pi-harness-runtime 0.9.2 → 0.9.5

package/packages/memory-engine/dist/engine.d.ts

@@ -14,9 +14,11 @@ export declare class MemoryEngine {
     private bundle;
     private ensureBundle;
     /**
-     * Load an OKF bundle from a directory path
+     * Load an OKF bundle from a directory path.
+     * Recursively reads all .md files, parses frontmatter + body,
+     * and builds the in-memory concept index.
      */
-    loadBundle(path: string): Promise<KnowledgeBundle>;
+    loadBundle(bundlePath: string): Promise<KnowledgeBundle>;
     /**
      * Validate a bundle
      */
@@ -26,23 +28,29 @@ export declare class MemoryEngine {
      */
     search(query: KnowledgeQuery): KnowledgeResult[];
     /**
-     * Write a new concept
+     * Write a new concept (RFC-0060)
+     *
+     * Persists to disk at {bundle.path}/{id}.md and updates bundle index.
+     * File name is derived from the title slug (first 64 chars).
      */
-    writeConcept(request: WriteConceptRequest): OkfConcept;
+    writeConcept(request: WriteConceptRequest): Promise<OkfConcept>;
     /**
      * Promote a concept from the blackboard
      */
     promoteFromBlackboard(blackboardContent: string, metadata: Record<string, unknown>): WriteConceptRequest;
     /**
-     * Rebuild the index
+     * Rebuild the index from disk and persist index.md to bundle directory.
      */
-    rebuildIndex(path: string): Promise<void>;
+    rebuildIndex(bundlePath?: string): Promise<void>;
     /**
      * Get the current bundle
      */
     getBundle(): KnowledgeBundle | null;
     /**
-     * Export a concept to OKF format
+     * Export a concept to OKF format (RFC-0060)
+     *
+     * Excludes bundle-level metadata fields (index, log, directories)
+     * from the concept frontmatter to ensure clean round-trip parsing.
      */
     exportToOkf(concept: OkfConcept): string;
 }

package/packages/memory-engine/dist/engine.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../src/engine.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAGH,OAAO,KAAK,EACX,UAAU,EAEV,OAAO,EACP,eAAe,EACf,gBAAgB,EAEhB,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,MAAM,YAAY,CAAC;AAmEpB;;;GAGG;AACH,wBAAgB,YAAY,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,EAAE,CAcxD;AAID,wBAAgB,eAAe,CAC9B,OAAO,EAAE,MAAM,EACf,IAAI,EAAE,MAAM,GACV,gBAAgB,CA0ClB;AA8GD,qBAAa,YAAY;IACxB,OAAO,CAAC,MAAM,CAAgC;IAE9C,OAAO,CAAC,YAAY;IAcpB;;OAEG;IACG,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC;IAaxD;;OAEG;IACH,cAAc,CAAC,MAAM,EAAE,eAAe,GAAG,gBAAgB;IAqBzD;;OAEG;IACH,MAAM,CAAC,KAAK,EAAE,cAAc,GAAG,eAAe,EAAE;IAgDhD;;OAEG;IACH,YAAY,CAAC,OAAO,EAAE,mBAAmB,GAAG,UAAU;IAyBtD;;OAEG;IACH,qBAAqB,CACpB,iBAAiB,EAAE,MAAM,EACzB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAC/B,mBAAmB;IActB;;OAEG;IACG,YAAY,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAU/C;;OAEG;IACH,SAAS,IAAI,eAAe,GAAG,IAAI;IAInC;;OAEG;IACH,WAAW,CAAC,OAAO,EAAE,UAAU,GAAG,MAAM;CA2BxC;AAID,wBAAgB,kBAAkB,IAAI,YAAY,CAEjD"}
+{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../src/engine.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAMH,OAAO,KAAK,EACX,UAAU,EAEV,OAAO,EACP,eAAe,EAEf,gBAAgB,EAEhB,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,MAAM,YAAY,CAAC;AAmEpB;;;GAGG;AACH,wBAAgB,YAAY,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,EAAE,CAcxD;AAID,wBAAgB,eAAe,CAC9B,OAAO,EAAE,MAAM,EACf,IAAI,EAAE,MAAM,GACV,gBAAgB,CA0ClB;AA8GD,qBAAa,YAAY;IACxB,OAAO,CAAC,MAAM,CAAgC;IAE9C,OAAO,CAAC,YAAY;IAcpB;;;;OAIG;IACG,UAAU,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC,CA0F7D;IAED;;OAEG;IACH,cAAc,CAAC,MAAM,EAAE,eAAe,GAAG,gBAAgB,CAmBxD;IAED;;OAEG;IACH,MAAM,CAAC,KAAK,EAAE,cAAc,GAAG,eAAe,EAAE,CA8C/C;IAED;;;;;OAKG;IACG,YAAY,CAAC,OAAO,EAAE,mBAAmB,GAAG,OAAO,CAAC,UAAU,CAAC,CAyCpE;IAED;;OAEG;IACH,qBAAqB,CACpB,iBAAiB,EAAE,MAAM,EACzB,QAAQ,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAC/B,mBAAmB,CAYrB;IAED;;OAEG;IACG,YAAY,CAAC,UAAU,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAkBrD;IAED;;OAEG;IACH,SAAS,IAAI,eAAe,GAAG,IAAI,CAElC;IAED;;;;;OAKG;IACH,WAAW,CAAC,OAAO,EAAE,UAAU,GAAG,MAAM,CAgDvC;CACD;AAID,wBAAgB,kBAAkB,IAAI,YAAY,CAEjD"}

