project-graph-mcp 1.5.0 → 2.1.0

package/README.md

@@ -1,14 +1,19 @@
 [![npm version](https://img.shields.io/npm/v/project-graph-mcp)](https://www.npmjs.com/package/project-graph-mcp)
 [![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
 [![Node.js](https://img.shields.io/badge/Node.js-%3E%3D18-339933?logo=node.js&logoColor=white)](https://nodejs.org)
-[![Zero Dependencies](https://img.shields.io/badge/dependencies-0-brightgreen)](https://www.npmjs.com/package/project-graph-mcp)
 
 # project-graph-mcp
 
-An MCP server that parses your source code into a **10-50x compressed skeleton** — classes, functions, imports, and dependencies in a minified JSON. Agents navigate the graph using `expand`, `deps`, and `usages` without reading irrelevant files. The **AI Context Layer** compresses an entire codebase into ~1700 tokens (97% savings) with a single `get_ai_context` call. Supports **monorepo scanning** and **streaming analysis** for large codebases.
+**Maximize your AI agent's context window.** An MCP server that lets agents read and edit your codebase in **compact mode** — minified source with all variable names preserved. Code tokens drop **↓40%**, and `.ctx` documentation is injected only in the focus zone. Fewer tokens per file → more files fit in context → **deeper understanding of your codebase**.
+
+![Expanded view — formatted code with JSDoc, 28+ lines per function](docs/img/explorer-expanded.jpg)
+
+![Compact mode — same file, 14 lines total, ↓40% tokens. Agents read and edit this directly.](docs/img/explorer-compact.jpg)
+
+Includes a built-in [Web Dashboard](#web-dashboard) (`npx project-graph-mcp serve`) to visualize token metrics and compact ⇄ raw code in real-time.
 
 > [!TIP]
-> **132 kB, 47 files, zero external dependencies.** 49 MCP tools. Add one line to your MCP config and the server downloads itself on the next IDE restart.
+> **18 MCP tools, zero config.** Add one line to your MCP config and the server downloads itself on the next IDE restart.
 
 ### Project Skeleton (10-50x compression)
 
@@ -55,19 +60,25 @@ One call loads everything an agent needs to understand a project:
 
 ```javascript
 get_ai_context({ path: "src/" })
-// → { skeleton, docs, totalTokens: 1742, savings: "97%" }
+// → { skeleton, docs, totalTokens: 3150, savings: "93%" }
 ```
 
 - **Code compression** — Terser-minified source with export legend headers (20-55% per file)
 - **Compact Code Mode** — project-wide `compact`/`beautify` (preserves all names, strips comments/whitespace)
-- **Doc Dialect** — compact `.context/` documentation format, auto-generated from AST with `{DESCRIBE}` markers
+- **Doc Dialect** — compact `.context/` documentation format, auto-generated from AST with `{DESCRIBE}` markers. Descriptions use a **simplified English dialect** — max 80 characters, pipe-separated, with standard abbreviations (`fn/ret/cfg/init/auth/db/msg`):
+
+```
+generateJSDoc(t)→e.push,e.join|build /** */ JSDoc block from .ctx signature
+export expandFile(e,n)→beautify,inject|beautify compact JS + inject JSDoc from .ctx
+PATTERNS: Terser beautify|AST walk for injection points|reverse-order insertion
+```
 - **Two-tier `.ctx`** — `.ctx` (machine-generated, AST signatures) + `.ctx.md` (agent notes, TODO, decisions)
 - **Self-enriching** — `@enrich` instructions embedded in `.ctx` files guide any AI agent to fill descriptions
 - **Staleness detection** — `@sig` hashes track structural changes; `check_stale_docs` identifies outdated docs
 - **Merge strategy** — regenerating `.ctx` files preserves existing descriptions
 - **Boot aggregator** — `get_ai_context` combines skeleton + docs + compressed files in one response
 
-```
+```bash
 # Generate .context/ documentation templates
 npx project-graph-mcp generate-ctx src/
 
@@ -75,23 +86,72 @@ npx project-graph-mcp generate-ctx src/
 npx project-graph-mcp docs src/
 
