ppef 1.0.0 → 1.0.1

package/dist/robustness/analyzer.js

@@ -0,0 +1,191 @@
+/**
+ * Robustness Analyzer
+ *
+ * Analyzes algorithm robustness under perturbations.
+ * Computes variance, stability, and degradation metrics.
+ */
+import { computeSummaryStats } from "../aggregation/aggregators.js";
+/**
+ * Analyze robustness of a SUT under perturbation.
+ *
+ * @param baseResults - Results without perturbation
+ * @param perturbedResults - Results with perturbation, keyed by perturbation name
+ * @param metric - Metric to analyze
+ * @returns Robustness metrics
+ */
+export const analyzeRobustnessForMetric = (baseResults, perturbedResults, metric) => {
+    // Extract metric values
+    const baseValues = baseResults
+        .map((r) => r.metrics.numeric[metric])
+        .filter((v) => !Number.isNaN(v));
+    const perturbedValues = perturbedResults
+        .map((r) => r.metrics.numeric[metric])
+        .filter((v) => !Number.isNaN(v));
+    if (baseValues.length === 0 || perturbedValues.length === 0) {
+        return {
+            varianceUnderPerturbation: Number.NaN,
+            stdUnderPerturbation: Number.NaN,
+            coefficientOfVariation: Number.NaN,
+        };
+    }
+    // Compute statistics for perturbed results
+    // Note: baseStats could be used for relative comparison in future
+    const perturbedStats = computeSummaryStats(perturbedValues);
+    // Variance under perturbation
+    const varianceUnderPerturbation = perturbedStats.std === undefined ? Number.NaN : perturbedStats.std ** 2;
+    // Standard deviation
+    const stdUnderPerturbation = perturbedStats.std ?? Number.NaN;
+    // Coefficient of variation (relative variance)
+    const coefficientOfVariation = perturbedStats.mean !== 0 && perturbedStats.std !== undefined
+        ? perturbedStats.std / Math.abs(perturbedStats.mean)
+        : Number.NaN;
+    return {
+        varianceUnderPerturbation,
+        stdUnderPerturbation,
+        coefficientOfVariation,
+    };
+};
+/**
+ * Analyze robustness across multiple perturbation levels.
+ *
+ * @param results - All results including perturbed ones
+ * @param metric - Metric to analyze
+ * @param intensityLevels - Perturbation intensity levels
+ * @returns Robustness metrics with degradation curve
+ */
+export const analyzeRobustnessWithCurve = (results, metric, intensityLevels) => {
+    // Group results by perturbation intensity
+    const byIntensity = new Map();
+    // Base results (no perturbation)
+    const baseResults = results.filter((r) => r.run.config?.perturbationIntensity === undefined);
+    byIntensity.set(0, baseResults);
+    // Perturbed results
+    for (const level of intensityLevels) {
+        const levelResults = results.filter((r) => r.run.config?.perturbationIntensity === level);
+        if (levelResults.length > 0) {
+            byIntensity.set(level, levelResults);
+        }
+    }
+    // Build degradation curve
+    const degradationCurve = [];
+    for (const [level, levelResults] of byIntensity) {
+        const values = levelResults
+            .map((r) => r.metrics.numeric[metric])
+            .filter((v) => !Number.isNaN(v));
+        if (values.length > 0) {
+            const stats = computeSummaryStats(values);
+            degradationCurve.push({
+                perturbationLevel: level,
+                metricValue: stats.mean,
+                stdDev: stats.std,
+            });
+        }
+    }
+    // Sort by level
+    degradationCurve.sort((a, b) => a.perturbationLevel - b.perturbationLevel);
+    // Find breakpoint (significant degradation)
+    let breakpoint;
+    if (degradationCurve.length >= 2) {
+        const baseValue = degradationCurve[0].metricValue;
+        for (let index = 1; index < degradationCurve.length; index++) {
+            const relativeChange = Math.abs((degradationCurve[index].metricValue - baseValue) / baseValue);
+            if (relativeChange > 0.1) {
+                // 10% degradation threshold
+                breakpoint = degradationCurve[index].perturbationLevel;
+                break;
+            }
+        }
+    }
+    // Compute overall variance from all perturbed results