package/packages/memory-engine/dist/engine.js

@@ -4,6 +4,9 @@
  * Manages durable knowledge using Google's Open Knowledge Format (OKF).
  */
 import { randomUUID } from "node:crypto";
+import * as fs from "node:fs/promises";
+import * as path from "node:path";
+import { RESERVED_FILES } from "./types.js";
 import { filterSecrets, AUTHORITY_PRIORITY } from "./types.js";
 // ─── YAML Frontmatter Parsing ─────────────────────────────────────────────────
 function parseFrontmatter(content) {
@@ -217,19 +220,87 @@ export class MemoryEngine {
         return this.bundle;
     }
     /**
-     * Load an OKF bundle from a directory path
+     * Load an OKF bundle from a directory path.
+     * Recursively reads all .md files, parses frontmatter + body,
+     * and builds the in-memory concept index.
      */
-    async loadBundle(path) {
-        // In a real implementation, this would recursively read files from disk
-        // For now, we return an empty bundle
-        this.bundle = {
-            path,
-            concepts: [],
+    async loadBundle(bundlePath) {
+        const concepts = [];
+        const directories = [];
+        // Walk directory recursively for .md files
+        async function walkDir(dir) {
+            let entries;
+            try {
+                entries = await fs.readdir(dir, { withFileTypes: true });
+            }
+            catch {
+                return; // Ignore missing directories
+            }
+            for (const entry of entries) {
+                const fullPath = path.join(dir, entry.name);
+                if (entry.isDirectory()) {
+                    if (!entry.name.startsWith(".") && entry.name !== "node_modules") {
+                        directories.push({
+                            path: path.relative(bundlePath, fullPath),
+                            name: entry.name,
+                            files: [],
+                            subdirectories: [],
+                        });
+                        await walkDir(fullPath);
+                    }
+                }
+                else if (entry.name.endsWith(".md") &&
+                    !RESERVED_FILES.includes(entry.name)) {
+                    const content = await fs.readFile(fullPath, "utf-8").catch(() => "");
+                    const parsed = parseFrontmatter(content);
+                    if (parsed && parsed.frontmatter.type) {
+                        const id = path.relative(bundlePath, fullPath).replace(/\.md$/, "");
+                        concepts.push({
+                            id,
+                            type: parsed.frontmatter.type,
+                            title: parsed.frontmatter.title,
+                            description: parsed.frontmatter.description,
+                            resource: parsed.frontmatter.resource,
+                            tags: parsed.frontmatter.tags || [],
+                            timestamp: parsed.frontmatter.timestamp,
+                            metadata: { ...parsed.frontmatter },
+                            body: parsed.body,
+                            links: extractLinks(parsed.body),
+                        });
+                        // Prune OKF-reserved fields from metadata (they are top-level on OkfConcept)
+                        delete concepts[concepts.length - 1].metadata["type"];
+                        delete concepts[concepts.length - 1].metadata["title"];
+                        delete concepts[concepts.length - 1].metadata["tags"];
+                        delete concepts[concepts.length - 1].metadata["timestamp"];
+                    }
+                }
+            }
+        }
+        await walkDir(bundlePath);
+        const bundle = {
+            path: bundlePath,
+            concepts,
             index: "",
             log: "",
-            directories: [],
+            directories,
         };
-        return this.bundle;
+        // Load reserved files: index.md and log.md
+        const [indexPath, logPath] = ["index.md", "log.md"].map((f) => path.join(bundlePath, f));
+        try {
+            bundle.index = await fs.readFile(indexPath, "utf-8");
+        }
+        catch {
+            // No index yet — generate fresh
+            bundle.index = generateIndex(concepts);
+        }
+        try {
+            bundle.log = await fs.readFile(logPath, "utf-8");
