popeye-cli 1.10.0 → 2.1.0

package/CHANGELOG.md

@@ -2,6 +2,120 @@
 
 All notable changes to Popeye CLI are documented in this file.
 
+## [2.1.0] - 2026-02-20
+
+### Added — AI Model Updates (Feb 2026)
+
+- **OpenAI models updated** — New default: `gpt-4.1` (was `gpt-4o`). Added: `gpt-4.1`, `gpt-4.1-mini`, `gpt-4.1-nano`, `o3`, `o3-mini`, `o4-mini`. Kept for backward compatibility: `gpt-4o`, `gpt-4o-mini`, `gpt-4-turbo`, `o1-preview`, `o1-mini`.
+- **Gemini models updated** — New default: `gemini-2.5-flash` (was `gemini-2.0-flash`). Added: `gemini-2.5-pro`, `gemini-2.5-flash`, `gemini-2.5-flash-lite`, `gemini-2.0-pro`. Kept: `gemini-2.0-flash`, `gemini-1.5-pro`, `gemini-1.5-flash`.
+- **Grok models updated** — Default unchanged: `grok-3`. Added: `grok-4-0709`, `grok-3-fast`, `grok-3-mini-fast`. Created proper `KNOWN_GROK_MODELS` constant (was hardcoded in interactive.ts). Kept: `grok-3`, `grok-3-mini`, `grok-2`.
+- **`KNOWN_GROK_MODELS`** constant in `src/types/consensus.ts` — matches `KNOWN_OPENAI_MODELS` and `KNOWN_GEMINI_MODELS` pattern.
+
+### Changed — Model Flexibility
+
+- `OpenAISettingsSchema` now uses `z.string().min(1)` instead of strict `z.enum()` — custom/new model names accepted everywhere.
+- `ProjectStateSchema.openaiModel` now uses flexible `z.string().min(1)` — was blocking unrecognized models in state persistence.
+- Removed strict `validModels` check in `create.ts` that rejected models not in the predefined list.
+- Files changed: `src/types/project.ts`, `src/types/consensus.ts`, `src/types/workflow.ts`, `src/types/index.ts`, `src/config/schema.ts`, `src/config/defaults.ts`, `src/adapters/openai.ts`, `src/adapters/gemini.ts`, `src/auth/gemini.ts`, `src/cli/interactive.ts`, `src/cli/commands/create.ts`, `src/upgrade/handlers.ts`, `src/workflow/website-strategy.ts`, `src/pipeline/consensus/consensus-runner.ts`.
+
+### Added — Review Bridge (/review -> Pipeline AUDIT Integration)
+
+- **Review Bridge** (`src/pipeline/bridges/review-bridge.ts`, ~370 lines) — Bridge module connecting `/review` to the pipeline artifact and Change Request system for pipeline-managed projects.
+  - `isPipelineManaged()` / `extractPipelineState()` — pipeline state detection helpers.
+  - `mapSeverity()` — severity mapping: critical to P0, major to P1, minor to P2, info to P3.
+  - `mapCategory()` — category mapping for workflow finding categories to pipeline categories.
+  - `categoryToChangeType()` — CR routing: integration/schema to architecture, security to requirement, tests/config/deployment to config.
+  - `convertFinding()` — converts workflow `AuditFinding` to pipeline `AuditFinding` with evidence refs.
+  - `runReviewBridge()` — full orchestrator: snapshot, scan, analyze, convert, create artifacts, create CRs, persist.
+- Modified `handleReviewSlashCommand` in `src/cli/interactive.ts` — detects pipeline-managed state and routes through the bridge (no milestone injection on pipeline projects).
+- Created `tests/pipeline/bridges/review-bridge.test.ts` — 29 tests covering severity/category/CR mapping, finding conversion, pipeline detection, and CR routing determinism.
+
+### Added — Pipeline Entry Point Integration v2.1
+
+- **Fix A (P0): Thread `additionalContext` through pipeline**
+  - Added `sessionGuidance` to `PipelineStateSchema` — persists user steering/upgrade context across phases.
+  - Added `'additional_context'` artifact type.
+  - Orchestrator accepts `additionalContext` option and stores in pipeline state.
+  - INTAKE phase prepends guidance to plan input and creates `additional_context` artifact.
+  - IMPLEMENTATION phase merges guidance with role prompt in system prompt.
+  - RECOVERY_LOOP phase includes guidance in RCA prompt.
+  - `resumeWorkflow()` passes `additionalContext` through to pipeline.
+- **Fix B (P0): New projects use pipeline from start**
+  - `runWorkflow()` bootstraps state via `createProject()` when `loadProject()` fails.
+  - Pipeline runs from INTAKE for fresh projects instead of skipping to legacy workflow.
+- **Fix C (P1): CLI commands load full consensus config**
+  - Created `src/config/popeye-md.ts` — shared `readPopeyeMdConfig()` reader with `PopeyeMdConfig` interface.
+  - CLI `create` and `resume` commands now load reviewer/arbitrator/model settings from `popeye.md`.
+
+### Added — Tests
+
+- 29 new tests in `tests/pipeline/bridges/review-bridge.test.ts`.
+- 16 tests in `tests/pipeline/session-guidance.test.ts` (sessionGuidance threading, artifact type, injection into intake/implementation/recovery).
+- 3 tests in `tests/workflow/pipeline-bootstrap.test.ts` (state bootstrap, existing state, legacy fallback).
+- 9 tests in `tests/config/popeye-md.test.ts` (parsing, model fields, arbitrator off, missing fields, notes).
+- Total: **1268 tests passing** across **76 test files**.
+
+---
