prolog-trace-viz 2.4.1 → 2.6.1

package/README.md

@@ -51,11 +51,21 @@ prolog-trace-viz <prolog-file> <query> [options]
 |--------|-------------|
 | `-o, --output <file>` | Write output to file (default: `<source>-output.md`) |
 | `--depth <number>` | Maximum trace depth to capture (default: 100) |
+| `--debug` | Enable all debug features |
+| `--debug:<flag>` | Enable specific debug flag (e.g., `--debug:internal-vars`) |
 | `--verbose` | Display detailed processing information |
 | `--quiet` | Suppress all non-error output except final result |
 | `-h, --help` | Show help message |
 | `-v, --version` | Show version number |
 
+### Debug Flags
+
+| Flag | Description |
+|------|-------------|
+| `internal-vars` | Show Prolog's internal variable names alongside clause variable names (e.g., `Z (_2008) = value`) |
+
+Debug flags can be combined: `--debug:internal-vars,other-flag` or use `--debug` to enable all.
+
 ### Examples
 
 Basic usage:
@@ -84,6 +94,8 @@ prolog-trace-viz program.pl "factorial(10, X)" --depth 20
 
 ## Example Output
 
+### Simple Example: Append
+
 Given a simple Prolog file `append.pl`:
 
 ```prolog
@@ -105,6 +117,75 @@ Produces a markdown document with:
 4. **Call tree diagram** - Mermaid visualisation showing execution structure
 5. **Final answer** - The result bindings with original query variables
 
+### Advanced Example: Recursive Arithmetic
+
+The tool excels at visualising complex recursive predicates. Consider this arithmetic transformation example:
+
+```prolog
+t(0+1, 1+0).
+t(X+0+1, X+1+0).
+t(X+1+1, Z) :- t(X+1, X1), t(X1+1, Z).
+```
+
+Running:
+
+```
+prolog-trace-viz operators.pl "t(1+0+1+1+1, B)"
+```
+
+Produces a beautifully nested timeline showing how the recursion unfolds:
+
+```
+┌─ Step 1: t(1+0+1+1+1,Z)
+│  Clause: t(X+1+1, Z) [line 28]
+│  Unifications:
+│    X = 1+0+1
+│  Subgoals:
+│    [1.1] t(X+1, X1) → t(1+0+1+1, X1)
+│    [1.2] t(X1+1, Z)
+│  
+│  ┌─ Step 2 [Goal 1.1]: t(1+0+1+1,Z)
+│  │  Clause: t(X+1+1, Z) [line 28]
+│  │  Unifications:
+│  │    X = 1+0
+│  │  Subgoals:
+│  │    [2.1] t(X+1, X1) → t(1+0+1, X1)
+│  │    [2.2] t(X1+1, Z)
+│  │  
+│  │  ┌─ Step 3 [Goal 2.1]: t(1+0+1,X+1+0)
+│  │  │  Fact: t(X+0+1, X+1+0) [line 27]
+│  │  │  Unifications:
+│  │  │    X = 1
+│  │  │  => X+1+0 = 1+1+0
+│  │  └─
+│  │  ┌─ Step 4 [Goal 2.2]: t(X1+1, Z) → t(1+1+0+1,X+1+0)
+│  │  │  where X1 = 1+1+0 (from Step 3)
+│  │  │  Fact: t(X+0+1, X+1+0) [line 27]
+│  │  │  Unifications:
+│  │  │    X = 1+1
+│  │  │  => X+1+0 = 1+1+1+0
+│  │  └─
+│  │  => Z = 1+1+1+0
+│  └─
+│  ┌─ Step 5 [Goal 1.2]: t(X1+1, Z) → t(1+1+1+0+1,X+1+0)
+│  │  where X1 = 1+1+1+0 (from Step 2)
+│  │  Fact: t(X+0+1, X+1+0) [line 27]
+│  │  Unifications:
+│  │    X = 1+1+1
+│  │  => X+1+0 = 1+1+1+1+0
+│  └─
+│  => Z = 1+1+1+1+0
+│  Query Variable: B = 1+1+1+1+0
+└─
+```
+
+Key features shown:
+- **Nested structure**: Child calls are visually nested inside their parents
+- **Subgoal tracking**: `[1.1]`, `[2.1]` etc. show which subgoal is being solved
+- **Binding context**: `where X1 = 1+1+0 (from Step 3)` shows how variables flow between sibling subgoals
+- **Clean variable names**: Uses clause variable names (X, Z, X1) instead of Prolog's internal names (_2008)
+- **Results after children**: The `=> Z = value` appears after all child steps complete
+
 ### Timeline Format
 
 The execution timeline shows each step with:

package/dist/build-info.d.ts

@@ -1,11 +1,11 @@
 export declare const BUILD_INFO: {
-    readonly version: "2.4.1";
+    readonly version: "2.6.1";
     readonly name: "prolog-trace-viz";
     readonly description: "Generate enhanced visual trace diagrams for Prolog query execution";
     readonly author: "Johnny Jarecsni <johnny.jarecsni@icloud.com>";
     readonly license: "MIT";
-    readonly buildTimestamp: "2026-01-11T13:55:39.032Z";
-    readonly gitCommit: "9a978a5";
+    readonly buildTimestamp: "2026-04-05T22:42:34.723Z";
+    readonly gitCommit: "dff7e85";
     readonly gitBranch: "main";
     readonly nodeVersion: "v22.17.0";
     readonly platform: "darwin";

package/dist/build-info.js

@@ -1,13 +1,13 @@
 // This file is auto-generated during build
 // Do not edit manually - regenerated on each build
 export const BUILD_INFO = {
-    "version": "2.4.1",
+    "version": "2.6.1",
     "name": "prolog-trace-viz",
     "description": "Generate enhanced visual trace diagrams for Prolog query execution",
     "author": "Johnny Jarecsni <johnny.jarecsni@icloud.com>",
     "license": "MIT",
-    "buildTimestamp": "2026-01-11T13:55:39.032Z",
-    "gitCommit": "9a978a5",
+    "buildTimestamp": "2026-04-05T22:42:34.723Z",
+    "gitCommit": "dff7e85",
     "gitBranch": "main",
     "nodeVersion": "v22.17.0",
     "platform": "darwin",

package/dist/cli.d.ts

@@ -1,4 +1,12 @@
 import { ToolError } from './errors.js';
