pindex 1.2.2 → 1.3.0

package/dist/db/queries.js

@@ -1,5 +1,9 @@
-import { sep } from 'node:path';
+/** Normalize any path to forward slashes (POSIX convention). */
+function toForwardSlash(p) {
+    return p.replace(/\\/g, '/');
+}
 export function upsertFile(db, input) {
+    input = { ...input, path: toForwardSlash(input.path) };
     db.prepare(`
     INSERT INTO files (path, language, hash, raw_token_estimate, summary, last_indexed)
     VALUES (@path, @language, @hash, @rawTokenEstimate, @summary, datetime('now'))
@@ -12,20 +16,18 @@ export function upsertFile(db, input) {
   `).run(input);
 }
 export function getFileByPath(db, path) {
-    // Normalise to the platform separator so forward-slash and backslash inputs
-    // both match the paths stored by the indexer on Windows (backslash) / Unix (slash).
-    const normalized = path.replace(/[\\/]/g, sep);
+    const normalized = toForwardSlash(path);
     return (db.prepare('SELECT * FROM files WHERE path = ?').get(normalized) ?? null);
 }
 export function getAllFiles(db) {
     return db.prepare('SELECT * FROM files ORDER BY path').all();
 }
 export function deleteFile(db, path) {
-    db.prepare('DELETE FROM files WHERE path = ?').run(path);
+    db.prepare('DELETE FROM files WHERE path = ?').run(toForwardSlash(path));
 }
 export function upsertSymbol(db, input) {
     const result = db.prepare(`
-    INSERT INTO symbols (file_id, name, kind, signature, summary, start_line, end_line, is_exported, is_async, has_try_catch)
+    INSERT OR REPLACE INTO symbols (file_id, name, kind, signature, summary, start_line, end_line, is_exported, is_async, has_try_catch)
     VALUES (@fileId, @name, @kind, @signature, @summary, @startLine, @endLine, @isExported, @isAsync, @hasTryCatch)
   `).run({
         ...input,
@@ -74,15 +76,15 @@ export function searchSymbolsFts(db, query, limit, filters) {
         params.push(limit);
         return db.prepare(sql).all(...params);
     }
-    catch {
-        // FTS query syntax errors – return empty rather than throw
+    catch (err) {
+        process.stderr.write(`[pindex] FTS symbol search error: ${err}\n`);
         return [];
     }
 }
 export function upsertDependency(db, input) {
     db.prepare(`
     INSERT OR IGNORE INTO dependencies (from_file, to_file, symbol_name)
-    VALUES (@fromFile, @toFile, @symbolName)
+    VALUES (@fromFile, @toFile, COALESCE(@symbolName, ''))
   `).run(input);
 }
 export function getDependenciesByFile(db, fileId) {
@@ -106,13 +108,14 @@ export function upsertUsage(db, input) {
     VALUES (@symbolId, @usedInFile, @usedAtLine)
   `).run(input);
 }
-export function getUsagesBySymbol(db, symbolId) {
+export function getUsagesBySymbol(db, symbolId, limit = 200) {
     return db
         .prepare(`SELECT u.*, f.path AS file_path
        FROM usages u JOIN files f ON u.used_in_file = f.id
        WHERE u.symbol_id = ?
-       ORDER BY f.path, u.used_at_line`)
-        .all(symbolId);
+       ORDER BY f.path, u.used_at_line
+       LIMIT ?`)
+        .all(symbolId, limit);
 }
 export function deleteUsagesByFile(db, fileId) {
     db.prepare('DELETE FROM usages WHERE used_in_file = ?').run(fileId);
@@ -206,7 +209,8 @@ export function searchDocumentsFts(db, query, limit) {
          LIMIT ?`)
             .all(query, limit);
     }
-    catch {
+    catch (err) {
+        process.stderr.write(`[pindex] FTS document search error: ${err}\n`);
         return [];
     }
 }
@@ -228,7 +232,8 @@ export function searchContextEntriesFts(db, query, limit) {
          LIMIT ?`)
             .all(query, limit);
     }
-    catch {
+    catch (err) {
+        process.stderr.write(`[pindex] FTS context search error: ${err}\n`);
         return [];
     }
 }
@@ -246,10 +251,10 @@ export function upsertAstSnapshot(db, input) {
 export function getSnapshotsByFile(db, filePath) {
     return db
         .prepare('SELECT * FROM ast_snapshots WHERE file_path = ?')
-        .all(filePath);
+        .all(toForwardSlash(filePath));
 }
 export function deleteSnapshotsByFile(db, filePath) {
-    db.prepare('DELETE FROM ast_snapshots WHERE file_path = ?').run(filePath);
+    db.prepare('DELETE FROM ast_snapshots WHERE file_path = ?').run(toForwardSlash(filePath));
 }
 export function insertObservation(db, input) {
     const result = db.prepare(`