+
+## [2.0.0] - 2026-02-20
+
+### Breaking Changes
+- **Full Autonomy Pipeline Engine** — Popeye now ships a complete 14-phase deterministic pipeline that replaces the ad-hoc plan-then-execute workflow with a gate-driven state machine. This is a fundamental architectural shift: every phase must produce typed artifacts, pass gate checks, and survive consensus review before the pipeline advances. The pipeline manages its own recovery, drift detection, and rewind logic without human intervention.
+- `PipelineState` is now the authoritative runtime state for autonomous execution (distinct from the existing `ProjectState` used by the interactive CLI).
+- New `src/pipeline/` module tree (33 source files) is a peer to the existing `src/workflow/` module.
+
+### Added — Pipeline Core (Autonomy Hardening v1.0)
+
+- **14-Phase State Machine** — `INTAKE` -> `CONSENSUS_MASTER_PLAN` -> `ARCHITECTURE` -> `CONSENSUS_ARCHITECTURE` -> `ROLE_PLANNING` -> `CONSENSUS_ROLE_PLANS` -> `IMPLEMENTATION` -> `QA_VALIDATION` -> `REVIEW` -> `AUDIT` -> `PRODUCTION_GATE` -> `DONE` (or `RECOVERY_LOOP` / `STUCK` on failure). Each phase has a dedicated handler in `src/pipeline/phases/`.
+- **Gate Engine** (`gate-engine.ts`) — Pure deterministic evaluator. Each phase has a `GateDefinition` specifying required artifacts, required checks, consensus thresholds, allowed transitions, and fail transition. No side effects; reads state only.
+- **Orchestrator** (`orchestrator.ts`) — Main loop that drives the pipeline from any phase to completion. Handles phase dispatch, gate evaluation, recovery routing, resume from saved state, and terminal state handling.
+- **Type-Safe Artifact System** (`artifact-manager.ts`, `type-defs/artifacts.ts`) — 18 artifact types (`master_plan`, `architecture`, `role_plan`, `consensus`, `repo_snapshot`, `rca_report`, `audit_report`, `qa_validation`, `review_decision`, `production_readiness`, `constitution`, `change_request`, `release_notes`, `journalist_update`, `dependency_graph`, `implementation_log`, `recovery_log`, `skill_definition`). Each artifact has id, type, phase, version, path, sha256, timestamp, immutability flag, content_type, and group_id.
+- **Consensus System** (`consensus/consensus-runner.ts`, `packets/consensus-packet-builder.ts`) — Multi-reviewer consensus with confidence-weighted scoring. `APPROVE` = 1.0, `CONDITIONAL` = 0.5, `REJECT` = 0.0, weighted by voter confidence. Any vote with `blocking_issues` forces `weighted_score` to 0. Three consensus phases (master plan, architecture, role plans) each produce `ConsensusPacket` artifacts.
+- **Skill Loader** (`skill-loader.ts`, `skills/defaults.ts`) — 16 pipeline roles (`DISPATCHER`, `FRONTEND_PROGRAMMER`, `BACKEND_PROGRAMMER`, `DATABASE_SPECIALIST`, `DEVOPS_ENGINEER`, `QA_ENGINEER`, `UX_DESIGNER`, `TECHNICAL_WRITER`, `REVIEWER`, `AUDITOR`, `JOURNALIST`, `SECURITY_ANALYST`, `PERFORMANCE_ENGINEER`, `INTEGRATION_SPECIALIST`, `ARCHITECT`, `PROJECT_MANAGER`). Each role has a system prompt, constraints, output contract, and required sections.
+- **Constitution System** (`constitution.ts`) — SHA-256 hash verification of `POPEYE_CONSTITUTION.md`. Created during INTAKE, verified before every gate evaluation. Hash mismatch blocks pipeline progression.
+- **Repo Snapshot & Drift Detection** (`repo-snapshot.ts`) — File/line counting, language detection, config file inventory, port scanning, test framework and build tool detection. Snapshot diffing for drift detection between approved plans and implementation.
+- **Check Runner** (`check-runner.ts`) — Deterministic command execution for `build`, `test`, `lint`, `typecheck`, `start`, and `env_check` gates. Captures exit code, stdout/stderr, duration.
+- **Command Resolver** (`command-resolver.ts`) — Auto-detects `build`, `test`, `lint`, `typecheck`, and `start` commands from `package.json` scripts, `Makefile`, and common patterns.
+- **Artifact Validators** (`artifact-validators.ts`) — Deterministic regex/structural checks before LLM review: `master_plan` (Goals, Milestones, Success Criteria sections, 200+ chars), `architecture` (Components, Data Flow, Tech Stack, file path references), `role_plan` (Tasks, Dependencies, Acceptance Criteria), `qa_validation` (Test Results, Coverage), `audit_report` (JSON with findings array, overall_status, system_risk_score).
+- **Change Request System** (`change-request.ts`) — Structured drift tracking: `scope` -> `CONSENSUS_MASTER_PLAN`, `architecture` -> `CONSENSUS_ARCHITECTURE`, `dependency` -> `CONSENSUS_ROLE_PLANS`, `config` -> `QA_VALIDATION`, `requirement` -> `CONSENSUS_MASTER_PLAN`. CRs include origin phase, requester, impact analysis (affected artifacts, phases, risk level).