+/**
+ * Available debug flags
+ */
+export type DebugFlag = 'internal-vars';
+/**
+ * All supported debug flags
+ */
+export declare const ALL_DEBUG_FLAGS: DebugFlag[];
 export interface CLIOptions {
     prologFile: string;
     query: string;
@@ -6,7 +14,8 @@ export interface CLIOptions {
     depth: number;
     verbose: boolean;
     quiet: boolean;
-    showInternalVars: boolean;
+    debugFlags: Set<DebugFlag>;
+    showCallTree: boolean;
 }
 export interface CLIResult {
     type: 'options' | 'help' | 'version' | 'copyright' | 'error';
@@ -18,13 +27,13 @@ export declare function getHelpText(): string;
 export declare function getVersion(): string;
 export declare function getCopyright(): string;
 export declare function getBuildInfo(): {
-    readonly version: "2.4.1";
+    readonly version: "2.6.1";
     readonly name: "prolog-trace-viz";
     readonly description: "Generate enhanced visual trace diagrams for Prolog query execution";
     readonly author: "Johnny Jarecsni <johnny.jarecsni@icloud.com>";
     readonly license: "MIT";
-    readonly buildTimestamp: "2026-01-11T13:55:39.032Z";
-    readonly gitCommit: "9a978a5";
+    readonly buildTimestamp: "2026-04-05T22:42:34.723Z";
+    readonly gitCommit: "dff7e85";
     readonly gitBranch: "main";
     readonly nodeVersion: "v22.17.0";
     readonly platform: "darwin";

package/dist/cli.d.ts.map

@@ -1 +1 @@
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package/dist/cli.js

@@ -1,5 +1,9 @@
 import { createError, ErrorCode } from './errors.js';
 import { BUILD_INFO, COPYRIGHT_NOTICE } from './build-info.js';
+/**
+ * All supported debug flags
+ */
+export const ALL_DEBUG_FLAGS = ['internal-vars'];
 const HELP_TEXT = `
 ${BUILD_INFO.name} v${BUILD_INFO.version} - ${BUILD_INFO.description}
 
@@ -13,18 +17,26 @@ ARGUMENTS:
 OPTIONS:
   -o, --output <file>     Write output to file instead of stdout
   --depth <n>             Maximum trace depth (default: 100)
-  --show-internal-vars    Show Prolog's internal variable names (e.g., _2008)
+  --tree                  Include call tree diagram (Mermaid) in output
+  --debug                 Enable all debug features
+  --debug:<flag>          Enable specific debug flag (e.g., --debug:internal-vars)
+  --debug:<f1>,<f2>       Enable multiple debug flags (comma-separated)
   --verbose               Display detailed processing information
   --quiet                 Suppress all non-error output except final result
   -h, --help              Show this help message
   -v, --version           Show version number
   --copyright             Show copyright and build information
 
+DEBUG FLAGS:
+  internal-vars           Show Prolog's internal variable names alongside
+                          clause variable names (e.g., "Z (_2008) = value")
+
 EXAMPLES:
   prolog-trace-viz program.pl "append([1,2], [3,4], X)"
   prolog-trace-viz program.pl "member(X, [a,b,c])" -o trace.md
   prolog-trace-viz program.pl "factorial(5, X)" --depth 10 --verbose
-  prolog-trace-viz program.pl "t(1+0+1, X)" --show-internal-vars
+  prolog-trace-viz program.pl "t(1+0+1, X)" --tree
+  prolog-trace-viz program.pl "t(1+0+1, X)" --debug:internal-vars
 `.trim();
 export function parseArgs(argv) {
     const args = argv.slice(2); // Skip node and script path
@@ -44,7 +56,8 @@ export function parseArgs(argv) {
         depth: 100,
         verbose: false,
         quiet: false,
-        showInternalVars: false,
+        debugFlags: new Set(),
+        showCallTree: false,
     };
     const positionalArgs = [];
     for (let i = 0; i < args.length; i++) {
@@ -76,8 +89,36 @@ export function parseArgs(argv) {
             }
             options.depth = depth;
         }
-        else if (arg === '--show-internal-vars') {
-            options.showInternalVars = true;
+        else if (arg === '--debug') {
+            // Enable all debug flags
+            for (const flag of ALL_DEBUG_FLAGS) {
+                options.debugFlags.add(flag);
+            }
+        }
+        else if (arg.startsWith('--debug:')) {
+            // Parse specific debug flags
+            const flagsPart = arg.slice('--debug:'.length);
+            const flagNames = flagsPart.split(',').map(f => f.trim());
+            for (const flagName of flagNames) {
+                if (flagName === '*' || flagName === 'all') {
+                    // --debug:* or --debug:all enables all flags
+                    for (const flag of ALL_DEBUG_FLAGS) {
+                        options.debugFlags.add(flag);
+                    }
+                }
+                else if (ALL_DEBUG_FLAGS.includes(flagName)) {
+                    options.debugFlags.add(flagName);
+                }
+                else {
+                    return {
+                        type: 'error',
