phyloio 2.1.0 → 2.2.2

package/{src_phylo_compare → dist-jest}/phylo.js

@@ -6,7 +6,6 @@
  * or disable the default devtool with "devtool: false".
  * If you are looking for production-ready output files, see mode: "production" (https://webpack.js.org/configuration/mode/).
  */
-var PhyloIO;
 /******/ (() => { // webpackBootstrap
 /******/ 	var __webpack_modules__ = ({
 
@@ -1229,17 +1228,6 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 
 /***/ }),
 
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-/*!******************************************************************************************!*\
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-  \******************************************************************************************/
-/***/ ((module, __webpack_exports__, __webpack_require__) => {
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-"use strict";
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MIT License)\\n * Copyright 2022 Fonticons, Inc.\\n */\\n.fa {\\n  font-family: var(--fa-style-family, \\\"Font Awesome 6 Free\\\");\\n  font-weight: var(--fa-style, 900); }\\n\\n.fa,\\n.fa-classic,\\n.fa-sharp,\\n.fas,\\n.fa-solid,\\n.far,\\n.fa-regular,\\n.fab,\\n.fa-brands {\\n  -moz-osx-font-smoothing: grayscale;\\n  -webkit-font-smoothing: antialiased;\\n  display: var(--fa-display, inline-block);\\n  font-style: normal;\\n  font-variant: normal;\\n  line-height: 1;\\n  text-rendering: auto; }\\n\\n.fas,\\n.fa-classic,\\n.fa-solid,\\n.far,\\n.fa-regular {\\n  font-family: 'Font Awesome 6 Free'; }\\n\\n.fab,\\n.fa-brands {\\n  font-family: 'Font Awesome 6 Brands'; }\\n\\n.fa-1x {\\n  font-size: 1em; }\\n\\n.fa-2x {\\n  font-size: 2em; }\\n\\n.fa-3x {\\n  font-size: 3em; }\\n\\n.fa-4x {\\n  font-size: 4em; }\\n\\n.fa-5x {\\n  font-size: 5em; }\\n\\n.fa-6x {\\n  font-size: 6em; }\\n\\n.fa-7x {\\n  font-size: 7em; }\\n\\n.fa-8x {\\n  font-size: 8em; }\\n\\n.fa-9x {\\n  font-size: 9em; }\\n\\n.fa-10x {\\n  font-size: 10em; }\\n\\n.fa-2xs {\\n  font-size: 0.625em;\\n  line-height: 0.1em;\\n  vertical-align: 0.225em; }\\n\\n.fa-xs {\\n  font-size: 0.75em;\\n  line-height: 0.08333em;\\n  vertical-align: 0.125em; }\\n\\n.fa-sm {\\n  font-size: 0.875em;\\n  line-height: 0.07143em;\\n  vertical-align: 0.05357em; }\\n\\n.fa-lg {\\n  font-size: 1.25em;\\n  line-height: 0.05em;\\n  vertical-align: -0.075em; }\\n\\n.fa-xl {\\n  font-size: 1.5em;\\n  line-height: 0.04167em;\\n  vertical-align: -0.125em; }\\n\\n.fa-2xl {\\n  font-size: 2em;\\n  line-height: 0.03125em;\\n  vertical-align: -0.1875em; }\\n\\n.fa-fw {\\n  text-align: center;\\n  width: 1.25em; }\\n\\n.fa-ul {\\n  list-style-type: none;\\n  margin-left: var(--fa-li-margin, 2.5em);\\n  padding-left: 0; }\\n  .fa-ul > li {\\n    position: relative; }\\n\\n.fa-li {\\n  left: calc(var(--fa-li-width, 2em) * -1);\\n  position: absolute;\\n  text-align: center;\\n  width: var(--fa-li-width, 2em);\\n  line-height: inherit; }\\n\\n.fa-border {\\n  border-color: var(--fa-border-color, #eee);\\n  border-radius: var(--fa-border-radius, 0.1em);\\n  border-style: var(--fa-border-style, solid);\\n  border-width: var(--fa-border-width, 0.08em);\\n  padding: var(--fa-border-padding, 0.2em 0.25em 0.15em); }\\n\\n.fa-pull-left {\\n  float: left;\\n  margin-right: var(--fa-pull-margin, 0.3em); }\\n\\n.fa-pull-right {\\n  float: right;\\n  margin-left: var(--fa-pull-margin, 0.3em); }\\n\\n.fa-beat {\\n  -webkit-animation-name: fa-beat;\\n          animation-name: fa-beat;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, ease-in-out);\\n          animation-timing-function: var(--fa-animation-timing, ease-in-out); }\\n\\n.fa-bounce {\\n  -webkit-animation-name: fa-bounce;\\n          animation-name: fa-bounce;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.28, 0.84, 0.42, 1));\\n          animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.28, 0.84, 0.42, 1)); }\\n\\n.fa-fade {\\n  -webkit-animation-name: fa-fade;\\n          animation-name: fa-fade;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.4, 0, 0.6, 1));\\n          animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.4, 0, 0.6, 1)); }\\n\\n.fa-beat-fade {\\n  -webkit-animation-name: fa-beat-fade;\\n          animation-name: fa-beat-fade;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.4, 0, 0.6, 1));\\n          animation-timing-function: var(--fa-animation-timing, cubic-bezier(0.4, 0, 0.6, 1)); }\\n\\n.fa-flip {\\n  -webkit-animation-name: fa-flip;\\n          animation-name: fa-flip;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, ease-in-out);\\n          animation-timing-function: var(--fa-animation-timing, ease-in-out); }\\n\\n.fa-shake {\\n  -webkit-animation-name: fa-shake;\\n          animation-name: fa-shake;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, linear);\\n          animation-timing-function: var(--fa-animation-timing, linear); }\\n\\n.fa-spin {\\n  -webkit-animation-name: fa-spin;\\n          animation-name: fa-spin;\\n  -webkit-animation-delay: var(--fa-animation-delay, 0s);\\n          animation-delay: var(--fa-animation-delay, 0s);\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 2s);\\n          animation-duration: var(--fa-animation-duration, 2s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, linear);\\n          animation-timing-function: var(--fa-animation-timing, linear); }\\n\\n.fa-spin-reverse {\\n  --fa-animation-direction: reverse; }\\n\\n.fa-pulse,\\n.fa-spin-pulse {\\n  -webkit-animation-name: fa-spin;\\n          animation-name: fa-spin;\\n  -webkit-animation-direction: var(--fa-animation-direction, normal);\\n          animation-direction: var(--fa-animation-direction, normal);\\n  -webkit-animation-duration: var(--fa-animation-duration, 1s);\\n          animation-duration: var(--fa-animation-duration, 1s);\\n  -webkit-animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n          animation-iteration-count: var(--fa-animation-iteration-count, infinite);\\n  -webkit-animation-timing-function: var(--fa-animation-timing, steps(8));\\n          animation-timing-function: var(--fa-animation-timing, steps(8)); }\\n\\n@media (prefers-reduced-motion: reduce) {\\n  .fa-beat,\\n  .fa-bounce,\\n  .fa-fade,\\n  .fa-beat-fade,\\n  .fa-flip,\\n  .fa-pulse,\\n  .fa-shake,\\n  .fa-spin,\\n  .fa-spin-pulse {\\n    -webkit-animation-delay: -1ms;\\n            animation-delay: -1ms;\\n    -webkit-animation-duration: 1ms;\\n            animation-duration: 1ms;\\n    -webkit-animation-iteration-count: 1;\\n            animation-iteration-count: 1;\\n    transition-delay: 0s;\\n    transition-duration: 0s; } }\\n\\n@-webkit-keyframes fa-beat {\\n  0%, 90% {\\n    -webkit-transform: scale(1);\\n            transform: scale(1); }\\n  45% {\\n    -webkit-transform: scale(var(--fa-beat-scale, 1.25));\\n            transform: scale(var(--fa-beat-scale, 1.25)); } }\\n\\n@keyframes fa-beat {\\n  0%, 90% {\\n    -webkit-transform: scale(1);\\n            transform: scale(1); }\\n  45% {\\n    -webkit-transform: scale(var(--fa-beat-scale, 1.25));\\n            transform: scale(var(--fa-beat-scale, 1.25)); } }\\n\\n@-webkit-keyframes fa-bounce {\\n  0% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); }\\n  10% {\\n    -webkit-transform: scale(var(--fa-bounce-start-scale-x, 1.1), var(--fa-bounce-start-scale-y, 0.9)) translateY(0);\\n            transform: scale(var(--fa-bounce-start-scale-x, 1.1), var(--fa-bounce-start-scale-y, 0.9)) translateY(0); }\\n  30% {\\n    -webkit-transform: scale(var(--fa-bounce-jump-scale-x, 0.9), var(--fa-bounce-jump-scale-y, 1.1)) translateY(var(--fa-bounce-height, -0.5em));\\n            transform: scale(var(--fa-bounce-jump-scale-x, 0.9), var(--fa-bounce-jump-scale-y, 1.1)) translateY(var(--fa-bounce-height, -0.5em)); }\\n  50% {\\n    -webkit-transform: scale(var(--fa-bounce-land-scale-x, 1.05), var(--fa-bounce-land-scale-y, 0.95)) translateY(0);\\n            transform: scale(var(--fa-bounce-land-scale-x, 1.05), var(--fa-bounce-land-scale-y, 0.95)) translateY(0); }\\n  57% {\\n    -webkit-transform: scale(1, 1) translateY(var(--fa-bounce-rebound, -0.125em));\\n            transform: scale(1, 1) translateY(var(--fa-bounce-rebound, -0.125em)); }\\n  64% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); }\\n  100% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); } }\\n\\n@keyframes fa-bounce {\\n  0% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); }\\n  10% {\\n    -webkit-transform: scale(var(--fa-bounce-start-scale-x, 1.1), var(--fa-bounce-start-scale-y, 0.9)) translateY(0);\\n            transform: scale(var(--fa-bounce-start-scale-x, 1.1), var(--fa-bounce-start-scale-y, 0.9)) translateY(0); }\\n  30% {\\n    -webkit-transform: scale(var(--fa-bounce-jump-scale-x, 0.9), var(--fa-bounce-jump-scale-y, 1.1)) translateY(var(--fa-bounce-height, -0.5em));\\n            transform: scale(var(--fa-bounce-jump-scale-x, 0.9), var(--fa-bounce-jump-scale-y, 1.1)) translateY(var(--fa-bounce-height, -0.5em)); }\\n  50% {\\n    -webkit-transform: scale(var(--fa-bounce-land-scale-x, 1.05), var(--fa-bounce-land-scale-y, 0.95)) translateY(0);\\n            transform: scale(var(--fa-bounce-land-scale-x, 1.05), var(--fa-bounce-land-scale-y, 0.95)) translateY(0); }\\n  57% {\\n    -webkit-transform: scale(1, 1) translateY(var(--fa-bounce-rebound, -0.125em));\\n            transform: scale(1, 1) translateY(var(--fa-bounce-rebound, -0.125em)); }\\n  64% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); }\\n  100% {\\n    -webkit-transform: scale(1, 1) translateY(0);\\n            transform: scale(1, 1) translateY(0); } }\\n\\n@-webkit-keyframes fa-fade {\\n  50% {\\n    opacity: var(--fa-fade-opacity, 0.4); } }\\n\\n@keyframes fa-fade {\\n  50% {\\n    opacity: var(--fa-fade-opacity, 0.4); } }\\n\\n@-webkit-keyframes fa-beat-fade {\\n  0%, 100% {\\n    opacity: var(--fa-beat-fade-opacity, 0.4);\\n    -webkit-transform: scale(1);\\n            transform: scale(1); }\\n  50% {\\n    opacity: 1;\\n    -webkit-transform: scale(var(--fa-beat-fade-scale, 1.125));\\n            transform: scale(var(--fa-beat-fade-scale, 1.125)); } }\\n\\n@keyframes fa-beat-fade {\\n  0%, 100% {\\n    opacity: var(--fa-beat-fade-opacity, 0.4);\\n    -webkit-transform: scale(1);\\n            transform: scale(1); }\\n  50% {\\n    opacity: 1;\\n    -webkit-transform: scale(var(--fa-beat-fade-scale, 1.125));\\n            transform: scale(var(--fa-beat-fade-scale, 1.125)); } }\\n\\n@-webkit-keyframes fa-flip {\\n  50% {\\n    -webkit-transform: rotate3d(var(--fa-flip-x, 0), var(--fa-flip-y, 1), var(--fa-flip-z, 0), var(--fa-flip-angle, -180deg));\\n            transform: rotate3d(var(--fa-flip-x, 0), var(--fa-flip-y, 1), var(--fa-flip-z, 0), var(--fa-flip-angle, -180deg)); } }\\n\\n@keyframes fa-flip {\\n  50% {\\n    -webkit-transform: rotate3d(var(--fa-flip-x, 0), var(--fa-flip-y, 1), var(--fa-flip-z, 0), var(--fa-flip-angle, -180deg));\\n            transform: rotate3d(var(--fa-flip-x, 0), var(--fa-flip-y, 1), var(--fa-flip-z, 0), var(--fa-flip-angle, -180deg)); } }\\n\\n@-webkit-keyframes fa-shake {\\n  0% {\\n    -webkit-transform: rotate(-15deg);\\n            transform: rotate(-15deg); }\\n  4% {\\n    -webkit-transform: rotate(15deg);\\n            transform: rotate(15deg); }\\n  8%, 24% {\\n    -webkit-transform: rotate(-18deg);\\n            transform: rotate(-18deg); }\\n  12%, 28% {\\n    -webkit-transform: rotate(18deg);\\n            transform: rotate(18deg); }\\n  16% {\\n    -webkit-transform: rotate(-22deg);\\n            transform: rotate(-22deg); }\\n  20% {\\n    -webkit-transform: rotate(22deg);\\n            transform: rotate(22deg); }\\n  32% {\\n    -webkit-transform: rotate(-12deg);\\n            transform: rotate(-12deg); }\\n  36% {\\n    -webkit-transform: rotate(12deg);\\n            transform: rotate(12deg); }\\n  40%, 100% {\\n    -webkit-transform: rotate(0deg);\\n            transform: rotate(0deg); } }\\n\\n@keyframes fa-shake {\\n  0% {\\n    -webkit-transform: rotate(-15deg);\\n            transform: rotate(-15deg); }\\n  4% {\\n    -webkit-transform: rotate(15deg);\\n            transform: rotate(15deg); }\\n  8%, 24% {\\n    -webkit-transform: rotate(-18deg);\\n            transform: rotate(-18deg); }\\n  12%, 28% {\\n    -webkit-transform: rotate(18deg);\\n            transform: rotate(18deg); }\\n  16% {\\n    -webkit-transform: rotate(-22deg);\\n            transform: rotate(-22deg); }\\n  20% {\\n    -webkit-transform: rotate(22deg);\\n            transform: rotate(22deg); }\\n  32% {\\n    -webkit-transform: rotate(-12deg);\\n            transform: rotate(-12deg); }\\n  36% {\\n    -webkit-transform: rotate(12deg);\\n            transform: rotate(12deg); }\\n  40%, 100% {\\n    -webkit-transform: rotate(0deg);\\n            transform: rotate(0deg); } }\\n\\n@-webkit-keyframes fa-spin {\\n  0% {\\n    -webkit-transform: rotate(0deg);\\n            transform: rotate(0deg); }\\n  100% {\\n    -webkit-transform: rotate(360deg);\\n            transform: rotate(360deg); } }\\n\\n@keyframes fa-spin {\\n  0% {\\n    -webkit-transform: rotate(0deg);\\n            transform: rotate(0deg); }\\n  100% {\\n    -webkit-transform: rotate(360deg);\\n            transform: rotate(360deg); } }\\n\\n.fa-rotate-90 {\\n  -webkit-transform: rotate(90deg);\\n          transform: rotate(90deg); }\\n\\n.fa-rotate-180 {\\n  -webkit-transform: rotate(180deg);\\n          transform: rotate(180deg); }\\n\\n.fa-rotate-270 {\\n  -webkit-transform: rotate(270deg);\\n          transform: rotate(270deg); }\\n\\n.fa-flip-horizontal {\\n  -webkit-transform: scale(-1, 1);\\n          transform: scale(-1, 1); }\\n\\n.fa-flip-vertical {\\n  -webkit-transform: scale(1, -1);\\n          transform: scale(1, -1); }\\n\\n.fa-flip-both,\\n.fa-flip-horizontal.fa-flip-vertical {\\n  -webkit-transform: scale(-1, -1);\\n          transform: scale(-1, -1); }\\n\\n.fa-rotate-by {\\n  -webkit-transform: rotate(var(--fa-rotate-angle, none));\\n          transform: rotate(var(--fa-rotate-angle, none)); }\\n\\n.fa-stack {\\n  display: inline-block;\\n  height: 2em;\\n  line-height: 2em;\\n  position: relative;\\n  vertical-align: middle;\\n  width: 2.5em; }\\n\\n.fa-stack-1x,\\n.fa-stack-2x {\\n  left: 0;\\n  position: absolute;\\n  text-align: center;\\n  width: 100%;\\n  z-index: var(--fa-stack-z-index, auto); }\\n\\n.fa-stack-1x {\\n  line-height: inherit; }\\n\\n.fa-stack-2x {\\n  font-size: 2em; }\\n\\n.fa-inverse {\\n  color: var(--fa-inverse, #fff); }\\n\\n/* Font Awesome uses the Unicode Private Use Area (PUA) to ensure screen\\nreaders do not read off random characters that represent icons */\\n.fa-0::before {\\n  content: \\\"\\\\30\\\"; }\\n\\n.fa-1::before {\\n  content: \\\"\\\\31\\\"; }\\n\\n.fa-2::before {\\n  content: \\\"\\\\32\\\"; }\\n\\n.fa-3::before {\\n  content: \\\"\\\\33\\\"; }\\n\\n.fa-4::before {\\n  content: \\\"\\\\34\\\"; }\\n\\n.fa-5::before {\\n  content: \\\"\\\\35\\\"; }\\n\\n.fa-6::before {\\n  content: \\\"\\\\36\\\"; }\\n\\n.fa-7::before {\\n  content: \\\"\\\\37\\\"; }\\n\\n.fa-8::before {\\n  content: \\\"\\\\38\\\"; }\\n\\n.fa-9::before {\\n  content: \\\"\\\\39\\\"; }\\n\\n.fa-fill-drip::before {\\n  content: \\\"\\\\f576\\\"; }\\n\\n.fa-arrows-to-circle::before {\\n  content: \\\"\\\\e4bd\\\"; }\\n\\n.fa-circle-chevron-right::before {\\n  content: \\\"\\\\f138\\\"; }\\n\\n.fa-chevron-circle-right::before {\\n  content: \\\"\\\\f138\\\"; }\\n\\n.fa-at::before {\\n  content: \\\"\\\\40\\\"; }\\n\\n.fa-trash-can::before {\\n  content: \\\"\\\\f2ed\\\"; }\\n\\n.fa-trash-alt::before {\\n  content: \\\"\\\\f2ed\\\"; }\\n\\n.fa-text-height::before {\\n  content: \\\"\\\\f034\\\"; }\\n\\n.fa-user-xmark::before {\\n  content: \\\"\\\\f235\\\"; }\\n\\n.fa-user-times::before {\\n  content: \\\"\\\\f235\\\"; }\\n\\n.fa-stethoscope::before {\\n  content: \\\"\\\\f0f1\\\"; }\\n\\n.fa-message::before {\\n  content: \\\"\\\\f27a\\\"; }\\n\\n.fa-comment-alt::before {\\n  content: \\\"\\\\f27a\\\"; }\\n\\n.fa-info::before {\\n  content: \\\"\\\\f129\\\"; }\\n\\n.fa-down-left-and-up-right-to-center::before {\\n  content: \\\"\\\\f422\\\"; }\\n\\n.fa-compress-alt::before {\\n  content: \\\"\\\\f422\\\"; }\\n\\n.fa-explosion::before {\\n  content: \\\"\\\\e4e9\\\"; }\\n\\n.fa-file-lines::before {\\n  content: \\\"\\\\f15c\\\"; }\\n\\n.fa-file-alt::before {\\n  content: \\\"\\\\f15c\\\"; }\\n\\n.fa-file-text::before {\\n  content: \\\"\\\\f15c\\\"; }\\n\\n.fa-wave-square::before {\\n  content: \\\"\\\\f83e\\\"; }\\n\\n.fa-ring::before {\\n  content: \\\"\\\\f70b\\\"; }\\n\\n.fa-building-un::before {\\n  content: \\\"\\\\e4d9\\\"; }\\n\\n.fa-dice-three::before {\\n  content: \\\"\\\\f527\\\"; }\\n\\n.fa-calendar-days::before {\\n  content: \\\"\\\\f073\\\"; }\\n\\n.fa-calendar-alt::before {\\n  content: \\\"\\\\f073\\\"; }\\n\\n.fa-anchor-circle-check::before {\\n  content: \\\"\\\\e4aa\\\"; }\\n\\n.fa-building-circle-arrow-right::before {\\n  content: \\\"\\\\e4d1\\\"; }\\n\\n.fa-volleyball::before {\\n  content: \\\"\\\\f45f\\\"; }\\n\\n.fa-volleyball-ball::before {\\n  content: \\\"\\\\f45f\\\"; }\\n\\n.fa-arrows-up-to-line::before {\\n  content: \\\"\\\\e4c2\\\"; }\\n\\n.fa-sort-down::before {\\n  content: \\\"\\\\f0dd\\\"; }\\n\\n.fa-sort-desc::before {\\n  content: \\\"\\\\f0dd\\\"; }\\n\\n.fa-circle-minus::before {\\n  content: \\\"\\\\f056\\\"; }\\n\\n.fa-minus-circle::before {\\n  content: \\\"\\\\f056\\\"; }\\n\\n.fa-door-open::before {\\n  content: \\\"\\\\f52b\\\"; }\\n\\n.fa-right-from-bracket::before {\\n  content: \\\"\\\\f2f5\\\"; }\\n\\n.fa-sign-out-alt::before {\\n  content: \\\"\\\\f2f5\\\"; }\\n\\n.fa-atom::before {\\n  content: \\\"\\\\f5d2\\\"; }\\n\\n.fa-soap::before {\\n  content: \\\"\\\\e06e\\\"; }\\n\\n.fa-icons::before {\\n  content: \\\"\\\\f86d\\\"; }\\n\\n.fa-heart-music-camera-bolt::before {\\n  content: \\\"\\\\f86d\\\"; }\\n\\n.fa-microphone-lines-slash::before {\\n  content: \\\"\\\\f539\\\"; }\\n\\n.fa-microphone-alt-slash::before {\\n  content: \\\"\\\\f539\\\"; }\\n\\n.fa-bridge-circle-check::before {\\n  content: \\\"\\\\e4c9\\\"; }\\n\\n.fa-pump-medical::before {\\n  content: \\\"\\\\e06a\\\"; }\\n\\n.fa-fingerprint::before {\\n  content: \\\"\\\\f577\\\"; }\\n\\n.fa-hand-point-right::before {\\n  content: \\\"\\\\f0a4\\\"; }\\n\\n.fa-magnifying-glass-location::before {\\n  content: \\\"\\\\f689\\\"; }\\n\\n.fa-search-location::before {\\n  content: \\\"\\\\f689\\\"; }\\n\\n.fa-forward-step::before {\\n  content: \\\"\\\\f051\\\"; }\\n\\n.fa-step-forward::before {\\n  content: \\\"\\\\f051\\\"; }\\n\\n.fa-face-smile-beam::before {\\n  content: \\\"\\\\f5b8\\\"; }\\n\\n.fa-smile-beam::before {\\n  content: \\\"\\\\f5b8\\\"; }\\n\\n.fa-flag-checkered::before {\\n  content: \\\"\\\\f11e\\\"; }\\n\\n.fa-football::before {\\n  content: \\\"\\\\f44e\\\"; }\\n\\n.fa-football-ball::before {\\n  content: \\\"\\\\f44e\\\"; }\\n\\n.fa-school-circle-exclamation::before {\\n  content: \\\"\\\\e56c\\\"; }\\n\\n.fa-crop::before {\\n  content: \\\"\\\\f125\\\"; }\\n\\n.fa-angles-down::before {\\n  content: \\\"\\\\f103\\\"; }\\n\\n.fa-angle-double-down::before {\\n  content: \\\"\\\\f103\\\"; }\\n\\n.fa-users-rectangle::before {\\n  content: \\\"\\\\e594\\\"; }\\n\\n.fa-people-roof::before {\\n  content: \\\"\\\\e537\\\"; }\\n\\n.fa-people-line::before {\\n  content: \\\"\\\\e534\\\"; }\\n\\n.fa-beer-mug-empty::before {\\n  content: \\\"\\\\f0fc\\\"; }\\n\\n.fa-beer::before {\\n  content: \\\"\\\\f0fc\\\"; }\\n\\n.fa-diagram-predecessor::before {\\n  content: \\\"\\\\e477\\\"; }\\n\\n.fa-arrow-up-long::before {\\n  content: \\\"\\\\f176\\\"; }\\n\\n.fa-long-arrow-up::before {\\n  content: \\\"\\\\f176\\\"; }\\n\\n.fa-fire-flame-simple::before {\\n  content: \\\"\\\\f46a\\\"; }\\n\\n.fa-burn::before {\\n  content: \\\"\\\\f46a\\\"; }\\n\\n.fa-person::before {\\n  content: \\\"\\\\f183\\\"; }\\n\\n.fa-male::before {\\n  content: \\\"\\\\f183\\\"; }\\n\\n.fa-laptop::before {\\n  content: \\\"\\\\f109\\\"; }\\n\\n.fa-file-csv::before {\\n  content: \\\"\\\\f6dd\\\"; }\\n\\n.fa-menorah::before {\\n  content: \\\"\\\\f676\\\"; }\\n\\n.fa-truck-plane::before {\\n  content: \\\"\\\\e58f\\\"; }\\n\\n.fa-record-vinyl::before {\\n  content: \\\"\\\\f8d9\\\"; }\\n\\n.fa-face-grin-stars::before {\\n  content: \\\"\\\\f587\\\"; }\\n\\n.fa-grin-stars::before {\\n  content: \\\"\\\\f587\\\"; }\\n\\n.fa-bong::before {\\n  content: \\\"\\\\f55c\\\"; }\\n\\n.fa-spaghetti-monster-flying::before {\\n  content: \\\"\\\\f67b\\\"; }\\n\\n.fa-pastafarianism::before {\\n  content: \\\"\\\\f67b\\\"; }\\n\\n.fa-arrow-down-up-across-line::before {\\n  content: \\\"\\\\e4af\\\"; }\\n\\n.fa-spoon::before {\\n  content: \\\"\\\\f2e5\\\"; }\\n\\n.fa-utensil-spoon::before {\\n  content: \\\"\\\\f2e5\\\"; }\\n\\n.fa-jar-wheat::before {\\n  content: \\\"\\\\e517\\\"; }\\n\\n.fa-envelopes-bulk::before {\\n  content: \\\"\\\\f674\\\"; }\\n\\n.fa-mail-bulk::before {\\n  content: \\\"\\\\f674\\\"; }\\n\\n.fa-file-circle-exclamation::before {\\n  content: \\\"\\\\e4eb\\\"; }\\n\\n.fa-circle-h::before {\\n  content: \\\"\\\\f47e\\\"; }\\n\\n.fa-hospital-symbol::before {\\n  content: \\\"\\\\f47e\\\"; }\\n\\n.fa-pager::before {\\n  content: \\\"\\\\f815\\\"; }\\n\\n.fa-address-book::before {\\n  content: \\\"\\\\f2b9\\\"; }\\n\\n.fa-contact-book::before {\\n  content: \\\"\\\\f2b9\\\"; }\\n\\n.fa-strikethrough::before {\\n  content: \\\"\\\\f0cc\\\"; }\\n\\n.fa-k::before {\\n  content: \\\"\\\\4b\\\"; }\\n\\n.fa-landmark-flag::before {\\n  content: \\\"\\\\e51c\\\"; }\\n\\n.fa-pencil::before {\\n  content: \\\"\\\\f303\\\"; }\\n\\n.fa-pencil-alt::before {\\n  content: \\\"\\\\f303\\\"; }\\n\\n.fa-backward::before {\\n  content: \\\"\\\\f04a\\\"; }\\n\\n.fa-caret-right::before {\\n  content: \\\"\\\\f0da\\\"; }\\n\\n.fa-comments::before {\\n  content: \\\"\\\\f086\\\"; }\\n\\n.fa-paste::before {\\n  content: \\\"\\\\f0ea\\\"; }\\n\\n.fa-file-clipboard::before {\\n  content: \\\"\\\\f0ea\\\"; }\\n\\n.fa-code-pull-request::before {\\n  content: \\\"\\\\e13c\\\"; }\\n\\n.fa-clipboard-list::before {\\n  content: \\\"\\\\f46d\\\"; }\\n\\n.fa-truck-ramp-box::before {\\n  content: \\\"\\\\f4de\\\"; }\\n\\n.fa-truck-loading::before {\\n  content: \\\"\\\\f4de\\\"; }\\n\\n.fa-user-check::before {\\n  content: \\\"\\\\f4fc\\\"; }\\n\\n.fa-vial-virus::before {\\n  content: \\\"\\\\e597\\\"; }\\n\\n.fa-sheet-plastic::before {\\n  content: \\\"\\\\e571\\\"; }\\n\\n.fa-blog::before {\\n  content: \\\"\\\\f781\\\"; }\\n\\n.fa-user-ninja::before {\\n  content: \\\"\\\\f504\\\"; }\\n\\n.fa-person-arrow-up-from-line::before {\\n  content: \\\"\\\\e539\\\"; }\\n\\n.fa-scroll-torah::before {\\n  content: \\\"\\\\f6a0\\\"; }\\n\\n.fa-torah::before {\\n  content: \\\"\\\\f6a0\\\"; }\\n\\n.fa-broom-ball::before {\\n  content: \\\"\\\\f458\\\"; }\\n\\n.fa-quidditch::before {\\n  content: \\\"\\\\f458\\\"; }\\n\\n.fa-quidditch-broom-ball::before {\\n  content: \\\"\\\\f458\\\"; }\\n\\n.fa-toggle-off::before {\\n  content: \\\"\\\\f204\\\"; }\\n\\n.fa-box-archive::before {\\n  content: \\\"\\\\f187\\\"; }\\n\\n.fa-archive::before {\\n  content: \\\"\\\\f187\\\"; }\\n\\n.fa-person-drowning::before {\\n  content: \\\"\\\\e545\\\"; }\\n\\n.fa-arrow-down-9-1::before {\\n  content: \\\"\\\\f886\\\"; }\\n\\n.fa-sort-numeric-desc::before {\\n  content: \\\"\\\\f886\\\"; }\\n\\n.fa-sort-numeric-down-alt::before {\\n  content: \\\"\\\\f886\\\"; }\\n\\n.fa-face-grin-tongue-squint::before {\\n  content: \\\"\\\\f58a\\\"; }\\n\\n.fa-grin-tongue-squint::before {\\n  content: \\\"\\\\f58a\\\"; }\\n\\n.fa-spray-can::before {\\n  content: \\\"\\\\f5bd\\\"; }\\n\\n.fa-truck-monster::before {\\n  content: \\\"\\\\f63b\\\"; }\\n\\n.fa-w::before {\\n  content: \\\"\\\\57\\\"; }\\n\\n.fa-earth-africa::before {\\n  content: \\\"\\\\f57c\\\"; }\\n\\n.fa-globe-africa::before {\\n  content: \\\"\\\\f57c\\\"; }\\n\\n.fa-rainbow::before {\\n  content: \\\"\\\\f75b\\\"; }\\n\\n.fa-circle-notch::before {\\n  content: \\\"\\\\f1ce\\\"; }\\n\\n.fa-tablet-screen-button::before {\\n  content: \\\"\\\\f3fa\\\"; }\\n\\n.fa-tablet-alt::before {\\n  content: \\\"\\\\f3fa\\\"; }\\n\\n.fa-paw::before {\\n  content: \\\"\\\\f1b0\\\"; }\\n\\n.fa-cloud::before {\\n  content: \\\"\\\\f0c2\\\"; }\\n\\n.fa-trowel-bricks::before {\\n  content: \\\"\\\\e58a\\\"; }\\n\\n.fa-face-flushed::before {\\n  content: \\\"\\\\f579\\\"; }\\n\\n.fa-flushed::before {\\n  content: \\\"\\\\f579\\\"; }\\n\\n.fa-hospital-user::before {\\n  content: \\\"\\\\f80d\\\"; }\\n\\n.fa-tent-arrow-left-right::before {\\n  content: \\\"\\\\e57f\\\"; }\\n\\n.fa-gavel::before {\\n  content: \\\"\\\\f0e3\\\"; }\\n\\n.fa-legal::before {\\n  content: \\\"\\\\f0e3\\\"; }\\n\\n.fa-binoculars::before {\\n  content: \\\"\\\\f1e5\\\"; }\\n\\n.fa-microphone-slash::before {\\n  content: \\\"\\\\f131\\\"; }\\n\\n.fa-box-tissue::before {\\n  content: \\\"\\\\e05b\\\"; }\\n\\n.fa-motorcycle::before {\\n  content: \\\"\\\\f21c\\\"; }\\n\\n.fa-bell-concierge::before {\\n  content: \\\"\\\\f562\\\"; }\\n\\n.fa-concierge-bell::before {\\n  content: \\\"\\\\f562\\\"; }\\n\\n.fa-pen-ruler::before {\\n  content: \\\"\\\\f5ae\\\"; }\\n\\n.fa-pencil-ruler::before {\\n  content: \\\"\\\\f5ae\\\"; }\\n\\n.fa-people-arrows::before {\\n  content: \\\"\\\\e068\\\"; }\\n\\n.fa-people-arrows-left-right::before {\\n  content: \\\"\\\\e068\\\"; }\\n\\n.fa-mars-and-venus-burst::before {\\n  content: \\\"\\\\e523\\\"; }\\n\\n.fa-square-caret-right::before {\\n  content: \\\"\\\\f152\\\"; }\\n\\n.fa-caret-square-right::before {\\n  content: \\\"\\\\f152\\\"; }\\n\\n.fa-scissors::before {\\n  content: \\\"\\\\f0c4\\\"; }\\n\\n.fa-cut::before {\\n  content: \\\"\\\\f0c4\\\"; }\\n\\n.fa-sun-plant-wilt::before {\\n  content: \\\"\\\\e57a\\\"; }\\n\\n.fa-toilets-portable::before {\\n  content: \\\"\\\\e584\\\"; }\\n\\n.fa-hockey-puck::before {\\n  content: \\\"\\\\f453\\\"; }\\n\\n.fa-table::before {\\n  content: \\\"\\\\f0ce\\\"; }\\n\\n.fa-magnifying-glass-arrow-right::before {\\n  content: \\\"\\\\e521\\\"; }\\n\\n.fa-tachograph-digital::before {\\n  content: \\\"\\\\f566\\\"; }\\n\\n.fa-digital-tachograph::before {\\n  content: \\\"\\\\f566\\\"; }\\n\\n.fa-users-slash::before {\\n  content: \\\"\\\\e073\\\"; }\\n\\n.fa-clover::before {\\n  content: \\\"\\\\e139\\\"; }\\n\\n.fa-reply::before {\\n  content: \\\"\\\\f3e5\\\"; }\\n\\n.fa-mail-reply::before {\\n  content: \\\"\\\\f3e5\\\"; }\\n\\n.fa-star-and-crescent::before {\\n  content: \\\"\\\\f699\\\"; }\\n\\n.fa-house-fire::before {\\n  content: \\\"\\\\e50c\\\"; }\\n\\n.fa-square-minus::before {\\n  content: \\\"\\\\f146\\\"; }\\n\\n.fa-minus-square::before {\\n  content: \\\"\\\\f146\\\"; }\\n\\n.fa-helicopter::before {\\n  content: \\\"\\\\f533\\\"; }\\n\\n.fa-compass::before {\\n  content: \\\"\\\\f14e\\\"; }\\n\\n.fa-square-caret-down::before {\\n  content: \\\"\\\\f150\\\"; }\\n\\n.fa-caret-square-down::before {\\n  content: \\\"\\\\f150\\\"; }\\n\\n.fa-file-circle-question::before {\\n  content: \\\"\\\\e4ef\\\"; }\\n\\n.fa-laptop-code::before {\\n  content: \\\"\\\\f5fc\\\"; }\\n\\n.fa-swatchbook::before {\\n  content: \\\"\\\\f5c3\\\"; }\\n\\n.fa-prescription-bottle::before {\\n  content: \\\"\\\\f485\\\"; }\\n\\n.fa-bars::before {\\n  content: \\\"\\\\f0c9\\\"; }\\n\\n.fa-navicon::before {\\n  content: \\\"\\\\f0c9\\\"; }\\n\\n.fa-people-group::before {\\n  content: \\\"\\\\e533\\\"; }\\n\\n.fa-hourglass-end::before {\\n  content: \\\"\\\\f253\\\"; }\\n\\n.fa-hourglass-3::before {\\n  content: \\\"\\\\f253\\\"; }\\n\\n.fa-heart-crack::before {\\n  content: \\\"\\\\f7a9\\\"; }\\n\\n.fa-heart-broken::before {\\n  content: \\\"\\\\f7a9\\\"; }\\n\\n.fa-square-up-right::before {\\n  content: \\\"\\\\f360\\\"; }\\n\\n.fa-external-link-square-alt::before {\\n  content: \\\"\\\\f360\\\"; }\\n\\n.fa-face-kiss-beam::before {\\n  content: \\\"\\\\f597\\\"; }\\n\\n.fa-kiss-beam::before {\\n  content: \\\"\\\\f597\\\"; }\\n\\n.fa-film::before {\\n  content: \\\"\\\\f008\\\"; }\\n\\n.fa-ruler-horizontal::before {\\n  content: \\\"\\\\f547\\\"; }\\n\\n.fa-people-robbery::before {\\n  content: \\\"\\\\e536\\\"; }\\n\\n.fa-lightbulb::before {\\n  content: \\\"\\\\f0eb\\\"; }\\n\\n.fa-caret-left::before {\\n  content: \\\"\\\\f0d9\\\"; }\\n\\n.fa-circle-exclamation::before {\\n  content: \\\"\\\\f06a\\\"; }\\n\\n.fa-exclamation-circle::before {\\n  content: \\\"\\\\f06a\\\"; }\\n\\n.fa-school-circle-xmark::before {\\n  content: \\\"\\\\e56d\\\"; }\\n\\n.fa-arrow-right-from-bracket::before {\\n  content: \\\"\\\\f08b\\\"; }\\n\\n.fa-sign-out::before {\\n  content: \\\"\\\\f08b\\\"; }\\n\\n.fa-circle-chevron-down::before {\\n  content: \\\"\\\\f13a\\\"; }\\n\\n.fa-chevron-circle-down::before {\\n  content: \\\"\\\\f13a\\\"; }\\n\\n.fa-unlock-keyhole::before {\\n  content: \\\"\\\\f13e\\\"; }\\n\\n.fa-unlock-alt::before {\\n  content: \\\"\\\\f13e\\\"; }\\n\\n.fa-cloud-showers-heavy::before {\\n  content: \\\"\\\\f740\\\"; }\\n\\n.fa-headphones-simple::before {\\n  content: \\\"\\\\f58f\\\"; }\\n\\n.fa-headphones-alt::before {\\n  content: \\\"\\\\f58f\\\"; }\\n\\n.fa-sitemap::before {\\n  content: \\\"\\\\f0e8\\\"; }\\n\\n.fa-circle-dollar-to-slot::before {\\n  content: \\\"\\\\f4b9\\\"; }\\n\\n.fa-donate::before {\\n  content: \\\"\\\\f4b9\\\"; }\\n\\n.fa-memory::before {\\n  content: \\\"\\\\f538\\\"; }\\n\\n.fa-road-spikes::before {\\n  content: \\\"\\\\e568\\\"; }\\n\\n.fa-fire-burner::before {\\n  content: \\\"\\\\e4f1\\\"; }\\n\\n.fa-flag::before {\\n  content: \\\"\\\\f024\\\"; 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\\\"\\\\f1dc\\\"; }\\n\\n.fa-header::before {\\n  content: \\\"\\\\f1dc\\\"; }\\n\\n.fa-ghost::before {\\n  content: \\\"\\\\f6e2\\\"; }\\n\\n.fa-list::before {\\n  content: \\\"\\\\f03a\\\"; }\\n\\n.fa-list-squares::before {\\n  content: \\\"\\\\f03a\\\"; }\\n\\n.fa-square-phone-flip::before {\\n  content: \\\"\\\\f87b\\\"; }\\n\\n.fa-phone-square-alt::before {\\n  content: \\\"\\\\f87b\\\"; }\\n\\n.fa-cart-plus::before {\\n  content: \\\"\\\\f217\\\"; }\\n\\n.fa-gamepad::before {\\n  content: \\\"\\\\f11b\\\"; }\\n\\n.fa-circle-dot::before {\\n  content: \\\"\\\\f192\\\"; }\\n\\n.fa-dot-circle::before {\\n  content: \\\"\\\\f192\\\"; }\\n\\n.fa-face-dizzy::before {\\n  content: \\\"\\\\f567\\\"; }\\n\\n.fa-dizzy::before {\\n  content: \\\"\\\\f567\\\"; }\\n\\n.fa-egg::before {\\n  content: \\\"\\\\f7fb\\\"; }\\n\\n.fa-house-medical-circle-xmark::before {\\n  content: \\\"\\\\e513\\\"; }\\n\\n.fa-campground::before {\\n  content: \\\"\\\\f6bb\\\"; }\\n\\n.fa-folder-plus::before {\\n  content: \\\"\\\\f65e\\\"; }\\n\\n.fa-futbol::before {\\n  content: \\\"\\\\f1e3\\\"; }\\n\\n.fa-futbol-ball::before {\\n  content: \\\"\\\\f1e3\\\"; }\\n\\n.fa-soccer-ball::before {\\n  content: \\\"\\\\f1e3\\\"; }\\n\\n.fa-paintbrush::before {\\n  content: \\\"\\\\f1fc\\\"; }\\n\\n.fa-paint-brush::before {\\n  content: \\\"\\\\f1fc\\\"; }\\n\\n.fa-lock::before {\\n  content: \\\"\\\\f023\\\"; }\\n\\n.fa-gas-pump::before {\\n  content: \\\"\\\\f52f\\\"; }\\n\\n.fa-hot-tub-person::before {\\n  content: \\\"\\\\f593\\\"; }\\n\\n.fa-hot-tub::before {\\n  content: \\\"\\\\f593\\\"; }\\n\\n.fa-map-location::before {\\n  content: \\\"\\\\f59f\\\"; }\\n\\n.fa-map-marked::before {\\n  content: \\\"\\\\f59f\\\"; }\\n\\n.fa-house-flood-water::before {\\n  content: \\\"\\\\e50e\\\"; }\\n\\n.fa-tree::before {\\n  content: \\\"\\\\f1bb\\\"; }\\n\\n.fa-bridge-lock::before {\\n  content: \\\"\\\\e4cc\\\"; }\\n\\n.fa-sack-dollar::before {\\n  content: \\\"\\\\f81d\\\"; 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content: \\\"\\\\f7b5\\\"; }\\n\\n.fa-person-rays::before {\\n  content: \\\"\\\\e54d\\\"; }\\n\\n.fa-users::before {\\n  content: \\\"\\\\f0c0\\\"; }\\n\\n.fa-eye-slash::before {\\n  content: \\\"\\\\f070\\\"; }\\n\\n.fa-flask-vial::before {\\n  content: \\\"\\\\e4f3\\\"; }\\n\\n.fa-hand::before {\\n  content: \\\"\\\\f256\\\"; }\\n\\n.fa-hand-paper::before {\\n  content: \\\"\\\\f256\\\"; }\\n\\n.fa-om::before {\\n  content: \\\"\\\\f679\\\"; }\\n\\n.fa-worm::before {\\n  content: \\\"\\\\e599\\\"; }\\n\\n.fa-house-circle-xmark::before {\\n  content: \\\"\\\\e50b\\\"; }\\n\\n.fa-plug::before {\\n  content: \\\"\\\\f1e6\\\"; }\\n\\n.fa-chevron-up::before {\\n  content: \\\"\\\\f077\\\"; }\\n\\n.fa-hand-spock::before {\\n  content: \\\"\\\\f259\\\"; }\\n\\n.fa-stopwatch::before {\\n  content: \\\"\\\\f2f2\\\"; }\\n\\n.fa-face-kiss::before {\\n  content: \\\"\\\\f596\\\"; }\\n\\n.fa-kiss::before {\\n  content: \\\"\\\\f596\\\"; }\\n\\n.fa-bridge-circle-xmark::before {\\n  content: \\\"\\\\e4cb\\\"; }\\n\\n.fa-face-grin-tongue::before {\\n  content: \\\"\\\\f589\\\"; }\\n\\n.fa-grin-tongue::before {\\n  content: \\\"\\\\f589\\\"; }\\n\\n.fa-chess-bishop::before {\\n  content: \\\"\\\\f43a\\\"; }\\n\\n.fa-face-grin-wink::before {\\n  content: \\\"\\\\f58c\\\"; }\\n\\n.fa-grin-wink::before {\\n  content: \\\"\\\\f58c\\\"; }\\n\\n.fa-ear-deaf::before {\\n  content: \\\"\\\\f2a4\\\"; }\\n\\n.fa-deaf::before {\\n  content: \\\"\\\\f2a4\\\"; }\\n\\n.fa-deafness::before {\\n  content: \\\"\\\\f2a4\\\"; }\\n\\n.fa-hard-of-hearing::before {\\n  content: \\\"\\\\f2a4\\\"; }\\n\\n.fa-road-circle-check::before {\\n  content: \\\"\\\\e564\\\"; }\\n\\n.fa-dice-five::before {\\n  content: \\\"\\\\f523\\\"; }\\n\\n.fa-square-rss::before {\\n  content: \\\"\\\\f143\\\"; }\\n\\n.fa-rss-square::before {\\n  content: \\\"\\\\f143\\\"; }\\n\\n.fa-land-mine-on::before {\\n  content: \\\"\\\\e51b\\\"; }\\n\\n.fa-i-cursor::before {\\n  content: \\\"\\\\f246\\\"; }\\n\\n.fa-stamp::before {\\n  content: \\\"\\\\f5bf\\\"; }\\n\\n.fa-stairs::before {\\n  content: \\\"\\\\e289\\\"; }\\n\\n.fa-i::before {\\n  content: \\\"\\\\49\\\"; }\\n\\n.fa-hryvnia-sign::before {\\n  content: \\\"\\\\f6f2\\\"; }\\n\\n.fa-hryvnia::before {\\n  content: \\\"\\\\f6f2\\\"; }\\n\\n.fa-pills::before {\\n  content: \\\"\\\\f484\\\"; }\\n\\n.fa-face-grin-wide::before {\\n  content: \\\"\\\\f581\\\"; }\\n\\n.fa-grin-alt::before {\\n  content: \\\"\\\\f581\\\"; }\\n\\n.fa-tooth::before {\\n  content: \\\"\\\\f5c9\\\"; }\\n\\n.fa-v::before {\\n  content: \\\"\\\\56\\\"; }\\n\\n.fa-bicycle::before {\\n  content: \\\"\\\\f206\\\"; }\\n\\n.fa-staff-snake::before {\\n  content: \\\"\\\\e579\\\"; }\\n\\n.fa-rod-asclepius::before {\\n  content: \\\"\\\\e579\\\"; }\\n\\n.fa-rod-snake::before {\\n  content: \\\"\\\\e579\\\"; }\\n\\n.fa-staff-aesculapius::before {\\n  content: \\\"\\\\e579\\\"; }\\n\\n.fa-head-side-cough-slash::before {\\n  content: \\\"\\\\e062\\\"; }\\n\\n.fa-truck-medical::before {\\n  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\\\"\\\\f0fa\\\"; }\\n\\n.fa-user-secret::before {\\n  content: \\\"\\\\f21b\\\"; }\\n\\n.fa-otter::before {\\n  content: \\\"\\\\f700\\\"; }\\n\\n.fa-person-dress::before {\\n  content: \\\"\\\\f182\\\"; }\\n\\n.fa-female::before {\\n  content: \\\"\\\\f182\\\"; }\\n\\n.fa-comment-dollar::before {\\n  content: \\\"\\\\f651\\\"; }\\n\\n.fa-business-time::before {\\n  content: \\\"\\\\f64a\\\"; }\\n\\n.fa-briefcase-clock::before {\\n  content: \\\"\\\\f64a\\\"; }\\n\\n.fa-table-cells-large::before {\\n  content: \\\"\\\\f009\\\"; }\\n\\n.fa-th-large::before {\\n  content: \\\"\\\\f009\\\"; }\\n\\n.fa-book-tanakh::before {\\n  content: \\\"\\\\f827\\\"; }\\n\\n.fa-tanakh::before {\\n  content: \\\"\\\\f827\\\"; }\\n\\n.fa-phone-volume::before {\\n  content: \\\"\\\\f2a0\\\"; }\\n\\n.fa-volume-control-phone::before {\\n  content: \\\"\\\\f2a0\\\"; }\\n\\n.fa-hat-cowboy-side::before {\\n  content: \\\"\\\\f8c1\\\"; }\\n\\n.fa-clipboard-user::before {\\n  content: \\\"\\\\f7f3\\\"; 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\\\"\\\\f486\\\"; }\\n\\n.fa-prescription-bottle-alt::before {\\n  content: \\\"\\\\f486\\\"; }\\n\\n.fa-landmark::before {\\n  content: \\\"\\\\f66f\\\"; }\\n\\n.fa-truck::before {\\n  content: \\\"\\\\f0d1\\\"; }\\n\\n.fa-crosshairs::before {\\n  content: \\\"\\\\f05b\\\"; }\\n\\n.fa-person-cane::before {\\n  content: \\\"\\\\e53c\\\"; }\\n\\n.fa-tent::before {\\n  content: \\\"\\\\e57d\\\"; }\\n\\n.fa-vest-patches::before {\\n  content: \\\"\\\\e086\\\"; }\\n\\n.fa-check-double::before {\\n  content: \\\"\\\\f560\\\"; }\\n\\n.fa-arrow-down-a-z::before {\\n  content: \\\"\\\\f15d\\\"; }\\n\\n.fa-sort-alpha-asc::before {\\n  content: \\\"\\\\f15d\\\"; }\\n\\n.fa-sort-alpha-down::before {\\n  content: \\\"\\\\f15d\\\"; }\\n\\n.fa-money-bill-wheat::before {\\n  content: \\\"\\\\e52a\\\"; }\\n\\n.fa-cookie::before {\\n  content: \\\"\\\\f563\\\"; }\\n\\n.fa-arrow-rotate-left::before {\\n  content: \\\"\\\\f0e2\\\"; }\\n\\n.fa-arrow-left-rotate::before {\\n  content: \\\"\\\\f0e2\\\"; 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\\\"\\\\f469\\\"; }\\n\\n.fa-genderless::before {\\n  content: \\\"\\\\f22d\\\"; }\\n\\n.fa-chevron-right::before {\\n  content: \\\"\\\\f054\\\"; }\\n\\n.fa-retweet::before {\\n  content: \\\"\\\\f079\\\"; }\\n\\n.fa-car-rear::before {\\n  content: \\\"\\\\f5de\\\"; }\\n\\n.fa-car-alt::before {\\n  content: \\\"\\\\f5de\\\"; }\\n\\n.fa-pump-soap::before {\\n  content: \\\"\\\\e06b\\\"; }\\n\\n.fa-video-slash::before {\\n  content: \\\"\\\\f4e2\\\"; }\\n\\n.fa-battery-quarter::before {\\n  content: \\\"\\\\f243\\\"; }\\n\\n.fa-battery-2::before {\\n  content: \\\"\\\\f243\\\"; }\\n\\n.fa-radio::before {\\n  content: \\\"\\\\f8d7\\\"; }\\n\\n.fa-baby-carriage::before {\\n  content: \\\"\\\\f77d\\\"; }\\n\\n.fa-carriage-baby::before {\\n  content: \\\"\\\\f77d\\\"; }\\n\\n.fa-traffic-light::before {\\n  content: \\\"\\\\f637\\\"; }\\n\\n.fa-thermometer::before {\\n  content: \\\"\\\\f491\\\"; }\\n\\n.fa-vr-cardboard::before {\\n  content: \\\"\\\\f729\\\"; 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content: \\\"\\\\f62a\\\"; }\\n\\n.fa-shower::before {\\n  content: \\\"\\\\f2cc\\\"; }\\n\\n.fa-desktop::before {\\n  content: \\\"\\\\f390\\\"; }\\n\\n.fa-desktop-alt::before {\\n  content: \\\"\\\\f390\\\"; }\\n\\n.fa-m::before {\\n  content: \\\"\\\\4d\\\"; }\\n\\n.fa-table-list::before {\\n  content: \\\"\\\\f00b\\\"; }\\n\\n.fa-th-list::before {\\n  content: \\\"\\\\f00b\\\"; }\\n\\n.fa-comment-sms::before {\\n  content: \\\"\\\\f7cd\\\"; }\\n\\n.fa-sms::before {\\n  content: \\\"\\\\f7cd\\\"; }\\n\\n.fa-book::before {\\n  content: \\\"\\\\f02d\\\"; }\\n\\n.fa-user-plus::before {\\n  content: \\\"\\\\f234\\\"; }\\n\\n.fa-check::before {\\n  content: \\\"\\\\f00c\\\"; }\\n\\n.fa-battery-three-quarters::before {\\n  content: \\\"\\\\f241\\\"; }\\n\\n.fa-battery-4::before {\\n  content: \\\"\\\\f241\\\"; }\\n\\n.fa-house-circle-check::before {\\n  content: \\\"\\\\e509\\\"; }\\n\\n.fa-angle-left::before {\\n  content: \\\"\\\\f104\\\"; }\\n\\n.fa-diagram-successor::before {\\n  content: \\\"\\\\e47a\\\"; }\\n\\n.fa-truck-arrow-right::before {\\n  content: \\\"\\\\e58b\\\"; }\\n\\n.fa-arrows-split-up-and-left::before {\\n  content: \\\"\\\\e4bc\\\"; }\\n\\n.fa-hand-fist::before {\\n  content: \\\"\\\\f6de\\\"; }\\n\\n.fa-fist-raised::before {\\n  content: \\\"\\\\f6de\\\"; }\\n\\n.fa-cloud-moon::before {\\n  content: \\\"\\\\f6c3\\\"; }\\n\\n.fa-briefcase::before {\\n  content: \\\"\\\\f0b1\\\"; }\\n\\n.fa-person-falling::before {\\n  content: \\\"\\\\e546\\\"; }\\n\\n.fa-image-portrait::before {\\n  content: \\\"\\\\f3e0\\\"; }\\n\\n.fa-portrait::before {\\n  content: \\\"\\\\f3e0\\\"; }\\n\\n.fa-user-tag::before {\\n  content: \\\"\\\\f507\\\"; }\\n\\n.fa-rug::before {\\n  content: \\\"\\\\e569\\\"; }\\n\\n.fa-earth-europe::before {\\n  content: \\\"\\\\f7a2\\\"; }\\n\\n.fa-globe-europe::before {\\n  content: \\\"\\\\f7a2\\\"; }\\n\\n.fa-cart-flatbed-suitcase::before {\\n  content: \\\"\\\\f59d\\\"; }\\n\\n.fa-luggage-cart::before {\\n  content: \\\"\\\\f59d\\\"; }\\n\\n.fa-rectangle-xmark::before {\\n  content: \\\"\\\\f410\\\"; }\\n\\n.fa-rectangle-times::before {\\n  content: \\\"\\\\f410\\\"; }\\n\\n.fa-times-rectangle::before {\\n  content: \\\"\\\\f410\\\"; }\\n\\n.fa-window-close::before {\\n  content: \\\"\\\\f410\\\"; }\\n\\n.fa-baht-sign::before {\\n  content: \\\"\\\\e0ac\\\"; }\\n\\n.fa-book-open::before {\\n  content: \\\"\\\\f518\\\"; }\\n\\n.fa-book-journal-whills::before {\\n  content: \\\"\\\\f66a\\\"; }\\n\\n.fa-journal-whills::before {\\n  content: \\\"\\\\f66a\\\"; }\\n\\n.fa-handcuffs::before {\\n  content: \\\"\\\\e4f8\\\"; }\\n\\n.fa-triangle-exclamation::before {\\n  content: \\\"\\\\f071\\\"; }\\n\\n.fa-exclamation-triangle::before {\\n  content: \\\"\\\\f071\\\"; }\\n\\n.fa-warning::before {\\n  content: \\\"\\\\f071\\\"; }\\n\\n.fa-database::before {\\n  content: \\\"\\\\f1c0\\\"; }\\n\\n.fa-share::before {\\n  content: \\\"\\\\f064\\\"; }\\n\\n.fa-arrow-turn-right::before {\\n  content: \\\"\\\\f064\\\"; }\\n\\n.fa-mail-forward::before {\\n  content: \\\"\\\\f064\\\"; }\\n\\n.fa-bottle-droplet::before {\\n  content: \\\"\\\\e4c4\\\"; }\\n\\n.fa-mask-face::before {\\n  content: \\\"\\\\e1d7\\\"; }\\n\\n.fa-hill-rockslide::before {\\n  content: \\\"\\\\e508\\\"; }\\n\\n.fa-right-left::before {\\n  content: \\\"\\\\f362\\\"; }\\n\\n.fa-exchange-alt::before {\\n  content: \\\"\\\\f362\\\"; }\\n\\n.fa-paper-plane::before {\\n  content: \\\"\\\\f1d8\\\"; }\\n\\n.fa-road-circle-exclamation::before {\\n  content: \\\"\\\\e565\\\"; }\\n\\n.fa-dungeon::before {\\n  content: \\\"\\\\f6d9\\\"; }\\n\\n.fa-align-right::before {\\n  content: \\\"\\\\f038\\\"; }\\n\\n.fa-money-bill-1-wave::before {\\n  content: \\\"\\\\f53b\\\"; }\\n\\n.fa-money-bill-wave-alt::before {\\n  content: \\\"\\\\f53b\\\"; }\\n\\n.fa-life-ring::before {\\n  content: \\\"\\\\f1cd\\\"; }\\n\\n.fa-hands::before {\\n  content: \\\"\\\\f2a7\\\"; }\\n\\n.fa-sign-language::before {\\n  content: \\\"\\\\f2a7\\\"; }\\n\\n.fa-signing::before {\\n  content: \\\"\\\\f2a7\\\"; }\\n\\n.fa-calendar-day::before {\\n  content: \\\"\\\\f783\\\"; }\\n\\n.fa-water-ladder::before {\\n  content: \\\"\\\\f5c5\\\"; }\\n\\n.fa-ladder-water::before {\\n  content: \\\"\\\\f5c5\\\"; }\\n\\n.fa-swimming-pool::before {\\n  content: \\\"\\\\f5c5\\\"; }\\n\\n.fa-arrows-up-down::before {\\n  content: \\\"\\\\f07d\\\"; }\\n\\n.fa-arrows-v::before {\\n  content: \\\"\\\\f07d\\\"; }\\n\\n.fa-face-grimace::before {\\n  content: \\\"\\\\f57f\\\"; }\\n\\n.fa-grimace::before {\\n  content: \\\"\\\\f57f\\\"; }\\n\\n.fa-wheelchair-move::before {\\n  content: \\\"\\\\e2ce\\\"; }\\n\\n.fa-wheelchair-alt::before {\\n  content: \\\"\\\\e2ce\\\"; }\\n\\n.fa-turn-down::before {\\n  content: \\\"\\\\f3be\\\"; }\\n\\n.fa-level-down-alt::before {\\n  content: \\\"\\\\f3be\\\"; }\\n\\n.fa-person-walking-arrow-right::before {\\n  content: \\\"\\\\e552\\\"; }\\n\\n.fa-square-envelope::before {\\n  content: \\\"\\\\f199\\\"; }\\n\\n.fa-envelope-square::before {\\n  content: \\\"\\\\f199\\\"; }\\n\\n.fa-dice::before {\\n  content: \\\"\\\\f522\\\"; }\\n\\n.fa-bowling-ball::before {\\n  content: \\\"\\\\f436\\\"; }\\n\\n.fa-brain::before {\\n  content: \\\"\\\\f5dc\\\"; }\\n\\n.fa-bandage::before {\\n  content: \\\"\\\\f462\\\"; }\\n\\n.fa-band-aid::before {\\n  content: \\\"\\\\f462\\\"; }\\n\\n.fa-calendar-minus::before {\\n  content: \\\"\\\\f272\\\"; }\\n\\n.fa-circle-xmark::before {\\n  content: \\\"\\\\f057\\\"; }\\n\\n.fa-times-circle::before {\\n  content: \\\"\\\\f057\\\"; }\\n\\n.fa-xmark-circle::before {\\n  content: \\\"\\\\f057\\\"; }\\n\\n.fa-gifts::before {\\n  content: \\\"\\\\f79c\\\"; }\\n\\n.fa-hotel::before {\\n  content: \\\"\\\\f594\\\"; }\\n\\n.fa-earth-asia::before {\\n  content: \\\"\\\\f57e\\\"; }\\n\\n.fa-globe-asia::before {\\n  content: \\\"\\\\f57e\\\"; }\\n\\n.fa-id-card-clip::before {\\n  content: \\\"\\\\f47f\\\"; }\\n\\n.fa-id-card-alt::before {\\n  content: \\\"\\\\f47f\\\"; }\\n\\n.fa-magnifying-glass-plus::before {\\n  content: \\\"\\\\f00e\\\"; }\\n\\n.fa-search-plus::before {\\n  content: \\\"\\\\f00e\\\"; }\\n\\n.fa-thumbs-up::before {\\n  content: \\\"\\\\f164\\\"; }\\n\\n.fa-user-clock::before {\\n  content: \\\"\\\\f4fd\\\"; }\\n\\n.fa-hand-dots::before {\\n  content: \\\"\\\\f461\\\"; }\\n\\n.fa-allergies::before {\\n  content: \\\"\\\\f461\\\"; }\\n\\n.fa-file-invoice::before {\\n  content: \\\"\\\\f570\\\"; }\\n\\n.fa-window-minimize::before {\\n  content: \\\"\\\\f2d1\\\"; }\\n\\n.fa-mug-saucer::before {\\n  content: \\\"\\\\f0f4\\\"; }\\n\\n.fa-coffee::before {\\n  content: \\\"\\\\f0f4\\\"; }\\n\\n.fa-brush::before {\\n  content: \\\"\\\\f55d\\\"; }\\n\\n.fa-mask::before {\\n  content: \\\"\\\\f6fa\\\"; }\\n\\n.fa-magnifying-glass-minus::before {\\n  content: \\\"\\\\f010\\\"; }\\n\\n.fa-search-minus::before {\\n  content: \\\"\\\\f010\\\"; }\\n\\n.fa-ruler-vertical::before {\\n  content: \\\"\\\\f548\\\"; }\\n\\n.fa-user-large::before {\\n  content: \\\"\\\\f406\\\"; }\\n\\n.fa-user-alt::before {\\n  content: \\\"\\\\f406\\\"; }\\n\\n.fa-train-tram::before {\\n  content: \\\"\\\\e5b4\\\"; }\\n\\n.fa-user-nurse::before {\\n  content: \\\"\\\\f82f\\\"; }\\n\\n.fa-syringe::before {\\n  content: \\\"\\\\f48e\\\"; }\\n\\n.fa-cloud-sun::before {\\n  content: \\\"\\\\f6c4\\\"; }\\n\\n.fa-stopwatch-20::before {\\n  content: \\\"\\\\e06f\\\"; }\\n\\n.fa-square-full::before {\\n  content: \\\"\\\\f45c\\\"; }\\n\\n.fa-magnet::before {\\n  content: \\\"\\\\f076\\\"; }\\n\\n.fa-jar::before {\\n  content: \\\"\\\\e516\\\"; }\\n\\n.fa-note-sticky::before {\\n  content: \\\"\\\\f249\\\"; }\\n\\n.fa-sticky-note::before {\\n  content: \\\"\\\\f249\\\"; }\\n\\n.fa-bug-slash::before {\\n  content: \\\"\\\\e490\\\"; }\\n\\n.fa-arrow-up-from-water-pump::before {\\n  content: \\\"\\\\e4b6\\\"; }\\n\\n.fa-bone::before {\\n  content: \\\"\\\\f5d7\\\"; }\\n\\n.fa-user-injured::before {\\n  content: \\\"\\\\f728\\\"; }\\n\\n.fa-face-sad-tear::before {\\n  content: \\\"\\\\f5b4\\\"; }\\n\\n.fa-sad-tear::before {\\n  content: \\\"\\\\f5b4\\\"; }\\n\\n.fa-plane::before {\\n  content: \\\"\\\\f072\\\"; }\\n\\n.fa-tent-arrows-down::before {\\n  content: \\\"\\\\e581\\\"; }\\n\\n.fa-exclamation::before {\\n  content: \\\"\\\\21\\\"; }\\n\\n.fa-arrows-spin::before {\\n  content: \\\"\\\\e4bb\\\"; }\\n\\n.fa-print::before {\\n  content: \\\"\\\\f02f\\\"; }\\n\\n.fa-turkish-lira-sign::before {\\n  content: \\\"\\\\e2bb\\\"; }\\n\\n.fa-try::before {\\n  content: \\\"\\\\e2bb\\\"; }\\n\\n.fa-turkish-lira::before {\\n  content: \\\"\\\\e2bb\\\"; }\\n\\n.fa-dollar-sign::before {\\n  content: \\\"\\\\24\\\"; }\\n\\n.fa-dollar::before {\\n  content: \\\"\\\\24\\\"; }\\n\\n.fa-usd::before {\\n  content: \\\"\\\\24\\\"; }\\n\\n.fa-x::before {\\n  content: \\\"\\\\58\\\"; }\\n\\n.fa-magnifying-glass-dollar::before {\\n  content: \\\"\\\\f688\\\"; }\\n\\n.fa-search-dollar::before {\\n  content: \\\"\\\\f688\\\"; }\\n\\n.fa-users-gear::before {\\n  content: \\\"\\\\f509\\\"; }\\n\\n.fa-users-cog::before {\\n  content: \\\"\\\\f509\\\"; }\\n\\n.fa-person-military-pointing::before {\\n  content: \\\"\\\\e54a\\\"; }\\n\\n.fa-building-columns::before {\\n  content: \\\"\\\\f19c\\\"; }\\n\\n.fa-bank::before {\\n  content: \\\"\\\\f19c\\\"; }\\n\\n.fa-institution::before {\\n  content: \\\"\\\\f19c\\\"; }\\n\\n.fa-museum::before {\\n  content: \\\"\\\\f19c\\\"; }\\n\\n.fa-university::before {\\n  content: \\\"\\\\f19c\\\"; }\\n\\n.fa-umbrella::before {\\n  content: \\\"\\\\f0e9\\\"; }\\n\\n.fa-trowel::before {\\n  content: \\\"\\\\e589\\\"; }\\n\\n.fa-d::before {\\n  content: \\\"\\\\44\\\"; }\\n\\n.fa-stapler::before {\\n  content: \\\"\\\\e5af\\\"; }\\n\\n.fa-masks-theater::before {\\n  content: \\\"\\\\f630\\\"; }\\n\\n.fa-theater-masks::before {\\n  content: \\\"\\\\f630\\\"; }\\n\\n.fa-kip-sign::before {\\n  content: \\\"\\\\e1c4\\\"; }\\n\\n.fa-hand-point-left::before {\\n  content: \\\"\\\\f0a5\\\"; }\\n\\n.fa-handshake-simple::before {\\n  content: \\\"\\\\f4c6\\\"; }\\n\\n.fa-handshake-alt::before {\\n  content: \\\"\\\\f4c6\\\"; }\\n\\n.fa-jet-fighter::before {\\n  content: \\\"\\\\f0fb\\\"; }\\n\\n.fa-fighter-jet::before {\\n  content: \\\"\\\\f0fb\\\"; }\\n\\n.fa-square-share-nodes::before {\\n  content: \\\"\\\\f1e1\\\"; }\\n\\n.fa-share-alt-square::before {\\n  content: \\\"\\\\f1e1\\\"; }\\n\\n.fa-barcode::before {\\n  content: \\\"\\\\f02a\\\"; }\\n\\n.fa-plus-minus::before {\\n  content: \\\"\\\\e43c\\\"; }\\n\\n.fa-video::before {\\n  content: \\\"\\\\f03d\\\"; }\\n\\n.fa-video-camera::before {\\n  content: \\\"\\\\f03d\\\"; }\\n\\n.fa-graduation-cap::before {\\n  content: \\\"\\\\f19d\\\"; }\\n\\n.fa-mortar-board::before {\\n  content: \\\"\\\\f19d\\\"; }\\n\\n.fa-hand-holding-medical::before {\\n  content: \\\"\\\\e05c\\\"; }\\n\\n.fa-person-circle-check::before {\\n  content: \\\"\\\\e53e\\\"; }\\n\\n.fa-turn-up::before {\\n  content: \\\"\\\\f3bf\\\"; }\\n\\n.fa-level-up-alt::before {\\n  content: \\\"\\\\f3bf\\\"; }\\n\\n.sr-only,\\n.fa-sr-only {\\n  position: absolute;\\n  width: 1px;\\n  height: 1px;\\n  padding: 0;\\n  margin: -1px;\\n  overflow: hidden;\\n  clip: rect(0, 0, 0, 0);\\n  white-space: nowrap;\\n  border-width: 0; }\\n\\n.sr-only-focusable:not(:focus),\\n.fa-sr-only-focusable:not(:focus) {\\n  position: absolute;\\n  width: 1px;\\n  height: 1px;\\n  padding: 0;\\n  margin: -1px;\\n  overflow: hidden;\\n  clip: rect(0, 0, 0, 0);\\n  white-space: nowrap;\\n  border-width: 0; }\\n:root, :host {\\n  --fa-style-family-brands: 'Font Awesome 6 Brands';\\n  --fa-font-brands: normal 400 1em/1 'Font Awesome 6 Brands'; }\\n\\n@font-face {\\n  font-family: 'Font Awesome 6 Brands';\\n  font-style: normal;\\n  font-weight: 400;\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_0___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_1___ + \") format(\\\"truetype\\\"); }\\n\\n.fab,\\n.fa-brands {\\n  font-weight: 400; }\\n\\n.fa-monero:before {\\n  content: \\\"\\\\f3d0\\\"; }\\n\\n.fa-hooli:before {\\n  content: \\\"\\\\f427\\\"; }\\n\\n.fa-yelp:before {\\n  content: \\\"\\\\f1e9\\\"; }\\n\\n.fa-cc-visa:before {\\n  content: \\\"\\\\f1f0\\\"; }\\n\\n.fa-lastfm:before {\\n  content: \\\"\\\\f202\\\"; }\\n\\n.fa-shopware:before {\\n  content: \\\"\\\\f5b5\\\"; }\\n\\n.fa-creative-commons-nc:before {\\n  content: \\\"\\\\f4e8\\\"; }\\n\\n.fa-aws:before {\\n  content: \\\"\\\\f375\\\"; }\\n\\n.fa-redhat:before {\\n  content: \\\"\\\\f7bc\\\"; }\\n\\n.fa-yoast:before {\\n  content: \\\"\\\\f2b1\\\"; }\\n\\n.fa-cloudflare:before {\\n  content: \\\"\\\\e07d\\\"; }\\n\\n.fa-ups:before {\\n  content: \\\"\\\\f7e0\\\"; }\\n\\n.fa-wpexplorer:before {\\n  content: \\\"\\\\f2de\\\"; }\\n\\n.fa-dyalog:before {\\n  content: \\\"\\\\f399\\\"; }\\n\\n.fa-bity:before {\\n  content: \\\"\\\\f37a\\\"; }\\n\\n.fa-stackpath:before {\\n  content: \\\"\\\\f842\\\"; }\\n\\n.fa-buysellads:before {\\n  content: \\\"\\\\f20d\\\"; }\\n\\n.fa-first-order:before {\\n  content: \\\"\\\\f2b0\\\"; }\\n\\n.fa-modx:before {\\n  content: \\\"\\\\f285\\\"; }\\n\\n.fa-guilded:before {\\n  content: \\\"\\\\e07e\\\"; }\\n\\n.fa-vnv:before {\\n  content: \\\"\\\\f40b\\\"; }\\n\\n.fa-square-js:before {\\n  content: \\\"\\\\f3b9\\\"; }\\n\\n.fa-js-square:before {\\n  content: \\\"\\\\f3b9\\\"; }\\n\\n.fa-microsoft:before {\\n  content: \\\"\\\\f3ca\\\"; }\\n\\n.fa-qq:before {\\n  content: \\\"\\\\f1d6\\\"; }\\n\\n.fa-orcid:before {\\n  content: \\\"\\\\f8d2\\\"; }\\n\\n.fa-java:before {\\n  content: \\\"\\\\f4e4\\\"; }\\n\\n.fa-invision:before {\\n  content: \\\"\\\\f7b0\\\"; }\\n\\n.fa-creative-commons-pd-alt:before {\\n  content: \\\"\\\\f4ed\\\"; }\\n\\n.fa-centercode:before {\\n  content: \\\"\\\\f380\\\"; }\\n\\n.fa-glide-g:before {\\n  content: \\\"\\\\f2a6\\\"; }\\n\\n.fa-drupal:before {\\n  content: \\\"\\\\f1a9\\\"; }\\n\\n.fa-hire-a-helper:before {\\n  content: \\\"\\\\f3b0\\\"; }\\n\\n.fa-creative-commons-by:before {\\n  content: \\\"\\\\f4e7\\\"; }\\n\\n.fa-unity:before {\\n  content: \\\"\\\\e049\\\"; }\\n\\n.fa-whmcs:before {\\n  content: \\\"\\\\f40d\\\"; }\\n\\n.fa-rocketchat:before {\\n  content: \\\"\\\\f3e8\\\"; }\\n\\n.fa-vk:before {\\n  content: \\\"\\\\f189\\\"; }\\n\\n.fa-untappd:before {\\n  content: \\\"\\\\f405\\\"; }\\n\\n.fa-mailchimp:before {\\n  content: \\\"\\\\f59e\\\"; }\\n\\n.fa-css3-alt:before {\\n  content: \\\"\\\\f38b\\\"; }\\n\\n.fa-square-reddit:before {\\n  content: \\\"\\\\f1a2\\\"; }\\n\\n.fa-reddit-square:before {\\n  content: \\\"\\\\f1a2\\\"; }\\n\\n.fa-vimeo-v:before {\\n  content: \\\"\\\\f27d\\\"; }\\n\\n.fa-contao:before {\\n  content: \\\"\\\\f26d\\\"; }\\n\\n.fa-square-font-awesome:before {\\n  content: \\\"\\\\e5ad\\\"; }\\n\\n.fa-deskpro:before {\\n  content: \\\"\\\\f38f\\\"; }\\n\\n.fa-sistrix:before {\\n  content: \\\"\\\\f3ee\\\"; }\\n\\n.fa-square-instagram:before {\\n  content: \\\"\\\\e055\\\"; }\\n\\n.fa-instagram-square:before {\\n  content: \\\"\\\\e055\\\"; }\\n\\n.fa-battle-net:before {\\n  content: \\\"\\\\f835\\\"; }\\n\\n.fa-the-red-yeti:before {\\n  content: \\\"\\\\f69d\\\"; }\\n\\n.fa-square-hacker-news:before {\\n  content: \\\"\\\\f3af\\\"; }\\n\\n.fa-hacker-news-square:before {\\n  content: \\\"\\\\f3af\\\"; }\\n\\n.fa-edge:before {\\n  content: \\\"\\\\f282\\\"; }\\n\\n.fa-napster:before {\\n  content: \\\"\\\\f3d2\\\"; }\\n\\n.fa-square-snapchat:before {\\n  content: \\\"\\\\f2ad\\\"; }\\n\\n.fa-snapchat-square:before {\\n  content: \\\"\\\\f2ad\\\"; }\\n\\n.fa-google-plus-g:before {\\n  content: \\\"\\\\f0d5\\\"; }\\n\\n.fa-artstation:before {\\n  content: \\\"\\\\f77a\\\"; }\\n\\n.fa-markdown:before {\\n  content: \\\"\\\\f60f\\\"; }\\n\\n.fa-sourcetree:before {\\n  content: \\\"\\\\f7d3\\\"; }\\n\\n.fa-google-plus:before {\\n  content: \\\"\\\\f2b3\\\"; }\\n\\n.fa-diaspora:before {\\n  content: \\\"\\\\f791\\\"; }\\n\\n.fa-foursquare:before {\\n  content: \\\"\\\\f180\\\"; }\\n\\n.fa-stack-overflow:before {\\n  content: \\\"\\\\f16c\\\"; }\\n\\n.fa-github-alt:before {\\n  content: \\\"\\\\f113\\\"; }\\n\\n.fa-phoenix-squadron:before {\\n  content: \\\"\\\\f511\\\"; }\\n\\n.fa-pagelines:before {\\n  content: \\\"\\\\f18c\\\"; }\\n\\n.fa-algolia:before {\\n  content: \\\"\\\\f36c\\\"; }\\n\\n.fa-red-river:before {\\n  content: \\\"\\\\f3e3\\\"; }\\n\\n.fa-creative-commons-sa:before {\\n  content: \\\"\\\\f4ef\\\"; }\\n\\n.fa-safari:before {\\n  content: \\\"\\\\f267\\\"; }\\n\\n.fa-google:before {\\n  content: \\\"\\\\f1a0\\\"; }\\n\\n.fa-square-font-awesome-stroke:before {\\n  content: \\\"\\\\f35c\\\"; }\\n\\n.fa-font-awesome-alt:before {\\n  content: \\\"\\\\f35c\\\"; }\\n\\n.fa-atlassian:before {\\n  content: \\\"\\\\f77b\\\"; }\\n\\n.fa-linkedin-in:before {\\n  content: \\\"\\\\f0e1\\\"; }\\n\\n.fa-digital-ocean:before {\\n  content: \\\"\\\\f391\\\"; }\\n\\n.fa-nimblr:before {\\n  content: 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}\\n\\n.fa-reacteurope:before {\\n  content: \\\"\\\\f75d\\\"; }\\n\\n.fa-medium:before {\\n  content: \\\"\\\\f23a\\\"; }\\n\\n.fa-medium-m:before {\\n  content: \\\"\\\\f23a\\\"; }\\n\\n.fa-amilia:before {\\n  content: \\\"\\\\f36d\\\"; }\\n\\n.fa-mixcloud:before {\\n  content: \\\"\\\\f289\\\"; }\\n\\n.fa-flipboard:before {\\n  content: \\\"\\\\f44d\\\"; }\\n\\n.fa-viacoin:before {\\n  content: \\\"\\\\f237\\\"; }\\n\\n.fa-critical-role:before {\\n  content: \\\"\\\\f6c9\\\"; }\\n\\n.fa-sitrox:before {\\n  content: \\\"\\\\e44a\\\"; }\\n\\n.fa-discourse:before {\\n  content: \\\"\\\\f393\\\"; }\\n\\n.fa-joomla:before {\\n  content: \\\"\\\\f1aa\\\"; }\\n\\n.fa-mastodon:before {\\n  content: \\\"\\\\f4f6\\\"; }\\n\\n.fa-airbnb:before {\\n  content: \\\"\\\\f834\\\"; }\\n\\n.fa-wolf-pack-battalion:before {\\n  content: \\\"\\\\f514\\\"; }\\n\\n.fa-buy-n-large:before {\\n  content: \\\"\\\\f8a6\\\"; }\\n\\n.fa-gulp:before {\\n  content: \\\"\\\\f3ae\\\"; }\\n\\n.fa-creative-commons-sampling-plus:before {\\n  content: \\\"\\\\f4f1\\\"; }\\n\\n.fa-strava:before {\\n  content: \\\"\\\\f428\\\"; }\\n\\n.fa-ember:before {\\n  content: \\\"\\\\f423\\\"; }\\n\\n.fa-canadian-maple-leaf:before {\\n  content: \\\"\\\\f785\\\"; }\\n\\n.fa-teamspeak:before {\\n  content: \\\"\\\\f4f9\\\"; }\\n\\n.fa-pushed:before {\\n  content: \\\"\\\\f3e1\\\"; }\\n\\n.fa-wordpress-simple:before {\\n  content: \\\"\\\\f411\\\"; }\\n\\n.fa-nutritionix:before {\\n  content: \\\"\\\\f3d6\\\"; }\\n\\n.fa-wodu:before {\\n  content: \\\"\\\\e088\\\"; }\\n\\n.fa-google-pay:before {\\n  content: \\\"\\\\e079\\\"; }\\n\\n.fa-intercom:before {\\n  content: \\\"\\\\f7af\\\"; }\\n\\n.fa-zhihu:before {\\n  content: \\\"\\\\f63f\\\"; }\\n\\n.fa-korvue:before {\\n  content: \\\"\\\\f42f\\\"; }\\n\\n.fa-pix:before {\\n  content: \\\"\\\\e43a\\\"; }\\n\\n.fa-steam-symbol:before {\\n  content: \\\"\\\\f3f6\\\"; }\\n:root, :host {\\n  --fa-style-family-classic: 'Font Awesome 6 Free';\\n  --fa-font-regular: normal 400 1em/1 'Font Awesome 6 Free'; }\\n\\n@font-face {\\n  font-family: 'Font Awesome 6 Free';\\n  font-style: normal;\\n  font-weight: 400;\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_2___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_3___ + \") format(\\\"truetype\\\"); }\\n\\n.far,\\n.fa-regular {\\n  font-weight: 400; }\\n:root, :host {\\n  --fa-style-family-classic: 'Font Awesome 6 Free';\\n  --fa-font-solid: normal 900 1em/1 'Font Awesome 6 Free'; }\\n\\n@font-face {\\n  font-family: 'Font Awesome 6 Free';\\n  font-style: normal;\\n  font-weight: 900;\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_4___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_5___ + \") format(\\\"truetype\\\"); }\\n\\n.fas,\\n.fa-solid {\\n  font-weight: 900; }\\n@font-face {\\n  font-family: 'Font Awesome 5 Brands';\\n  font-display: block;\\n  font-weight: 400;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_0___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_1___ + \") format(\\\"truetype\\\"); }\\n\\n@font-face {\\n  font-family: 'Font Awesome 5 Free';\\n  font-display: block;\\n  font-weight: 900;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_4___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_5___ + \") format(\\\"truetype\\\"); }\\n\\n@font-face {\\n  font-family: 'Font Awesome 5 Free';\\n  font-display: block;\\n  font-weight: 400;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_2___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_3___ + \") format(\\\"truetype\\\"); }\\n@font-face {\\n  font-family: 'FontAwesome';\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_4___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_5___ + \") format(\\\"truetype\\\"); }\\n\\n@font-face {\\n  font-family: 'FontAwesome';\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_0___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_1___ + \") format(\\\"truetype\\\"); }\\n\\n@font-face {\\n  font-family: 'FontAwesome';\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_2___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_3___ + \") format(\\\"truetype\\\");\\n  unicode-range: U+F003,U+F006,U+F014,U+F016-F017,U+F01A-F01B,U+F01D,U+F022,U+F03E,U+F044,U+F046,U+F05C-F05D,U+F06E,U+F070,U+F087-F088,U+F08A,U+F094,U+F096-F097,U+F09D,U+F0A0,U+F0A2,U+F0A4-F0A7,U+F0C5,U+F0C7,U+F0E5-F0E6,U+F0EB,U+F0F6-F0F8,U+F10C,U+F114-F115,U+F118-F11A,U+F11C-F11D,U+F133,U+F147,U+F14E,U+F150-F152,U+F185-F186,U+F18E,U+F190-F192,U+F196,U+F1C1-F1C9,U+F1D9,U+F1DB,U+F1E3,U+F1EA,U+F1F7,U+F1F9,U+F20A,U+F247-F248,U+F24A,U+F24D,U+F255-F25B,U+F25D,U+F271-F274,U+F278,U+F27B,U+F28C,U+F28E,U+F29C,U+F2B5,U+F2B7,U+F2BA,U+F2BC,U+F2BE,U+F2C0-F2C1,U+F2C3,U+F2D0,U+F2D2,U+F2D4,U+F2DC; }\\n\\n@font-face {\\n  font-family: 'FontAwesome';\\n  font-display: block;\\n  src: url(\" + ___CSS_LOADER_URL_REPLACEMENT_6___ + \") format(\\\"woff2\\\"), url(\" + ___CSS_LOADER_URL_REPLACEMENT_7___ + \") format(\\\"truetype\\\");\\n  unicode-range: U+F041,U+F047,U+F065-F066,U+F07D-F07E,U+F080,U+F08B,U+F08E,U+F090,U+F09A,U+F0AC,U+F0AE,U+F0B2,U+F0D0,U+F0D6,U+F0E4,U+F0EC,U+F10A-F10B,U+F123,U+F13E,U+F148-F149,U+F14C,U+F156,U+F15E,U+F160-F161,U+F163,U+F175-F178,U+F195,U+F1F8,U+F219,U+F27A; }\\n\", \"\"]);\n// Exports\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (___CSS_LOADER_EXPORT___);\n\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/css/all.css?./node_modules/css-loader/dist/cjs.js");