 # Compress a single file for AI
-npx project-graph-mcp compress src/parser.js
+npx project-graph-mcp compress src/core/parser.js
 ```
 
+### Two-Tier Context: Overview → Focus
+
+Agents don't need full context for every file. The server provides a **progressive loading model**:
+
+| Mode | What agent reads | Token cost | Use case |
+|------|-----------------|------------|----------|
+| **Overview** | `get_skeleton()` + compact code | codeTok only | Understand project structure |
+| **Focus** | compact code + `.ctx` for specific files | codeTok + ctxTok (per file) | Deep work on area of interest |
+| **Traditional** | All raw source files | expanded | Reading source directly |
+
+```javascript
+// 1. Overview: read entire project structure (cheap, no .ctx)
+get_skeleton({ path: "src/" })
+// → Legend, stats, all classes/functions/exports — ~2-5K tokens
+
+// 2. Focus: get enriched context ONLY for area of interest
+get_focus_zone({ recentFiles: ["src/core/parser.js", "src/mcp/tools.js"] })
+// → Compact code + .ctx documentation for just those 2 files
+
+// 3. Or auto-detect from git diff
+get_focus_zone({ path: ".", useGitDiff: true })
+// → Context for recently changed files only
+```
+
+**Real-world token budget** (this project's own benchmark, 45 files):
+
+```
+Skeleton + docs only:          3.2K tok — 93% savings, full project overview
+Compact source (agent reads): 46.9K tok — 20-55% savings per file
+```
+
+**Per-file metrics breakdown:**
+
+| Layer | What | Tokens |
+|-------|------|--------|
+| Code (compact .js) | Minified source, all names preserved | codeTok |
+| Context (.ctx) | AST signatures, types, descriptions | ctxTok |
+| Total (focus mode) | What agent reads when focusing | codeTok + ctxTok |
+
 ### Compact Code Architecture
 
-Three modes for AI-native codebase editing — configure per project via `.context/config.json`:
+Two modes for AI-native codebase editing — configure per project via `.context/config.json`:
 
-| Mode | Storage | Agent reads | Agent edits |
-|------|---------|-------------|-------------|
-| **1 — Native Compact** | Minified JS | Files directly | Files directly |
-| **2 — Full Storage** (default) | Formatted JS | `get_compressed_file` | `edit_compressed` |
-| **3 — IDE Virtual** | Minified JS | IDE renders full view | IDE handles mapping |
+| Mode | Storage | Agent reads/writes | Human reviews |
+|------|---------|-------------------|---------------|
+| **1 — Compact** ⭐ | Minified JS | `src/` directly | `.expanded/` cache |
+| **2 — Full** | Formatted JS | compressed view | `src/` directly |
 
-**Mode 2 workflow** (recommended):
+**Mode 1 — Compact** (recommended for AI-first projects):
+
+Source of truth is compact code. Agents read and write it directly — saving tokens in **both directions** (input and output). Since output tokens cost 3-5x more than input, compact output is the biggest cost saving. Humans review via auto-generated `.expanded/` cache with restored names and injected JSDoc.
 
 ```javascript
-// 1. Read compressed view (saves 20-55% tokens)
+// Agent reads and edits compact source directly (20-55% fewer tokens both ways)
+// After edits, validate and generate human-readable cache:
+compact({ action: "validate_pipeline", path: ".", strict: true })
+compact({ action: "expand_project", path: "." })
+```
+
+**Mode 2 — Full** (for existing projects, no refactoring needed):
+
+```javascript
+// 1. Read compressed view (saves input tokens only)
 get_compressed_file({ path: "src/parser.js" })
 
 // 2. Edit by symbol name — server finds it via AST
@@ -105,6 +165,14 @@ edit_compressed({
 validate_ctx_contracts({ path: "." })
 ```
 
+**Migrating from Full to Compact:**
+
+```bash
+# Ensure git is clean, then run automated migration
+npx project-graph-mcp compact-migrate .
+# → compacts all JS, generates @names in .ctx, sets mode 1, validates
+```
+
 **`.ctx` typed signatures** — JSDoc types extracted into compact format:
 
 ```
@@ -112,13 +180,32 @@ parseFile(code:string,filename:string)→Promise<ParseResult>→parse,walk|parse
 ```
 