+- **Role Execution Adapter** (`role-execution-adapter.ts`) — Bridges pipeline roles to execution. Builds role-specific system prompts from skill + role plan, defines allowed paths and forbidden patterns, injects context into `ClaudeExecuteOptions`.
+- **RCA & Recovery** (`packets/rca-packet-builder.ts`, `phases/recovery-loop.ts`) — Root Cause Analysis packets with `requires_phase_rewind_to` for targeted recovery. Recovery loop reads RCA artifacts from disk to determine rewind targets.
+- **Packet Builders** — `plan-packet-builder.ts` (PlanPacket with milestones, constraints, deliverables), `consensus-packet-builder.ts` (ConsensusPacket with votes, scores, conditions), `rca-packet-builder.ts` (RCAPacket with root cause, evidence, rewind target), `audit-report-builder.ts` (AuditReport with findings, risk score, status).
+- **Migration System** (`migration.ts`) — Version-aware pipeline state migration for forward compatibility.
+- **Pipeline Index** (`index.ts`) — Public API: `runPipeline()`, `resumePipeline()`, `createDefaultPipelineState()`, `createGateEngine()`, plus all type exports.
+
+### Added — Autonomy Hardening v1.1 (Gap Fixes)
+
+- **Deterministic CR Routing** — After REVIEW and AUDIT phases pass their gates, the orchestrator checks `pipeline.pendingChangeRequests` for proposed CRs. First proposed CR is marked `approved` and the pipeline transitions to its `target_phase` (a consensus phase). This is a real state machine transition, not advisory.
+- **Constitution Verification in Orchestrator** — `verifyConstitution(pipeline, projectDir)` is called before every `evaluateGate()`. Result is passed as `{ constitutionValid, constitutionReason }` options. Gate engine adds constitution failure as a blocker.
+- **Gate Result Merge** — `mergeGateResult()` preserves `score`/`consensusScore` stored by consensus phase handlers while updating `pass`/`blockers` from the gate engine. Prevents consensus scoring data loss on re-evaluation.
+- **RCA Rewind from Disk** — `getLatestRCA()` reads the latest `rca_report` JSON artifact from the filesystem and parses `requires_phase_rewind_to`. Recovery loop uses this to rewind to the correct phase instead of always returning to the failed phase.
+- `score?: number` on `GateResult` in `gate-engine.ts` (was present in type-defs but missing from the runtime interface).
+- `pendingChangeRequests` array on `PipelineState` for CR lifecycle tracking (`proposed` -> `approved` -> routing).
+
+### Added — Type System
+
+- **Split `types.ts` into `type-defs/` directory** (8 files) — `enums.ts` (PipelinePhase, PipelineRole), `artifacts.ts` (18 artifact types, ArtifactEntry, ArtifactRef, DependencyEdge), `packets.ts` (PlanPacket, ConsensusPacket, ReviewerVote, RCAPacket, ChangeRequest, Constraint), `audit.ts` (AuditFinding, AuditReport), `snapshot.ts` (RepoSnapshot, ConfigFileEntry, PortEntry, SnapshotDiff), `checks.ts` (GateCheckType, GateCheckResult, ResolvedCommands), `state.ts` (PipelineState, GateResult, GateDefinition, SkillDefinition, PhaseResult, PhaseContext), `index.ts` (barrel re-export). All existing `from '../pipeline/types.js'` imports work unchanged.
+
+### Added — Tests
+
+- **59 new test files** covering the entire pipeline module with **1210 total tests** (up from 828):
+  - `orchestrator.test.ts` (25 tests) — Happy path, recovery loop, resume, gate integration, v1.1 gap fixes (CR routing, constitution, merge, RCA rewind)
+  - `gate-engine.test.ts` — Gate definitions, evaluations, transitions, consensus thresholds
+  - `consensus-scoring.test.ts` — Weighted scoring, CONDITIONAL=0.5, blocking issues, confidence weights
+  - `constitution.test.ts` — Artifact creation, hash computation, tamper detection
+  - `artifact-validators.test.ts` — Each type: valid pass, missing sections, empty content, edge cases
+  - `change-request.test.ts` — CR building, routing per change type, impact analysis
+  - `role-execution-adapter.test.ts` — Role context, prompt injection, forbidden patterns
+  - `start-env-checks.test.ts` — Start check (alive/crash/timeout), env check (complete/missing/empty)
+  - `check-runner.test.ts`, `command-resolver.test.ts`, `consensus-runner.test.ts`, `repo-snapshot.test.ts`, `skill-loader.test.ts`, `artifact-manager.test.ts`, `migration.test.ts`, `types.test.ts`, `packets/builders.test.ts`
+
+### Changed
+- Orchestrator main loop now has 3 new behaviors between phase execution and transition: (1) constitution verification before gate eval, (2) gate result merging after gate eval, (3) CR routing check after REVIEW/AUDIT gate pass.
+- REVIEW phase creates CRs for config drift and scope drift, registers them in `pipeline.pendingChangeRequests`.
+- AUDIT phase creates CRs for blocking architectural and security findings, registers them in `pipeline.pendingChangeRequests`.
+- `src/workflow/index.ts` — Added pipeline exports for integration with existing workflow system.
+
 ## [1.6.0] - 2026-02-17
 