-
-/***/ }),
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 /***/ "./node_modules/css-loader/dist/cjs.js!./src/interface.css":
 /*!*****************************************************************!*\
   !*** ./node_modules/css-loader/dist/cjs.js!./src/interface.css ***!
@@ -1247,7 +1235,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony import */ var _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ../node_modules/css-loader/dist/runtime/api.js */ \"./node_modules/css-loader/dist/runtime/api.js\");\n/* harmony import */ var _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0__);\n// Imports\n\nvar ___CSS_LOADER_EXPORT___ = _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0___default()(function(i){return i[1]});\n// Module\n___CSS_LOADER_EXPORT___.push([module.id, \"\\n.corner_placeholder {\\n    position: absolute;\\n    display: flex;\\n    padding: 8px;\\n    z-index:10;\\n}\\n\\n.top { top: 0; }\\n.right { right: 0; }\\n.left { left: 0; }\\n.bottom { bottom: 0 }\\n\\n.square_button{\\n    border-radius: 8px;\\n    border:none;\\n    padding: 8px;\\n    cursor: pointer;\\n    background-color: rgba(239, 239, 239, 0.95);\\n    color:#555;\\n    width: 56px;\\n    height: 56px;\\n}\\n\\n.square_button:hover{\\n    background-color: #ddd;\\n}\\n\\n/* TOGGLE */\\n\\n.screen_toggle{\\n    cursor: default;\\n    background-color: #ffffff;\\nmargin-left: 4px;\\nborder-radius : 0px;\\n    padding-bottom: 0px ;\\n    padding-top: 0px ;\\n}\\n\\n.screen_toggle:hover{\\n    background-color: #ffffff;\\n}\\n\\n*[id^=\\\"button_edit_name_trash\\\"]{\\n    display: none;\\n        border-radius: 0px;\\n        background-color: #dc3545;\\n        margin-left: 4px;\\n        margin-right: 4px;\\n}\\n\\n*[id^=\\\"button_edit_name_check\\\"]{\\ndisplay: none;\\nborder-radius: 0px;\\nbackground-color: #198754;\\n}\\n\\n/* BRANCH SCALE */\\n\\n.scale_line{\\n    stroke-width:  1.2;\\n    stroke: #555;\\n}\\n\\n.scale_text{\\n\\n}\\n\\n/* SEARCH */\\n\\n.search_input{\\n    border: 1px solid #ddd;\\n    border-right: none;\\n    border-bottom-left-radius: 4px;\\n    border-top-left-radius: 4px;\\n    margin: 2px;\\n    margin-right: 0;\\n    background-color: white;\\n    border-top-right-radius : 0;\\n    border-bottom-right-radius : 0;\\n    /*height: 13px !important;*/\\n}\\n\\n.search_input:hover{background-color: white;}\\n\\n.search_button {\\n    margin: 2px;\\n    margin-left: 0 !important;\\n\\n}\\n\\n/* TOP RIGHT SUB MENU */\\n\\n.tr-buttons{\\n    flex-direction: column;\\n    align-self: end;\\n    display: flex;}\\n\\n.tr-buttons  * {\\n    align-self: flex-end;\\n}\\n\\n.tr-menus{\\n    display: flex;\\n    flex-direction: column;\\n    margin-left: 4px;\\n\\n}\\n\\n.tr-menus > div {\\n    align-self: flex-end;\\n    width: 100%;\\n    margin: 2px;\\n    background-color: rgba(239, 239, 239, 0.95);\\n    display: none;\\n}\\n\\n.menu_export{\\n    border-radius: 4px;\\n\\n\\n}\\n\\n\\n.menu_export > div > button {\\n    background-color: white;\\n}\\n\\n/* Accordion system for settings */\\n.menu_settings{\\n    border-radius: 4px;\\n    background-color: #aaa;\\n    overflow-y: scroll;\\n    max-height:95vh;\\n    scrollbar-width: none; /* Firefox */\\n    -ms-overflow-style: none;  /* Internet Explorer 10+ */\\n}\\n\\n.menu_settings::-webkit-scrollbar { /* WebKit */\\n    width: 0;\\n    height: 0;\\n}\\n\\n/* Style the buttons that are used to open and close the accordion panel */\\n.accordion {\\n    background-color: #eee;\\n    color: #444;\\n    cursor: pointer;\\n    padding: 18px;\\n    width: 100%;\\n    text-align: left;\\n    border: none;\\n    outline: none;\\n    transition: 0.4s;\\n}\\n\\n/* Add a background color to the button if it is clicked on (add the .active class with JS), and when you move the mouse over it (hover) */\\n.active, .accordion:hover {\\n    background-color: #ccc;\\n}\\n\\n/* Style the accordion panel. Note: hidden by default */\\n.panel {\\n    background-color: rgba(250, 250, 250, 0.98) !important;\\n    padding: 0 18px;\\n    background-color: white;\\n    max-height: 0;\\n    overflow: hidden;\\n    transition: max-height 0.2s ease-out;\\n\\n}\\n\\n.accordion:after {\\n    content: '\\\\02795'; /* Unicode character for \\\"plus\\\" sign (+) */\\n    font-size: 13px;\\n    color: #777;\\n    float: right;\\n    margin-left: 5px;\\n}\\n\\n.active:after {\\n    content: \\\"\\\\2796\\\"; /* Unicode character for \\\"minus\\\" sign (-) */\\n}\\n\\n/* SLIDER */\\n\\n.slidecontainer {\\n    width: 100%; /* Width of the outside container */\\n}\\n\\n/* The slider itself */\\n.slider {\\n    -webkit-appearance: none;  /* Override default CSS styles */\\n    appearance: none;\\n    width: 100%; /* Full-width */\\n    height: 12px; /* Specified height */\\n    background: #d3d3d3; /* Grey background */\\n    outline: none; /* Remove outline */\\n    opacity: 0.7; /* Set transparency (for mouse-over effects on hover) */\\n    -webkit-transition: .2s; /* 0.2 seconds transition on hover */\\n    transition: opacity .2s;\\n}\\n\\n/* Mouse-over effects */\\n.slider:hover {\\n    opacity: 1; /* Fully shown on mouse-over */\\n}\\n\\n/* The slider handle (use -webkit- (Chrome, Opera, Safari, Edge) and -moz- (Firefox) to override default look) */\\n.slider::-webkit-slider-thumb {\\n    -webkit-appearance: none; /* Override default look */\\n    appearance: none;\\n    width: 12px; /* Set a specific slider handle width */\\n    height: 12px; /* Slider handle height */\\n    background: #04AA6D; /* Green background */\\n    cursor: pointer; /* Cursor on hover */\\n}\\n\\n.slider::-moz-range-thumb {\\n    width: 12px; /* Set a specific slider handle width */\\n    height: 12px; /* Slider handle height */\\n    background: #04AA6D; /* Green background */\\n    cursor: pointer; /* Cursor on hover */\\n}\\n\\n/* TOGGLE */\\n\\n/* The switch - the box around the slider */\\n.switch {\\n    position: relative;\\n    display: inline-block;\\n    width: 30px;\\n    height: 20px;\\n}\\n\\n/* Hide default HTML checkbox */\\n.switch input {\\n    opacity: 0;\\n    width: 0;\\n    height: 0;\\n}\\n\\n/* The slider */\\n.slider_t {\\n    position: absolute;\\n    cursor: pointer;\\n    top: 0;\\n    left: 0;\\n    right: 0;\\n    bottom: 0;\\n    background-color: #ccc;\\n    -webkit-transition: .4s;\\n    transition: .4s;\\n}\\n\\n.slider_t:before {\\n    position: absolute;\\n    content: \\\"\\\";\\n    height: 16px;\\n    width: 16px;\\n    left: 2px;\\n    bottom: 2px;\\n    background-color: white;\\n    -webkit-transition: .4s;\\n    transition: .4s;\\n}\\n\\ninput:checked + .slider_t {\\n    background-color: #2196F3;\\n}\\n\\ninput:focus + .slider_t {\\n    box-shadow: 0 0 1px #2196F3;\\n}\\n\\ninput:checked + .slider_t:before {\\n    -webkit-transform: translateX(10px);\\n    -ms-transform: translateX(10px);\\n    transform: translateX(10px);\\n}\\n\\n/* Rounded sliders */\\n.slider_t.round {\\n    border-radius: 20px;\\n}\\n\\n.slider_t.round:before {\\n    border-radius: 50%;\\n}\\n\\n\\n\\n.autocomplete {\\n    /*the container must be positioned relative:*/\\n    position: relative;\\n    display: inline-block;\\n}\\n\\n\\n.autocomplete-items {\\n    position: absolute;\\n    border: none;\\n    z-index: 99;\\n    /*position the autocomplete items to be the same width as the container:*/\\n    top: 100%;\\n    left: 0;\\n    padding-left: 4px;\\n    padding-right: 4px;\\n    right: 0;\\n}\\n.autocomplete-items div {\\n    padding: 10px;\\n    cursor: pointer;\\n    background-color: rgba(250, 250, 250, 0.98);\\n\\n}\\n.autocomplete-items div:hover {\\n    /*when hovering an item:*/\\n    background-color: #e9e9e9;\\n}\\n.autocomplete-active {\\n    /*when navigating through the items using the arrow keys:*/\\n    background-color: DodgerBlue !important;\\n    color: #ffffff;\\n}\\n\\n\\n.d3-tip {\\n    font-family: Arial, Helvetica, sans-serif;\\n    line-height: 1.4;\\n    padding: 20px;\\n    pointer-events: none !important;\\n    color: #203d5d;\\n    box-shadow: 0 4px 20px 4px rgba(0, 20, 60, .1), 0 4px 80px -8px rgba(0, 20, 60, .2);\\n    background-color: #fff;\\n    border-radius: 4px;\\n}\\n\\n/* Creates a small triangle extender for the tooltip */\\n.d3-tip:after {\\n    box-sizing: border-box;\\n    display: inline;\\n    font-size: 10px;\\n    width: 100%;\\n    line-height: 1;\\n    color: #fff;\\n    position: absolute;\\n    pointer-events: none;\\n}\\n\\n/* Northward tooltips */\\n.d3-tip.n:after {\\n    content: \\\"▼\\\";\\n    margin: -1px 0 0 0;\\n    top: 100%;\\n    left: 0;\\n    text-align: center;\\n}\\n\\n/* Eastward tooltips */\\n.d3-tip.e:after {\\n    content: \\\"◀\\\";\\n    margin: -4px 0 0 0;\\n    top: 50%;\\n    left: -8px;\\n}\\n\\n/* Southward tooltips */\\n.d3-tip.s:after {\\n    content: \\\"▲\\\";\\n    margin: 0 0 1px 0;\\n    top: -8px;\\n    left: 0;\\n    text-align: center;\\n}\\n\\n/* Westward tooltips */\\n.d3-tip.w:after {\\n    content: \\\"▶\\\";\\n    margin: -4px 0 0 -1px;\\n    top: 50%;\\n    left: 100%;\\n}\\n\\nbody {font-family: Arial, Helvetica, sans-serif;}\\n\\n.dropdrop{\\n    position: relative;\\n    display: none;\\n    margin-top: -24px;\\n\\n}\\n\\n.modal{\\n    z-index: 1000000000 !important;\\n}\\n\\n.dashed_button{\\n    background-color: white;\\n    border: 2px dashed #ddd;\\n    border-radius: 50px;\\n    margin:auto;\\n    height: 36px;\\n    margin-left: 12px;\\n}\\n\\n\\n\\n\", \"\"]);\n// Exports\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (___CSS_LOADER_EXPORT___);\n\n\n//# sourceURL=webpack://PhyloIO/./src/interface.css?./node_modules/css-loader/dist/cjs.js");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony import */ var _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ../node_modules/css-loader/dist/runtime/api.js */ \"./node_modules/css-loader/dist/runtime/api.js\");\n/* harmony import */ var _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0__);\n// Imports\n\nvar ___CSS_LOADER_EXPORT___ = _node_modules_css_loader_dist_runtime_api_js__WEBPACK_IMPORTED_MODULE_0___default()(function(i){return i[1]});\n// Module\n___CSS_LOADER_EXPORT___.push([module.id, \"\\n.corner_placeholder {\\n    position: absolute;\\n    display: flex;\\n    padding: 8px;\\n    z-index:10;\\n}\\n\\n.top { top: 0; }\\n.right { right: 0; }\\n.left { left: 0; }\\n.bottom { bottom: 0 }\\n\\n.square_button{\\n    border-radius: 8px;\\n    border:none;\\n    padding: 8px;\\n    cursor: pointer;\\n    background-color: rgba(239, 239, 239, 0.95);\\n    color:#555;\\n    width: 56px;\\n    height: 56px;\\n}\\n\\n.square_button.mini{\\n\\n    width: 42px;\\n    height: 42px;\\n}\\n\\n.square_button:hover{\\n    background-color: #ddd;\\n}\\n\\n/* TOGGLE */\\n\\n.screen_toggle{\\n    cursor: default;\\n    background-color: #ffffff;\\nmargin-left: 4px;\\nborder-radius : 0px;\\n    padding-bottom: 0px ;\\n    padding-top: 0px ;\\n}\\n\\n.screen_toggle:hover{\\n    background-color: #ffffff;\\n}\\n\\n*[id^=\\\"button_edit_name_trash\\\"]{\\n    display: none;\\n        border-radius: 0px;\\n        background-color: #dc3545;\\n        margin-left: 4px;\\n        margin-right: 4px;\\n}\\n\\n*[id^=\\\"button_edit_name_check\\\"]{\\ndisplay: none;\\nborder-radius: 0px;\\nbackground-color: #198754;\\n}\\n\\n/* BRANCH SCALE */\\n\\n.scale_line{\\n    stroke-width:  1.2;\\n    stroke: #555;\\n}\\n\\n.scale_text{\\n\\n}\\n\\n/* SEARCH */\\n\\n.search_input{\\n    border: 1px solid #ddd;\\n    border-right: none;\\n    border-bottom-left-radius: 4px;\\n    border-top-left-radius: 4px;\\n    margin: 2px;\\n    margin-right: 0;\\n    background-color: white;\\n    border-top-right-radius : 0;\\n    border-bottom-right-radius : 0;\\n    /*height: 13px !important;*/\\n}\\n\\n.search_input:hover{background-color: white;}\\n\\n.search_button {\\n    margin: 2px;\\n    margin-left: 0 !important;\\n\\n}\\n\\n.select_node_face{\\n    margin:4px;\\n    display: inline;\\n}\\n\\n/* TOP RIGHT SUB MENU */\\n\\n.tr-buttons{\\n    flex-direction: column;\\n    align-self: end;\\n    display: flex;}\\n\\n.tr-buttons  * {\\n    align-self: flex-end;\\n}\\n\\n.tr-menus{\\n    display: flex;\\n    flex-direction: column;\\n    margin-left: 4px;\\n\\n}\\n\\n.tr-menus > div {\\n    align-self: flex-end;\\n    width: 100%;\\n    margin: 2px;\\n    background-color: rgba(239, 239, 239, 0.95);\\n    display: none;\\n}\\n\\n.menu_export{\\n    border-radius: 4px;\\n\\n\\n}\\n\\n\\n.menu_export > div > button {\\n    background-color: white;\\n}\\n\\n/* Accordion system for settings */\\n.menu_settings{\\n    border-radius: 4px;\\n    background-color: #aaa;\\n    overflow-y: scroll;\\n    max-height:95vh;\\n    scrollbar-width: none; /* Firefox */\\n    -ms-overflow-style: none;  /* Internet Explorer 10+ */\\n}\\n\\n.menu_settings::-webkit-scrollbar { /* WebKit */\\n    width: 0;\\n    height: 0;\\n}\\n\\n/* Style the buttons that are used to open and close the accordion panel */\\n.accordion {\\n    background-color: #eee;\\n    color: #444;\\n    cursor: pointer;\\n    padding: 18px;\\n    width: 100%;\\n    text-align: left;\\n    border: none;\\n    outline: none;\\n    transition: 0.4s;\\n}\\n\\n/* Add a background color to the button if it is clicked on (add the .active class with JS), and when you move the mouse over it (hover) */\\n.active, .accordion:hover {\\n    background-color: #ccc;\\n}\\n\\n/* Style the accordion panel. Note: hidden by default */\\n.panel {\\n    background-color: rgba(250, 250, 250, 0.98) !important;\\n    padding: 0 18px;\\n    background-color: white;\\n    max-height: 0;\\n    overflow: hidden;\\n    transition: max-height 0.2s ease-out;\\n\\n}\\n\\n.accordion:after {\\n    content: '\\\\02795'; /* Unicode character for \\\"plus\\\" sign (+) */\\n    font-size: 13px;\\n    color: #777;\\n    float: right;\\n    margin-left: 5px;\\n}\\n\\n.active:after {\\n    content: \\\"\\\\2796\\\"; /* Unicode character for \\\"minus\\\" sign (-) */\\n}\\n\\n/* SLIDER */\\n\\n.slidecontainer {\\n    width: 100%; /* Width of the outside container */\\n}\\n\\n/* The slider itself */\\n.slider {\\n    -webkit-appearance: none;  /* Override default CSS styles */\\n    appearance: none;\\n    width: 100%; /* Full-width */\\n    height: 12px; /* Specified height */\\n    background: #d3d3d3; /* Grey background */\\n    outline: none; /* Remove outline */\\n    opacity: 0.7; /* Set transparency (for mouse-over effects on hover) */\\n    -webkit-transition: .2s; /* 0.2 seconds transition on hover */\\n    transition: opacity .2s;\\n}\\n\\n/* Mouse-over effects */\\n.slider:hover {\\n    opacity: 1; /* Fully shown on mouse-over */\\n}\\n\\n/* The slider handle (use -webkit- (Chrome, Opera, Safari, Edge) and -moz- (Firefox) to override default look) */\\n.slider::-webkit-slider-thumb {\\n    -webkit-appearance: none; /* Override default look */\\n    appearance: none;\\n    width: 12px; /* Set a specific slider handle width */\\n    height: 12px; /* Slider handle height */\\n    background: #04AA6D; /* Green background */\\n    cursor: pointer; /* Cursor on hover */\\n}\\n\\n.slider::-moz-range-thumb {\\n    width: 12px; /* Set a specific slider handle width */\\n    height: 12px; /* Slider handle height */\\n    background: #04AA6D; /* Green background */\\n    cursor: pointer; /* Cursor on hover */\\n}\\n\\n/* TOGGLE */\\n\\n/* The switch - the box around the slider */\\n.switch {\\n    position: relative;\\n    display: inline-block;\\n    width: 30px;\\n    height: 20px;\\n}\\n\\n/* Hide default HTML checkbox */\\n.switch input {\\n    opacity: 0;\\n    width: 0;\\n    height: 0;\\n}\\n\\n/* The slider */\\n.slider_t {\\n    position: absolute;\\n    cursor: pointer;\\n    top: 0;\\n    left: 0;\\n    right: 0;\\n    bottom: 0;\\n    background-color: #ccc;\\n    -webkit-transition: .4s;\\n    transition: .4s;\\n}\\n\\n.slider_t:before {\\n    position: absolute;\\n    content: \\\"\\\";\\n    height: 16px;\\n    width: 16px;\\n    left: 2px;\\n    bottom: 2px;\\n    background-color: white;\\n    -webkit-transition: .4s;\\n    transition: .4s;\\n}\\n\\ninput:checked + .slider_t {\\n    background-color: #2196F3;\\n}\\n\\ninput:focus + .slider_t {\\n    box-shadow: 0 0 1px #2196F3;\\n}\\n\\ninput:checked + .slider_t:before {\\n    -webkit-transform: translateX(10px);\\n    -ms-transform: translateX(10px);\\n    transform: translateX(10px);\\n}\\n\\n/* Rounded sliders */\\n.slider_t.round {\\n    border-radius: 20px;\\n}\\n\\n.slider_t.round:before {\\n    border-radius: 50%;\\n}\\n\\n\\n\\n.autocomplete {\\n    /*the container must be positioned relative:*/\\n    position: relative;\\n    display: inline-block;\\n}\\n\\n\\n.autocomplete-items {\\n    position: absolute;\\n    border: none;\\n    z-index: 99;\\n    /*position the autocomplete items to be the same width as the container:*/\\n    top: 100%;\\n    left: 0;\\n    padding-left: 4px;\\n    padding-right: 4px;\\n    right: 0;\\n}\\n.autocomplete-items div {\\n    padding: 10px;\\n    cursor: pointer;\\n    background-color: rgba(250, 250, 250, 0.98);\\n\\n}\\n.autocomplete-items div:hover {\\n    /*when hovering an item:*/\\n    background-color: #e9e9e9;\\n}\\n.autocomplete-active {\\n    /*when navigating through the items using the arrow keys:*/\\n    background-color: DodgerBlue !important;\\n    color: #ffffff;\\n}\\n\\n\\n.d3-tip {\\n    font-family: Arial, Helvetica, sans-serif;\\n    line-height: 1.4;\\n    padding: 20px;\\n    pointer-events: none !important;\\n    color: #203d5d;\\n    box-shadow: 0 4px 20px 4px rgba(0, 20, 60, .1), 0 4px 80px -8px rgba(0, 20, 60, .2);\\n    background-color: #fff;\\n    border-radius: 4px;\\n}\\n\\n/* Creates a small triangle extender for the tooltip */\\n.d3-tip:after {\\n    box-sizing: border-box;\\n    display: inline;\\n    font-size: 10px;\\n    width: 100%;\\n    line-height: 1;\\n    color: #fff;\\n    position: absolute;\\n    pointer-events: none;\\n}\\n\\n/* Northward tooltips */\\n.d3-tip.n:after {\\n    content: \\\"▼\\\";\\n    margin: -1px 0 0 0;\\n    top: 100%;\\n    left: 0;\\n    text-align: center;\\n}\\n\\n/* Eastward tooltips */\\n.d3-tip.e:after {\\n    content: \\\"◀\\\";\\n    margin: -4px 0 0 0;\\n    top: 50%;\\n    left: -8px;\\n}\\n\\n/* Southward tooltips */\\n.d3-tip.s:after {\\n    content: \\\"▲\\\";\\n    margin: 0 0 1px 0;\\n    top: -8px;\\n    left: 0;\\n    text-align: center;\\n}\\n\\n/* Westward tooltips */\\n.d3-tip.w:after {\\n    content: \\\"▶\\\";\\n    margin: -4px 0 0 -1px;\\n    top: 50%;\\n    left: 100%;\\n}\\n\\nbody {font-family: Arial, Helvetica, sans-serif;}\\n\\n.dropdrop{\\n    position: relative;\\n    display: none;\\n    margin-top: -24px;\\n\\n}\\n\\n.modal{\\n    z-index: 1000000000 !important;\\n}\\n\\n.dashed_button{\\n    background-color: white;\\n    border: 2px dashed #ddd;\\n    border-radius: 50px;\\n    margin:auto;\\n    height: 36px;\\n    margin-left: 12px;\\n}\\n\\n\\n\\n\", \"\"]);\n// Exports\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (___CSS_LOADER_EXPORT___);\n\n\n//# sourceURL=webpack://PhyloIO/./src/interface.css?./node_modules/css-loader/dist/cjs.js");
 