+    const allPerturbedValues = results
+        .filter((r) => r.run.config?.perturbationIntensity !== undefined)
+        .map((r) => r.metrics.numeric[metric])
+        .filter((v) => !Number.isNaN(v));
+    const overallStats = computeSummaryStats(allPerturbedValues);
+    return {
+        varianceUnderPerturbation: overallStats.std === undefined ? Number.NaN : overallStats.std ** 2,
+        stdUnderPerturbation: overallStats.std ?? Number.NaN,
+        coefficientOfVariation: overallStats.mean !== 0 && overallStats.std !== undefined
+            ? overallStats.std / Math.abs(overallStats.mean)
+            : Number.NaN,
+        degradationCurve,
+        breakpoint,
+    };
+};
+/**
+ * Compare robustness between two SUTs.
+ *
+ * @param sutAResults - Results for SUT A (including perturbed)
+ * @param sutBResults - Results for SUT B (including perturbed)
+ * @param metric - Metric to compare
+ * @returns Object with comparison metrics
+ */
+export const compareRobustness = (sutAResults, sutBResults, metric) => {
+    const sutAPerturbed = sutAResults.filter((r) => r.run.config?.perturbationIntensity !== undefined);
+    const sutBPerturbed = sutBResults.filter((r) => r.run.config?.perturbationIntensity !== undefined);
+    const sutABase = sutAResults.filter((r) => r.run.config?.perturbationIntensity === undefined);
+    const sutBBase = sutBResults.filter((r) => r.run.config?.perturbationIntensity === undefined);
+    const sutARobustness = analyzeRobustnessForMetric(sutABase, sutAPerturbed, metric);
+    const sutBRobustness = analyzeRobustnessForMetric(sutBBase, sutBPerturbed, metric);
+    const relativeRobustness = sutBRobustness.varianceUnderPerturbation === 0
+        ? Infinity
+        : sutARobustness.varianceUnderPerturbation / sutBRobustness.varianceUnderPerturbation;
+    return {
+        sutAVariance: sutARobustness.varianceUnderPerturbation,
+        sutBVariance: sutBRobustness.varianceUnderPerturbation,
+        relativeRobustness,
+    };
+};
+/**
+ * Create a full robustness analysis output.
+ *
+ * @param results - All evaluation results (base and perturbed)
+ * @param options - Analysis options
+ * @returns Complete robustness analysis output
+ */
+export const createRobustnessAnalysis = (results, options) => {
+    const analysisResults = [];
+    // Group results by SUT
+    const bySut = new Map();
+    for (const result of results) {
+        const existing = bySut.get(result.run.sut) ?? [];
+        existing.push(result);
+        bySut.set(result.run.sut, existing);
+    }
+    // Analyze each SUT for each metric and perturbation
+    for (const [sut, sutResults] of bySut) {
+        for (const metric of options.metrics) {
+            for (const perturbation of options.perturbations) {
+                // Filter to this perturbation
+                const baseResults = sutResults.filter((r) => !r.run.config?.perturbation);
+                const perturbedResults = sutResults.filter((r) => r.run.config?.perturbation === perturbation);
+                const robustness = analyzeRobustnessForMetric(baseResults, perturbedResults, metric);
+                // Get baseline value
+                const baseValues = baseResults.map((r) => r.metrics.numeric[metric]);
+                const baselineValue = baseValues.length > 0
+                    ? baseValues.reduce((a, b) => a + b, 0) / baseValues.length
+                    : Number.NaN;
+                analysisResults.push({
+                    sut,
+                    perturbation,
+                    metric,
+                    robustness,
+                    baselineValue,
+                    runCount: perturbedResults.length,
+                });
+            }
+        }
+    }
+    return {
+        version: "1.0.0",
+        timestamp: new Date().toISOString(),
+        results: analysisResults,
+        config: {
+            perturbations: options.perturbations,
+            metrics: options.metrics,
+            intensityLevels: options.intensityLevels,
+            runsPerLevel: options.runsPerLevel ?? 1,
+        },
+    };
+};
+//# sourceMappingURL=analyzer.js.map