@@ -264,29 +269,30 @@ export function insertObservation(db, input) {
     });
     return result.lastInsertRowid;
 }
-export function getObservationsBySession(db, sessionId) {
+export function getObservationsBySession(db, sessionId, includeStale = true, limit = 500) {
+    const staleClause = includeStale ? '' : ' AND stale = 0';
     return db
-        .prepare('SELECT * FROM session_observations WHERE session_id = ? ORDER BY created_at')
-        .all(sessionId);
+        .prepare(`SELECT * FROM session_observations WHERE session_id = ?${staleClause} ORDER BY created_at LIMIT ?`)
+        .all(sessionId, limit);
 }
 export function getObservationsByFile(db, filePath, limit = 5) {
     return db
         .prepare('SELECT * FROM session_observations WHERE file_path = ? ORDER BY created_at DESC LIMIT ?')
-        .all(filePath, limit);
+        .all(toForwardSlash(filePath), limit);
 }
 export function getObservationsByFileSymbol(db, filePath, symbolName, limit = 5) {
     return db
         .prepare(`SELECT * FROM session_observations
        WHERE file_path = ? AND symbol_name = ?
        ORDER BY created_at DESC LIMIT ?`)
-        .all(filePath, symbolName, limit);
+        .all(toForwardSlash(filePath), symbolName, limit);
 }
 export function markObservationsStale(db, filePath, symbolName, reason) {
     db.prepare(`
     UPDATE session_observations
     SET stale = 1, stale_reason = ?
     WHERE file_path = ? AND symbol_name = ? AND stale = 0
-  `).run(reason, filePath, symbolName);
+  `).run(reason, toForwardSlash(filePath), symbolName);
 }
 export function countStaleObservations(db) {
     const row = db
@@ -302,10 +308,13 @@ export function countPriorSessions(db, excludeSessionId) {
 }
 export function deleteObservationsOlderThan(db, cutoffIso) {
     db.prepare('DELETE FROM session_observations WHERE created_at < ?').run(cutoffIso);
+    db.prepare('DELETE FROM session_events WHERE timestamp < ?').run(cutoffIso);
+    db.prepare('DELETE FROM token_log WHERE timestamp < ?').run(cutoffIso);
 }
 export function deleteObservationsExceptSession(db, sessionId) {
     db.prepare('DELETE FROM session_observations WHERE session_id != ?').run(sessionId);
     db.prepare('DELETE FROM session_events WHERE session_id != ?').run(sessionId);
+    db.prepare('DELETE FROM token_log WHERE session_id != ?').run(sessionId);
 }
 export function insertSessionEvent(db, input) {
     const result = db.prepare(`
@@ -334,14 +343,41 @@ export function getSessionEvents(db, sessionId, eventTypes) {
         .all(sessionId);
 }
 export function getRecentFileChangeEvents(db, filePath, sessionId, windowMinutes) {
+    const cutoff = new Date(Date.now() - windowMinutes * 60 * 1000).toISOString();
     return db
         .prepare(`SELECT * FROM session_events
        WHERE session_id = ?
          AND file_path = ?
          AND event_type IN ('symbol_added', 'symbol_removed', 'sig_changed')
-         AND timestamp >= datetime('now', '-' || ? || ' minutes')
+         AND timestamp >= ?
        ORDER BY timestamp`)
-        .all(sessionId, filePath, windowMinutes);
+        .all(sessionId, toForwardSlash(filePath), cutoff);
+}
+/**
+ * Check if at least one session event matching the given criteria exists.
+ * Uses EXISTS + LIMIT 1 for efficiency — avoids fetching the entire event stream.
+ */
+export function hasMatchingSessionEvent(db, sessionId, eventType, filePath, symbolName) {
+    let sql = 'SELECT 1 FROM session_events WHERE session_id = ? AND event_type = ?';
+    const params = [sessionId, eventType];
+    if (filePath) {
+        sql += ' AND file_path = ?';
+        params.push(toForwardSlash(filePath));
+    }
+    if (symbolName) {
+        sql += ' AND symbol_name = ?';
+        params.push(symbolName);
+    }
+    sql += ' LIMIT 1';
+    return db.prepare(sql).get(...params) !== undefined;
+}
+/**
+ * Get the most recent session event of a given type for a specific file.
+ */
+export function getLatestSessionEvent(db, sessionId, eventType, filePath) {
+    return db.prepare(`SELECT * FROM session_events
+     WHERE session_id = ? AND event_type = ? AND file_path = ?
+     ORDER BY timestamp DESC LIMIT 1`).get(sessionId, eventType, toForwardSlash(filePath));
 }
 export function getAntiPatternEvents(db, sessionId) {
     return db