 ```bash
+# Check current mode
+npx project-graph-mcp mode .
+
 # Set project mode
-npx project-graph-mcp set-mode . 2
+npx project-graph-mcp set-mode . 1
 
 # Validate .ctx documentation matches source
 npx project-graph-mcp validate-ctx . --strict
 ```
 
+### Expand & Validate Pipeline
+
+The compact→expand pipeline is **fully reversible**. Verify round-trip integrity:
+
+```javascript
+// Expand a compact file back to full formatted + JSDoc
+compact({ action: "expand_file", path: "src/parser.js" })
+
+// Expand entire project
+compact({ action: "expand_project", path: ".", dryRun: true })
+
+// Validate compact ↔ expand round-trip
+compact({ action: "validate_pipeline", path: ".", strict: true })
+// → Reports any functions in source missing from .ctx
+```
+
 ### Test Checklists
 
 Test checklists live in `.ctx.md` files (alongside documentation), not in source code:
@@ -136,6 +223,49 @@ The agent calls `get_pending_tests`, runs the test, then `mark_test_passed` (whi
 
 `discover_sub_projects` scans standard monorepo directories (`packages/`, `apps/`, `services/`, `modules/`, `libs/`, `plugins/`) for sub-projects with `package.json`. Combined with `parseProject({ recursive: true })`, agents can analyze entire monorepos.
 
+### Database Analysis
+
+Scan SQL migrations and code for database schema insights:
+
+```javascript
+// Extract schema from SQL/migration files
+db({ action: "schema", path: "src/" })
+
+// Find where each table is referenced in code
+db({ action: "table_usage", path: "src/", table: "users" })
+
+// Detect tables defined but never queried
+db({ action: "dead_tables", path: "src/" })
+```
+
+### Web Dashboard
+
+Every project-graph-mcp instance includes a built-in web UI at `http://localhost:{port}/`:
+
+- **Multi-project dashboard** — overview of all registered projects with token metrics
+- **File tree** — navigate project structure
+- **Code viewer** — compact/raw toggle with syntax highlighting and per-file compression stats
+- **Dependency graph** — visual dependency exploration
+- **Health panel** — analysis results
+- **Live monitor** — real-time agent activity via WebSocket
+
+
+
+With the optional gateway, all projects are accessible under `http://project-graph.local/{project-name}/`.
+
+### Compression Metrics
+
+Token-level metrics are available project-wide and per-file:
+
+```javascript
+// Project-wide: how many tokens for the entire codebase
+// GET /api/compression-stats
+// → { files: 45, codeTok: 47000, ctxTok: 9500, totalTok: 56500 }
+
+// Per-file: shown in code viewer header
+// 2054 + 527 ctx = 2581 → 3340 tok (23% savings)
+```
+
 ### Performance
 
 - **Batch concurrency** — `generate_context_docs` processes 5 files in parallel
@@ -158,20 +288,26 @@ Every tool response includes contextual coaching — if the agent finds a massiv
 
 ## Quick Start
 
-Add to your IDE's MCP configuration:
+Generate the MCP config for your IDE (with correct paths):
 
-```json
-{
-  "mcpServers": {
-    "project-graph": {
-      "command": "npx",
-      "args": ["-y", "project-graph-mcp"]
-    }
-  }
-}
+```bash
+npx -y project-graph-mcp config
+```
+
+Copy the output JSON into your IDE's MCP config file, then restart.
+
+#### Grouped Tools (v2.0)
+
+v2.0 uses 18 domain-grouped tools instead of 49 individual endpoints. Grouped tools use an `action` parameter:
+
+```javascript
+navigate({ action: "expand", symbol: "MyClass" })
+analyze({ action: "complexity", path: "src/" })
+docs({ action: "generate", path: ".", scope: "focus" })
+compact({ action: "compact_file", path: "src/parser.js" })
 ```
 
-Restart your IDE — project-graph-mcp will be downloaded and started automatically.
+10 standalone tools (`get_skeleton`, `get_ai_context`, `invalidate_cache`, etc.) remain unchanged.
 