+                        error: createError(ErrorCode.INVALID_ARGS, `Unknown debug flag: ${flagName}. Available flags: ${ALL_DEBUG_FLAGS.join(', ')}`),
+                    };
+                }
+            }
+        }
+        else if (arg === '--tree') {
+            options.showCallTree = true;
         }
         else if (arg === '--verbose') {
             options.verbose = true;
@@ -127,7 +168,8 @@ export function parseArgs(argv) {
             depth: options.depth,
             verbose: options.verbose,
             quiet: options.quiet,
-            showInternalVars: options.showInternalVars,
+            debugFlags: options.debugFlags,
+            showCallTree: options.showCallTree,
         },
     };
 }

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package/dist/index.js

@@ -165,7 +165,8 @@ async function run(options) {
             clauses: clauseDefinitions,
             finalAnswer,
             formatterOptions: {
-                showInternalVars: options.showInternalVars,
+                debugFlags: options.debugFlags,
+                showCallTree: options.showCallTree,
             },
         });
         // Write output - default to source file location if not specified

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";AAEA,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,UAAU,EAAE,YAAY,EAAc,MAAM,UAAU,CAAC;AACxF,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAC1C,OAAO,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AACjD,OAAO,EAAE,aAAa,EAAE,iBAAiB,EAAE,MAAM,eAAe,CAAC;AACjE,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAClC,OAAO,EAAE,WAAW,EAAE,UAAU,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,aAAa,CAAC;AACzE,OAAO,EAAE,eAAe,EAAE,oBAAoB,EAAE,MAAM,cAAc,CAAC;AACrE,OAAO,EAAE,eAAe,EAAc,eAAe,EAAE,MAAM,eAAe,CAAC;AAC7E,OAAO,EAAE,WAAW,EAAE,MAAM,WAAW,CAAC;AACxC,OAAO,EAAE,gBAAgB,EAAoB,MAAM,yBAAyB,CAAC;AAE7E;;;GAGG;AACH,SAAS,qBAAqB,CAAC,KAAa;IAC1C,MAAM,KAAK,GAAG,KAAK,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC;IACvC,IAAI,CAAC,KAAK;QAAE,OAAO,EAAE,CAAC;IAEtB,MAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;IACpD,OAAO,IAAI,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;AACjD,CAAC;AAED;;;GAGG;AACH,SAAS,yBAAyB,CAChC,OAAe,EACf,oBAA4B,EAC5B,aAAqB,EACrB,SAAmB;IAEnB,6CAA6C;IAC7C,MAAM,CAAC,WAAW,EAAE,KAAK,CAAC,GAAG,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;IAEnE,oDAAoD;IACpD,MAAM,SAAS,GAAG,oBAAoB,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC;IAC1D,MAAM,UAAU,GAAG,aAAa,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC;IAEpD,IAAI,CAAC,SAAS,IAAI,CAAC,UAAU;QAAE,OAAO,OAAO,CAAC;IAE9C,MAAM,QAAQ,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;IAC5D,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;IAE9D,gDAAgD;IAChD,MAAM,QAAQ,GAAG,QAAQ,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,WAAW,CAAC,CAAC;IAEhE,IAAI,QAAQ,IAAI,CAAC,IAAI,QAAQ,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC;QACjD,MAAM,WAAW,GAAG,SAAS,CAAC,QAAQ,CAAC,CAAC;QACxC,IAAI,SAAS,CAAC,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC;YAChC,OAAO,GAAG,WAAW,MAAM,KAAK,EAAE,CAAC;QACrC,CAAC;IACH,CAAC;IAED,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,KAAK,UAAU,IAAI;IACjB,MAAM,MAAM,GAAG,SAAS,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;IAEvC,IAAI,MAAM,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;QAC3B,OAAO,CAAC,GAAG,CAAC,WAAW,EAAE,CAAC,CAAC;QAC3B,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,IAAI,MAAM,CAAC,IAAI,KAAK,SAAS,EAAE,CAAC;QAC9B,OAAO,CAAC,GAAG,CAAC,UAAU,EAAE,CAAC,CAAC;QAC1B,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,IAAI,MAAM,CAAC,IAAI,KAAK,WAAW,EAAE,CAAC;QAChC,OAAO,CAAC,GAAG,CAAC,YAAY,EAAE,CAAC,CAAC;QAC5B,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,IAAI,MAAM,CAAC,IAAI,KAAK,OAAO,EAAE,CAAC;QAC5B,QAAQ,CAAC,WAAW,CAAC,MAAM,CAAC,KAAM,CAAC,CAAC,CAAC;QACrC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,OAAO,GAAG,MAAM,CAAC,OAAQ,CAAC;IAEhC,IAAI,CAAC;QACH,MAAM,GAAG,CAAC,OAAO,CAAC,CAAC;IACrB,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,QAAQ,CAAC,qBAAqB,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;QAClF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC;AAED,KAAK,UAAU,GAAG,CAAC,OAAmB;IACpC,UAAU,CAAC,cAAc,OAAO,CAAC,UAAU,gBAAgB,OAAO,CAAC,KAAK,EAAE,EAAE,OAAO,CAAC,CAAC;IAErF,qBAAqB;IACrB,UAAU,CAAC,0BAA0B,EAAE,OAAO,CAAC,CAAC;IAChD,MAAM,IAAI,GAAG,MAAM,iBAAiB,EAAE,CAAC;IACvC,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;QACf,QAAQ,CAAC,WAAW,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;QAClC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,mBAAmB;IACnB,UAAU,CAAC,WAAW,OAAO,CAAC,UAAU,KAAK,EAAE,OAAO,CAAC,CAAC;IACxD,IAAI,aAAqB,CAAC;IAC1B,IAAI,CAAC;QACH,aAAa,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,OAAO,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;IACjE,