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package/dist/db/schema.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"schema.d.ts","sourceRoot":"","sources":["../../src/db/schema.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C;+DAC+D;AAC/D,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,IAAI,CAmOtD"}
+{"version":3,"file":"schema.d.ts","sourceRoot":"","sources":["../../src/db/schema.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C;+DAC+D;AAC/D,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,IAAI,CAuOtD"}

package/dist/db/schema.js

@@ -66,7 +66,10 @@ export function initSchema(db) {
     CREATE INDEX IF NOT EXISTS idx_symbols_name ON symbols(name);
     CREATE INDEX IF NOT EXISTS idx_dependencies_from ON dependencies(from_file);
     CREATE INDEX IF NOT EXISTS idx_dependencies_to ON dependencies(to_file);
+    CREATE UNIQUE INDEX IF NOT EXISTS idx_dependencies_unique ON dependencies(from_file, to_file, symbol_name);
     CREATE INDEX IF NOT EXISTS idx_usages_symbol ON usages(symbol_id);
+    CREATE INDEX IF NOT EXISTS idx_usages_used_in_file ON usages(used_in_file);
+    CREATE UNIQUE INDEX IF NOT EXISTS idx_usages_unique ON usages(symbol_id, used_in_file, used_at_line);
     CREATE INDEX IF NOT EXISTS idx_token_log_session ON token_log(session_id);
   `);
     // ─── Document Tables ───────────────────────────────────────────────────────
@@ -215,6 +218,7 @@ export function initSchema(db) {
     CREATE INDEX IF NOT EXISTS idx_session_observations_file ON session_observations(file_path);
     CREATE INDEX IF NOT EXISTS idx_session_events_session ON session_events(session_id);
     CREATE INDEX IF NOT EXISTS idx_session_events_file_time ON session_events(file_path, timestamp);
+    CREATE INDEX IF NOT EXISTS idx_session_events_type_session ON session_events(event_type, session_id);
   `);
 }
 //# sourceMappingURL=schema.js.map

package/dist/db/schema.js.map

@@ -1 +1 @@
-{"version":3,"file":"schema.js","sourceRoot":"","sources":["../../src/db/schema.ts"],"names":[],"mappings":"AAEA;+DAC+D;AAC/D,MAAM,UAAU,UAAU,CAAC,EAAqB;IAC9C,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAmEP,CAAC,CAAC;IAEH,8EAA8E;IAC9E,qEAAqE;IAErE,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;GAsBP,CAAC,CAAC;IAEH,0EAA0E;IAC1E,0BAA0B;IAC1B,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,8EAA8E;IAC9E,uEAAuE;IAEvE,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,6EAA6E;IAC7E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,6EAA6E;IAC7E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,8EAA8E;IAE9E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAuCP,CAAC,CAAC;AACL,CAAC"}
+{"version":3,"file":"schema.js","sourceRoot":"","sources":["../../src/db/schema.ts"],"names":[],"mappings":"AAEA;+DAC+D;AAC/D,MAAM,UAAU,UAAU,CAAC,EAAqB;IAC9C,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAsEP,CAAC,CAAC;IAEH,8EAA8E;IAC9E,qEAAqE;IAErE,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;GAsBP,CAAC,CAAC;IAEH,0EAA0E;IAC1E,0BAA0B;IAC1B,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,EAAE,CAAC,IAAI,CAAC;;;GAGP,CAAC,CAAC;IAEH,8EAA8E;IAC9E,uEAAuE;IAEvE,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,6EAA6E;IAC7E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,6EAA6E;IAC7E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;GAoBP,CAAC,CAAC;IAEH,8EAA8E;IAE9E,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAwCP,CAAC,CAAC;AACL,CAAC"}