 ### Added

package/CONTRIBUTING.md

@@ -24,7 +24,7 @@ This project and everyone participating in it is governed by our commitment to p
 
 ## Getting Started
 
-Popeye CLI is built with TypeScript and uses several AI providers (Claude, OpenAI, Gemini) for its consensus-based code generation workflow.
+Popeye CLI is built with TypeScript and uses several AI providers (Claude, OpenAI, Gemini, Grok) for its consensus-based code generation workflow.
 
 ### Prerequisites
 
@@ -183,10 +183,17 @@ src/
 ├── adapters/      # AI provider integrations
 ├── auth/          # Authentication handling
 ├── cli/           # CLI commands and interface
-├── config/        # Configuration management
+├── config/        # Configuration management (includes popeye-md.ts shared reader)
 ├── generators/    # Project scaffolding
+├── pipeline/      # Full autonomy pipeline engine (14-phase state machine)
+│   ├── orchestrator.ts    # Main loop with CR routing, constitution check, gate merge
+│   ├── gate-engine.ts     # Deterministic gate evaluation
+│   ├── bridges/           # Integration bridges (review-bridge.ts for /review -> pipeline)
+│   ├── phases/            # Phase handler implementations
+│   └── type-defs/         # Pipeline-specific type definitions
 ├── state/         # State management
 ├── types/         # TypeScript type definitions
+├── upgrade/       # Project type upgrade system
 └── workflow/      # Core workflow logic
     ├── plan-storage.ts      # Consensus docs per-app storage
     └── workspace-manager.ts # Multi-app workspace management
@@ -257,6 +264,14 @@ Understanding the codebase:
                               │
                               ▼
 ┌─────────────────────────────────────────────────────────────┐
+│                    Pipeline Layer                             │
+│  (pipeline/*.ts - 14-phase autonomy engine, gate machine)   │
+│  Orchestrator -> Gate Engine -> Phase Handlers               │
+│  Constitution verification, CR routing, RCA rewind           │
+└─────────────────────────────────────────────────────────────┘
+                              │
+                              ▼
+┌─────────────────────────────────────────────────────────────┐
 │                     Workflow Layer                           │
 │  (workflow/*.ts - Plan mode, Execution mode, Consensus)     │
 └─────────────────────────────────────────────────────────────┘
@@ -264,7 +279,7 @@ Understanding the codebase:
                               ▼
 ┌─────────────────────────────────────────────────────────────┐
 │                     Adapter Layer                            │
-│  (adapters/*.ts - Claude, OpenAI, Gemini)                   │
+│  (adapters/*.ts - Claude, OpenAI, Gemini, Grok)             │
 └─────────────────────────────────────────────────────────────┘
                               │
                               ▼
@@ -274,6 +289,26 @@ Understanding the codebase:
 └─────────────────────────────────────────────────────────────┘
 ```
 
+### AI Model Conventions
+
+All three AI providers (OpenAI, Gemini, Grok) use **flexible string validation** (`z.string().min(1)`) for model names, not strict enums. This means:
+
+- Any valid model string is accepted, supporting newly released models immediately
+- Known model lists (`KNOWN_OPENAI_MODELS`, `KNOWN_GEMINI_MODELS`, `KNOWN_GROK_MODELS`) are used for display/suggestions only, not validation
+- Default models as of Feb 2026: OpenAI `gpt-4.1`, Gemini `gemini-2.5-flash`, Grok `grok-3`
+- When adding a new known model, update the `KNOWN_*_MODELS` constant in the relevant types file and update the corresponding `OPENAI_MODELS` record in `src/types/project.ts` if it is an OpenAI model
+
+### Bridge Pattern (Pipeline Integration)
+
+When existing CLI features need to work with the pipeline system, create a **bridge module** in `src/pipeline/bridges/`. Bridges:
+
+- Detect whether the project is pipeline-managed via state inspection
+- Convert between workflow types and pipeline types (e.g., severity mappings, category mappings)
+- Produce pipeline-native artifacts and Change Requests instead of modifying `state.json` directly
+- Keep the pipeline as the single source of truth for pipeline-managed projects
+
+See `review-bridge.ts` as the reference implementation.
+
 ## Questions?
 
 Feel free to:

package/README.md

@@ -109,7 +109,7 @@ The strategy document drives all downstream code generation, ensuring consistent
 Popeye uses multiple AI systems that must agree before implementation begins:
 
 - **Claude (via Claude Agent SDK)**: Primary code execution engine that generates plans, implements code, and runs tests
-- **OpenAI GPT-4** (default reviewer): Evaluates plans for completeness, feasibility, and quality
+- **OpenAI GPT-4.1** (default reviewer): Evaluates plans for completeness, feasibility, and quality
 - **Google Gemini** (optional): Can be configured as reviewer or arbitrator when consensus gets stuck
 - **xAI Grok** (optional): Can be configured as reviewer or arbitrator as an alternative to Gemini
 
@@ -838,7 +838,7 @@ popeye create "A CLI tool for converting markdown to PDF" \
 | `-n, --name <name>` | Project name | Derived from idea |
 | `-l, --language <lang>` | `python`, `typescript`, `fullstack`, `website`, or `all` | `python` |
 | `-d, --directory <dir>` | Output directory | Current directory |
-| `-m, --model <model>` | OpenAI model for consensus | `gpt-4o` |
+| `-m, --model <model>` | OpenAI model for consensus | `gpt-4.1` |
 
 ### `popeye resume`
 
@@ -931,6 +931,8 @@ The audit runs three stages:
 
 Reports are written to `.popeye/popeye.audit.md`, `.popeye/popeye.audit.json`, and optionally `.popeye/popeye.recovery.md`/`.json`. Recovery milestones are injected into the project state and can be executed with `popeye resume`.
 
+**Pipeline-Managed Projects**: When a project has pipeline state (created via the full autonomy pipeline), `/review` automatically routes through the Review Bridge. Instead of injecting recovery milestones into `state.json`, the bridge produces pipeline-native `audit_report` artifacts and Change Requests, keeping the pipeline as the single source of truth. Severity mapping: critical to P0, major to P1, minor to P2, info to P3. CRs are routed to the appropriate consensus phase based on finding category.
+
 ### Interactive Mode
 
 Launch an interactive REPL session:
@@ -987,8 +989,8 @@ The `/model` command supports multi-provider model switching across OpenAI, Gemi
 /model
 
 # Set model for a specific provider
-/model openai gpt-5
-/model gemini gemini-2.5-pro
+/model openai gpt-4.1
+/model gemini gemini-2.5-flash
 /model grok grok-3
 
 # List known models for a provider (suggestions only)
@@ -996,16 +998,16 @@ The `/model` command supports multi-provider model switching across OpenAI, Gemi
 /model gemini list
 
 # Backward compatible: set OpenAI model directly
-/model gpt-4o-mini
+/model gpt-4.1-mini
 ```
 