 /***/ }),
 
@@ -1284,17 +1272,6 @@ eval("\n\n/*\n  MIT License http://www.opensource.org/licenses/mit-license.php\n
 
 /***/ }),
 
-/***/ "./node_modules/css-loader/dist/runtime/getUrl.js":
-/*!********************************************************!*\
-  !*** ./node_modules/css-loader/dist/runtime/getUrl.js ***!
-  \********************************************************/
-/***/ ((module) => {
-
-"use strict";
-eval("\n\nmodule.exports = function (url, options) {\n  if (!options) {\n    // eslint-disable-next-line no-param-reassign\n    options = {};\n  } // eslint-disable-next-line no-underscore-dangle, no-param-reassign\n\n\n  url = url && url.__esModule ? url.default : url;\n\n  if (typeof url !== \"string\") {\n    return url;\n  } // If url is already wrapped in quotes, remove them\n\n\n  if (/^['\"].*['\"]$/.test(url)) {\n    // eslint-disable-next-line no-param-reassign\n    url = url.slice(1, -1);\n  }\n\n  if (options.hash) {\n    // eslint-disable-next-line no-param-reassign\n    url += options.hash;\n  } // Should url be wrapped?\n  // See https://drafts.csswg.org/css-values-3/#urls\n\n\n  if (/[\"'() \\t\\n]/.test(url) || options.needQuotes) {\n    return \"\\\"\".concat(url.replace(/\"/g, '\\\\\"').replace(/\\n/g, \"\\\\n\"), \"\\\"\");\n  }\n\n  return url;\n};\n\n//# sourceURL=webpack://PhyloIO/./node_modules/css-loader/dist/runtime/getUrl.js?");
-
-/***/ }),
-
 /***/ "./node_modules/d3-array/src/array.js":
 /*!********************************************!*\
   !*** ./node_modules/d3-array/src/array.js ***!
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-  \*******************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-brands-400.ttf\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-brands-400.ttf?");
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-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-brands-400.woff2 ***!
-  \*********************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-brands-400.woff2\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-brands-400.woff2?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.ttf":
-/*!********************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.ttf ***!
-  \********************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-regular-400.ttf\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.ttf?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.woff2":
-/*!**********************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.woff2 ***!
-  \**********************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-regular-400.woff2\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-regular-400.woff2?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.ttf":
-/*!******************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.ttf ***!
-  \******************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-solid-900.ttf\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.ttf?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.woff2":
-/*!********************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.woff2 ***!
-  \********************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-solid-900.woff2\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-solid-900.woff2?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.ttf":
-/*!************************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.ttf ***!
-  \************************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-v4compatibility.ttf\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.ttf?");
-
-/***/ }),
-
-/***/ "./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.woff2":
-/*!**************************************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.woff2 ***!
-  \**************************************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (__webpack_require__.p + \"fonts/fa-v4compatibility.woff2\");\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/webfonts/fa-v4compatibility.woff2?");
-
-/***/ }),
-
 /***/ "./node_modules/file-saver/dist/FileSaver.min.js":
 /*!*******************************************************!*\
   !*** ./node_modules/file-saver/dist/FileSaver.min.js ***!
@@ -8486,6 +8375,16 @@ eval("/* eslint-disable node/no-deprecated-api */\n\n\n\nvar buffer = __webpack_
 