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,MAAM,EAAE,WAAW,EAAE,SAAS,EAAE,GAAG,MAAM,MAAM,CAAC,aAAa,CAAC,CAAC;QAC/D,QAAQ,CAAC,WAAW,CAAC,WAAW,CAAC,SAAS,CAAC,cAAc,EAAE,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC;QACjF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,8CAA8C;IAC9C,UAAU,CAAC,2BAA2B,EAAE,OAAO,CAAC,CAAC;IACjD,MAAM,OAAO,GAAG,eAAe,CAAC,aAAa,CAAC,CAAC;IAE/C,iEAAiE;IACjE,MAAM,eAAe,GAAG,oBAAoB,CAAC,aAAa,CAAC,CAAC;IAE5D,2DAA2D;IAC3D,MAAM,UAAU,GAAG,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,IAAI,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,EAAE,IAAI,EAAE,WAAW,CAAC,CAAC;IAEpG,6CAA6C;IAC7C,UAAU,CAAC,4BAA4B,EAAE,OAAO,CAAC,CAAC;IAClD,MAAM,QAAQ,GAAG,MAAM,iBAAiB,CAAC;QACvC,aAAa;QACb,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,KAAK,EAAE,OAAO,CAAC,KAAK;QACpB,UAAU;KACX,CAAC,CAAC;IAEH,IAAI,CAAC;QACH,wBAAwB;QACxB,UAAU,CAAC,4BAA4B,EAAE,OAAO,CAAC,CAAC;QAClD,MAAM,UAAU,GAAG,MAAM,aAAa,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC;QAEtD,UAAU,CAAC,qBAAqB,UAAU,CAAC,QAAQ,EAAE,EAAE,OAAO,CAAC,CAAC;QAChE,UAAU,CAAC,gBAAgB,UAAU,CAAC,IAAI,EAAE,MAAM,IAAI,CAAC,EAAE,EAAE,OAAO,CAAC,CAAC;QACpE,UAAU,CAAC,WAAW,UAAU,CAAC,MAAM,EAAE,EAAE,OAAO,CAAC,CAAC;QAEpD,IAAI,UAAU,CAAC,QAAQ,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC;YAClD,QAAQ,CAAC,gCAAgC,CAAC,CAAC;YAC3C,IAAI,UAAU,CAAC,MAAM,EAAE,CAAC;gBACtB,QAAQ,CAAC,UAAU,CAAC,MAAM,CAAC,CAAC;YAC9B,CAAC;YACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClB,CAAC;QAED,uDAAuD;QACvD,MAAM,SAAS,GAAG,OAAO,CAAC,UAAU,CAAC,QAAQ,CAAC,GAAG,CAAC;YAChD,CAAC,CAAC,OAAO,CAAC,UAAU,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package/dist/markdown-generator.d.ts

@@ -3,12 +3,14 @@
  */
 import { TimelineStep } from './timeline.js';
 import { TreeNode } from './tree.js';
+import { DebugFlag } from './cli.js';
 export interface ClauseDefinition {
     line: number;
     text: string;
 }
 export interface FormatterOptions {
-    showInternalVars?: boolean;
+    debugFlags?: Set<DebugFlag>;
+    showCallTree?: boolean;
 }
 export interface MarkdownContext {
     query: string;

package/dist/markdown-generator.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"markdown-generator.d.ts","sourceRoot":"","sources":["../src/markdown-generator.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAC7C,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AAIrC,MAAM,WAAW,gBAAgB;IAC/B,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,gBAAgB;IAC/B,gBAAgB,CAAC,EAAE,OAAO,CAAC;CAC5B;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,QAAQ,EAAE,YAAY,EAAE,CAAC;IACzB,IAAI,EAAE,QAAQ,GAAG,IAAI,CAAC;IACtB,OAAO,EAAE,gBAAgB,EAAE,CAAC;IAC5B,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,gBAAgB,CAAC,EAAE,gBAAgB,CAAC;CACrC;AAED;;GAEG;AACH,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,eAAe,GAAG,MAAM,CA2BjE"}
+{"version":3,"file":"markdown-generator.d.ts","sourceRoot":"","sources":["../src/markdown-generator.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAC7C,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AAIrC,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAErC,MAAM,WAAW,gBAAgB;IAC/B,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,gBAAgB;IAC/B,UAAU,CAAC,EAAE,GAAG,CAAC,SAAS,CAAC,CAAC;IAC5B,YAAY,CAAC,EAAE,OAAO,CAAC;CACxB;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,QAAQ,EAAE,YAAY,EAAE,CAAC;IACzB,IAAI,EAAE,QAAQ,GAAG,IAAI,CAAC;IACtB,OAAO,EAAE,gBAAgB,EAAE,CAAC;IAC5B,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,gBAAgB,CAAC,EAAE,gBAAgB,CAAC;CACrC;AAED;;GAEG;AACH,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,eAAe,GAAG,MAAM,CA6BjE"}

package/dist/markdown-generator.js

@@ -20,9 +20,11 @@ export function generateMarkdown(context) {
     // Timeline
     sections.push(generateTimelineSection(context));
     sections.push('');
-    // Tree
-    sections.push(generateTreeSection(context));
-    sections.push('');
+    // Tree (only if showCallTree is enabled)
+    if (context.formatterOptions?.showCallTree) {
+        sections.push(generateTreeSection(context));
+        sections.push('');
+    }
     // Final answer
     sections.push(generateFinalAnswerSection(context));
     return sections.join('\n');
@@ -79,7 +81,7 @@ function generateTimelineSection(context) {
         return lines.join('\n');
     }
     const formatterOptions = {
-        showInternalVars: context.formatterOptions?.showInternalVars ?? false,
+        debugFlags: context.formatterOptions?.debugFlags ?? new Set(),
     };
     lines.push(formatTimeline(context.timeline, formatterOptions));
     return lines.join('\n');
@@ -96,7 +98,7 @@ function generateTreeSection(context) {
         return lines.join('\n');
     }
     const formatterOptions = {
-        showInternalVars: context.formatterOptions?.showInternalVars ?? false,