 **Known Models (for reference):**
 
-| Provider | Known Models |
-|----------|-------------|
-| OpenAI | `gpt-4o`, `gpt-4o-mini`, `gpt-4-turbo`, `o1-preview`, `o1-mini` |
-| Gemini | `gemini-2.0-flash`, `gemini-1.5-pro`, `gemini-1.5-flash` |
-| Grok | `grok-3` (flexible string, any model accepted) |
+| Provider | Known Models | Default |
+|----------|-------------|---------|
+| OpenAI | `gpt-4.1`, `gpt-4.1-mini`, `gpt-4.1-nano`, `o3`, `o3-mini`, `o4-mini`, `gpt-4o`, `gpt-4o-mini`, `gpt-4-turbo`, `o1-preview`, `o1-mini` | `gpt-4.1` |
+| Gemini | `gemini-2.5-pro`, `gemini-2.5-flash`, `gemini-2.5-flash-lite`, `gemini-2.0-flash`, `gemini-2.0-pro`, `gemini-1.5-pro`, `gemini-1.5-flash` | `gemini-2.5-flash` |
+| Grok | `grok-4-0709`, `grok-3`, `grok-3-mini`, `grok-3-fast`, `grok-3-mini-fast`, `grok-2` | `grok-3` |
 
 All three model values (openaiModel, geminiModel, grokModel) are:
 - Persisted to `popeye.md` and loaded automatically on resume
@@ -1064,8 +1066,8 @@ When you create a new project, Popeye automatically generates a `popeye.md` file
 language: fullstack
 reviewer: openai
 arbitrator: gemini
-openaiModel: gpt-4o
-geminiModel: gemini-2.0-flash
+openaiModel: gpt-4.1
+geminiModel: gemini-2.5-flash
 grokModel: grok-3
 created: 2024-01-15T10:30:00.000Z
 lastRun: 2024-01-15T14:45:00.000Z
@@ -1087,8 +1089,8 @@ Add any guidance or notes for Claude here...
 - **Language**: fullstack
 - **Reviewer**: openai
 - **Arbitrator**: gemini
-- **OpenAI Model**: gpt-4o
-- **Gemini Model**: gemini-2.0-flash
+- **OpenAI Model**: gpt-4.1
+- **Gemini Model**: gemini-2.5-flash
 - **Grok Model**: grok-3
 