 /***/ }),
 
+/***/ "./node_modules/sax/lib/sax.js":
+/*!*************************************!*\
+  !*** ./node_modules/sax/lib/sax.js ***!
+  \*************************************/
+/***/ ((__unused_webpack_module, exports, __webpack_require__) => {
+
+eval(";(function (sax) { // wrapper for non-node envs\n  sax.parser = function (strict, opt) { return new SAXParser(strict, opt) }\n  sax.SAXParser = SAXParser\n  sax.SAXStream = SAXStream\n  sax.createStream = createStream\n\n  // When we pass the MAX_BUFFER_LENGTH position, start checking for buffer overruns.\n  // When we check, schedule the next check for MAX_BUFFER_LENGTH - (max(buffer lengths)),\n  // since that's the earliest that a buffer overrun could occur.  This way, checks are\n  // as rare as required, but as often as necessary to ensure never crossing this bound.\n  // Furthermore, buffers are only tested at most once per write(), so passing a very\n  // large string into write() might have undesirable effects, but this is manageable by\n  // the caller, so it is assumed to be safe.  Thus, a call to write() may, in the extreme\n  // edge case, result in creating at most one complete copy of the string passed in.\n  // Set to Infinity to have unlimited buffers.\n  sax.MAX_BUFFER_LENGTH = 64 * 1024\n\n  var buffers = [\n    'comment', 'sgmlDecl', 'textNode', 'tagName', 'doctype',\n    'procInstName', 'procInstBody', 'entity', 'attribName',\n    'attribValue', 'cdata', 'script'\n  ]\n\n  sax.EVENTS = [\n    'text',\n    'processinginstruction',\n    'sgmldeclaration',\n    'doctype',\n    'comment',\n    'opentagstart',\n    'attribute',\n    'opentag',\n    'closetag',\n    'opencdata',\n    'cdata',\n    'closecdata',\n    'error',\n    'end',\n    'ready',\n    'script',\n    'opennamespace',\n    'closenamespace'\n  ]\n\n  function SAXParser (strict, opt) {\n    if (!(this instanceof SAXParser)) {\n      return new SAXParser(strict, opt)\n    }\n\n    var parser = this\n    clearBuffers(parser)\n    parser.q = parser.c = ''\n    parser.bufferCheckPosition = sax.MAX_BUFFER_LENGTH\n    parser.opt = opt || {}\n    parser.opt.lowercase = parser.opt.lowercase || parser.opt.lowercasetags\n    parser.looseCase = parser.opt.lowercase ? 'toLowerCase' : 'toUpperCase'\n    parser.tags = []\n    parser.closed = parser.closedRoot = parser.sawRoot = false\n    parser.tag = parser.error = null\n    parser.strict = !!strict\n    parser.noscript = !!(strict || parser.opt.noscript)\n    parser.state = S.BEGIN\n    parser.strictEntities = parser.opt.strictEntities\n    parser.ENTITIES = parser.strictEntities ? Object.create(sax.XML_ENTITIES) : Object.create(sax.ENTITIES)\n    parser.attribList = []\n\n    // namespaces form a prototype chain.\n    // it always points at the current tag,\n    // which protos to its parent tag.\n    if (parser.opt.xmlns) {\n      parser.ns = Object.create(rootNS)\n    }\n\n    // disallow unquoted attribute values if not otherwise configured\n    // and strict mode is true\n    if (parser.opt.unquotedAttributeValues === undefined) {\n      parser.opt.unquotedAttributeValues = !strict;\n    }\n\n    // mostly just for error reporting\n    parser.trackPosition = parser.opt.position !== false\n    if (parser.trackPosition) {\n      parser.position = parser.line = parser.column = 0\n    }\n    emit(parser, 'onready')\n  }\n\n  if (!Object.create) {\n    Object.create = function (o) {\n      function F () {}\n      F.prototype = o\n      var newf = new F()\n      return newf\n    }\n  }\n\n  if (!Object.keys) {\n    Object.keys = function (o) {\n      var a = []\n      for (var i in o) if (o.hasOwnProperty(i)) a.push(i)\n      return a\n    }\n  }\n\n  function checkBufferLength (parser) {\n    var maxAllowed = Math.max(sax.MAX_BUFFER_LENGTH, 10)\n    var maxActual = 0\n    for (var i = 0, l = buffers.length; i < l; i++) {\n      var len = parser[buffers[i]].length\n      if (len > maxAllowed) {\n        // Text/cdata nodes can get big, and since they're buffered,\n        // we can get here under normal conditions.\n        // Avoid issues by emitting the text node now,\n        // so at least it won't get any bigger.\n        switch (buffers[i]) {\n          case 'textNode':\n            closeText(parser)\n            break\n\n          case 'cdata':\n            emitNode(parser, 'oncdata', parser.cdata)\n            parser.cdata = ''\n            break\n\n          case 'script':\n            emitNode(parser, 'onscript', parser.script)\n            parser.script = ''\n            break\n\n          default:\n            error(parser, 'Max buffer length exceeded: ' + buffers[i])\n        }\n      }\n      maxActual = Math.max(maxActual, len)\n    }\n    // schedule the next check for the earliest possible buffer overrun.\n    var m = sax.MAX_BUFFER_LENGTH - maxActual\n    parser.bufferCheckPosition = m + parser.position\n  }\n\n  function clearBuffers (parser) {\n    for (var i = 0, l = buffers.length; i < l; i++) {\n      parser[buffers[i]] = ''\n    }\n  }\n\n  function flushBuffers (parser) {\n    closeText(parser)\n    if (parser.cdata !== '') {\n      emitNode(parser, 'oncdata', parser.cdata)\n      parser.cdata = ''\n    }\n    if (parser.script !== '') {\n      emitNode(parser, 'onscript', parser.script)\n      parser.script = ''\n    }\n  }\n\n  SAXParser.prototype = {\n    end: function () { end(this) },\n    write: write,\n    resume: function () { this.error = null; return this },\n    close: function () { return this.write(null) },\n    flush: function () { flushBuffers(this) }\n  }\n\n  var Stream\n  try {\n    Stream = (__webpack_require__(/*! stream */ \"./node_modules/stream-browserify/index.js\").Stream)\n  } catch (ex) {\n    Stream = function () {}\n  }\n  if (!Stream) Stream = function () {}\n\n  var streamWraps = sax.EVENTS.filter(function (ev) {\n    return ev !== 'error' && ev !== 'end'\n  })\n\n  function createStream (strict, opt) {\n    return new SAXStream(strict, opt)\n  }\n\n  function SAXStream (strict, opt) {\n    if (!(this instanceof SAXStream)) {\n      return new SAXStream(strict, opt)\n    }\n\n    Stream.apply(this)\n\n    this._parser = new SAXParser(strict, opt)\n    this.writable = true\n    this.readable = true\n\n    var me = this\n\n    this._parser.onend = function () {\n      me.emit('end')\n    }\n\n    this._parser.onerror = function (er) {\n      me.emit('error', er)\n\n      // if didn't throw, then means error was handled.\n      // go ahead and clear error, so we can write again.\n      me._parser.error = null\n    }\n\n    this._decoder = null\n\n    streamWraps.forEach(function (ev) {\n      Object.defineProperty(me, 'on' + ev, {\n        get: function () {\n          return me._parser['on' + ev]\n        },\n        set: function (h) {\n          if (!h) {\n            me.removeAllListeners(ev)\n            me._parser['on' + ev] = h\n            return h\n          }\n          me.on(ev, h)\n        },\n        enumerable: true,\n        configurable: false\n      })\n    })\n  }\n\n  SAXStream.prototype = Object.create(Stream.prototype, {\n    constructor: {\n      value: SAXStream\n    }\n  })\n\n  SAXStream.prototype.write = function (data) {\n    if (typeof Buffer === 'function' &&\n      typeof Buffer.isBuffer === 'function' &&\n      Buffer.isBuffer(data)) {\n      if (!this._decoder) {\n        var SD = (__webpack_require__(/*! string_decoder */ \"./node_modules/string_decoder/lib/string_decoder.js\").StringDecoder)\n        this._decoder = new SD('utf8')\n      }\n      data = this._decoder.write(data)\n    }\n\n    this._parser.write(data.toString())\n    this.emit('data', data)\n    return true\n  }\n\n  SAXStream.prototype.end = function (chunk) {\n    if (chunk && chunk.length) {\n      this.write(chunk)\n    }\n    this._parser.end()\n    return true\n  }\n\n  SAXStream.prototype.on = function (ev, handler) {\n    var me = this\n    if (!me._parser['on' + ev] && streamWraps.indexOf(ev) !== -1) {\n      me._parser['on' + ev] = function () {\n        var args = arguments.length === 1 ? [arguments[0]] : Array.apply(null, arguments)\n        args.splice(0, 0, ev)\n        me.emit.apply(me, args)\n      }\n    }\n\n    return Stream.prototype.on.call(me, ev, handler)\n  }\n\n  // this really needs to be replaced with character classes.\n  // XML allows all manner of ridiculous numbers and digits.\n  var CDATA = '[CDATA['\n  var DOCTYPE = 'DOCTYPE'\n  var XML_NAMESPACE = 'http://www.w3.org/XML/1998/namespace'\n  var XMLNS_NAMESPACE = 'http://www.w3.org/2000/xmlns/'\n  var rootNS = { xml: XML_NAMESPACE, xmlns: XMLNS_NAMESPACE }\n\n  // http://www.w3.org/TR/REC-xml/#NT-NameStartChar\n  // This implementation works on strings, a single character at a time\n  // as such, it cannot ever support astral-plane characters (10000-EFFFF)\n  // without a significant breaking change to either this  parser, or the\n  // JavaScript language.  Implementation of an emoji-capable xml parser\n  // is left as an exercise for the reader.\n  var nameStart = /[:_A-Za-z\\u00C0-\\u00D6\\u00D8-\\u00F6\\u00F8-\\u02FF\\u0370-\\u037D\\u037F-\\u1FFF\\u200C-\\u200D\\u2070-\\u218F\\u2C00-\\u2FEF\\u3001-\\uD7FF\\uF900-\\uFDCF\\uFDF0-\\uFFFD]/\n\n  var nameBody = /[:_A-Za-z\\u00C0-\\u00D6\\u00D8-\\u00F6\\u00F8-\\u02FF\\u0370-\\u037D\\u037F-\\u1FFF\\u200C-\\u200D\\u2070-\\u218F\\u2C00-\\u2FEF\\u3001-\\uD7FF\\uF900-\\uFDCF\\uFDF0-\\uFFFD\\u00B7\\u0300-\\u036F\\u203F-\\u2040.\\d-]/\n\n  var entityStart = /[#:_A-Za-z\\u00C0-\\u00D6\\u00D8-\\u00F6\\u00F8-\\u02FF\\u0370-\\u037D\\u037F-\\u1FFF\\u200C-\\u200D\\u2070-\\u218F\\u2C00-\\u2FEF\\u3001-\\uD7FF\\uF900-\\uFDCF\\uFDF0-\\uFFFD]/\n  var entityBody = /[#:_A-Za-z\\u00C0-\\u00D6\\u00D8-\\u00F6\\u00F8-\\u02FF\\u0370-\\u037D\\u037F-\\u1FFF\\u200C-\\u200D\\u2070-\\u218F\\u2C00-\\u2FEF\\u3001-\\uD7FF\\uF900-\\uFDCF\\uFDF0-\\uFFFD\\u00B7\\u0300-\\u036F\\u203F-\\u2040.\\d-]/\n\n  function isWhitespace (c) {\n    return c === ' ' || c === '\\n' || c === '\\r' || c === '\\t'\n  }\n\n  function isQuote (c) {\n    return c === '\"' || c === '\\''\n  }\n\n  function isAttribEnd (c) {\n    return c === '>' || isWhitespace(c)\n  }\n\n  function isMatch (regex, c) {\n    return regex.test(c)\n  }\n\n  function notMatch (regex, c) {\n    return !isMatch(regex, c)\n  }\n\n  var S = 0\n  sax.STATE = {\n    BEGIN: S++, // leading byte order mark or whitespace\n    BEGIN_WHITESPACE: S++, // leading whitespace\n    TEXT: S++, // general stuff\n    TEXT_ENTITY: S++, // &amp and such.\n    OPEN_WAKA: S++, // <\n    SGML_DECL: S++, // <!BLARG\n    SGML_DECL_QUOTED: S++, // <!BLARG foo \"bar\n    DOCTYPE: S++, // <!DOCTYPE\n    DOCTYPE_QUOTED: S++, // <!DOCTYPE \"//blah\n    DOCTYPE_DTD: S++, // <!DOCTYPE \"//blah\" [ ...\n    DOCTYPE_DTD_QUOTED: S++, // <!DOCTYPE \"//blah\" [ \"foo\n    COMMENT_STARTING: S++, // <!-\n    COMMENT: S++, // <!--\n    COMMENT_ENDING: S++, // <!-- blah -\n    COMMENT_ENDED: S++, // <!-- blah --\n    CDATA: S++, // <![CDATA[ something\n    CDATA_ENDING: S++, // ]\n    CDATA_ENDING_2: S++, // ]]\n    PROC_INST: S++, // <?hi\n    PROC_INST_BODY: S++, // <?hi there\n    PROC_INST_ENDING: S++, // <?hi \"there\" ?\n    OPEN_TAG: S++, // <strong\n    OPEN_TAG_SLASH: S++, // <strong /\n    ATTRIB: S++, // <a\n    ATTRIB_NAME: S++, // <a foo\n    ATTRIB_NAME_SAW_WHITE: S++, // <a foo _\n    ATTRIB_VALUE: S++, // <a foo=\n    ATTRIB_VALUE_QUOTED: S++, // <a foo=\"bar\n    ATTRIB_VALUE_CLOSED: S++, // <a foo=\"bar\"\n    ATTRIB_VALUE_UNQUOTED: S++, // <a foo=bar\n    ATTRIB_VALUE_ENTITY_Q: S++, // <foo bar=\"&quot;\"\n    ATTRIB_VALUE_ENTITY_U: S++, // <foo bar=&quot\n    CLOSE_TAG: S++, // </a\n    CLOSE_TAG_SAW_WHITE: S++, // </a   >\n    SCRIPT: S++, // <script> ...\n    SCRIPT_ENDING: S++ // <script> ... <\n  }\n\n  sax.XML_ENTITIES = {\n    'amp': '&',\n    'gt': '>',\n    'lt': '<',\n    'quot': '\"',\n    'apos': \"'\"\n  }\n\n  sax.ENTITIES = {\n    'amp': '&',\n    'gt': '>',\n    'lt': '<',\n    'quot': '\"',\n    'apos': \"'\",\n    'AElig': 198,\n    'Aacute': 193,\n    'Acirc': 194,\n    'Agrave': 192,\n    'Aring': 197,\n    'Atilde': 195,\n    'Auml': 196,\n    'Ccedil': 199,\n    'ETH': 208,\n    'Eacute': 201,\n    'Ecirc': 202,\n    'Egrave': 200,\n    'Euml': 203,\n    'Iacute': 205,\n    'Icirc': 206,\n    'Igrave': 204,\n    'Iuml': 207,\n    'Ntilde': 209,\n    'Oacute': 211,\n    'Ocirc': 212,\n    'Ograve': 210,\n    'Oslash': 216,\n    'Otilde': 213,\n    'Ouml': 214,\n    'THORN': 222,\n    'Uacute': 218,\n    'Ucirc': 219,\n    'Ugrave': 217,\n    'Uuml': 220,\n    'Yacute': 221,\n    'aacute': 225,\n    'acirc': 226,\n    'aelig': 230,\n    'agrave': 224,\n    'aring': 229,\n    'atilde': 227,\n    'auml': 228,\n    'ccedil': 231,\n    'eacute': 233,\n    'ecirc': 234,\n    'egrave': 232,\n    'eth': 240,\n    'euml': 235,\n    'iacute': 237,\n    'icirc': 238,\n    'igrave': 236,\n    'iuml': 239,\n    'ntilde': 241,\n    'oacute': 243,\n    'ocirc': 244,\n    'ograve': 242,\n    'oslash': 248,\n    'otilde': 245,\n    'ouml': 246,\n    'szlig': 223,\n    'thorn': 254,\n    'uacute': 250,\n    'ucirc': 251,\n    'ugrave': 249,\n    'uuml': 252,\n    'yacute': 253,\n    'yuml': 255,\n    'copy': 169,\n    'reg': 174,\n    'nbsp': 160,\n    'iexcl': 161,\n    'cent': 162,\n    'pound': 163,\n    'curren': 164,\n    'yen': 165,\n    'brvbar': 166,\n    'sect': 167,\n    'uml': 168,\n    'ordf': 170,\n    'laquo': 171,\n    'not': 172,\n    'shy': 173,\n    'macr': 175,\n    'deg': 176,\n    'plusmn': 177,\n    'sup1': 185,\n    'sup2': 178,\n    'sup3': 179,\n    'acute': 180,\n    'micro': 181,\n    'para': 182,\n    'middot': 183,\n    'cedil': 184,\n    'ordm': 186,\n    'raquo': 187,\n    'frac14': 188,\n    'frac12': 189,\n    'frac34': 190,\n    'iquest': 191,\n    'times': 215,\n    'divide': 247,\n    'OElig': 338,\n    'oelig': 339,\n    'Scaron': 352,\n    'scaron': 353,\n    'Yuml': 376,\n    'fnof': 402,\n    'circ': 710,\n    'tilde': 732,\n    'Alpha': 913,\n    'Beta': 914,\n    'Gamma': 915,\n    'Delta': 916,\n    'Epsilon': 917,\n    'Zeta': 918,\n    'Eta': 919,\n    'Theta': 920,\n    'Iota': 921,\n    'Kappa': 922,\n    'Lambda': 923,\n    'Mu': 924,\n    'Nu': 925,\n    'Xi': 926,\n    'Omicron': 927,\n    'Pi': 928,\n    'Rho': 929,\n    'Sigma': 931,\n    'Tau': 932,\n    'Upsilon': 933,\n    'Phi': 934,\n    'Chi': 935,\n    'Psi': 936,\n    'Omega': 937,\n    'alpha': 945,\n    'beta': 946,\n    'gamma': 947,\n    'delta': 948,\n    'epsilon': 949,\n    'zeta': 950,\n    'eta': 951,\n    'theta': 952,\n    'iota': 953,\n    'kappa': 954,\n    'lambda': 955,\n    'mu': 956,\n    'nu': 957,\n    'xi': 958,\n    'omicron': 959,\n    'pi': 960,\n    'rho': 961,\n    'sigmaf': 962,\n    'sigma': 963,\n    'tau': 964,\n    'upsilon': 965,\n    'phi': 966,\n    'chi': 967,\n    'psi': 968,\n    'omega': 969,\n    'thetasym': 977,\n    'upsih': 978,\n    'piv': 982,\n    'ensp': 8194,\n    'emsp': 8195,\n    'thinsp': 8201,\n    'zwnj': 8204,\n    'zwj': 8205,\n    'lrm': 8206,\n    'rlm': 8207,\n    'ndash': 8211,\n    'mdash': 8212,\n    'lsquo': 8216,\n    'rsquo': 8217,\n    'sbquo': 8218,\n    'ldquo': 8220,\n    'rdquo': 8221,\n    'bdquo': 8222,\n    'dagger': 8224,\n    'Dagger': 8225,\n    'bull': 8226,\n    'hellip': 8230,\n    'permil': 8240,\n    'prime': 8242,\n    'Prime': 8243,\n    'lsaquo': 8249,\n    'rsaquo': 8250,\n    'oline': 8254,\n    'frasl': 8260,\n    'euro': 8364,\n    'image': 8465,\n    'weierp': 8472,\n    'real': 8476,\n    'trade': 8482,\n    'alefsym': 8501,\n    'larr': 8592,\n    'uarr': 8593,\n    'rarr': 8594,\n    'darr': 8595,\n    'harr': 8596,\n    'crarr': 8629,\n    'lArr': 8656,\n    'uArr': 8657,\n    'rArr': 8658,\n    'dArr': 8659,\n    'hArr': 8660,\n    'forall': 8704,\n    'part': 8706,\n    'exist': 8707,\n    'empty': 8709,\n    'nabla': 8711,\n    'isin': 8712,\n    'notin': 8713,\n    'ni': 8715,\n    'prod': 8719,\n    'sum': 8721,\n    'minus': 8722,\n    'lowast': 8727,\n    'radic': 8730,\n    'prop': 8733,\n    'infin': 8734,\n    'ang': 8736,\n    'and': 8743,\n    'or': 8744,\n    'cap': 8745,\n    'cup': 8746,\n    'int': 8747,\n    'there4': 8756,\n    'sim': 8764,\n    'cong': 8773,\n    'asymp': 8776,\n    'ne': 8800,\n    'equiv': 8801,\n    'le': 8804,\n    'ge': 8805,\n    'sub': 8834,\n    'sup': 8835,\n    'nsub': 8836,\n    'sube': 8838,\n    'supe': 8839,\n    'oplus': 8853,\n    'otimes': 8855,\n    'perp': 8869,\n    'sdot': 8901,\n    'lceil': 8968,\n    'rceil': 8969,\n    'lfloor': 8970,\n    'rfloor': 8971,\n    'lang': 9001,\n    'rang': 9002,\n    'loz': 9674,\n    'spades': 9824,\n    'clubs': 9827,\n    'hearts': 9829,\n    'diams': 9830\n  }\n\n  Object.keys(sax.ENTITIES).forEach(function (key) {\n    var e = sax.ENTITIES[key]\n    var s = typeof e === 'number' ? String.fromCharCode(e) : e\n    sax.ENTITIES[key] = s\n  })\n\n  for (var s in sax.STATE) {\n    sax.STATE[sax.STATE[s]] = s\n  }\n\n  // shorthand\n  S = sax.STATE\n\n  function emit (parser, event, data) {\n    parser[event] && parser[event](data)\n  }\n\n  function emitNode (parser, nodeType, data) {\n    if (parser.textNode) closeText(parser)\n    emit(parser, nodeType, data)\n  }\n\n  function closeText (parser) {\n    parser.textNode = textopts(parser.opt, parser.textNode)\n    if (parser.textNode) emit(parser, 'ontext', parser.textNode)\n    parser.textNode = ''\n  }\n\n  function textopts (opt, text) {\n    if (opt.trim) text = text.trim()\n    if (opt.normalize) text = text.replace(/\\s+/g, ' ')\n    return text\n  }\n\n  function error (parser, er) {\n    closeText(parser)\n    if (parser.trackPosition) {\n      er += '\\nLine: ' + parser.line +\n        '\\nColumn: ' + parser.column +\n        '\\nChar: ' + parser.c\n    }\n    er = new Error(er)\n    parser.error = er\n    emit(parser, 'onerror', er)\n    return parser\n  }\n\n  function end (parser) {\n    if (parser.sawRoot && !parser.closedRoot) strictFail(parser, 'Unclosed root tag')\n    if ((parser.state !== S.BEGIN) &&\n      (parser.state !== S.BEGIN_WHITESPACE) &&\n      (parser.state !== S.TEXT)) {\n      error(parser, 'Unexpected end')\n    }\n    closeText(parser)\n    parser.c = ''\n    parser.closed = true\n    emit(parser, 'onend')\n    SAXParser.call(parser, parser.strict, parser.opt)\n    return parser\n  }\n\n  function strictFail (parser, message) {\n    if (typeof parser !== 'object' || !(parser instanceof SAXParser)) {\n      throw new Error('bad call to strictFail')\n    }\n    if (parser.strict) {\n      error(parser, message)\n    }\n  }\n\n  function newTag (parser) {\n    if (!parser.strict) parser.tagName = parser.tagName[parser.looseCase]()\n    var parent = parser.tags[parser.tags.length - 1] || parser\n    var tag = parser.tag = { name: parser.tagName, attributes: {} }\n\n    // will be overridden if tag contails an xmlns=\"foo\" or xmlns:foo=\"bar\"\n    if (parser.opt.xmlns) {\n      tag.ns = parent.ns\n    }\n    parser.attribList.length = 0\n    emitNode(parser, 'onopentagstart', tag)\n  }\n\n  function qname (name, attribute) {\n    var i = name.indexOf(':')\n    var qualName = i < 0 ? [ '', name ] : name.split(':')\n    var prefix = qualName[0]\n    var local = qualName[1]\n\n    // <x \"xmlns\"=\"http://foo\">\n    if (attribute && name === 'xmlns') {\n      prefix = 'xmlns'\n      local = ''\n    }\n\n    return { prefix: prefix, local: local }\n  }\n\n  function attrib (parser) {\n    if (!parser.strict) {\n      parser.attribName = parser.attribName[parser.looseCase]()\n    }\n\n    if (parser.attribList.indexOf(parser.attribName) !== -1 ||\n      parser.tag.attributes.hasOwnProperty(parser.attribName)) {\n      parser.attribName = parser.attribValue = ''\n      return\n    }\n\n    if (parser.opt.xmlns) {\n      var qn = qname(parser.attribName, true)\n      var prefix = qn.prefix\n      var local = qn.local\n\n      if (prefix === 'xmlns') {\n        // namespace binding attribute. push the binding into scope\n        if (local === 'xml' && parser.attribValue !== XML_NAMESPACE) {\n          strictFail(parser,\n            'xml: prefix must be bound to ' + XML_NAMESPACE + '\\n' +\n            'Actual: ' + parser.attribValue)\n        } else if (local === 'xmlns' && parser.attribValue !== XMLNS_NAMESPACE) {\n          strictFail(parser,\n            'xmlns: prefix must be bound to ' + XMLNS_NAMESPACE + '\\n' +\n            'Actual: ' + parser.attribValue)\n        } else {\n          var tag = parser.tag\n          var parent = parser.tags[parser.tags.length - 1] || parser\n          if (tag.ns === parent.ns) {\n            tag.ns = Object.create(parent.ns)\n          }\n          tag.ns[local] = parser.attribValue\n        }\n      }\n\n      // defer onattribute events until all attributes have been seen\n      // so any new bindings can take effect. preserve attribute order\n      // so deferred events can be emitted in document order\n      parser.attribList.push([parser.attribName, parser.attribValue])\n    } else {\n      // in non-xmlns mode, we can emit the event right away\n      parser.tag.attributes[parser.attribName] = parser.attribValue\n      emitNode(parser, 'onattribute', {\n        name: parser.attribName,\n        value: parser.attribValue\n      })\n    }\n\n    parser.attribName = parser.attribValue = ''\n  }\n\n  function openTag (parser, selfClosing) {\n    if (parser.opt.xmlns) {\n      // emit namespace binding events\n      var tag = parser.tag\n\n      // add namespace info to tag\n      var qn = qname(parser.tagName)\n      tag.prefix = qn.prefix\n      tag.local = qn.local\n      tag.uri = tag.ns[qn.prefix] || ''\n\n      if (tag.prefix && !tag.uri) {\n        strictFail(parser, 'Unbound namespace prefix: ' +\n          JSON.stringify(parser.tagName))\n        tag.uri = qn.prefix\n      }\n\n      var parent = parser.tags[parser.tags.length - 1] || parser\n      if (tag.ns && parent.ns !== tag.ns) {\n        Object.keys(tag.ns).forEach(function (p) {\n          emitNode(parser, 'onopennamespace', {\n            prefix: p,\n            uri: tag.ns[p]\n          })\n        })\n      }\n\n      // handle deferred onattribute events\n      // Note: do not apply default ns to attributes:\n      //   http://www.w3.org/TR/REC-xml-names/#defaulting\n      for (var i = 0, l = parser.attribList.length; i < l; i++) {\n        var nv = parser.attribList[i]\n        var name = nv[0]\n        var value = nv[1]\n        var qualName = qname(name, true)\n        var prefix = qualName.prefix\n        var local = qualName.local\n        var uri = prefix === '' ? '' : (tag.ns[prefix] || '')\n        var a = {\n          name: name,\n          value: value,\n          prefix: prefix,\n          local: local,\n          uri: uri\n        }\n\n        // if there's any attributes with an undefined namespace,\n        // then fail on them now.\n        if (prefix && prefix !== 'xmlns' && !uri) {\n          strictFail(parser, 'Unbound namespace prefix: ' +\n            JSON.stringify(prefix))\n          a.uri = prefix\n        }\n        parser.tag.attributes[name] = a\n        emitNode(parser, 'onattribute', a)\n      }\n      parser.attribList.length = 0\n    }\n\n    parser.tag.isSelfClosing = !!selfClosing\n\n    // process the tag\n    parser.sawRoot = true\n    parser.tags.push(parser.tag)\n    emitNode(parser, 'onopentag', parser.tag)\n    if (!selfClosing) {\n      // special case for <script> in non-strict mode.\n      if (!parser.noscript && parser.tagName.toLowerCase() === 'script') {\n        parser.state = S.SCRIPT\n      } else {\n        parser.state = S.TEXT\n      }\n      parser.tag = null\n      parser.tagName = ''\n    }\n    parser.attribName = parser.attribValue = ''\n    parser.attribList.length = 0\n  }\n\n  function closeTag (parser) {\n    if (!parser.tagName) {\n      strictFail(parser, 'Weird empty close tag.')\n      parser.textNode += '</>'\n      parser.state = S.TEXT\n      return\n    }\n\n    if (parser.script) {\n      if (parser.tagName !== 'script') {\n        parser.script += '</' + parser.tagName + '>'\n        parser.tagName = ''\n        parser.state = S.SCRIPT\n        return\n      }\n      emitNode(parser, 'onscript', parser.script)\n      parser.script = ''\n    }\n\n    // first make sure that the closing tag actually exists.\n    // <a><b></c></b></a> will close everything, otherwise.\n    var t = parser.tags.length\n    var tagName = parser.tagName\n    if (!parser.strict) {\n      tagName = tagName[parser.looseCase]()\n    }\n    var closeTo = tagName\n    while (t--) {\n      var close = parser.tags[t]\n      if (close.name !== closeTo) {\n        // fail the first time in strict mode\n        strictFail(parser, 'Unexpected close tag')\n      } else {\n        break\n      }\n    }\n\n    // didn't find it.  we already failed for strict, so just abort.\n    if (t < 0) {\n      strictFail(parser, 'Unmatched closing tag: ' + parser.tagName)\n      parser.textNode += '</' + parser.tagName + '>'\n      parser.state = S.TEXT\n      return\n    }\n    parser.tagName = tagName\n    var s = parser.tags.length\n    while (s-- > t) {\n      var tag = parser.tag = parser.tags.pop()\n      parser.tagName = parser.tag.name\n      emitNode(parser, 'onclosetag', parser.tagName)\n\n      var x = {}\n      for (var i in tag.ns) {\n        x[i] = tag.ns[i]\n      }\n\n      var parent = parser.tags[parser.tags.length - 1] || parser\n      if (parser.opt.xmlns && tag.ns !== parent.ns) {\n        // remove namespace bindings introduced by tag\n        Object.keys(tag.ns).forEach(function (p) {\n          var n = tag.ns[p]\n          emitNode(parser, 'onclosenamespace', { prefix: p, uri: n })\n        })\n      }\n    }\n    if (t === 0) parser.closedRoot = true\n    parser.tagName = parser.attribValue = parser.attribName = ''\n    parser.attribList.length = 0\n    parser.state = S.TEXT\n  }\n\n  function parseEntity (parser) {\n    var entity = parser.entity\n    var entityLC = entity.toLowerCase()\n    var num\n    var numStr = ''\n\n    if (parser.ENTITIES[entity]) {\n      return parser.ENTITIES[entity]\n    }\n    if (parser.ENTITIES[entityLC]) {\n      return parser.ENTITIES[entityLC]\n    }\n    entity = entityLC\n    if (entity.charAt(0) === '#') {\n      if (entity.charAt(1) === 'x') {\n        entity = entity.slice(2)\n        num = parseInt(entity, 16)\n        numStr = num.toString(16)\n      } else {\n        entity = entity.slice(1)\n        num = parseInt(entity, 10)\n        numStr = num.toString(10)\n      }\n    }\n    entity = entity.replace(/^0+/, '')\n    if (isNaN(num) || numStr.toLowerCase() !== entity) {\n      strictFail(parser, 'Invalid character entity')\n      return '&' + parser.entity + ';'\n    }\n\n    return String.fromCodePoint(num)\n  }\n\n  function beginWhiteSpace (parser, c) {\n    if (c === '<') {\n      parser.state = S.OPEN_WAKA\n      parser.startTagPosition = parser.position\n    } else if (!isWhitespace(c)) {\n      // have to process this as a text node.\n      // weird, but happens.\n      strictFail(parser, 'Non-whitespace before first tag.')\n      parser.textNode = c\n      parser.state = S.TEXT\n    }\n  }\n\n  function charAt (chunk, i) {\n    var result = ''\n    if (i < chunk.length) {\n      result = chunk.charAt(i)\n    }\n    return result\n  }\n\n  function write (chunk) {\n    var parser = this\n    if (this.error) {\n      throw this.error\n    }\n    if (parser.closed) {\n      return error(parser,\n        'Cannot write after close. Assign an onready handler.')\n    }\n    if (chunk === null) {\n      return end(parser)\n    }\n    if (typeof chunk === 'object') {\n      chunk = chunk.toString()\n    }\n    var i = 0\n    var c = ''\n    while (true) {\n      c = charAt(chunk, i++)\n      parser.c = c\n\n      if (!c) {\n        break\n      }\n\n      if (parser.trackPosition) {\n        parser.position++\n        if (c === '\\n') {\n          parser.line++\n          parser.column = 0\n        } else {\n          parser.column++\n        }\n      }\n\n      switch (parser.state) {\n        case S.BEGIN:\n          parser.state = S.BEGIN_WHITESPACE\n          if (c === '\\uFEFF') {\n            continue\n          }\n          beginWhiteSpace(parser, c)\n          continue\n\n        case S.BEGIN_WHITESPACE:\n          beginWhiteSpace(parser, c)\n          continue\n\n        case S.TEXT:\n          if (parser.sawRoot && !parser.closedRoot) {\n            var starti = i - 1\n            while (c && c !== '<' && c !== '&') {\n              c = charAt(chunk, i++)\n              if (c && parser.trackPosition) {\n                parser.position++\n                if (c === '\\n') {\n                  parser.line++\n                  parser.column = 0\n                } else {\n                  parser.column++\n                }\n              }\n            }\n            parser.textNode += chunk.substring(starti, i - 1)\n          }\n          if (c === '<' && !(parser.sawRoot && parser.closedRoot && !parser.strict)) {\n            parser.state = S.OPEN_WAKA\n            parser.startTagPosition = parser.position\n          } else {\n            if (!isWhitespace(c) && (!parser.sawRoot || parser.closedRoot)) {\n              strictFail(parser, 'Text data outside of root node.')\n            }\n            if (c === '&') {\n              parser.state = S.TEXT_ENTITY\n            } else {\n              parser.textNode += c\n            }\n          }\n          continue\n\n        case S.SCRIPT:\n          // only non-strict\n          if (c === '<') {\n            parser.state = S.SCRIPT_ENDING\n          } else {\n            parser.script += c\n          }\n          continue\n\n        case S.SCRIPT_ENDING:\n          if (c === '/') {\n            parser.state = S.CLOSE_TAG\n          } else {\n            parser.script += '<' + c\n            parser.state = S.SCRIPT\n          }\n          continue\n\n        case S.OPEN_WAKA:\n          // either a /, ?, !, or text is coming next.\n          if (c === '!') {\n            parser.state = S.SGML_DECL\n            parser.sgmlDecl = ''\n          } else if (isWhitespace(c)) {\n            // wait for it...\n          } else if (isMatch(nameStart, c)) {\n            parser.state = S.OPEN_TAG\n            parser.tagName = c\n          } else if (c === '/') {\n            parser.state = S.CLOSE_TAG\n            parser.tagName = ''\n          } else if (c === '?') {\n            parser.state = S.PROC_INST\n            parser.procInstName = parser.procInstBody = ''\n          } else {\n            strictFail(parser, 'Unencoded <')\n            // if there was some whitespace, then add that in.\n            if (parser.startTagPosition + 1 < parser.position) {\n              var pad = parser.position - parser.startTagPosition\n              c = new Array(pad).join(' ') + c\n            }\n            parser.textNode += '<' + c\n            parser.state = S.TEXT\n          }\n          continue\n\n        case S.SGML_DECL:\n          if (parser.sgmlDecl + c === '--') {\n            parser.state = S.COMMENT\n            parser.comment = ''\n            parser.sgmlDecl = ''\n            continue;\n          }\n\n          if (parser.doctype && parser.doctype !== true && parser.sgmlDecl) {\n            parser.state = S.DOCTYPE_DTD\n            parser.doctype += '<!' + parser.sgmlDecl + c\n            parser.sgmlDecl = ''\n          } else if ((parser.sgmlDecl + c).toUpperCase() === CDATA) {\n            emitNode(parser, 'onopencdata')\n            parser.state = S.CDATA\n            parser.sgmlDecl = ''\n            parser.cdata = ''\n          } else if ((parser.sgmlDecl + c).toUpperCase() === DOCTYPE) {\n            parser.state = S.DOCTYPE\n            if (parser.doctype || parser.sawRoot) {\n              strictFail(parser,\n                'Inappropriately located doctype declaration')\n            }\n            parser.doctype = ''\n            parser.sgmlDecl = ''\n          } else if (c === '>') {\n            emitNode(parser, 'onsgmldeclaration', parser.sgmlDecl)\n            parser.sgmlDecl = ''\n            parser.state = S.TEXT\n          } else if (isQuote(c)) {\n            parser.state = S.SGML_DECL_QUOTED\n            parser.sgmlDecl += c\n          } else {\n            parser.sgmlDecl += c\n          }\n          continue\n\n        case S.SGML_DECL_QUOTED:\n          if (c === parser.q) {\n            parser.state = S.SGML_DECL\n            parser.q = ''\n          }\n          parser.sgmlDecl += c\n          continue\n\n        case S.DOCTYPE:\n          if (c === '>') {\n            parser.state = S.TEXT\n            emitNode(parser, 'ondoctype', parser.doctype)\n            parser.doctype = true // just remember that we saw it.\n          } else {\n            parser.doctype += c\n            if (c === '[') {\n              parser.state = S.DOCTYPE_DTD\n            } else if (isQuote(c)) {\n              parser.state = S.DOCTYPE_QUOTED\n              parser.q = c\n            }\n          }\n          continue\n\n        case S.DOCTYPE_QUOTED:\n          parser.doctype += c\n          if (c === parser.q) {\n            parser.q = ''\n            parser.state = S.DOCTYPE\n          }\n          continue\n\n        case S.DOCTYPE_DTD:\n          if (c === ']') {\n            parser.doctype += c\n            parser.state = S.DOCTYPE\n          } else if (c === '<') {\n            parser.state = S.OPEN_WAKA\n            parser.startTagPosition = parser.position\n          } else if (isQuote(c)) {\n            parser.doctype += c\n            parser.state = S.DOCTYPE_DTD_QUOTED\n            parser.q = c\n          } else {\n            parser.doctype += c\n          }\n          continue\n\n        case S.DOCTYPE_DTD_QUOTED:\n          parser.doctype += c\n          if (c === parser.q) {\n            parser.state = S.DOCTYPE_DTD\n            parser.q = ''\n          }\n          continue\n\n        case S.COMMENT:\n          if (c === '-') {\n            parser.state = S.COMMENT_ENDING\n          } else {\n            parser.comment += c\n          }\n          continue\n\n        case S.COMMENT_ENDING:\n          if (c === '-') {\n            parser.state = S.COMMENT_ENDED\n            parser.comment = textopts(parser.opt, parser.comment)\n            if (parser.comment) {\n              emitNode(parser, 'oncomment', parser.comment)\n            }\n            parser.comment = ''\n          } else {\n            parser.comment += '-' + c\n            parser.state = S.COMMENT\n          }\n          continue\n\n        case S.COMMENT_ENDED:\n          if (c !== '>') {\n            strictFail(parser, 'Malformed comment')\n            // allow <!-- blah -- bloo --> in non-strict mode,\n            // which is a comment of \" blah -- bloo \"\n            parser.comment += '--' + c\n            parser.state = S.COMMENT\n          } else if (parser.doctype && parser.doctype !== true) {\n            parser.state = S.DOCTYPE_DTD\n          } else {\n            parser.state = S.TEXT\n          }\n          continue\n\n        case S.CDATA:\n          if (c === ']') {\n            parser.state = S.CDATA_ENDING\n          } else {\n            parser.cdata += c\n          }\n          continue\n\n        case S.CDATA_ENDING:\n          if (c === ']') {\n            parser.state = S.CDATA_ENDING_2\n          } else {\n            parser.cdata += ']' + c\n            parser.state = S.CDATA\n          }\n          continue\n\n        case S.CDATA_ENDING_2:\n          if (c === '>') {\n            if (parser.cdata) {\n              emitNode(parser, 'oncdata', parser.cdata)\n            }\n            emitNode(parser, 'onclosecdata')\n            parser.cdata = ''\n            parser.state = S.TEXT\n          } else if (c === ']') {\n            parser.cdata += ']'\n          } else {\n            parser.cdata += ']]' + c\n            parser.state = S.CDATA\n          }\n          continue\n\n        case S.PROC_INST:\n          if (c === '?') {\n            parser.state = S.PROC_INST_ENDING\n          } else if (isWhitespace(c)) {\n            parser.state = S.PROC_INST_BODY\n          } else {\n            parser.procInstName += c\n          }\n          continue\n\n        case S.PROC_INST_BODY:\n          if (!parser.procInstBody && isWhitespace(c)) {\n            continue\n          } else if (c === '?') {\n            parser.state = S.PROC_INST_ENDING\n          } else {\n            parser.procInstBody += c\n          }\n          continue\n\n        case S.PROC_INST_ENDING:\n          if (c === '>') {\n            emitNode(parser, 'onprocessinginstruction', {\n              name: parser.procInstName,\n              body: parser.procInstBody\n            })\n            parser.procInstName = parser.procInstBody = ''\n            parser.state = S.TEXT\n          } else {\n            parser.procInstBody += '?' + c\n            parser.state = S.PROC_INST_BODY\n          }\n          continue\n\n        case S.OPEN_TAG:\n          if (isMatch(nameBody, c)) {\n            parser.tagName += c\n          } else {\n            newTag(parser)\n            if (c === '>') {\n              openTag(parser)\n            } else if (c === '/') {\n              parser.state = S.OPEN_TAG_SLASH\n            } else {\n              if (!isWhitespace(c)) {\n                strictFail(parser, 'Invalid character in tag name')\n              }\n              parser.state = S.ATTRIB\n            }\n          }\n          continue\n\n        case S.OPEN_TAG_SLASH:\n          if (c === '>') {\n            openTag(parser, true)\n            closeTag(parser)\n          } else {\n            strictFail(parser, 'Forward-slash in opening tag not followed by >')\n            parser.state = S.ATTRIB\n          }\n          continue\n\n        case S.ATTRIB:\n          // haven't read the attribute name yet.\n          if (isWhitespace(c)) {\n            continue\n          } else if (c === '>') {\n            openTag(parser)\n          } else if (c === '/') {\n            parser.state = S.OPEN_TAG_SLASH\n          } else if (isMatch(nameStart, c)) {\n            parser.attribName = c\n            parser.attribValue = ''\n            parser.state = S.ATTRIB_NAME\n          } else {\n            strictFail(parser, 'Invalid attribute name')\n          }\n          continue\n\n        case S.ATTRIB_NAME:\n          if (c === '=') {\n            parser.state = S.ATTRIB_VALUE\n          } else if (c === '>') {\n            strictFail(parser, 'Attribute without value')\n            parser.attribValue = parser.attribName\n            attrib(parser)\n            openTag(parser)\n          } else if (isWhitespace(c)) {\n            parser.state = S.ATTRIB_NAME_SAW_WHITE\n          } else if (isMatch(nameBody, c)) {\n            parser.attribName += c\n          } else {\n            strictFail(parser, 'Invalid attribute name')\n          }\n          continue\n\n        case S.ATTRIB_NAME_SAW_WHITE:\n          if (c === '=') {\n            parser.state = S.ATTRIB_VALUE\n          } else if (isWhitespace(c)) {\n            continue\n          } else {\n            strictFail(parser, 'Attribute without value')\n            parser.tag.attributes[parser.attribName] = ''\n            parser.attribValue = ''\n            emitNode(parser, 'onattribute', {\n              name: parser.attribName,\n              value: ''\n            })\n            parser.attribName = ''\n            if (c === '>') {\n              openTag(parser)\n            } else if (isMatch(nameStart, c)) {\n              parser.attribName = c\n              parser.state = S.ATTRIB_NAME\n            } else {\n              strictFail(parser, 'Invalid attribute name')\n              parser.state = S.ATTRIB\n            }\n          }\n          continue\n\n        case S.ATTRIB_VALUE:\n          if (isWhitespace(c)) {\n            continue\n          } else if (isQuote(c)) {\n            parser.q = c\n            parser.state = S.ATTRIB_VALUE_QUOTED\n          } else {\n            if (!parser.opt.unquotedAttributeValues) {\n              error(parser, 'Unquoted attribute value')\n            }\n            parser.state = S.ATTRIB_VALUE_UNQUOTED\n            parser.attribValue = c\n          }\n          continue\n\n        case S.ATTRIB_VALUE_QUOTED:\n          if (c !== parser.q) {\n            if (c === '&') {\n              parser.state = S.ATTRIB_VALUE_ENTITY_Q\n            } else {\n              parser.attribValue += c\n            }\n            continue\n          }\n          attrib(parser)\n          parser.q = ''\n          parser.state = S.ATTRIB_VALUE_CLOSED\n          continue\n\n        case S.ATTRIB_VALUE_CLOSED:\n          if (isWhitespace(c)) {\n            parser.state = S.ATTRIB\n          } else if (c === '>') {\n            openTag(parser)\n          } else if (c === '/') {\n            parser.state = S.OPEN_TAG_SLASH\n          } else if (isMatch(nameStart, c)) {\n            strictFail(parser, 'No whitespace between attributes')\n            parser.attribName = c\n            parser.attribValue = ''\n            parser.state = S.ATTRIB_NAME\n          } else {\n            strictFail(parser, 'Invalid attribute name')\n          }\n          continue\n\n        case S.ATTRIB_VALUE_UNQUOTED:\n          if (!isAttribEnd(c)) {\n            if (c === '&') {\n              parser.state = S.ATTRIB_VALUE_ENTITY_U\n            } else {\n              parser.attribValue += c\n            }\n            continue\n          }\n          attrib(parser)\n          if (c === '>') {\n            openTag(parser)\n          } else {\n            parser.state = S.ATTRIB\n          }\n          continue\n\n        case S.CLOSE_TAG:\n          if (!parser.tagName) {\n            if (isWhitespace(c)) {\n              continue\n            } else if (notMatch(nameStart, c)) {\n              if (parser.script) {\n                parser.script += '</' + c\n                parser.state = S.SCRIPT\n              } else {\n                strictFail(parser, 'Invalid tagname in closing tag.')\n              }\n            } else {\n              parser.tagName = c\n            }\n          } else if (c === '>') {\n            closeTag(parser)\n          } else if (isMatch(nameBody, c)) {\n            parser.tagName += c\n          } else if (parser.script) {\n            parser.script += '</' + parser.tagName\n            parser.tagName = ''\n            parser.state = S.SCRIPT\n          } else {\n            if (!isWhitespace(c)) {\n              strictFail(parser, 'Invalid tagname in closing tag')\n            }\n            parser.state = S.CLOSE_TAG_SAW_WHITE\n          }\n          continue\n\n        case S.CLOSE_TAG_SAW_WHITE:\n          if (isWhitespace(c)) {\n            continue\n          }\n          if (c === '>') {\n            closeTag(parser)\n          } else {\n            strictFail(parser, 'Invalid characters in closing tag')\n          }\n          continue\n\n        case S.TEXT_ENTITY:\n        case S.ATTRIB_VALUE_ENTITY_Q:\n        case S.ATTRIB_VALUE_ENTITY_U:\n          var returnState\n          var buffer\n          switch (parser.state) {\n            case S.TEXT_ENTITY:\n              returnState = S.TEXT\n              buffer = 'textNode'\n              break\n\n            case S.ATTRIB_VALUE_ENTITY_Q:\n              returnState = S.ATTRIB_VALUE_QUOTED\n              buffer = 'attribValue'\n              break\n\n            case S.ATTRIB_VALUE_ENTITY_U:\n              returnState = S.ATTRIB_VALUE_UNQUOTED\n              buffer = 'attribValue'\n              break\n          }\n\n          if (c === ';') {\n            var parsedEntity = parseEntity(parser)\n            if (parser.opt.unparsedEntities && !Object.values(sax.XML_ENTITIES).includes(parsedEntity)) {\n              parser.entity = ''\n              parser.state = returnState\n              parser.write(parsedEntity)\n            } else {\n              parser[buffer] += parsedEntity\n              parser.entity = ''\n              parser.state = returnState\n            }\n          } else if (isMatch(parser.entity.length ? entityBody : entityStart, c)) {\n            parser.entity += c\n          } else {\n            strictFail(parser, 'Invalid character in entity name')\n            parser[buffer] += '&' + parser.entity + c\n            parser.entity = ''\n            parser.state = returnState\n          }\n\n          continue\n\n        default: /* istanbul ignore next */ {\n          throw new Error(parser, 'Unknown state: ' + parser.state)\n        }\n      }\n    } // while\n\n    if (parser.position >= parser.bufferCheckPosition) {\n      checkBufferLength(parser)\n    }\n    return parser\n  }\n\n  /*! http://mths.be/fromcodepoint v0.1.0 by @mathias */\n  /* istanbul ignore next */\n  if (!String.fromCodePoint) {\n    (function () {\n      var stringFromCharCode = String.fromCharCode\n      var floor = Math.floor\n      var fromCodePoint = function () {\n        var MAX_SIZE = 0x4000\n        var codeUnits = []\n        var highSurrogate\n        var lowSurrogate\n        var index = -1\n        var length = arguments.length\n        if (!length) {\n          return ''\n        }\n        var result = ''\n        while (++index < length) {\n          var codePoint = Number(arguments[index])\n          if (\n            !isFinite(codePoint) || // `NaN`, `+Infinity`, or `-Infinity`\n            codePoint < 0 || // not a valid Unicode code point\n            codePoint > 0x10FFFF || // not a valid Unicode code point\n            floor(codePoint) !== codePoint // not an integer\n          ) {\n            throw RangeError('Invalid code point: ' + codePoint)\n          }\n          if (codePoint <= 0xFFFF) { // BMP code point\n            codeUnits.push(codePoint)\n          } else { // Astral code point; split in surrogate halves\n            // http://mathiasbynens.be/notes/javascript-encoding#surrogate-formulae\n            codePoint -= 0x10000\n            highSurrogate = (codePoint >> 10) + 0xD800\n            lowSurrogate = (codePoint % 0x400) + 0xDC00\n            codeUnits.push(highSurrogate, lowSurrogate)\n          }\n          if (index + 1 === length || codeUnits.length > MAX_SIZE) {\n            result += stringFromCharCode.apply(null, codeUnits)\n            codeUnits.length = 0\n          }\n        }\n        return result\n      }\n      /* istanbul ignore next */\n      if (Object.defineProperty) {\n        Object.defineProperty(String, 'fromCodePoint', {\n          value: fromCodePoint,\n          configurable: true,\n          writable: true\n        })\n      } else {\n        String.fromCodePoint = fromCodePoint\n      }\n    }())\n  }\n})( false ? 0 : exports)\n\n\n//# sourceURL=webpack://PhyloIO/./node_modules/sax/lib/sax.js?");
+
+/***/ }),
+
 /***/ "./node_modules/sha.js/hash.js":
 /*!*************************************!*\
   !*** ./node_modules/sha.js/hash.js ***!
@@ -8598,17 +8497,6 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 
 /***/ }),
 