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package/dist/robustness/index.d.ts

@@ -0,0 +1,8 @@
+/**
+ * Robustness Module
+ *
+ * Re-exports perturbations and robustness analysis.
+ */
+export { analyzeRobustnessForMetric, analyzeRobustnessWithCurve, compareRobustness, createRobustnessAnalysis, type RobustnessAnalysisOptions, } from "./analyzer.js";
+export { createPerturbation, edgeRemovalPerturbation, getPerturbation, nodeRemovalPerturbation, PERTURBATIONS, seedShiftPerturbation, weightNoisePerturbation, } from "./perturbations.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/robustness/index.d.ts.map

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package/dist/robustness/index.js

@@ -0,0 +1,8 @@
+/**
+ * Robustness Module
+ *
+ * Re-exports perturbations and robustness analysis.
+ */
+export { analyzeRobustnessForMetric, analyzeRobustnessWithCurve, compareRobustness, createRobustnessAnalysis, } from "./analyzer.js";
+export { createPerturbation, edgeRemovalPerturbation, getPerturbation, nodeRemovalPerturbation, PERTURBATIONS, seedShiftPerturbation, weightNoisePerturbation, } from "./perturbations.js";
+//# sourceMappingURL=index.js.map

package/dist/robustness/index.js.map

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package/dist/robustness/perturbations.d.ts

@@ -0,0 +1,46 @@
+/**
+ * Perturbation Implementations
+ *
+ * Concrete perturbations for robustness analysis.
+ * Each perturbation modifies evaluation cases in controlled ways.
+ */
+import type { Perturbation, PerturbationConfig } from "../types/perturbation.js";
+/**
+ * Edge removal perturbation.
+ * Randomly removes a fraction of edges from the graph.
+ */
+export declare const edgeRemovalPerturbation: Perturbation;
+/**
+ * Seed shift perturbation.
+ * Shifts seed nodes to their neighbors.
+ */
+export declare const seedShiftPerturbation: Perturbation;
+/**
+ * Node removal perturbation.
+ * Randomly removes non-seed nodes from the graph.
+ */
+export declare const nodeRemovalPerturbation: Perturbation;
+/**
+ * Weight noise perturbation.
+ * Adds Gaussian noise to edge weights.
+ */
+export declare const weightNoisePerturbation: Perturbation;
+/**
+ * All built-in perturbations.
+ */
+export declare const PERTURBATIONS: Perturbation[];
+/**
+ * Get a perturbation by ID.
+ *
+ * @param id - Perturbation identifier
+ * @returns Perturbation or undefined
+ */
+export declare const getPerturbation: (id: string) => Perturbation | undefined;
+/**
+ * Create a perturbation with custom intensity.
+ *
+ * @param config - Perturbation configuration
+ * @returns Perturbation with configured intensity
+ */
+export declare const createPerturbation: (config: PerturbationConfig) => Perturbation;
+//# sourceMappingURL=perturbations.d.ts.map

package/dist/robustness/perturbations.d.ts.map

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package/dist/robustness/perturbations.js