 ## Session History
@@ -1118,11 +1120,11 @@ consensus:
 # API settings
 apis:
   openai:
-    model: gpt-4o             # Accepts any model name (e.g., gpt-5)
+    model: gpt-4.1            # Accepts any model name (e.g., gpt-5)
     temperature: 0.3
     max_tokens: 4096
   gemini:
-    model: gemini-2.0-flash   # Accepts any model name
+    model: gemini-2.5-flash   # Accepts any model name
     temperature: 0.3
     max_tokens: 4096
   grok:
@@ -1157,8 +1159,8 @@ POPEYE_OPENAI_KEY=sk-...           # OpenAI API key
 # Optional
 POPEYE_GEMINI_KEY=...              # Gemini API key (for arbitration)
 POPEYE_DEFAULT_LANGUAGE=python     # Default output language (python/typescript/fullstack/website/all)
-POPEYE_OPENAI_MODEL=gpt-4o         # OpenAI model
-POPEYE_GEMINI_MODEL=gemini-2.0-flash  # Gemini model
+POPEYE_OPENAI_MODEL=gpt-4.1        # OpenAI model
+POPEYE_GEMINI_MODEL=gemini-2.5-flash  # Gemini model
 POPEYE_CONSENSUS_THRESHOLD=95      # Consensus threshold (0-100)
 POPEYE_MAX_ITERATIONS=10           # Max iterations before escalation
 POPEYE_REVIEWER=openai             # Primary reviewer (openai, gemini, or grok)
@@ -1572,6 +1574,7 @@ src/
 ├── config/               # Configuration
 │   ├── schema.ts         # Zod schemas (uses OutputLanguageSchema for default_language)
 │   ├── defaults.ts       # Default values
+│   ├── popeye-md.ts      # Shared popeye.md config reader (used by CLI commands and interactive)
 │   └── index.ts          # Config loading
 ├── generators/           # Project generators
 │   ├── python.ts         # Python scaffolding
@@ -1606,6 +1609,20 @@ src/
 │   ├── handlers.ts       # Upgrade handlers (4 paths with file scaffolding)
 │   ├── index.ts          # Transactional orchestrator with backup/rollback
 │   └── context.ts        # Builds rich context for post-upgrade planning
+├── pipeline/             # Full autonomy pipeline engine (14 phases)
+│   ├── orchestrator.ts   # Top-level loop: phase dispatch, CR routing, constitution check
+│   ├── gate-engine.ts    # Deterministic state machine: gate definitions, evaluation
+│   ├── constitution.ts   # Constitution hashing and integrity verification (SHA-256)
+│   ├── change-request.ts # CR builder, routing (change_type -> consensus phase)
+│   ├── artifact-manager.ts # Artifact creation, storage, versioning
+│   ├── skill-loader.ts   # Role skill prompt loading from skills/ directory
+│   ├── repo-snapshot.ts  # Repo snapshot generation and diffing
+│   ├── bridges/          # Pipeline integration bridges
+│   │   └── review-bridge.ts  # /review -> pipeline AUDIT integration (severity/category/CR mapping)
+│   ├── consensus/        # Consensus runner for pipeline phases
+│   ├── phases/           # Phase handlers (intake, review, audit, recovery, etc.)
+│   ├── type-defs/        # Pipeline type definitions (state, enums, artifacts, packets)
+│   └── packets/          # Packet builders (audit report, consensus, RCA)
 ├── workflow/             # Workflow engine
 │   ├── consensus.ts      # Consensus loop (reviewerPersona threading)
 │   ├── plan-mode.ts      # Planning phase (strategy generation, monorepo-aware)
@@ -1645,6 +1662,75 @@ src/
     └── website-strategy.ts # WebsiteStrategyDocument, BrandAssetsContract, DesignTokens
 ```
 
+### Full Autonomy Pipeline Engine
+
+The `src/pipeline/` module implements the 14-phase deterministic pipeline defined in the `POPEYE_FULL_AUTONOMY_PIPELINE.md` spec. The pipeline drives a project from a single idea prompt through to production-ready status.
+
+#### Pipeline Phases
+
+```
+INTAKE -> CONSENSUS_MASTER_PLAN -> ARCHITECTURE -> CONSENSUS_ARCHITECTURE
+  -> ROLE_PLANNING -> CONSENSUS_ROLE_PLANS -> IMPLEMENTATION -> QA_VALIDATION
+  -> REVIEW -> AUDIT -> PRODUCTION_GATE -> DONE
+  (RECOVERY_LOOP on any gate failure, STUCK after max recovery iterations)
+```
+
+Each phase has:
+- **Required artifacts** that must exist before the gate passes
+- **Required checks** (build, test, lint, typecheck for PRODUCTION_GATE)
+- **Consensus threshold** (0.95 for plan phases)
+- **Allowed transitions** (strictly enforced, no phase skipping)
+
+#### Autonomy Hardening (v1.1)
+
+The orchestrator main loop includes three behaviors between phase execution and transition:
+
+1. **Constitution Verification**: Before every `evaluateGate()` call, the orchestrator verifies that `skills/POPEYE_CONSTITUTION.md` has not been modified since pipeline start (SHA-256 hash comparison). If the constitution is invalid, the gate is blocked with a specific reason.
+
+2. **Gate Result Merging**: After gate evaluation, `mergeGateResult()` preserves `score`/`consensusScore` values stored by consensus phase handlers while updating `pass`/`blockers` from the gate engine. This prevents consensus scores from being overwritten.
+
+3. **CR Routing**: After REVIEW and AUDIT phases pass their gates, the orchestrator checks `pipeline.pendingChangeRequests` for any `proposed` Change Requests. If found, the pipeline deterministically routes to the appropriate consensus phase rather than continuing normal progression.
+
+#### Change Request System
+
+| Change Type | Routes To |
+|-------------|-----------|
+| `scope` | `CONSENSUS_MASTER_PLAN` |
+| `architecture` | `CONSENSUS_ARCHITECTURE` |
+| `dependency` | `CONSENSUS_ROLE_PLANS` |
+| `config` | `QA_VALIDATION` |
+| `requirement` | `CONSENSUS_MASTER_PLAN` |
+
+CR Lifecycle: `proposed` (created by REVIEW/AUDIT) -> `approved` (routed by orchestrator) or `rejected`.
+
+#### Recovery and RCA Rewind
+
+When any gate fails, the pipeline enters RECOVERY_LOOP. After successful recovery, the orchestrator reads the latest RCA artifact from disk and checks for a `requires_phase_rewind_to` field. If present, the pipeline rewinds to that specific phase instead of retesting the originally failed phase. This allows root-cause-aware recovery (e.g., an implementation failure caused by an architecture gap can rewind to ARCHITECTURE).
+
+#### Session Guidance (additionalContext)
+
+The pipeline supports threading user-provided context through all phases via `sessionGuidance`. When `additionalContext` is passed to the orchestrator (e.g., from `/upgrade` context or user steering):
+
+- **INTAKE**: Guidance is prepended to the plan input and stored as an `additional_context` artifact
+- **IMPLEMENTATION**: Guidance is merged with the role prompt in the system prompt
+- **RECOVERY_LOOP**: Guidance is included in the RCA prompt to inform root cause analysis
+
+This ensures that user intent and upgrade context survive across all pipeline phases without manual re-injection.
+
+#### Pipeline Entry Point
+
+New projects can bootstrap directly into the pipeline from `runWorkflow()`. When `loadProject()` fails (no existing state), the workflow creates project state via `createProject()` and runs the pipeline from INTAKE. Existing projects with pipeline state resume from their last checkpoint. CLI commands (`create`, `resume`) load the full consensus configuration from `popeye.md` (reviewer, arbitrator, and all model selections) via the shared `readPopeyeMdConfig()` reader.
+
+#### Review Bridge
+
+The Review Bridge (`src/pipeline/bridges/review-bridge.ts`) connects the `/review` slash command to the pipeline's artifact and Change Request system. When a project is pipeline-managed:
+
+- The bridge detects pipeline state via `isPipelineManaged()` and `extractPipelineState()`
+- Audit findings are converted from workflow format to pipeline format with severity mapping (critical to P0, major to P1, minor to P2, info to P3)
+- Finding categories are mapped to pipeline categories and then to CR change types for routing
+- The bridge runs the full audit flow: snapshot, scan, analyze, convert findings, create artifacts, create CRs, and persist
+- No milestone injection occurs; instead, Change Requests route through the pipeline consensus system
+
 ## Development
 