-/***/ "./src/fontawesome-free-6.2.0-web/css/all.css":
-/*!****************************************************!*\
-  !*** ./src/fontawesome-free-6.2.0-web/css/all.css ***!
-  \****************************************************/
-/***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
-
-"use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (__WEBPACK_DEFAULT_EXPORT__)\n/* harmony export */ });\n/* harmony import */ var _node_modules_style_loader_dist_runtime_injectStylesIntoStyleTag_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! !../../../node_modules/style-loader/dist/runtime/injectStylesIntoStyleTag.js */ \"./node_modules/style-loader/dist/runtime/injectStylesIntoStyleTag.js\");\n/* harmony import */ var _node_modules_style_loader_dist_runtime_injectStylesIntoStyleTag_js__WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_style_loader_dist_runtime_injectStylesIntoStyleTag_js__WEBPACK_IMPORTED_MODULE_0__);\n/* harmony import */ var _node_modules_css_loader_dist_cjs_js_all_css__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! !!../../../node_modules/css-loader/dist/cjs.js!./all.css */ \"./node_modules/css-loader/dist/cjs.js!./src/fontawesome-free-6.2.0-web/css/all.css\");\n\n            \n\nvar options = {};\n\noptions.insert = \"head\";\noptions.singleton = false;\n\nvar update = _node_modules_style_loader_dist_runtime_injectStylesIntoStyleTag_js__WEBPACK_IMPORTED_MODULE_0___default()(_node_modules_css_loader_dist_cjs_js_all_css__WEBPACK_IMPORTED_MODULE_1__[\"default\"], options);\n\n\n\n/* harmony default export */ const __WEBPACK_DEFAULT_EXPORT__ = (_node_modules_css_loader_dist_cjs_js_all_css__WEBPACK_IMPORTED_MODULE_1__[\"default\"].locals || {});\n\n//# sourceURL=webpack://PhyloIO/./src/fontawesome-free-6.2.0-web/css/all.css?");
-
-/***/ }),
-
 /***/ "./src/interface.css":
 /*!***************************!*\
   !*** ./src/interface.css ***!
@@ -8670,7 +8558,7 @@ eval("\n/**\n * Module exports.\n */\n\nmodule.exports = deprecate;\n\n/**\n * M
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ API)\n/* harmony export */ });\n/* harmony import */ var _container_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ./container.js */ \"./src/container.js\");\n/* harmony import */ var _color_mapper__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./color_mapper */ \"./src/color_mapper.js\");\n/* harmony import */ var _keyboardManager_js__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./keyboardManager.js */ \"./src/keyboardManager.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_3___default = /*#__PURE__*/__webpack_require__.n(file_saver__WEBPACK_IMPORTED_MODULE_3__);\n/* harmony import */ var _model__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! ./model */ \"./src/model.js\");\n/* harmony import */ var minhashjs__WEBPACK_IMPORTED_MODULE_5__ = __webpack_require__(/*! minhashjs */ \"./node_modules/minhashjs/index.js\");\n\n\nconst {  screen_shot } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\n;\n\n\n\nconst {  prepare_and_run_distance } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\n\n// Main class of phylo.io\nclass API {\n\n    constructor() {\n\n        this.settings = {\n            'phylostratigraphy' : false,\n            'share_phylo': 'https://zoo.vital-it.ch/viewer/',\n            'share_post': 'https://zoo.vital-it.ch/sharing/create/',\n            'share_get': 'https://zoo.vital-it.ch/sharing/load/?session=',\n            'sync_zoom': false,\n            'syncing_zoom': false,\n            'callback_ancestral_genome_redirection' : function(taxid){console.log(taxid)},\n            'callback_stack_redirection' : function(taxid, parent_taxid){console.log(taxid, parent_taxid)},\n        };\n\n        this.set_default_parameters() // Settings that can be reset later on (e.g. switch single to compare mode)\n\n    }\n\n    set_default_parameters(){\n        this.workers = {}\n        this.distance_computed= {}\n        this.containers = {}; // {container id -> Container() }\n        this.bound_container = [] // pair of container used for distance computation\n        this.session_token = null // unique session token for cloud saving\n        this.session_url = null // url for cloud saving\n        this.phylo_embedded = false // phylo.io website mode\n        this.distance = {\n            'RF' : false,\n            \"Euc\": false,\n            \"clade\": false,\n            \"RF_good\" : false,\n            \"RF_left\" : false,\n            \"RF_right\" : false,\n            \"Cl_good\" : false,\n            \"Cl_left\" : false,\n            \"Cl_right\" : false,\n        } //\n\n        let default_settings = {\n            'no_distance_message': true,\n            'compute_distance': false,\n            \"compareMode\" : false, // compare for each pair of tree topological similarity\n        };\n        this.settings = {...this.settings, ...default_settings};\n        this.undoing = false // specify is we are undoing an action to prevent infinite looping\n\n        this.color_scales = {}\n    }\n\n    get_color_scale(name) {\n        if (name in this.color_scales) {\n            return this.color_scales[name]\n        } else {\n            this.color_scales[name] = new _color_mapper__WEBPACK_IMPORTED_MODULE_1__[\"default\"]()\n            return this.color_scales[name]\n        }\n    }\n\n    set_color_scales(color_scales){\n\n\n        for (const [key, value] of Object.entries(color_scales)) {\n\n            var newcs = this.get_color_scale(key)\n            newcs.cpt = value.cpt\n            newcs.scale = value.scale\n            newcs.domain_mapping = value.domain_mapping\n            newcs.update()\n\n            this.color_scales[key] =  newcs\n        }\n\n    }\n\n    // create and return a new container and add it the dict using its div id\n    create_container(container_id){ // container_id -> str\n        let c = new _container_js__WEBPACK_IMPORTED_MODULE_0__[\"default\"](container_id, this);\n        this.containers[container_id] = c;\n\n        if (this.bound_container.length < 2) {this.bound_container.push(c)}\n        return c;\n    }\n\n    // for unit testing only\n    _create_model(data, settings, from_raw_data=true){\n        return new _model__WEBPACK_IMPORTED_MODULE_4__[\"default\"](data, settings, from_raw_data)\n    }\n\n    // start the app by computing required information and starting each container\n    start(recompute=false){\n\n\n        var cs = Object.entries(this.containers)\n\n        for (const [uid, container] of cs) {\n            container.start(true)\n        }\n\n        var con1 = this.bound_container[0]\n        var con2 =  this.bound_container[1]\n\n        if (this.settings.compareMode && con1.models.length > 0 && con2.models.length > 0 ){\n\n            this.stop_worker('topology')\n            this.compute_visible_topology_similarity(recompute)\n\n            for (const [uid, container] of cs) {\n                container.viewer.render(container.viewer.hierarchy);\n                //container.viewer.update_collapse_level(container.models[container.current_model].settings.collapse_level, false)\n            }\n\n            if (this.settings.compute_distance){\n                this.send_worker_distance()\n            }\n\n        }\n\n        new _keyboardManager_js__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this);\n    }\n\n    compute_visible_topology_similarity(recompute=true){\n\n        // If no container selected for comparison, takes first two\n        if (this.bound_container.length < 2){\n\n            let cs = Object.values(this.containers)\n\n            this.bound_container = []\n            this.bound_container.push(cs[0])\n            this.bound_container.push(cs[1])\n        }\n\n        var con1 = this.bound_container[0]\n        var con2 =  this.bound_container[1]\n\n        // check if already computed\n        var todo1 = !(con2.viewer.model.settings.similarity.includes(con1.viewer.model.uid))\n        var todo2 = !(con1.viewer.model.settings.similarity.includes(con2.viewer.model.uid))\n\n\n        if (recompute || todo1 || todo2  ){\n\n            function compute_similarity_container_pair(t1,t2){\n\n                console.time(\"similarity\");\n\n                // X = Intersection of T1 & T2 leaves.\n                if (t1.leaves.length <= 0){\n                    t1.leaves = t1.get_leaves(t1.data)\n                }\n                if (t2.leaves.length <= 0){\n                    t2.leaves = t2.get_leaves(t2.data)\n                }\n                var common_leaves = t1.leaves.map(leaf => leaf.name).filter(value => t2.leaves.map(leaf => leaf.name).includes(value));\n                console.log(\"Intersection\");\n                console.timeLog(\"similarity\");\n\n                // DeepLeaf with filter(X = True)\n                t1.createDeepLeafList(common_leaves)\n                t2.createDeepLeafList(common_leaves)\n                console.log(\"DeepLeaf\");\n                console.timeLog(\"similarity\");\n\n                // MinHash\n                t1.createMinHash()\n                t2.createMinHash()\n                console.log(\"MinHash\");\n                console.timeLog(\"similarity\");\n\n                // For all T1 & T2 Nodes compute the BCN with MinHash\n                var nodes_t1 = []\n                var nodes_t2 = []\n\n                var forest1 = new minhashjs__WEBPACK_IMPORTED_MODULE_5__.MinHashLSHForest.MinHashLSHForest()\n                var forest2 = new minhashjs__WEBPACK_IMPORTED_MODULE_5__.MinHashLSHForest.MinHashLSHForest()\n\n                var cpt =0\n                t1.traverse(t1.data, function(h,children){nodes_t1.push(h);forest1.add(h, h.min_hash);cpt++}, null)\n                t2.traverse(t2.data, function(z,children){nodes_t2.push(z);forest2.add(z, z.min_hash);cpt++}, null)\n\n                forest1.index()\n                forest2.index()\n\n                find_BCN(nodes_t1, forest2, t2.uid)\n                find_BCN(nodes_t2, forest1, t1.uid)\n\n                console.log(\"BCN done\");\n\n                console.timeLog(\"similarity\");\n\n                // Clean non essential datume\n                t1.removeMinHash()\n                t2.removeMinHash()\n\n                console.timeEnd(\"similarity\");\n\n                t1.settings.similarity.push(t2.uid)\n                t2.settings.similarity.push(t1.uid)\n\n\n            }\n\n            function find_BCN(nodes_list, target_forest, target_uid){\n                nodes_list.forEach((node) => {\n\n                    function is_leaf(str) {\n                        return !str.includes(\"||\");\n                    }\n\n                    var matches = target_forest.query(node.min_hash,10)\n\n                    var l = new Set(node.deepLeafList.filter(is_leaf))\n                    if (l.size > 0){\n\n                        var max_jacc = 0\n                        var BCN = null\n\n                        matches.forEach(e => {\n                            var r =   new Set(e.deepLeafList.filter(is_leaf))\n\n                            if (r.size > 0){\n\n\n                                var inter = Array.from(r).filter(x => l.has(x)).length\n                                var union = [...new Set([...l, ...r])].length;\n\n                                var jj = inter/union\n\n\n\n                                if (jj > max_jacc){\n                                    max_jacc = jj\n                                    BCN = e\n                                }\n\n                            }\n\n\n\n\n\n                        })\n\n                        if (max_jacc > 0) {\n                            node.elementS[target_uid] = max_jacc\n                            if (!node.elementBCN){\n                                node.elementBCN = {}\n                            }\n                            node.elementBCN[target_uid] = BCN\n                        }\n\n\n                    }\n\n\n\n\n                })\n            }\n\n\n            var time = parseInt((con1.viewer.model.leaves.length*2 + con2.viewer.model.leaves.length*2) / (40000/150))\n\n            var msg =  `Computing similarity... (~  ${time} seconds)`\n\n            con1.message_loader = msg\n            con1.viewer.interface.update_loader_message()\n\n            con2.message_loader = msg\n            con2.viewer.interface.update_loader_message()\n\n            compute_similarity_container_pair(con1.viewer.model,con2.viewer.model)\n\n            con1.viewer.render(con1.viewer.hierarchy);\n            con2.viewer.render(con2.viewer.hierarchy);\n\n            con1.message_loader = null\n            con1.viewer.interface.update_loader_message()\n\n            con2.message_loader = null\n            con2.viewer.interface.update_loader_message()\n        }\n\n\n    }\n\n    set_distance(m1,m2, distance){\n\n        var tuple_key = [m1.uid, m2.uid].sort().join('---')\n\n        this.distance_computed[tuple_key] = distance\n    }\n\n    get_distance(m1,m2){\n\n        var tuple_key = [m1.uid, m2.uid].sort().join('---')\n\n\n        return this.distance_computed[tuple_key]\n\n    }\n\n    delete_modele_distance(m){\n\n\n        for (var key in this.distance_computed) {\n            if (this.distance_computed.hasOwnProperty(key)) {\n\n                var kd = key.split('---')\n\n                if (kd[0] == m.uid || kd[kd.length -1] == m.uid){\n                    this.distance_computed[key] = undefined\n                }\n\n\n            }\n        }\n\n\n\n    }\n\n    set_worker(key, worker){\n        this.workers[key] = worker\n    }\n\n    stop_worker(key){\n        try {\n            for (const [uid, container] of this.containers) {\n                container.message_loader = null\n            }\n            this.workers[key].terminate();\n        } catch (error) {\n        }\n\n\n    }\n\n    stop_all_workers(){\n        for (const [key, worker] of Object.entries(this.workers)) {\n            worker.terminate();\n        }\n    }\n\n    get_json_pickle(){\n\n        var pickle = {\n            \"containers\" : [],\n            'settings' : this.settings,\n            'color_scales': this.color_scales\n        }\n\n        let cs = Object.values(this.containers)\n\n        for (var i = 0; i < cs.length; i++) {\n\n            let ms = cs[i].models\n\n            let minput = []\n\n            for (var j = 0; j < ms.length; j++) {\n\n                var s = ms[j].settings\n\n                s.labels_array_leaf= [...s.labels['leaf']];\n                s.labels_array_node = [...s.labels['node']];\n\n                s.colorlabels_array_leaf = [...s.colorlabels['leaf']];\n                s.colorlabels_array_node = [...s.colorlabels['node']];\n\n                minput.push({'settings':s, 'data':ms[j].remove_circularity(), 'zoom': ms[j].zoom })\n\n\n            }\n\n            pickle.containers.push({\n                'models' : minput,\n                'settings'  : cs[i].settings,\n                'current_model': cs[i].current_model\n            })\n\n        }\n\n        var string_pickle = JSON.stringify(pickle);\n\n        for (var i = 0; i < cs.length; i++) {\n\n            let ms = cs[i].models\n\n            for (var j = 0; j < ms.length; j++) {\n\n                ms[j].add_circularity_back()\n\n\n            }\n\n        }\n\n        return string_pickle\n\n    }\n\n    save_session(){ // TODO not working since collapse or other info are store in circular data\n\n        var blob = new Blob([this.get_json_pickle()], {type: \"text/plain;charset=utf-8\"});\n        file_saver__WEBPACK_IMPORTED_MODULE_3___default().saveAs(blob, \"Session.phyloio\");\n\n    }\n\n    send_worker_distance(){\n\n        if (!this.settings.compareMode){\n            return\n        }\n\n        var mod1 = this.bound_container[0].models[this.bound_container[0].current_model]\n        var mod2 = this.bound_container[1].models[this.bound_container[1].current_model]\n\n        var distance = this.get_distance(mod1,mod2)\n\n\n        if (typeof distance !== 'undefined') {\n\n            this.distance = distance\n            this.settings.no_distance_message = distance.no_distance_message\n\n            if (this.phylo_embedded){\n                this.display_distance_window()\n            }\n\n            return\n\n        }\n\n\n        var d = prepare_and_run_distance(mod1,mod2 )\n\n        this.set_distance(mod1,mod2,d)\n\n        this.distance = d\n\n        this.settings.no_distance_message = d.no_distance_message\n\n        if (this.phylo_embedded){\n            this.display_distance_window()\n        }\n\n    }\n\n    screen_shot(params){screen_shot(params)}\n\n    generate_share_link(){\n\n        var that = this\n        var xhr = new XMLHttpRequest();\n\n        xhr.onreadystatechange = function () {\n\n            if (this.readyState != 4) return;\n\n            else if (this.status == 201) {\n                var data = JSON.parse(this.responseText);\n\n                if (data.result = 'OK'){\n                    that.session_token = data.session\n                    that.session_url = that.settings.share_phylo + '?session=' + that.session_token\n                }\n            }\n\n            else if (this.status == 413) {\n                that.session_token = 'ERROR_SIZE';\n                return\n            }\n\n            else if (this.status == 400) {\n                return\n            }\n        };\n\n        xhr.open(\"POST\", this.settings.share_post, false);\n\n        xhr.setRequestHeader('Content-Type', 'application/json');\n\n        var j = this.get_json_pickle()\n\n        if (encodeURI(JSON.stringify(j)).split(/%..|./).length - 1 > 500000000){\n            that.session_token = 'ERROR_SIZE';\n            return;\n        }\n\n        xhr.send(j);\n\n}\n\n    get_share_data(session_token, callback=null){\n\n\n        var xhr = new XMLHttpRequest();\n\n        xhr.onreadystatechange = function() {\n            if (xhr.readyState == XMLHttpRequest.DONE) {\n                var j = xhr.responseText;\n                callback.apply(this,[j])\n            }\n        }\n\n        xhr.open('GET', this.settings.share_get + session_token, false);\n        xhr.send(null);\n\n\n\n    }\n\n    display_distance_window(){\n\n\n        function create_html_distance(title, d1, d2, d3, d4, d5, d6, d7){\n\n            return `<li class=\"list-group-item d-flex justify-content-between align-items-start\">\n                        <div class=\"ms-2 me-auto\">\n                        <div class=\"fw-bold\" style=\"text-align:left;\">${title}</div>\n                        \n                        <span style=\"display: flex\"><small>Left tree: ${d1}/${d2} (${d3}%) </small> </span>\n                        <span style=\"display: flex\"><small>Right tree: ${d4}/${d5} (${d6}%) </small> </span>\n                        \n                       \n                        </div>\n                         <span class=\"badge bg-primary rounded-pill\">${d7}</span>  \n                        </li>`\n        }\n\n\n\n        var bool_distance_computed = (this.distance.RF !== false || this.distance.Euc !== false  || this.distance.clade !== false || this.settings.no_distance_message !== true   )\n        document.getElementById(\"distance_window\").style.display  = (this.settings.compareMode && bool_distance_computed ) ?  'block': 'none';\n\n        var divdiv = document.getElementById(\"mydivbody\");\n\n        divdiv.innerHTML = \"<ol class=\\\"list-group \\\">\\n\"\n\n\n\n\n        if (this.distance.RF !== false) {\n\n            divdiv.innerHTML += create_html_distance('Robinson-Foulds',\n                this.distance.RF_good, this.distance.RF_left,\n                Math.round(this.distance.RF_good /this.distance.RF_left*100),this.distance.RF_good, this.distance.RF_right,\n                Math.round(this.distance.RF_good /this.distance.RF_right*100),this.distance.RF\n            )\n\n\n\n\n        }\n\n        if (this.distance.clade !== false) {\n\n            divdiv.innerHTML += create_html_distance('Clade',this.distance.Cl_good, this.distance.Cl_left, Math.round(this.distance.Cl_good /this.distance.Cl_left*100),\n                this.distance.Cl_good, this.distance.Cl_right, Math.round(this.distance.Cl_good/this.distance.Cl_right*100), this.distance.clade\n            )\n\n        }\n\n\n        if (this.distance.Euc !== false) {\n\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\">Euclidian</div> </div>\\n\" +\n                \"    <span class=\\\"badge bg-primary rounded-pill\\\">{}</span>\\n\".format(this.distance.Euc) +\n                \"  </li>\"\n        }\n\n\n        if (this.distance.LRF !== false) {\n\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\">Labeled RF</div> </div>\\n\" +\n                \"    <span class=\\\"badge bg-primary rounded-pill\\\">{}</span>\\n\".format(this.distance.LRF) +\n                \"  </li>\"\n        }\n\n\n\n        if (this.settings.no_distance_message != true) {\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\"><strong>Warning:</strong> {}</div> </div>\\n\".format(this.settings.no_distance_message)\n                \"  </li>\"\n        }\n\n        divdiv.innerHTML +=   \"</ol>\"\n\n\n    }\n\n}\n\n\n//# sourceURL=webpack://PhyloIO/./src/api.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ API)\n/* harmony export */ });\n/* harmony import */ var _container_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ./container.js */ \"./src/container.js\");\n/* harmony import */ var _color_mapper__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./color_mapper */ \"./src/color_mapper.js\");\n/* harmony import */ var _keyboardManager_js__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./keyboardManager.js */ \"./src/keyboardManager.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_3___default = /*#__PURE__*/__webpack_require__.n(file_saver__WEBPACK_IMPORTED_MODULE_3__);\n/* harmony import */ var _model__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! ./model */ \"./src/model.js\");\n\n\nconst {  screen_shot } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\n;\n\n\n\n// Main class of phylo.io\nclass API {\n\n    constructor() {\n\n        this.settings = {\n            'version' : 1,\n            'phylostratigraphy' : false,\n            'share_phylo': ' https://beta.phylo.io/viewer/',\n            'share_post': ' https://beta.phylo.io/sharing/create/',\n            'share_get': ' https://beta.phylo.io/sharing/load/?session=',\n            'sync_zoom': false,\n            'syncing_zoom': false,\n            'callback_ancestral_genome_redirection' : function(taxid){console.log(taxid)},\n            'callback_stack_redirection' : function(taxid, parent_taxid){console.log(taxid, parent_taxid)},\n        };\n\n        this.set_default_parameters() // Settings that can be reset later on (e.g. switch single to compare mode)\n\n    }\n\n    // HELP\n\n    add_help_modal(container_id){\n\n\n        var mod_html = `\n         <div class=\"modal\" id=\"modal_help\" tabindex=\"-1\" style=\"z-index: 2147483647 !important;\">\n        <div class=\"modal-dialog modal-dialog-centered modal-xl\">\n            <div class=\"modal-content\">\n                <div class=\"modal-header\">\n                    <h5 class=\"modal-title\">Phylo.io help center</h5>\n                    <button type=\"button\" class=\"btn-close\" data-bs-dismiss=\"modal\" aria-label=\"Close\"></button>\n                </div>\n                <div class=\"modal-body\">\n                    Help section is under construction\n                </div>\n                <div class=\"modal-footer\">\n                    <button type=\"button\"  class=\"btn btn-primary\" data-bs-dismiss=\"modal\">Close</button>\n                </div>\n            </div>\n        </div>\n    </div>`\n\n        document.getElementById(container_id).insertAdjacentHTML('afterend',mod_html)\n\n    }\n\n    set_default_parameters(){\n        this.workers = {}\n        this.distance_computed= {}\n        this.containers = {}; // {container id -> Container() }\n        this.bound_container = [] // pair of container used for distance computation\n        this.session_token = null // unique session token for cloud saving\n        this.session_url = null // url for cloud saving\n        this.session_answer = null; // data from reply when generating session\n        this.phylo_embedded = false // phylo.io website mode\n        this.distance = {\n            'RF' : false,\n            \"Euc\": false,\n            \"clade\": false,\n            \"RF_good\" : false,\n            \"RF_left\" : false,\n            \"RF_right\" : false,\n            \"Cl_good\" : false,\n            \"Cl_left\" : false,\n            \"Cl_right\" : false,\n        } //\n\n        let default_settings = {\n            'no_distance_message': true,\n            'compute_distance': false,\n            \"compareMode\" : false, // compare for each pair of tree topological similarity\n        };\n        this.settings = {...this.settings, ...default_settings};\n        this.undoing = false // specify is we are undoing an action to prevent infinite looping\n\n        this.color_scales = {}\n    }\n\n    get_color_scale(name) {\n        if (name in this.color_scales) {\n            return this.color_scales[name]\n        } else {\n            this.color_scales[name] = new _color_mapper__WEBPACK_IMPORTED_MODULE_1__[\"default\"]()\n            return this.color_scales[name]\n        }\n    }\n\n    set_color_scales(color_scales){\n\n\n        for (const [key, value] of Object.entries(color_scales)) {\n\n            var newcs = this.get_color_scale(key)\n            newcs.cpt = value.cpt\n            newcs.scale = value.scale\n            newcs.domain_mapping = value.domain_mapping\n            newcs.update()\n\n            this.color_scales[key] =  newcs\n        }\n\n    }\n\n    // create and return a new container and add it the dict using its div id\n    create_container(container_id){ // container_id -> str\n        let c = new _container_js__WEBPACK_IMPORTED_MODULE_0__[\"default\"](container_id, this);\n        this.containers[container_id] = c;\n\n        if (this.bound_container.length < 2) {this.bound_container.push(c)}\n\n        if (Object.keys(this.containers).length == 1){\n            this.add_help_modal(container_id);\n        }\n\n        return c;\n    }\n\n    // for unit testing only\n    _create_model(data, settings, from_raw_data=true){\n        return new _model__WEBPACK_IMPORTED_MODULE_4__[\"default\"](data, settings, from_raw_data)\n    }\n\n    // start the app by computing required information and starting each container\n    start(recompute=false){\n\n\n        var cs = Object.entries(this.containers)\n\n        for (const [uid, container] of cs) {\n            container.start(true)\n        }\n\n        var con1 = this.bound_container[0]\n        var con2 =  this.bound_container[1]\n\n        if (this.settings.compareMode && con1.models.length > 0 && con2.models.length > 0 ){\n\n            this.stop_worker('topology')\n            this.compute_visible_topology_similarity(recompute)\n\n            for (const [uid, container] of cs) {\n                container.viewer.render(container.viewer.hierarchy);\n                //container.viewer.update_collapse_level(container.models[container.current_model].settings.collapse_level, false)\n            }\n\n            if (this.settings.compute_distance){\n                this.send_worker_distance()\n            }\n\n        }\n\n        new _keyboardManager_js__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this);\n    }\n\n    compute_visible_topology_similarity(recompute=true){\n\n        // If no container selected for comparison, takes first two\n        if (this.bound_container.length < 2){\n\n            let cs = Object.values(this.containers)\n\n            this.bound_container = []\n            this.bound_container.push(cs[0])\n            this.bound_container.push(cs[1])\n        }\n\n        var con1 = this.bound_container[0]\n        var con2 =  this.bound_container[1]\n\n        // check if already computed\n        var todo1 = !(con2.viewer.model.settings.similarity.includes(con1.viewer.model.uid))\n        var todo2 = !(con1.viewer.model.settings.similarity.includes(con2.viewer.model.uid))\n\n\n        if (recompute || todo1 || todo2  ){\n\n            var worker_comp = new Worker(new URL(/* worker import */ __webpack_require__.p + __webpack_require__.u(\"src_worker_bcn_js\"), __webpack_require__.b));\n\n\n            worker_comp.onmessage = function(e) {\n\n                var new_model1 = new _model__WEBPACK_IMPORTED_MODULE_4__[\"default\"](e.data[0].data, e.data[0].settings, false)\n                new_model1.add_circularity_back()\n                con1.replace_model(con1.viewer.model,new_model1)\n                con1.viewer.model = new_model1\n\n                con1.viewer.set_data(con1.viewer.model)\n                con1.viewer.render(con1.viewer.hierarchy);\n\n\n                var new_model2 = new _model__WEBPACK_IMPORTED_MODULE_4__[\"default\"](e.data[1].data, e.data[1].settings, false)\n                new_model2.add_circularity_back()\n                con2.replace_model(con2.viewer.model,new_model2)\n                con2.viewer.model = new_model2\n                con2.viewer.set_data(con2.viewer.model)\n                con2.viewer.render(con2.viewer.hierarchy);\n\n\n                con1.message_loader = null\n                con1.viewer.interface.update_loader_message()\n\n                con2.message_loader = null\n                con2.viewer.interface.update_loader_message()\n\n                con1.viewer.model.set_all_color_scale();\n                con2.viewer.model.set_all_color_scale();\n\n            }\n\n            var datum = {'tree1':con1.viewer.model, 'tree2':con2.viewer.model}\n\n            this.set_worker('topology',worker_comp)\n\n            var time = parseInt((con1.viewer.model.leaves.length*2 + con2.viewer.model.leaves.length*2) / (40000/150))\n\n            var msg =  `Computing similarity... (~  ${time} seconds)`\n\n            con1.message_loader = msg\n            con1.viewer.interface.update_loader_message()\n\n            con2.message_loader = msg\n            con2.viewer.interface.update_loader_message()\n\n            datum.tree1.remove_all_color_scale()\n            datum.tree2.remove_all_color_scale()\n\n            worker_comp.postMessage(datum);\n        }\n\n\n    }\n\n    set_distance(m1,m2, distance){\n\n        var tuple_key = [m1.uid, m2.uid].sort().join('---')\n\n        this.distance_computed[tuple_key] = distance\n    }\n\n    get_distance(m1,m2){\n\n        var tuple_key = [m1.uid, m2.uid].sort().join('---')\n\n\n        return this.distance_computed[tuple_key]\n\n    }\n\n    delete_modele_distance(m){\n\n\n        for (var key in this.distance_computed) {\n            if (this.distance_computed.hasOwnProperty(key)) {\n\n                var kd = key.split('---')\n\n                if (kd[0] == m.uid || kd[kd.length -1] == m.uid){\n                    this.distance_computed[key] = undefined\n                }\n\n\n            }\n        }\n\n\n\n    }\n\n    set_worker(key, worker){\n        this.workers[key] = worker\n    }\n\n    stop_worker(key){\n        try {\n            for (const [uid, container] of this.containers) {\n                container.message_loader = null\n            }\n            this.workers[key].terminate();\n        } catch (error) {\n        }\n\n\n    }\n\n    stop_all_workers(){\n        for (const [key, worker] of Object.entries(this.workers)) {\n            worker.terminate();\n        }\n    }\n\n    get_json_pickle(){\n\n        var pickle = {\n            \"containers\" : [],\n            'settings' : this.settings,\n            'color_scales': this.color_scales\n        }\n\n        let cs = Object.values(this.containers)\n\n        for (var i = 0; i < cs.length; i++) {\n\n            let ms = cs[i].models\n\n            let minput = []\n\n            for (var j = 0; j < ms.length; j++) {\n\n                var s = ms[j].settings\n\n                s.labels_array_leaf= [...s.labels['leaf']];\n                s.labels_array_node = [...s.labels['node']];\n\n                s.colorlabels_array_leaf = [...s.colorlabels['leaf']];\n                s.colorlabels_array_node = [...s.colorlabels['node']];\n\n                minput.push({'settings':s, 'data':ms[j].remove_circularity(), 'zoom': ms[j].zoom })\n\n\n            }\n\n            pickle.containers.push({\n                'models' : minput,\n                'settings'  : cs[i].settings,\n                'current_model': cs[i].current_model\n            })\n\n        }\n\n        var string_pickle = JSON.stringify(pickle);\n\n        for (var i = 0; i < cs.length; i++) {\n\n            let ms = cs[i].models\n\n            for (var j = 0; j < ms.length; j++) {\n\n                ms[j].add_circularity_back()\n\n\n            }\n\n        }\n\n        return string_pickle\n\n    }\n\n    save_session(){ // TODO not working since collapse or other info are store in circular data\n\n        var blob = new Blob([this.get_json_pickle()], {type: \"text/plain;charset=utf-8\"});\n        file_saver__WEBPACK_IMPORTED_MODULE_3___default().saveAs(blob, \"Session.phyloio\");\n\n    }\n\n    send_worker_distance(){\n\n        if (!this.settings.compareMode){\n            return\n        }\n\n        var mod1 = this.bound_container[0].models[this.bound_container[0].current_model]\n        var mod2 = this.bound_container[1].models[this.bound_container[1].current_model]\n\n        var distance = this.get_distance(mod1,mod2)\n\n\n        if (typeof distance !== 'undefined') {\n\n            this.distance = distance\n            this.settings.no_distance_message = distance.no_distance_message\n\n            if (this.phylo_embedded){\n                this.display_distance_window()\n            }\n\n            return\n\n        }\n\n        var worker_distance = new Worker(new URL(/* worker import */ __webpack_require__.p + __webpack_require__.u(\"src_worker_distance_js\"), __webpack_require__.b));\n\n        worker_distance.onmessage = (e) => {\n\n            mod2.set_all_color_scale();\n            mod1.set_all_color_scale();\n\n\n            this.set_distance(mod1,mod2,e.data)\n\n            this.distance = e.data\n\n            this.settings.no_distance_message = e.data.no_distance_message\n\n            if (this.phylo_embedded){\n                this.display_distance_window()\n            }\n        }\n\n        this.set_worker('distance',worker_distance)\n\n        var datum ={'mod1':mod1, 'mod2':mod2}\n\n        datum.mod1.remove_all_color_scale()\n        datum.mod2.remove_all_color_scale()\n\n\n        worker_distance.postMessage(datum);\n\n    }\n\n    screen_shot(params){screen_shot(params)}\n\n    generate_share_link(callback){\n\n        var that = this\n        var xhr = new XMLHttpRequest();\n\n        xhr.onreadystatechange = function () {\n\n            if (this.readyState != 4) return;\n\n            else if (this.status == 201) {\n                let data = JSON.parse(this.responseText);\n                that.session_answer = data;\n                if (data.result === 'OK'){\n                    that.token = data.session;\n                    that.session_url = that.settings.share_phylo + '?session=' + data.session;\n                }\n            }\n\n            else if (this.status == 413) {\n                let data = JSON.parse(this.responseText);\n                that.session_url = 'ERROR_SIZE';\n                that.session_answer = data;\n            }\n\n            else if (this.status == 400) {\n                let data = JSON.parse(this.responseText) | {result: \"Error\", message: \"The server does not accept this session data\"};\n                that.session_answer = data\n                that.session_url = \"\"\n            }\n            else {\n                that.session_answer = {result: \"Error\", message: \"The server is currently not available.\"}\n                that.session_url = \"\"\n            }\n            callback(that)\n        };\n\n        xhr.open(\"POST\", this.settings.share_post, false);\n\n        xhr.setRequestHeader('Content-Type', 'application/json');\n\n        var j = this.get_json_pickle()\n\n        if (encodeURI(JSON.stringify(j)).split(/%..|./).length - 1 > 500000000){\n            that.session_token = 'ERROR_SIZE';\n            return;\n        }\n\n        xhr.send(j);\n\n}\n\n    get_share_data(session_token, callback=null){\n\n\n        var xhr = new XMLHttpRequest();\n\n        xhr.onreadystatechange = function() {\n            if (xhr.readyState == XMLHttpRequest.DONE) {\n                var j = xhr.responseText;\n                callback.apply(this,[j])\n            }\n        }\n\n        xhr.open('GET', this.settings.share_get + session_token, false);\n        xhr.send(null);\n\n\n\n    }\n\n    display_distance_window(){\n\n\n        function create_html_distance(title, d1, d2, d3, d4, d5, d6, d7){\n\n            return `<li class=\"list-group-item d-flex justify-content-between align-items-start\">\n                        <div class=\"ms-2 me-auto\">\n                        <div class=\"fw-bold\" style=\"text-align:left;\">${title}</div>\n                        \n                        <span style=\"display: flex\"><small>Left tree: ${d1}/${d2} (${d3}%) </small> </span>\n                        <span style=\"display: flex\"><small>Right tree: ${d4}/${d5} (${d6}%) </small> </span>\n                        \n                       \n                        </div>\n                         <span class=\"badge bg-primary rounded-pill\">${d7}</span>  \n                        </li>`\n        }\n\n\n\n        var bool_distance_computed = (this.distance.RF !== false || this.distance.Euc !== false  || this.distance.clade !== false || this.settings.no_distance_message !== true   )\n        document.getElementById(\"distance_window\").style.display  = (this.settings.compareMode && bool_distance_computed ) ?  'block': 'none';\n\n        var divdiv = document.getElementById(\"mydivbody\");\n\n        divdiv.innerHTML = \"<ol class=\\\"list-group \\\">\\n\"\n\n\n\n\n        if (this.distance.RF !== false) {\n\n            divdiv.innerHTML += create_html_distance('Robinson-Foulds',\n                this.distance.RF_good, this.distance.RF_left,\n                Math.round(this.distance.RF_good /this.distance.RF_left*100),this.distance.RF_good, this.distance.RF_right,\n                Math.round(this.distance.RF_good /this.distance.RF_right*100),this.distance.RF\n            )\n\n\n\n\n        }\n\n        if (this.distance.clade !== false) {\n\n            divdiv.innerHTML += create_html_distance('Clade',this.distance.Cl_good, this.distance.Cl_left, Math.round(this.distance.Cl_good /this.distance.Cl_left*100),\n                this.distance.Cl_good, this.distance.Cl_right, Math.round(this.distance.Cl_good/this.distance.Cl_right*100), this.distance.clade\n            )\n\n        }\n\n\n        if (this.distance.Euc !== false) {\n\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\">Euclidian</div> </div>\\n\" +\n                \"    <span class=\\\"badge bg-primary rounded-pill\\\">{}</span>\\n\".format(this.distance.Euc) +\n                \"  </li>\"\n        }\n\n\n        if (this.distance.LRF !== false) {\n\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\">Labeled RF</div> </div>\\n\" +\n                \"    <span class=\\\"badge bg-primary rounded-pill\\\">{}</span>\\n\".format(this.distance.LRF) +\n                \"  </li>\"\n        }\n\n\n\n        if (this.settings.no_distance_message != true) {\n            divdiv.innerHTML += \"<li class=\\\"list-group-item d-flex justify-content-between align-items-start\\\">\\n\" +\n                \"    <div class=\\\"ms-2 me-auto\\\">\\n\" +\n                \"      <div class=\\\"fw-bold\\\" style=\\\"text-align:left;\\\"><strong>Warning:</strong> {}</div> </div>\\n\".format(this.settings.no_distance_message)\n                \"  </li>\"\n        }\n\n        divdiv.innerHTML +=   \"</ol>\"\n\n\n    }\n\n}\n\n\n//# sourceURL=webpack://PhyloIO/./src/api.js?");
 