+        debugFlags: context.formatterOptions?.debugFlags ?? new Set(),
     };
     lines.push('```mermaid');
     lines.push(formatTreeAsMermaid(context.tree, formatterOptions));

package/dist/markdown-generator.js.map

@@ -1 +1 @@
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+{"version":3,"file":"markdown-generator.js","sourceRoot":"","sources":["../src/markdown-generator.ts"],"names":[],"mappings":"AAAA;;GAEG;AAIH,OAAO,EAAE,cAAc,EAA4B,MAAM,yBAAyB,CAAC;AACnF,OAAO,EAAE,mBAAmB,EAAwB,MAAM,qBAAqB,CAAC;AA0BhF;;GAEG;AACH,MAAM,UAAU,gBAAgB,CAAC,OAAwB;IACvD,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,QAAQ;IACR,QAAQ,CAAC,IAAI,CAAC,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC;IACtC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAElB,iBAAiB;IACjB,QAAQ,CAAC,IAAI,CAAC,oBAAoB,CAAC,OAAO,CAAC,CAAC,CAAC;IAC7C,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAElB,qBAAqB;IACrB,QAAQ,CAAC,IAAI,CAAC,sBAAsB,CAAC,OAAO,CAAC,CAAC,CAAC;IAC/C,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAElB,WAAW;IACX,QAAQ,CAAC,IAAI,CAAC,uBAAuB,CAAC,OAAO,CAAC,CAAC,CAAC;IAChD,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAElB,yCAAyC;IACzC,IAAI,OAAO,CAAC,gBAAgB,EAAE,YAAY,EAAE,CAAC;QAC3C,QAAQ,CAAC,IAAI,CAAC,mBAAmB,CAAC,OAAO,CAAC,CAAC,CAAC;QAC5C,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACpB,CAAC;IAED,eAAe;IACf,QAAQ,CAAC,IAAI,CAAC,0BAA0B,CAAC,OAAO,CAAC,CAAC,CAAC;IAEnD,OAAO,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC7B,CAAC;AAED;;GAEG;AACH,SAAS,aAAa,CAAC,OAAwB;IAC7C,MAAM,KAAK,GAAG,OAAO,CAAC,aAAa,IAAI,OAAO,CAAC,KAAK,CAAC;IACrD,OAAO,6BAA6B,KAAK,EAAE,CAAC;AAC9C,CAAC;AAED;;GAEG;AACH,SAAS,oBAAoB,CAAC,OAAwB;IACpD,MAAM,KAAK,GAAG,OAAO,CAAC,aAAa,IAAI,OAAO,CAAC,KAAK,CAAC;IACrD,OAAO;QACL,UAAU;QACV,EAAE;QACF,KAAK;QACL,KAAK;QACL,KAAK;KACN,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACf,CAAC;AAED;;GAEG;AACH,SAAS,sBAAsB,CAAC,OAAwB;IACtD,MAAM,KAAK,GAAa,EAAE,CAAC;IAE3B,KAAK,CAAC,IAAI,CAAC,uBAAuB,CAAC,CAAC;IACpC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAEf,IAAI,OAAO,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACjC,KAAK,CAAC,IAAI,CAAC,qBAAqB,CAAC,CAAC;QAClC,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAC1B,CAAC;IAED,eAAe;IACf,KAAK,CAAC,IAAI,CAAC,qBAAqB,CAAC,CAAC;IAClC,KAAK,CAAC,IAAI,CAAC,qBAAqB,CAAC,CAAC;IAElC,aAAa;IACb,KAAK,MAAM,MAAM,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC;QACrC,KAAK,CAAC,IAAI,CAAC,KAAK,MAAM,CAAC,IAAI,QAAQ,MAAM,CAAC,IAAI,MAAM,CAAC,CAAC;IACxD,CAAC;IAED,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC;AAED;;GAEG;AACH,SAAS,uBAAuB,CAAC,OAAwB;IACvD,MAAM,KAAK,GAAa,EAAE,CAAC;IAE3B,KAAK,CAAC,IAAI,CAAC,uBAAuB,CAAC,CAAC;IACpC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAEf,IAAI,OAAO,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAClC,KAAK,CAAC,IAAI,CAAC,gCAAgC,CAAC,CAAC;QAC7C,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAC1B,CAAC;IAED,MAAM,gBAAgB,GAA6B;QACjD,UAAU,EAAE,OAAO,CAAC,gBAAgB,EAAE,UAAU,IAAI,IAAI,GAAG,EAAE;KAC9D,CAAC;IAEF,KAAK,CAAC,IAAI,CAAC,cAAc,CAAC,OAAO,CAAC,QAAQ,EAAE,gBAAgB,CAAC,CAAC,CAAC;IAE/D,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC;AAED;;GAEG;AACH,SAAS,mBAAmB,CAAC,OAAwB;IACnD,MAAM,KAAK,GAAa,EAAE,CAAC;IAE3B,KAAK,CAAC,IAAI,CAAC,cAAc,CAAC,CAAC;IAC3B,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAEf,IAAI,CAAC,OAAO,CAAC,IAAI,EAAE,CAAC;QAClB,KAAK,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;QACxC,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAC1B,CAAC;IAED,MAAM,gBAAgB,GAAyB;QAC7C,UAAU,EAAE,OAAO,CAAC,gBAAgB,EAAE,UAAU,IAAI,IAAI,GAAG,EAAE;KAC9D,CAAC;IAEF,KAAK,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACzB,KAAK,CAAC,IAAI,CAAC,mBAAmB,CAAC,OAAO,CAAC,IAAI,EAAE,gBAAgB,CAAC,CAAC,CAAC;IAChE,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAElB,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC;AAED;;GAEG;AACH,SAAS,0BAA0B,CAAC,OAAwB;IAC1D,MAAM,KAAK,GAAa,EAAE,CAAC;IAE3B,KAAK,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC9B,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAEf,IAAI,OAAO,CAAC,WAAW,EAAE,CAAC;QACxB,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QAClB,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,WAAW,CAAC,CAAC;QAChC,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACpB,CAAC;SAAM,CAAC;QACN,KAAK,CAAC,IAAI,CAAC,mCAAmC,CAAC,CAAC;IAClD,CAAC;IAED,+CAA+C;IAC/C,IAAI,OAAO,CAAC,SAAS,IAAI,OAAO,CAAC,QAAQ,EAAE,CAAC;QAC1C,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACf,KAAK,CAAC,IAAI,CAAC,mCAAmC,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;IACrE,CAAC;IAED,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACf,KAAK,CAAC,IAAI,CAAC,gCAAgC,CAAC,CAAC;IAE7C,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC"}

package/dist/timeline-formatter.d.ts

@@ -3,10 +3,12 @@
  *
  * Renders a hierarchical view where child calls are visually nested inside their parents.