+        }
+        catch {
+            // No log yet — that's fine
+        }
+        this.bundle = bundle;
+        return bundle;
     }
     /**
      * Validate a bundle
@@ -295,10 +366,21 @@ export class MemoryEngine {
         return results;
     }
     /**
-     * Write a new concept
+     * Write a new concept (RFC-0060)
+     *
+     * Persists to disk at {bundle.path}/{id}.md and updates bundle index.
+     * File name is derived from the title slug (first 64 chars).
      */
-    writeConcept(request) {
-        const id = randomUUID();
+    async writeConcept(request) {
+        const id = request.title
+            ? request.title
+                .toLowerCase()
+                .replace(/[^a-z0-9]+/g, "-")
+                .replace(/^-|-$/g, "")
+                .slice(0, 64) +
+                "-" +
+                randomUUID().slice(0, 8)
+            : randomUUID();
         const timestamp = new Date().toISOString();
         const concept = {
             id,
@@ -314,6 +396,13 @@ export class MemoryEngine {
             links: request.links || [],
         };
         const bundle = this.ensureBundle();
+        // Persist to disk
+        if (bundle.path && bundle.path !== "memory://in-memory") {
+            const filePath = path.join(bundle.path, `${id}.md`);
+            const okfContent = this.exportToOkf(concept);
+            await fs.mkdir(bundle.path, { recursive: true });
+            await fs.writeFile(filePath, okfContent, "utf-8");
+        }
         bundle.concepts.push(concept);
         bundle.index = generateIndex(bundle.concepts);
         return concept;
@@ -334,14 +423,23 @@ export class MemoryEngine {
         };
     }
     /**
-     * Rebuild the index
+     * Rebuild the index from disk and persist index.md to bundle directory.
      */
-    async rebuildIndex(path) {
-        if (!this.bundle || this.bundle.path !== path) {
-            await this.loadBundle(path);
+    async rebuildIndex(bundlePath) {
+        const targetPath = bundlePath ?? this.bundle?.path;
+        if (!targetPath || targetPath === "memory://in-memory") {
+            if (this.bundle) {
+                this.bundle.index = generateIndex(this.bundle.concepts);
+            }
+            return;
+        }
+        if (!this.bundle || this.bundle.path !== targetPath) {
+            await this.loadBundle(targetPath);
         }
         if (this.bundle) {
             this.bundle.index = generateIndex(this.bundle.concepts);
+            const indexPath = path.join(targetPath, "index.md");
+            await fs.writeFile(indexPath, this.bundle.index, "utf-8");
         }
     }
     /**
@@ -351,19 +449,44 @@ export class MemoryEngine {
         return this.bundle;
     }
     /**
-     * Export a concept to OKF format
+     * Export a concept to OKF format (RFC-0060)
+     *
+     * Excludes bundle-level metadata fields (index, log, directories)
+     * from the concept frontmatter to ensure clean round-trip parsing.
      */
     exportToOkf(concept) {
-        const frontmatter = {
-            type: concept.type,
-            title: concept.title,
-            tags: concept.tags,
-            timestamp: concept.timestamp,
-            ...concept.metadata,
-        };
+        // Collect concept-level metadata only, excluding top-level OKF fields
+        // and any bundle-level reserved fields that might be present.
+        const reserved = new Set([
+            "id",
+            "type",
+            "title",
+            "description",
+            "resource",
+            "tags",
+            "timestamp",
+            "body",
+            "links",
+            "index",
+            "log",
+            "directories",
+        ]);
+        const conceptMetadata = {};
+        const meta = concept.metadata ?? {};
+        for (const [k, v] of Object.entries(meta)) {
+            if (!reserved.has(k)) {
+                conceptMetadata[k] = v;
+            }
+        }
         const lines = [
             "---",
-            serializeFrontmatter(frontmatter),
+            serializeFrontmatter({
+                type: concept.type,
+                title: concept.title,
+                tags: concept.tags,
+                timestamp: concept.timestamp,
+                ...conceptMetadata,
+            }),
             "---",
             "",
             concept.body,