@@ -0,0 +1,184 @@
+/**
+ * Perturbation Implementations
+ *
+ * Concrete perturbations for robustness analysis.
+ * Each perturbation modifies evaluation cases in controlled ways.
+ */
+import { createHash } from "node:crypto";
+/**
+ * Edge removal perturbation.
+ * Randomly removes a fraction of edges from the graph.
+ */
+export const edgeRemovalPerturbation = {
+    id: "edge-removal",
+    name: "Edge Removal",
+    description: "Randomly remove a fraction of edges",
+    type: "structural",
+    intensity: 0.1, // Default: remove 10% of edges
+    apply(evaluationCase, seed = 42) {
+        const intensity = this.intensity ?? 0.1;
+        // Note: rng would be used when actually perturbing the graph at load time
+        // const rng = new SeededRandom(seed);
+        // Create perturbed case ID
+        const perturbedId = createHash("sha256")
+            .update(`${evaluationCase.caseId}-edge-removal-${intensity}-${seed}`)
+            .digest("hex")
+            .slice(0, 16);
+        // Mark artefacts as perturbed (actual perturbation happens at load time)
+        const perturbedArtefacts = (evaluationCase.inputs.artefacts ?? []).map((a) => ({
+            ...a,
+            metadata: {
+                ...a.metadata,
+                perturbation: "edge-removal",
+                perturbationIntensity: intensity,
+                perturbationSeed: seed,
+            },
+        }));
+        return {
+            ...evaluationCase,
+            caseId: perturbedId,
+            name: `${evaluationCase.name ?? "Case"} (${Math.round(intensity * 100)}% edges removed)`,
+            inputs: {
+                ...evaluationCase.inputs,
+                summary: {
+                    ...evaluationCase.inputs.summary,
+                    perturbation: "edge-removal",
+                    perturbationIntensity: intensity,
+                    perturbationSeed: seed,
+                },
+                artefacts: perturbedArtefacts,
+            },
+            tags: [...(evaluationCase.tags ?? []), "perturbed", "edge-removal"],
+        };
+    },
+};
+/**
+ * Seed shift perturbation.
+ * Shifts seed nodes to their neighbors.
+ */
+export const seedShiftPerturbation = {
+    id: "seed-shift",
+    name: "Seed Shift",
+    description: "Shift seed nodes to random neighbors",
+    type: "seed",
+    intensity: 1, // Default: shift all seeds
+    apply: (evaluationCase, seed = 42) => {
+        const perturbedId = createHash("sha256")
+            .update(`${evaluationCase.caseId}-seed-shift-${seed}`)
+            .digest("hex")
+            .slice(0, 16);
+        return {
+            ...evaluationCase,
+            caseId: perturbedId,
+            name: `${evaluationCase.name ?? "Case"} (seeds shifted)`,
+            inputs: {
+                ...evaluationCase.inputs,
+                summary: {
+                    ...evaluationCase.inputs.summary,
+                    perturbation: "seed-shift",
+                    perturbationSeed: seed,
+                },
+            },
+            tags: [...(evaluationCase.tags ?? []), "perturbed", "seed-shift"],
+        };
+    },
+};
+/**
+ * Node removal perturbation.
+ * Randomly removes non-seed nodes from the graph.
+ */
+export const nodeRemovalPerturbation = {
+    id: "node-removal",
+    name: "Node Removal",
+    description: "Randomly remove non-seed nodes",
+    type: "structural",
+    intensity: 0.05, // Default: remove 5% of nodes
+    apply(evaluationCase, seed = 42) {
+        const intensity = this.intensity ?? 0.05;
+        const perturbedId = createHash("sha256")
+            .update(`${evaluationCase.caseId}-node-removal-${intensity}-${seed}`)
+            .digest("hex")
+            .slice(0, 16);
+        return {
+            ...evaluationCase,
+            caseId: perturbedId,
+            name: `${evaluationCase.name ?? "Case"} (${Math.round(intensity * 100)}% nodes removed)`,
+            inputs: {
+                ...evaluationCase.inputs,
+                summary: {
+                    ...evaluationCase.inputs.summary,
+                    perturbation: "node-removal",
+                    perturbationIntensity: intensity,
+                    perturbationSeed: seed,
+                },
+            },
+            tags: [...(evaluationCase.tags ?? []), "perturbed", "node-removal"],
+        };
+    },
+};
+/**
+ * Weight noise perturbation.
+ * Adds Gaussian noise to edge weights.
+ */
+export const weightNoisePerturbation = {
+    id: "weight-noise",
+    name: "Weight Noise",
+    description: "Add Gaussian noise to edge weights",
+    type: "noise",
+    intensity: 0.1, // Default: 10% noise (std dev as fraction of weight)
+    apply(evaluationCase, seed = 42) {
+        const intensity = this.intensity ?? 0.1;
+        const perturbedId = createHash("sha256")
+            .update(`${evaluationCase.caseId}-weight-noise-${intensity}-${seed}`)
+            .digest("hex")
+            .slice(0, 16);
+        return {
+            ...evaluationCase,
+            caseId: perturbedId,
+            name: `${evaluationCase.name ?? "Case"} (${Math.round(intensity * 100)}% weight noise)`,
+            inputs: {
+                ...evaluationCase.inputs,
+                summary: {
+                    ...evaluationCase.inputs.summary,
+                    perturbation: "weight-noise",
+                    perturbationIntensity: intensity,
+                    perturbationSeed: seed,
+                },
+            },
+            tags: [...(evaluationCase.tags ?? []), "perturbed", "weight-noise"],
+        };
+    },
+};
+/**
+ * All built-in perturbations.
+ */
+export const PERTURBATIONS = [
+    edgeRemovalPerturbation,
+    seedShiftPerturbation,
+    nodeRemovalPerturbation,
+    weightNoisePerturbation,
+];
+/**
+ * Get a perturbation by ID.
+ *
+ * @param id - Perturbation identifier
+ * @returns Perturbation or undefined
+ */
+export const getPerturbation = (id) => PERTURBATIONS.find((p) => p.id === id);
+/**
+ * Create a perturbation with custom intensity.
+ *
+ * @param config - Perturbation configuration
+ * @returns Perturbation with configured intensity
+ */
+export const createPerturbation = (config) => {
+    const basePerturbation = getPerturbation(config.type);
+    if (!basePerturbation) {
+        throw new Error(`Unknown perturbation type: ${config.type}`);
+    }
+    return {
+        ...basePerturbation,
+        intensity: config.intensity,
+    };
+};
+//# sourceMappingURL=perturbations.js.map