 <details>
 <summary>Where is my MCP config file?</summary>
@@ -195,7 +331,7 @@ See **[CONFIGURATION.md](CONFIGURATION.md)** for all supported IDEs (Antigravity
 git clone https://github.com/rnd-pro/project-graph-mcp
 cd project-graph-mcp
 # No npm install needed — zero dependencies
-# Use "node /path/to/project-graph-mcp/src/server.js" as the command in MCP config
+# Use "node /path/to/project-graph-mcp/src/network/server.js" as the command in MCP config
 ```
 
 </details>
@@ -215,7 +351,9 @@ npx project-graph-mcp docs src/           # Project docs (doc-dialect)
 npx project-graph-mcp generate-ctx src/   # Generate .context/ docs
 npx project-graph-mcp validate-ctx .      # Validate .ctx ↔ source
 npx project-graph-mcp mode .             # Show current editing mode
-npx project-graph-mcp set-mode . 2       # Set mode (1/2/3)
+npx project-graph-mcp compact-migrate .  # Migrate formatted -> compact (git must be clean)
+npx project-graph-mcp set-mode . 1       # Set mode (1=compact*, 2=full)
+npx project-graph-mcp serve .            # Start web dashboard
 npx project-graph-mcp help                # All commands
 ```
 
@@ -250,8 +388,10 @@ Best used together with [**agent-pool-mcp**](https://www.npmjs.com/package/agent
 
 - [CONFIGURATION.md](CONFIGURATION.md) — Setup for all supported IDEs
 - [ARCHITECTURE.md](ARCHITECTURE.md) — Source code structure
-- [AGENT_ROLE.md](AGENT_ROLE.md) — Full system prompt for agents
-- [AGENT_ROLE_MINIMAL.md](AGENT_ROLE_MINIMAL.md) — Minimal variant (agent self-discovers)
+- [AGENT_ROLE.md](docs/examples/AGENT_ROLE.md) — Full system prompt for agents
+- [AGENT_ROLE_MINIMAL.md](docs/examples/AGENT_ROLE_MINIMAL.md) — Minimal variant (agent self-discovers)
+- [GUIDE.md](GUIDE.md) — Comprehensive usage guide with all tools
+- [ROADMAP.md](docs/ROADMAP.md) — Feature roadmap and backlog
 
 ## Related Projects
 - [agent-pool-mcp](https://github.com/rnd-pro/agent-pool-mcp) — Multi-agent orchestration via Gemini CLI

package/package.json

@@ -1,25 +1,24 @@
 {
   "name": "project-graph-mcp",
-  "version": "1.5.0",
+  "version": "2.1.0",
   "type": "module",
-  "description": "MCP server for AI agents — multi-language project graph (JS, TS, Python, Go), code quality analysis, and framework-specific lint rules. Zero dependencies.",
-  "main": "src/server.js",
+  "description": "MCP server for AI agents — project graph, code quality analysis, visual web explorer. JS, TS, Python, Go.",
+  "main": "src/network/server.js",
   "bin": {
-    "project-graph-mcp": "src/server.js"
+    "project-graph-mcp": "src/network/server.js"
   },
   "files": [
     "src/",
+    "web/",
     "vendor/",
     "rules/",
-    "references/",
-    "AGENT_ROLE.md",
-    "AGENT_ROLE_MINIMAL.md",
+    "docs/",
     "CONFIGURATION.md",
     "README.md",
     "LICENSE"
   ],
   "scripts": {
-    "start": "node src/server.js",
+    "start": "node src/network/server.js",
     "test": "node --test tests/*.test.js"
   },
   "keywords": [
@@ -45,6 +44,11 @@
   "author": "RND-PRO",
   "homepage": "https://github.com/rnd-pro/project-graph-mcp",
   "license": "MIT",
+  "dependencies": {
+    "@symbiotejs/symbiote": "^3.2.1",
+    "symbiote-node": "^0.2.0",
+    "ws": "^8.20.0"
+  },
   "engines": {
     "node": ">=18.0.0"
   }

package/src/.project-graph-cache.json

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package/src/analysis/analysis-cache.js