  * By default, uses clause variable names (X, Z, X1) instead of internal Prolog names (_2008).
+ * With --debug:internal-vars, shows both: "Z (_2008) = value"
  */
 import { TimelineStep } from './timeline.js';
+import { DebugFlag } from './cli.js';
 export interface TimelineFormatterOptions {
-    showInternalVars?: boolean;
+    debugFlags?: Set<DebugFlag>;
 }
 /**
  * Format timeline steps into markdown with nested structure

package/dist/timeline-formatter.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"timeline-formatter.d.ts","sourceRoot":"","sources":["../src/timeline-formatter.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAE7C,MAAM,WAAW,wBAAwB;IACvC,gBAAgB,CAAC,EAAE,OAAO,CAAC;CAC5B;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,KAAK,EAAE,YAAY,EAAE,EAAE,OAAO,GAAE,wBAA6B,GAAG,MAAM,CASpG"}
+{"version":3,"file":"timeline-formatter.d.ts","sourceRoot":"","sources":["../src/timeline-formatter.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAC7C,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAErC,MAAM,WAAW,wBAAwB;IACvC,UAAU,CAAC,EAAE,GAAG,CAAC,SAAS,CAAC,CAAC;CAC7B;AASD;;GAEG;AACH,wBAAgB,cAAc,CAAC,KAAK,EAAE,YAAY,EAAE,EAAE,OAAO,GAAE,wBAA6B,GAAG,MAAM,CASpG"}

package/dist/timeline-formatter.js

@@ -3,7 +3,14 @@
  *
  * Renders a hierarchical view where child calls are visually nested inside their parents.
  * By default, uses clause variable names (X, Z, X1) instead of internal Prolog names (_2008).
+ * With --debug:internal-vars, shows both: "Z (_2008) = value"
  */
+/**
+ * Check if a debug flag is enabled
+ */
+function hasDebugFlag(options, flag) {
+    return options.debugFlags?.has(flag) ?? false;
+}
 /**
  * Format timeline steps into markdown with nested structure
  */
@@ -24,13 +31,13 @@ export function formatTimeline(steps, options = {}) {
 function formatStepNested(step, depth, options) {
     const lines = [];
     const indent = '│  '.repeat(depth);
-    const showInternal = options.showInternalVars ?? false;
+    const showInternalVars = hasDebugFlag(options, 'internal-vars');
     // Step header with box drawing
     const portLabel = step.port === 'merged' ? '' : step.port.toUpperCase() + ' ';
     // subgoalLabel is like "[1.1]", strip brackets for cleaner display
     const subgoalMarker = step.subgoalLabel ? ` [Goal ${step.subgoalLabel.slice(1, -1)}]` : '';
     // Format goal display - use clause variable name for output arg if available
-    const goalDisplay = formatGoalDisplay(step, showInternal);
+    const goalDisplay = formatGoalDisplay(step, showInternalVars);
     // Build goal display: show template → instantiated if we have binding context
     let fullGoalDisplay = `${portLabel}${goalDisplay}`;
     if (step.subgoalTemplate && step.subgoalBindings && step.subgoalBindings.length > 0) {
@@ -47,7 +54,7 @@ function formatStepNested(step, depth, options) {
     switch (step.port) {
         case 'call':
         case 'merged':
-            lines.push(...formatMergedContent(step, indent, showInternal));
+            lines.push(...formatMergedContent(step, indent, showInternalVars));
             break;
         case 'redo':
             lines.push(`${indent}│  Backtracking...`);
@@ -66,8 +73,8 @@ function formatStepNested(step, depth, options) {
     // Show result AFTER children (this is the key insight!)