package/dist/robustness/perturbations.js.map

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package/dist/statistical/index.d.ts

@@ -0,0 +1,8 @@
+/**
+ * Statistical Test Utilities
+ *
+ * Collection of statistical functions for hypothesis testing,
+ * effect size calculation, and confidence intervals.
+ */
+export { mannWhitneyUTest, normalCDF, cohensD, confidenceInterval } from "./mann-whitney-u.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/statistical/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/statistical/index.js

@@ -0,0 +1,8 @@
+/**
+ * Statistical Test Utilities
+ *
+ * Collection of statistical functions for hypothesis testing,
+ * effect size calculation, and confidence intervals.
+ */
+export { mannWhitneyUTest, normalCDF, cohensD, confidenceInterval } from "./mann-whitney-u.js";
+//# sourceMappingURL=index.js.map

package/dist/statistical/index.js.map

@@ -0,0 +1 @@
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package/dist/statistical/mann-whitney-u.d.ts

@@ -0,0 +1,62 @@
+/**
+ * Mann-Whitney U Test
+ *
+ * Statistical test for comparing two independent samples.
+ * Tests whether two populations have the same distribution.
+ *
+ * H0: Both populations have the same distribution
+ * H1: Populations have different distributions
+ *
+ * Returns p-value (smaller = more significant difference)
+ */
+/**
+ * Standard normal cumulative distribution function.
+ * Uses the Abramowitz and Stegun approximation.
+ *
+ * @param z - Z-score
+ * @returns Cumulative probability from -infinity to z
+ */
+export declare const normalCDF: (z: number) => number;
+/**
+ * Mann-Whitney U test for comparing two independent samples.
+ *
+ * Non-parametric test that does not assume normal distribution.
+ * Tests whether two populations have the same distribution.
+ *
+ * @param sampleA - First sample array
+ * @param sampleB - Second sample array
+ * @returns Object containing U statistic, p-value, and significance flag
+ */
+export declare const mannWhitneyUTest: (sampleA: number[], sampleB: number[]) => {
+    u: number;
+    pValue: number;
+    significant: boolean;
+};
+/**
+ * Calculate Cohen's d effect size.
+ *
+ * Measures the standardized difference between two means.
+ *
+ * Interpretation:
+ * - 0.2: Small effect
+ * - 0.5: Medium effect
+ * - 0.8: Large effect
+ *
+ * @param sampleA - First sample array
+ * @param sampleB - Second sample array
+ * @returns Cohen's d effect size
+ */
+export declare const cohensD: (sampleA: number[], sampleB: number[]) => number;
+/**
+ * Calculate confidence interval for a mean.
+ *
+ * Uses t-distribution approximation (1.96 for 95% CI with large samples).
+ *
+ * @param values - Sample values
+ * @returns Object with lower and upper bounds
+ */
+export declare const confidenceInterval: (values: number[]) => {
+    lower: number;
+    upper: number;
+};
+//# sourceMappingURL=mann-whitney-u.d.ts.map

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