 ```bash

package/dist/adapters/gemini.js

@@ -8,7 +8,7 @@ import { getGeminiToken } from '../auth/index.js';
  * Default Gemini configuration
  */
 export const DEFAULT_GEMINI_CONFIG = {
-    model: 'gemini-2.0-flash',
+    model: 'gemini-2.5-flash',
     temperature: 0.3,
     maxTokens: 4096,
 };
@@ -63,7 +63,7 @@ export async function requestConsensus(plan, context, config = {}) {
  */
 export async function requestArbitration(plan, reviewerFeedback, claudeFeedback, iterations, scores) {
     const client = await createClient();
-    const generativeModel = client.getGenerativeModel({ model: 'gemini-2.0-flash' });
+    const generativeModel = client.getGenerativeModel({ model: 'gemini-2.5-flash' });
     const prompt = buildArbitrationPrompt(plan, reviewerFeedback, claudeFeedback, iterations, scores);
     try {
         const result = await generativeModel.generateContent({
@@ -312,7 +312,7 @@ function parseList(text) {
 export async function validateApiKey() {
     try {
         const client = await createClient();
-        const model = client.getGenerativeModel({ model: 'gemini-2.0-flash' });
+        const model = client.getGenerativeModel({ model: 'gemini-2.5-flash' });
         await model.generateContent('Say "OK" if you can hear me.');
         return true;
     }

package/dist/adapters/openai.js

@@ -277,7 +277,7 @@ Be specific and actionable. The specification should be detailed enough that a d
         prompt += `\n\nThe user has provided the following project documentation that describes their product:\n\n${userDocs.slice(0, 4000)}\n\nUse this documentation to create an accurate, detailed specification that reflects the actual product described. Do not invent features or pricing not mentioned in the docs.`;
     }
     const completion = await client.chat.completions.create({
-        model: 'gpt-4o',
+        model: 'gpt-4.1',
         messages: [{ role: 'user', content: prompt }],
         temperature: 0.7,
         max_tokens: 4096,
@@ -311,7 +311,7 @@ Provide:
 