package/packages/memory-engine/dist/engine.js.map

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package/packages/memory-engine/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@pi-harness/memory-engine",
-  "version": "0.9.1",
+  "version": "0.9.5",
   "description": "Memory engine with OKF integration for durable knowledge management (RFC-0060)",
   "type": "module",
   "main": "./dist/index.js",
@@ -18,6 +18,6 @@
   },
   "devDependencies": {
     "@types/node": "^22.0.0",
-    "typescript": "^5.5.0"
+    "typescript": "^7.0.2"
   }
 }

package/packages/memory-engine/src/engine.ts

@@ -5,11 +5,15 @@
  */
 
 import { randomUUID } from "node:crypto";
+import * as fs from "node:fs/promises";
+import * as path from "node:path";
+import { RESERVED_FILES } from "./types.js";
 import type {
 	OkfConcept,
 	OkfFrontmatter,
 	OkfLink,
 	KnowledgeBundle,
+	KnowledgeDirectory,
 	ValidationResult,
 	ValidationError,
 	KnowledgeQuery,
@@ -277,19 +281,100 @@ export class MemoryEngine {
 	}
 
 	/**
-	 * Load an OKF bundle from a directory path
+	 * Load an OKF bundle from a directory path.
+	 * Recursively reads all .md files, parses frontmatter + body,
+	 * and builds the in-memory concept index.
 	 */
-	async loadBundle(path: string): Promise<KnowledgeBundle> {
-		// In a real implementation, this would recursively read files from disk
-		// For now, we return an empty bundle
-		this.bundle = {
-			path,
-			concepts: [],
+	async loadBundle(bundlePath: string): Promise<KnowledgeBundle> {
+		const concepts: OkfConcept[] = [];
+		const directories: KnowledgeDirectory[] = [];
+
+		// Walk directory recursively for .md files
+		async function walkDir(dir: string): Promise<void> {
+			let entries;
+			try {
+				entries = await fs.readdir(dir, { withFileTypes: true });
+			} catch {
+				return; // Ignore missing directories
+			}
+			for (const entry of entries) {
+				const fullPath = path.join(dir, entry.name);
+				if (entry.isDirectory()) {
+					if (!entry.name.startsWith(".") && entry.name !== "node_modules") {
+						directories.push({
+							path: path.relative(bundlePath, fullPath),
+							name: entry.name,
+							files: [],
+							subdirectories: [],
+						});
+						await walkDir(fullPath);
+					}
+				} else if (
+					entry.name.endsWith(".md") &&
+					!RESERVED_FILES.includes(entry.name)
+				) {
+					const content = await fs.readFile(fullPath, "utf-8").catch(() => "");
+					const parsed = parseFrontmatter(content);
+					if (parsed && parsed.frontmatter.type) {
+						const id = path.relative(bundlePath, fullPath).replace(/\.md$/, "");
+						concepts.push({
+							id,
+							type: parsed.frontmatter.type as string,
+							title: parsed.frontmatter.title as string | undefined,
+							description: parsed.frontmatter.description as string | undefined,
+							resource: parsed.frontmatter.resource as string | undefined,
+							tags: (parsed.frontmatter.tags as string[]) || [],
+							timestamp: parsed.frontmatter.timestamp as string | undefined,
+							metadata: { ...parsed.frontmatter },
+							body: parsed.body,
+							links: extractLinks(parsed.body),
+						});
+						// Prune OKF-reserved fields from metadata (they are top-level on OkfConcept)
+						delete (
+							concepts[concepts.length - 1].metadata as Record<string, unknown>
+						)["type"];
+						delete (
+							concepts[concepts.length - 1].metadata as Record<string, unknown>
+						)["title"];
+						delete (
+							concepts[concepts.length - 1].metadata as Record<string, unknown>
+						)["tags"];
+						delete (
+							concepts[concepts.length - 1].metadata as Record<string, unknown>
+						)["timestamp"];
+					}
+				}
+			}
+		}
+
+		await walkDir(bundlePath);
+
+		const bundle: KnowledgeBundle = {
+			path: bundlePath,
+			concepts,
 			index: "",
 			log: "",
-			directories: [],
+			directories,
 		};
-		return this.bundle;
+
+		// Load reserved files: index.md and log.md
+		const [indexPath, logPath] = ["index.md", "log.md"].map((f) =>
+			path.join(bundlePath, f),
+		);
+		try {
+			bundle.index = await fs.readFile(indexPath, "utf-8");
+		} catch {
+			// No index yet — generate fresh
+			bundle.index = generateIndex(concepts);
+		}
+		try {
+			bundle.log = await fs.readFile(logPath, "utf-8");
+		} catch {
+			// No log yet — that's fine
+		}
+
+		this.bundle = bundle;
+		return bundle;
 	}
 