package/dist/gui/server.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/gui/server.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,OAAO,EAAE,YAAY,EAAE,MAAM,WAAW,CAAC;AAGzC,OAAO,OAAO,MAAM,SAAS,CAAC;AAG9B,OAAO,EAGL,KAAK,aAAa,EACnB,MAAM,4BAA4B,CAAC;AAIpC,MAAM,WAAW,YAAY;IAC3B,KAAK,EAAE,aAAa,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,gBAAgB,EAAE,MAAM,CAAC;IACzB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,cAAc,EAAE,MAAM,CAAC;IACvB,YAAY,EAAE,MAAM,CAAC;IACrB,QAAQ,EAAE,OAAO,CAAC;IAClB,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,aAAa,EAAE,OAAO,CAAC;IACvB,cAAc,EAAE,MAAM,CAAC;CACxB;AAaD,wBAAgB,gBAAgB,CAAC,KAAK,EAAE,aAAa,GAAG,IAAI,CAAC,YAAY,EAAE,eAAe,CAAC,CAsD1F;AAID,wBAAgB,YAAY,IAAI,OAAO,CAAC,WAAW,CAqJlD;AAED,MAAM,WAAW,SAAS;IACxB,UAAU,EAAE,UAAU,CAAC,OAAO,YAAY,CAAC,CAAC;IAC5C,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC;CACxB;AAED,MAAM,WAAW,iBAAkB,SAAQ,SAAS;IAClD,IAAI,EAAE,MAAM,CAAC;CACd;AAED,wBAAgB,cAAc,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAuBvE"}
+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/gui/server.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,OAAO,EAAE,YAAY,EAAE,MAAM,WAAW,CAAC;AAGzC,OAAO,OAAO,MAAM,SAAS,CAAC;AAG9B,OAAO,EAGL,KAAK,aAAa,EACnB,MAAM,4BAA4B,CAAC;AAIpC,MAAM,WAAW,YAAY;IAC3B,KAAK,EAAE,aAAa,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,gBAAgB,EAAE,MAAM,CAAC;IACzB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,cAAc,EAAE,MAAM,CAAC;IACvB,YAAY,EAAE,MAAM,CAAC;IACrB,QAAQ,EAAE,OAAO,CAAC;IAClB,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,aAAa,EAAE,OAAO,CAAC;IACvB,cAAc,EAAE,MAAM,CAAC;CACxB;AAaD,wBAAgB,gBAAgB,CAAC,KAAK,EAAE,aAAa,GAAG,IAAI,CAAC,YAAY,EAAE,eAAe,CAAC,CAuD1F;AAID,wBAAgB,YAAY,IAAI,OAAO,CAAC,WAAW,CAmKlD;AAED,MAAM,WAAW,SAAS;IACxB,UAAU,EAAE,UAAU,CAAC,OAAO,YAAY,CAAC,CAAC;IAC5C,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC;CACxB;AAED,MAAM,WAAW,iBAAkB,SAAQ,SAAS;IAClD,IAAI,EAAE,MAAM,CAAC;CACd;AAED,wBAAgB,cAAc,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,CAAC,CA2BvE"}