@@ -0,0 +1,7 @@
+// @ctx .context/src/analysis/analysis-cache.ctx
+import{readFileSync as t,writeFileSync as e,mkdirSync as n,existsSync as r}from"fs";import{join as c,dirname as a}from"path";import{createHash as i}from"crypto";
+export function computeContentHash(t){return i("md5").update(t).digest("hex").slice(0,8)}
+export function getCachePath(t,e){const n=e.replace(/\.[^.]+$/,".json");return c(t,".cache",n)}
+export function readCache(e,n){const c=getCachePath(e,n);try{return r(c)?JSON.parse(t(c,"utf-8")):null}catch(t){return null}}
+export function writeCache(t,r,c){const i=getCachePath(t,r);try{n(a(i),{recursive:!0}),e(i,JSON.stringify({...c,cachedAt:(new Date).toISOString()},null,2))}catch(t){}}
+export function isCacheValid(t,e,n,r="content"){return!(!t||!t.sig||!t.contentHash||("sig"===r?t.sig!==e:t.sig!==e||t.contentHash!==n))}

package/src/analysis/complexity.js

@@ -0,0 +1,14 @@
+// @ctx .context/src/analysis/complexity.ctx
+import{readFileSync as t,readdirSync as e,statSync as i}from"fs";import{join as n,relative as o,resolve as r}from"path";import{parse as a}from"../../vendor/acorn.mjs";import*as l from"../../vendor/walk.mjs";import{shouldExcludeDir as s,shouldExcludeFile as c,parseGitignore as m}from"../core/filters.js";function findJSFiles(t,r=t){t===r&&m(r);
+const a=[];try{for(const l of e(t)){const e=n(t,l),m=o(r,e);i(e).isDirectory()?s(l,m)||a.push(...findJSFiles(e,r)):!l.endsWith(".js")||l.endsWith(".css.js")||l.endsWith(".tpl.js")||c(l,m)||a.push(e)}}catch(t){}return a}
+function calculateComplexity(t){let e=1;return l.simple(t,{IfStatement(){e++},ConditionalExpression(){e++},ForStatement(){e++},ForOfStatement(){e++},ForInStatement(){e++},WhileStatement(){e++},DoWhileStatement(){e++},SwitchCase(t){t.test&&e++},LogicalExpression(t){"&&"!==t.operator&&"||"!==t.operator||e++},BinaryExpression(t){"??"===t.operator&&e++},CatchClause(){e++}}),e}
+function getRating(t){return t<=5?"low":t<=10?"moderate":t<=20?"high":"critical"}
+export function analyzeComplexityFile(t,e){const i=[];
+let n;try{n=a(t,{ecmaVersion:"latest",sourceType:"module",locations:!0})}catch(t){return i}return l.simple(n,{FunctionDeclaration(t){if(!t.id)return;
+const n=calculateComplexity(t.body);i.push({name:t.id.name,type:"function",file:e,line:t.loc.start.line,complexity:n,rating:getRating(n)})},ArrowFunctionExpression(t){if("BlockStatement"!==t.body.type)return;
+const n=calculateComplexity(t.body);n>5&&i.push({name:"(arrow)",type:"function",file:e,line:t.loc.start.line,complexity:n,rating:getRating(n)})},MethodDefinition(t){if("method"!==t.kind)return;
+const n=t.key.name||t.key.value,o=calculateComplexity(t.value.body);i.push({name:n,type:"method",file:e,line:t.loc.start.line,complexity:o,rating:getRating(o)})}}),i}
+function analyzeFile(e,i){let n;try{n=t(e,"utf-8")}catch(t){return[]}return analyzeComplexityFile(n,o(i,e))}
+export async function getComplexity(t,e={}){const i=e.minComplexity||1,n=e.onlyProblematic||!1,o=r(t),a=findJSFiles(t);
+let l=[];for(const t of a)l.push(...analyzeFile(t,o));l=l.filter(t=>!(t.complexity<i||n&&("low"===t.rating||"moderate"===t.rating))),l.sort((t,e)=>e.complexity-t.complexity);
+const s={low:l.filter(t=>"low"===t.rating).length,moderate:l.filter(t=>"moderate"===t.rating).length,high:l.filter(t=>"high"===t.rating).length,critical:l.filter(t=>"critical"===t.rating).length,average:l.length>0?Math.round(l.reduce((t,e)=>t+e.complexity,0)/l.length*10)/10:0};return{total:l.length,stats:s,items:l.slice(0,30)}}