     if (step.port === 'merged' && step.result) {
         // Get the output variable name from clause if available, otherwise extract from goal
-        const outputVar = getOutputVariableName(step, showInternal);
-        lines.push(`${indent}│  => ${outputVar} = ${step.result}`);
+        const resultDisplay = formatResultDisplay(step, showInternalVars);
+        lines.push(`${indent}│  => ${resultDisplay}`);
         // Show query variable state only on root-level steps (depth 0)
         // This prevents showing "A = ?" on intermediate steps
         if (depth === 0 && step.queryVarState) {
@@ -79,15 +86,20 @@ function formatStepNested(step, depth, options) {
 }
 /**
  * Format the goal display, replacing internal variable names with clause variable names
+ * When showInternalVars is true, shows both: "t(1+0+1, Z (_2008))"
+ *
+ * Priority for variable names:
+ * 1. subgoalTemplate (caller's variable name) - preferred for child steps
+ * 2. clause head (matched clause's variable name) - fallback
  */
-function formatGoalDisplay(step, showInternal) {
-    if (showInternal) {
-        return step.goal;
-    }
+function formatGoalDisplay(step, showInternalVars) {
     // If we have clause info, try to use clause variable name for the output argument
     if (step.clause) {
         const goalMatch = step.goal.match(/^([^(]+)\((.+)\)$/);
         const headMatch = step.clause.head.match(/^([^(]+)\((.+)\)$/);
+        // Also parse subgoalTemplate if available (caller's variable names)
+        const templateMatch = step.subgoalTemplate?.match(/^([^(]+)\((.+)\)$/);
+        const templateArgs = templateMatch ? splitArgs(templateMatch[2]) : null;
         if (goalMatch && headMatch) {
             const predicate = goalMatch[1];
             const goalArgs = splitArgs(goalMatch[2]);
@@ -96,8 +108,16 @@ function formatGoalDisplay(step, showInternal) {
             const displayArgs = goalArgs.map((arg, i) => {
                 // If this is an internal variable (starts with _) and we have a clause arg
                 if (isInternalVariable(arg) && i < headArgs.length) {
-                    // Use the full clause pattern (e.g., "Z" or "X+1+0")
-                    return headArgs[i];
+                    // Prefer subgoalTemplate variable (caller's name) over clause head variable
+                    const displayVar = (templateArgs && i < templateArgs.length)
+                        ? templateArgs[i]
+                        : headArgs[i];
+                    if (showInternalVars) {
+                        // Additive: show both display var and internal var
+                        return `${displayVar} (${arg})`;
+                    }
+                    // Clean: just show display var
+                    return displayVar;
                 }
                 return arg;
             });
@@ -107,30 +127,51 @@ function formatGoalDisplay(step, showInternal) {
     return step.goal;
 }
 /**
- * Get the output variable name for result display
+ * Format the result display line
+ * When showInternalVars is true, shows both: "Z (_2008) = value"
+ *
+ * Priority for variable names:
+ * 1. subgoalTemplate (caller's variable name) - preferred for child steps
+ * 2. clause head (matched clause's variable name) - fallback
  */
-function getOutputVariableName(step, showInternal) {
-    // Extract the last argument from the goal (typically the output)
-    const goalMatch = step.goal.match(/^[^(]+\((.+)\)$/);
-    if (!goalMatch)
+function formatResultDisplay(step, showInternalVars) {
+    if (!step.result)
         return '?';
-    const args = splitArgs(goalMatch[1]);
-    const lastArg = args[args.length - 1] || '?';
-    if (showInternal) {
-        return lastArg;
+    // Extract the last argument from the goal (typically the output - internal var)
+    const goalMatch = step.goal.match(/^[^(]+\((.+)\)$/);
+    const internalVar = goalMatch ? splitArgs(goalMatch[1]).pop() : null;
+    // Get the display variable name - prefer subgoalTemplate over clause head
+    let displayVar = null;
+    // First try subgoalTemplate (caller's variable name)
+    if (step.subgoalTemplate) {
+        const templateMatch = step.subgoalTemplate.match(/^[^(]+\((.+)\)$/);
+        if (templateMatch) {
+            const templateArgs = splitArgs(templateMatch[1]);
+            if (templateArgs.length > 0) {
+                displayVar = templateArgs[templateArgs.length - 1];
+            }
+        }
     }
-    // If we have clause info, use the clause pattern
-    if (step.clause) {
+    // Fallback to clause head variable name
+    if (!displayVar && step.clause) {
         const headMatch = step.clause.head.match(/^[^(]+\((.+)\)$/);
         if (headMatch) {
             const headArgs = splitArgs(headMatch[1]);
             if (headArgs.length > 0) {
-                // Use the full clause pattern (e.g., "Z" or "X+1+0")
-                return headArgs[headArgs.length - 1];
+                displayVar = headArgs[headArgs.length - 1];
             }
         }
     }
-    return lastArg;
+    if (displayVar) {
+        if (showInternalVars && internalVar && isInternalVariable(internalVar)) {
+            // Additive: show both
+            return `${displayVar} (${internalVar}) = ${step.result}`;
+        }
+        // Clean: just display var
+        return `${displayVar} = ${step.result}`;
+    }
+    // Fallback to internal var or ?
+    return `${internalVar || '?'} = ${step.result}`;
 }
 /**
  * Check if a term is an internal Prolog variable (starts with _)

package/dist/timeline-formatter.js.map

@@ -1 +1 @@
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package/dist/tree-formatter.d.ts

@@ -2,10 +2,12 @@
  * Tree Formatter - Generates Mermaid diagram from tree structure
  *
  * By default, uses clause variable names instead of internal Prolog names.
+ * With --debug:internal-vars, shows both: "Z (_2008) = value"
  */
 import { TreeNode } from './tree.js';
+import { DebugFlag } from './cli.js';
 export interface TreeFormatterOptions {
-    showInternalVars?: boolean;
+    debugFlags?: Set<DebugFlag>;
 }
 /**
  * Format tree as Mermaid diagram

package/dist/tree-formatter.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tree-formatter.d.ts","sourceRoot":"","sources":["../src/tree-formatter.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AAErC,MAAM,WAAW,oBAAoB;IACnC,gBAAgB,CAAC,EAAE,OAAO,CAAC;CAC5B;AAED;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,QAAQ,GAAG,IAAI,EAAE,OAAO,GAAE,oBAAyB,GAAG,MAAM,CA+BrG;AAoLD;;GAEG;AACH,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,QAAQ,GAAG,IAAI,CAe1D"}
+{"version":3,"file":"tree-formatter.d.ts","sourceRoot":"","sources":["../src/tree-formatter.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,QAAQ,EAAE,MAAM,WAAW,CAAC;AACrC,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAErC,MAAM,WAAW,oBAAoB;IACnC,UAAU,CAAC,EAAE,GAAG,CAAC,SAAS,CAAC,CAAC;CAC7B;AASD;;GAEG;AACH,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,QAAQ,GAAG,IAAI,EAAE,OAAO,GAAE,oBAAyB,GAAG,MAAM,CA+BrG;AAoLD;;GAEG;AACH,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,QAAQ,GAAG,IAAI,CAe1D"}

package/dist/tree-formatter.js

@@ -2,7 +2,14 @@
  * Tree Formatter - Generates Mermaid diagram from tree structure
  *
  * By default, uses clause variable names instead of internal Prolog names.