package/dist/gui/server.js

@@ -59,7 +59,8 @@ export function loadProjectStats(entry) {
             indexSizeBytes,
         };
     }
-    catch {
+    catch (err) {
+        process.stderr.write(`[pindex] Failed to load stats for project "${entry.name}": ${err}\n`);
         return {
             entry, fileCount: 0, symbolCount: 0,
             totalTokensSaved: 0, totalTokensActual: 0,
@@ -75,13 +76,24 @@ export function loadProjectStats(entry) {
 export function createGuiApp() {
     const app = express();
     app.use(express.json());
+    // Cache registry reads with a 5-second TTL to avoid re-reading the file on every request
+    let registryCache = null;
+    let registryCacheTime = 0;
+    const REGISTRY_TTL_MS = 5000;
+    function getCachedRegistry() {
+        const now = Date.now();
+        if (!registryCache || now - registryCacheTime > REGISTRY_TTL_MS) {
+            registryCache = new GlobalRegistry().list();
+            registryCacheTime = now;
+        }
+        return registryCache;
+    }
     app.get('/api/projects', (_req, res) => {
-        const registry = new GlobalRegistry();
-        const projects = registry.list().map(loadProjectStats);
+        const projects = getCachedRegistry().map(loadProjectStats);
         res.json(projects);
     });
     app.get('/api/projects/:hash/detail', (req, res) => {
-        const registry = new GlobalRegistry();
+        const registry = { list: getCachedRegistry };
         const entry = registry.list().find((p) => p.hash === req.params.hash);
         if (!entry)
             return res.status(404).json({ error: 'project not found' });
@@ -99,7 +111,8 @@ export function createGuiApp() {
          FROM token_log ORDER BY timestamp DESC LIMIT 200`).all();
             return res.json({ files, symbols, tokenLog });
         }
-        catch {
+        catch (err) {
+            process.stderr.write(`[pindex] DB query failed for project detail ${req.params.hash}: ${err}\n`);
             return res.json({ files: [], symbols: [], tokenLog: [] });
         }
         finally {
@@ -107,7 +120,7 @@ export function createGuiApp() {
         }
     });
     app.get('/api/projects/:hash/sessions', (req, res) => {
-        const registry = new GlobalRegistry();
+        const registry = { list: getCachedRegistry };
         const entry = registry.list().find((p) => p.hash === req.params.hash);
         if (!entry)
             return res.status(404).json({ error: 'project not found' });
@@ -122,7 +135,8 @@ export function createGuiApp() {
                 .all();
             return res.json(sessions);
         }
-        catch {
+        catch (err) {
+            process.stderr.write(`[pindex] DB query failed for sessions ${req.params.hash}: ${err}\n`);
             return res.json([]);
         }
         finally {
@@ -130,7 +144,7 @@ export function createGuiApp() {
         }
     });
     app.get('/api/overview', async (_req, res) => {
-        const registry = new GlobalRegistry();
+        const registry = { list: getCachedRegistry };
         const entries = registry.list();
         const baseStats = entries.map(loadProjectStats);
         // Check monitoring ports in parallel to detect running pindex-server instances
@@ -153,7 +167,7 @@ export function createGuiApp() {
         res.json({ overview, projects: stats });
     });
     app.get('/api/sessions/recent', (_req, res) => {
-        const registry = new GlobalRegistry();
+        const registry = { list: getCachedRegistry };
         const all = [];
         for (const entry of registry.list()) {
             const dbPath = getProjectIndexPath(entry.path);
@@ -169,7 +183,9 @@ export function createGuiApp() {
                     .all();
                 rows.forEach(r => all.push({ ...r, projectName: entry.name, projectHash: entry.hash }));
             }
-            catch { /* skip */ }
+            catch (err) {
+                process.stderr.write(`[pindex] Failed to read sessions for "${entry.name}": ${err}\n`);
+            }
             finally {
                 db?.close();
             }
@@ -194,7 +210,7 @@ export function createGuiApp() {
         return res.json(result);
     });
     app.get('/api/projects/:hash/open', async (req, res) => {
-        const registry = new GlobalRegistry();
+        const registry = { list: getCachedRegistry };
         const entry = registry.list().find((p) => p.hash === req.params.hash);
         if (!entry)
             return res.status(404).json({ error: 'project not found' });
@@ -226,7 +242,11 @@ export function startGuiServer(port) {
             httpServer.close();
             reject(err);
         });
-        httpServer.listen(port);
+        // Bind to loopback by default. The GUI exposes aggregated project data
+        // across ALL registered PindeX projects and must not be reachable from
+        // other hosts without an explicit opt-in via PINDEX_BIND_HOST.
+        const bindHost = process.env.PINDEX_BIND_HOST ?? '127.0.0.1';
+        httpServer.listen(port, bindHost);
     });
 }
 // ─── Inline Dashboard HTML ─────────────────────────────────────────────────