 Format your score as: CONSENSUS: [X]%`;
     const completion = await client.chat.completions.create({
-        model: 'gpt-4o',
+        model: 'gpt-4.1',
         messages: [{ role: 'user', content: prompt }],
         temperature: 0.3,
         max_tokens: 2048,

package/dist/adapters/openai.js.map

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package/dist/auth/gemini.js

@@ -14,7 +14,7 @@ import { getGeminiCredential, setGeminiCredential, deleteGeminiCredential, maskC
 export async function validateGeminiToken(apiKey) {
     try {
         const client = new GoogleGenerativeAI(apiKey);
-        const model = client.getGenerativeModel({ model: 'gemini-2.0-flash' });
+        const model = client.getGenerativeModel({ model: 'gemini-2.5-flash' });
         // Test the key by making a simple request
         await model.generateContent('Say "OK"');
         return true;

package/dist/cli/commands/create.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"create.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/create.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAuBpC;;GAEG;AACH,wBAAgB,mBAAmB,IAAI,OAAO,CAgO7C"}
+{"version":3,"file":"create.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/create.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAwBpC;;GAEG;AACH,wBAAgB,mBAAmB,IAAI,OAAO,CAqO7C"}

package/dist/cli/commands/create.js

@@ -9,6 +9,7 @@ import { ProjectSpecSchema } from '../../types/project.js';
 import { requireAuth } from '../../auth/index.js';
 import { runWorkflow } from '../../workflow/index.js';
 import { generateProject, projectDirExists, cleanupProject } from '../../generators/index.js';
+import { readPopeyeMdConfig } from '../../config/popeye-md.js';
 import { printHeader, printSection, printSuccess, printError, printWarning, printInfo, printKeyValue, printConsensusResult, startSpinner, updateSpinner, succeedSpinner, failSpinner, stopSpinner, } from '../output.js';
 /**
  * Create the create command
@@ -19,7 +20,7 @@ export function createCreateCommand() {
         .argument('<idea>', 'Project idea or description')
         .option('-n, --name <name>', 'Project name')
         .option('-l, --language <lang>', 'Output language (python/be, typescript/fe, fullstack/fs, website/web, all)', 'python')
-        .option('-m, --model <model>', 'OpenAI model for consensus (gpt-4o, gpt-4o-mini, o1-preview)', 'gpt-4o')
+        .option('-m, --model <model>', 'OpenAI model for consensus (gpt-4.1, gpt-4o, o3, o4-mini)', 'gpt-4.1')
         .option('-o, --output <dir>', 'Output directory', process.cwd())
         .option('--threshold <percent>', 'Consensus threshold percentage', '95')
         .option('--max-iterations <count>', 'Maximum consensus iterations', '5')
@@ -53,9 +54,8 @@ export function createCreateCommand() {
                 process.exit(1);
             }
             const model = options.model;
-            const validModels = ['gpt-4o', 'gpt-4o-mini', 'gpt-4-turbo', 'o1-preview', 'o1-mini'];
-            if (!validModels.includes(model)) {
-                printError(`Invalid model: ${model}. Use one of: ${validModels.join(', ')}`);
+            if (!model || model.trim().length === 0) {
+                printError('Model name must not be empty.');
                 process.exit(1);
             }
             // Generate project name from idea if not provided
@@ -119,14 +119,20 @@ export function createCreateCommand() {
                 }
                 succeedSpinner(`Created ${scaffoldResult.filesCreated.length} files`);
             }
-            // Run the workflow
+            // Run the workflow — merge CLI flags with popeye.md config
             printSection('Workflow Execution');
+            const popeyeConfig = await readPopeyeMdConfig(projectDir);
             const workflowResult = await runWorkflow(spec, {
                 projectDir,
                 consensusConfig: {
                     threshold,
                     maxIterations,
                     openaiModel: model,
+                    reviewer: popeyeConfig?.reviewer ?? 'openai',
+                    arbitrator: popeyeConfig?.arbitrator,
+                    enableArbitration: popeyeConfig?.enableArbitration ?? false,
+                    geminiModel: popeyeConfig?.geminiModel,
+                    grokModel: popeyeConfig?.grokModel,
                 },
                 onProgress: (phase, message) => {
                     handleProgressUpdate(phase, message);

package/dist/cli/commands/create.js.map

@@ -1 +1 @@
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package/dist/cli/commands/resume.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"resume.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/resume.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AA0BpC;;GAEG;AACH,wBAAgB,mBAAmB,IAAI,OAAO,CAuH7C;AAED;;GAEG;AACH,wBAAgB,kBAAkB,IAAI,OAAO,CA8C5C;AAED;;GAEG;AACH,wBAAgB,mBAAmB,IAAI,OAAO,CAyC7C"}