 	/**
@@ -368,10 +453,22 @@ export class MemoryEngine {
 	}
 
 	/**
-	 * Write a new concept
+	 * Write a new concept (RFC-0060)
+	 *
+	 * Persists to disk at {bundle.path}/{id}.md and updates bundle index.
+	 * File name is derived from the title slug (first 64 chars).
 	 */
-	writeConcept(request: WriteConceptRequest): OkfConcept {
-		const id = randomUUID();
+	async writeConcept(request: WriteConceptRequest): Promise<OkfConcept> {
+		const id = request.title
+			? request.title
+					.toLowerCase()
+					.replace(/[^a-z0-9]+/g, "-")
+					.replace(/^-|-$/g, "")
+					.slice(0, 64) +
+				"-" +
+				randomUUID().slice(0, 8)
+			: randomUUID();
+
 		const timestamp = new Date().toISOString();
 
 		const concept: OkfConcept = {
@@ -389,6 +486,15 @@ export class MemoryEngine {
 		};
 
 		const bundle = this.ensureBundle();
+
+		// Persist to disk
+		if (bundle.path && bundle.path !== "memory://in-memory") {
+			const filePath = path.join(bundle.path, `${id}.md`);
+			const okfContent = this.exportToOkf(concept);
+			await fs.mkdir(bundle.path, { recursive: true });
+			await fs.writeFile(filePath, okfContent, "utf-8");
+		}
+
 		bundle.concepts.push(concept);
 		bundle.index = generateIndex(bundle.concepts);
 
@@ -416,15 +522,25 @@ export class MemoryEngine {
 	}
 
 	/**
-	 * Rebuild the index
+	 * Rebuild the index from disk and persist index.md to bundle directory.
 	 */
-	async rebuildIndex(path: string): Promise<void> {
-		if (!this.bundle || this.bundle.path !== path) {
-			await this.loadBundle(path);
+	async rebuildIndex(bundlePath?: string): Promise<void> {
+		const targetPath = bundlePath ?? this.bundle?.path;
+		if (!targetPath || targetPath === "memory://in-memory") {
+			if (this.bundle) {
+				this.bundle.index = generateIndex(this.bundle.concepts);
+			}
+			return;
+		}
+
+		if (!this.bundle || this.bundle.path !== targetPath) {
+			await this.loadBundle(targetPath);
 		}
 
 		if (this.bundle) {
 			this.bundle.index = generateIndex(this.bundle.concepts);
+			const indexPath = path.join(targetPath, "index.md");
+			await fs.writeFile(indexPath, this.bundle.index, "utf-8");
 		}
 	}
 
@@ -436,20 +552,45 @@ export class MemoryEngine {
 	}
 
 	/**
-	 * Export a concept to OKF format
+	 * Export a concept to OKF format (RFC-0060)
+	 *
+	 * Excludes bundle-level metadata fields (index, log, directories)
+	 * from the concept frontmatter to ensure clean round-trip parsing.
 	 */
 	exportToOkf(concept: OkfConcept): string {
-		const frontmatter: OkfFrontmatter = {
-			type: concept.type,
-			title: concept.title,
-			tags: concept.tags,
-			timestamp: concept.timestamp,
-			...concept.metadata,
-		};
+		// Collect concept-level metadata only, excluding top-level OKF fields
+		// and any bundle-level reserved fields that might be present.
+		const reserved = new Set([
+			"id",
+			"type",
+			"title",
+			"description",
+			"resource",
+			"tags",
+			"timestamp",
+			"body",
+			"links",
+			"index",
+			"log",
+			"directories",
+		]);
+		const conceptMetadata: Record<string, unknown> = {};
+		const meta = concept.metadata ?? {};
+		for (const [k, v] of Object.entries(meta)) {
+			if (!reserved.has(k)) {
+				conceptMetadata[k] = v;
+			}
+		}
 
 		const lines = [
 			"---",
-			serializeFrontmatter(frontmatter),
+			serializeFrontmatter({
+				type: concept.type,
+				title: concept.title,
+				tags: concept.tags,
+				timestamp: concept.timestamp,
+				...conceptMetadata,
+			}),
 			"---",
 			"",
 			concept.body,