package/dist/gui/server.js.map

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package/dist/index.js

@@ -10,7 +10,6 @@ import { createMcpServer } from './server.js';
 import { createSession, deleteObservationsOlderThan, deleteObservationsExceptSession, } from './db/queries.js';
 import { getProjectIndexPath } from './cli/project-detector.js';
 import { SessionObserver } from './memory/observer.js';
-import { EventEmitter } from 'node:events';
 import { v4 as uuidv4 } from 'uuid';
 // ─── Configuration (from environment variables) ───────────────────────────────
 const INDEX_PATH = process.env.INDEX_PATH ?? './.codebase-index/index.db';
@@ -23,6 +22,10 @@ const BASELINE_MODE = process.env.BASELINE_MODE === 'true';
 const GENERATE_SUMMARIES = process.env.GENERATE_SUMMARIES === 'true';
 // 'permanent' | 'session' | '7d' | '30d' | ...
 const OBSERVATION_RETENTION = process.env.OBSERVATION_RETENTION ?? 'permanent';
+// Summarizer configuration
+const SUMMARIZER_API_KEY = process.env.SUMMARIZER_API_KEY ?? '';
+const SUMMARIZER_BASE_URL = process.env.SUMMARIZER_BASE_URL ?? 'https://api.openai.com/v1';
+const SUMMARIZER_MODEL = process.env.SUMMARIZER_MODEL ?? 'gpt-4o-mini';
 // Federated repos: colon- or comma-separated absolute paths
 const FEDERATION_REPOS = (process.env.FEDERATION_REPOS ?? '')
     .split(/[:，,]/)
@@ -45,16 +48,26 @@ async function main() {
         }
     }).filter((x) => x !== null);
     // 2. Set up the indexer
+    if (GENERATE_SUMMARIES && !SUMMARIZER_API_KEY) {
+        process.stderr.write('[pindex] Warning: GENERATE_SUMMARIES=true but no SUMMARIZER_API_KEY set\n');
+    }
     const indexer = new Indexer({
         db,
         projectRoot: PROJECT_ROOT,
         languages: LANGUAGES,
         generateSummaries: GENERATE_SUMMARIES,
+        summarizerOptions: {
+            enabled: GENERATE_SUMMARIES,
+            apiKey: SUMMARIZER_API_KEY,
+            baseUrl: SUMMARIZER_BASE_URL,
+            model: SUMMARIZER_MODEL,
+        },
+    });
+    // 3. Initial indexing (non-blocking) — log errors instead of swallowing
+    indexer.indexAll().then(() => indexer.resolveDependencies()).catch((err) => {
+        process.stderr.write(`[pindex] Initial indexing failed: ${String(err)}\n`);
     });
-    // 3. Initial indexing (non-blocking)
-    indexer.indexAll().then(() => indexer.resolveDependencies()).catch(() => { });
     // 4. Start monitoring server
-    const emitter = new EventEmitter();
     const monitoringServer = startMonitoringServer(db, MONITORING_PORT);
     if (MONITORING_AUTO_OPEN) {
         const { default: open } = await import('open');
@@ -63,14 +76,17 @@ async function main() {
     // 5. Set up token logger + session observer for the current session
     const sessionId = uuidv4();
     createSession(db, { id: sessionId, mode: BASELINE_MODE ? 'baseline' : 'indexed', label: null });
-    const tokenLogger = new TokenLogger({ db, sessionId, emitter });
+    const tokenLogger = new TokenLogger({ db, sessionId });
     const observer = new SessionObserver({ db, sessionId, projectRoot: PROJECT_ROOT });
     // 5b. Observation retention cleanup
     applyObservationRetention(db, sessionId, OBSERVATION_RETENTION);
     // 6. Start file watcher
+    let watcher = null;
     if (AUTO_REINDEX) {
-        const watcher = new FileWatcher({ db, indexer, projectRoot: PROJECT_ROOT, observer });
-        watcher.start().catch(() => { });
+        watcher = new FileWatcher({ db, indexer, projectRoot: PROJECT_ROOT, languages: LANGUAGES, observer });
+        watcher.start().catch((err) => {
+            process.stderr.write(`[pindex] File watcher failed to start: ${String(err)}\n`);
+        });
     }
     // 7. Create and start the MCP server
     const server = createMcpServer(db, indexer, tokenLogger, monitoringServer, {
@@ -83,6 +99,29 @@ async function main() {
     });
     const transport = new StdioServerTransport();
     await server.connect(transport);
+    // ─── Graceful Shutdown ──────────────────────────────────────────────────
+    const cleanup = async () => {
+        try {
+            if (watcher)
+                await watcher.stop();
+            await indexer.closePool();
+            await monitoringServer.close();
+            for (const fed of federatedDbs) {
+                try {
+                    fed.db.close();
+                }
+                catch { /* ignore */ }
+            }
+            db.close();
+        }
+        catch { /* best effort */ }
+    };
+    process.on('SIGTERM', () => {
+        cleanup().finally(() => process.exit(0));
+    });
+    process.on('SIGINT', () => {
+        cleanup().finally(() => process.exit(0));
+    });
 }
 // Catch any unhandled exception / rejection and exit so Claude Code auto-restarts the server.
 process.on('uncaughtException', (err) => {