+ * With --debug:internal-vars, shows both: "Z (_2008) = value"
  */
+/**
+ * Check if a debug flag is enabled
+ */
+function hasDebugFlag(options, flag) {
+    return options.debugFlags?.has(flag) ?? false;
+}
 /**
  * Format tree as Mermaid diagram
  */
@@ -61,7 +68,7 @@ function collectNodesAndEdges(node, nodes, edges, styles, isRoot = true, options
  */
 function formatNodeLabel(node, options = {}) {
     const parts = [];
-    const showInternal = options.showInternalVars ?? false;
+    const showInternalVars = hasDebugFlag(options, 'internal-vars');
     // Use source clause head if available, otherwise use goal
     const displayGoal = node.clauseHead || node.goal;
     // Add call step with circled number
@@ -72,19 +79,18 @@ function formatNodeLabel(node, options = {}) {
     }
     // Add final binding if available
     if (node.finalBinding) {
-        // Format the binding - use clause variable name if not showing internal
-        const bindingDisplay = showInternal
-            ? node.finalBinding
-            : formatBindingWithClauseVar(node.finalBinding, node.clauseHead);
+        // Format the binding - use clause variable name, optionally with internal var
+        const bindingDisplay = formatBindingWithClauseVar(node.finalBinding, node.clauseHead, showInternalVars);
         parts.push(`Result: ${bindingDisplay}`);
     }
     return `"${parts.join('<br/>')}"`;
 }
 /**
  * Format a binding using clause variable name instead of internal name
- * e.g., "_2008=1+1+1+1+0" with clauseHead "t(X+1+1, Z)" -> "Z=1+1+1+1+0"
+ * When showInternalVars is true, shows both: "Z (_2008)=value"
+ * e.g., "_2008=1+1+1+1+0" with clauseHead "t(X+1+1, Z)" -> "Z=1+1+1+1+0" or "Z (_2008)=1+1+1+1+0"
  */
-function formatBindingWithClauseVar(binding, clauseHead) {
+function formatBindingWithClauseVar(binding, clauseHead, showInternalVars = false) {
     if (!clauseHead)
         return binding;
     // Parse binding: "_2008=1+1+1+1+0" -> ["_2008", "1+1+1+1+0"]
@@ -101,12 +107,13 @@ function formatBindingWithClauseVar(binding, clauseHead) {
             const args = splitArgsSimple(headMatch[1]);
             if (args.length > 0) {
                 const lastArg = args[args.length - 1].trim();
-                // Check if it's a simple variable
-                if (/^[A-Z][A-Za-z0-9_]*$/.test(lastArg)) {
-                    return `${lastArg}=${valuePart}`;
-                }
-                // For patterns like X+1+0, show the full pattern
-                if (lastArg.includes('+') || lastArg.includes('[')) {
+                // Check if it's a simple variable or pattern
+                if (/^[A-Z][A-Za-z0-9_]*$/.test(lastArg) || lastArg.includes('+') || lastArg.includes('[')) {
+                    if (showInternalVars) {
+                        // Additive: show both clause var and internal var
+                        return `${lastArg} (${varPart})=${valuePart}`;
+                    }
+                    // Clean: just clause var
                     return `${lastArg}=${valuePart}`;
                 }
             }

package/dist/tree-formatter.js.map

@@ -1 +1 @@
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package/dist/wrapper.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"wrapper.d.ts","sourceRoot":"","sources":["../src/wrapper.ts"],"names":[],"mappings":"AAIA,MAAM,WAAW,aAAa;IAC5B,aAAa,EAAE,MAAM,CAAC;IACtB,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,QAAQ;IACvB,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,OAAO,CAAC,IAAI,CAAC,CAAC;CAC9B;AAED;;;;;;;;GAQG;AACH,wBAAgB,eAAe,CAAC,MAAM,EAAE,aAAa,GAAG,MAAM,CAgC7D;AAED;;;;GAIG;AACH,wBAAgB,mBAAmB,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAcjE;AAED;;GAEG;AACH,wBAAgB,sBAAsB,CAAC,WAAW,EAAE,MAAM,EAAE,aAAa,EAAE,MAAM,GAAG,MAAM,CAMzF;AACD,wBAAsB,iBAAiB,CAAC,MAAM,EAAE,aAAa,GAAG,OAAO,CAAC,QAAQ,CAAC,CAiBhF;AAED;;;GAGG;AACH,wBAAgB,YAAY,CAAC,OAAO,EAAE,MAAM,GAAG,aAAa,GAAG,IAAI,CA2BlE"}

package/dist/wrapper.js

@@ -45,13 +45,17 @@ export function generateWrapper(config) {
  * but we need to map them back to the original source file line numbers.
  */
 export function calculateLineOffset(prologContent) {
-    // The wrapper structure is:
+    // The wrapper adds 4 lines before the user content:
     // Line 1: % Load custom tracer
     // Line 2: :- ['tracerPath'].
     // Line 3: (empty)
     // Line 4: % User's Prolog code (no instrumentation)
     // Line 5+: User content starts here
-    return 4; // User content starts at line 5 in wrapper, so offset is 4
+    // generateWrapper() calls prologContent.trim(), which strips leading blank lines.
+    // We must account for those stripped lines so wrapper line numbers map back correctly.
+    const leadingWhitespace = prologContent.slice(0, prologContent.length - prologContent.trimStart().length);
+    const strippedLeadingLines = (leadingWhitespace.match(/\n/g) || []).length;
+    return 4 - strippedLeadingLines;
 }
 /**
  * Maps a line number from the wrapper file back to the original source file.

package/dist/wrapper.js.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "prolog-trace-viz",
-  "version": "2.4.1",
+  "version": "2.6.1",
   "description": "Generate enhanced visual trace diagrams for Prolog query execution",
   "type": "module",
   "main": "dist/index.js",