel.startsWith("analysis/outputs/"))
-                    throw new Error("artifact must be under outputs/ or analysis/outputs/");
-                const target = await assertSafeProjectPath(root, rel);
-                const stat = await lstat(target).catch(() => undefined);
-                if (stat !== undefined && (stat.isSymbolicLink() || !stat.isFile()))
-                    throw new Error("artifact must be a regular file");
-                await atomicWriteFile(target, content.endsWith("\n") ? content : `${content}\n`);
-                const receipt = {
-                    schemaVersion: "psyclaw/tool-receipt/v1",
-                    runId: `panel_${randomUUID().replaceAll("-", "")}`,
-                    taskId: "panel.artifact.save",
-                    tool: "panel.artifact.save",
-                    effect: "write",
-                    approval: "approved",
-                    idempotencyKey: `panel:artifact:${sha256Text(`${rel}\u0000${content}`).slice(0, 24)}`,
-                    ok: true,
-                    startedAt: new Date().toISOString(),
-                    finishedAt: new Date().toISOString(),
-                };
-                await atomicWriteFile(await assertSafeProjectPath(root, `.psyclaw/manifests/${receipt.runId}.receipt.json`), `${JSON.stringify(receipt, null, 2)}\n`);
-                response.writeHead(200, { "content-type": "application/json" });
-                response.end(JSON.stringify({ schemaVersion: "psyclaw/artifact-save-receipt/v1", ok: true, path: rel, bytes: Buffer.byteLength(content, "utf8") }));
-                return;
-            }
             if (url.pathname === "/api/ledger") {
                 const ledger = await loadLedger(root);
                 response.writeHead(200, { "content-type": "application/json" });