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package/dist/indexer/index.d.ts

@@ -1,13 +1,20 @@
 import type Database from 'better-sqlite3';
-import type { IndexResult } from '../types.js';
+import type { IndexResult, ParsedImport } from '../types.js';
 import { type AstDiffResult } from '../memory/ast-diff.js';
+import { type SummarizerOptions } from './summarizer.js';
+/** Glob patterns per language name (as used in EXTENSION_MAP). */
+export declare const LANGUAGE_PATTERNS: Record<string, string[]>;
 export interface IndexerOptions {
     db: Database.Database;
     projectRoot: string;
     languages?: string[];
     ignorePatterns?: string[];
     generateSummaries?: boolean;
+    summarizerOptions?: SummarizerOptions;
     documentPatterns?: string[];
+    /** 0 = run parsing synchronously on main (test / small-project mode).
+     *  undefined = auto-select based on CPU count. */
+    maxParseWorkers?: number;
 }
 export interface IndexAllOptions {
     additionalPaths?: string[];
@@ -25,16 +32,28 @@ export declare class Indexer {
     private readonly languages;
     private readonly ignorePatterns;
     private readonly generateSummaries;
+    private readonly summarizer;
     private readonly documentPatterns;
+    private pool;
+    private readonly configuredMaxWorkers;
+    private lastImportsCache;
     constructor(options: IndexerOptions);
     /** Discovers and indexes all source files and document files in the project root. */
     indexAll(options?: IndexAllOptions): Promise<IndexResult>;
     /** Indexes (or re-indexes) a single file given its project-relative path. */
     indexFile(relativePath: string, force?: boolean): Promise<IndexFileResult>;
+    /** Everything that happens after a file has been read, parsed, and hashed.
+     *  Runs entirely on the main thread: summarizer → AST diff → DB transaction. */
+    private processParsedFile;
     /** Indexes (or re-indexes) a single document file given its project-relative path. */
     indexDocument(relativePath: string, force?: boolean): Promise<IndexFileResult>;
-    /** Second-pass: resolves import strings to file IDs and stores dependencies. */
-    resolveDependencies(): Promise<void>;
+    /** Resolves import strings to file IDs and stores dependencies.
+     *  Fast path: pass an importsCache built during indexAll() to skip re-reading
+     *  and re-parsing every file. Slow path (no cache) re-parses as before. */
+    resolveDependencies(importsCache?: Map<string, ParsedImport[]>): Promise<void>;
+    /** Terminates any worker threads owned by the parse pool. Safe to call
+     *  multiple times; no-op when no pool was ever constructed. */
+    closePool(): Promise<void>;
     /** Resolves a relative import path to a project-relative file path. */
     private resolveImportPath;
 }