 /***/ }),
 
@@ -8681,7 +8569,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Color_mapper)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\n\n\nclass Color_mapper {\n\n    constructor() {\n\n        this.cpt = 1\n\n        this.scale = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear()\n            .domain([0, this.cpt/2, this.cpt])\n            .range([\"red\", \"green\", \"blue\"])\n\n        this.domain_mapping = {}\n\n    }\n\n    get_color(val){\n        return this.scale(this.domain_mapping[val])\n    }\n\n    add_value_to_map(val){\n        if (!(val in this.domain_mapping)) {\n            this.domain_mapping[val] = this.cpt\n            this.cpt++\n        }\n    }\n\n    update(){\n        this.scale = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear()\n            .domain([0, this.cpt/2, this.cpt])\n            .range([\"red\", \"green\", \"blue\"])\n    }\n\n}\n\n//# sourceURL=webpack://PhyloIO/./src/color_mapper.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Color_mapper)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\n\n\nclass Color_mapper {\n\n    constructor() {\n\n        this.cpt = 1\n\n        this.scheme = d3__WEBPACK_IMPORTED_MODULE_0__.scaleSequential(d3__WEBPACK_IMPORTED_MODULE_0__.interpolateRainbow)\n        this.scheme_name = 'Viridis'\n\n        this.scale = this.scheme\n            .domain([0, this.cpt/2, this.cpt])\n\n        this.domain_mapping = {}\n\n    }\n\n    get_color(val){\n        return this.scale(this.domain_mapping[val])\n    }\n\n    add_value_to_map(val){\n        if (!(val in this.domain_mapping)) {\n            this.domain_mapping[val] = this.cpt\n            this.cpt++\n        }\n    }\n\n    update_scheme(val, name){\n        this.scheme = val\n        this.scheme_name = name\n    }\n\n    update(){\n        this.scale = d3__WEBPACK_IMPORTED_MODULE_0__.scaleSequential(this.scheme).domain([0, this.cpt/2, this.cpt])\n\n    }\n\n}\n\n//# sourceURL=webpack://PhyloIO/./src/color_mapper.js?");
 
 /***/ }),
 
@@ -8692,7 +8580,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Container)\n/* harmony export */ });\n/* harmony import */ var _viewer_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ./viewer.js */ \"./src/viewer.js\");\n/* harmony import */ var _model_js__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./model.js */ \"./src/model.js\");\n/* harmony import */ var _interface__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./interface */ \"./src/interface.js\");\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\n\n\n\n\nconst { build_table, save_file_as } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\nvar parser = __webpack_require__(/*! biojs-io-newick */ \"./node_modules/biojs-io-newick/src/index.js\");\n\n\nvar uid_container = 0 // unique id generator is bound to a single Container()\n\n// Object that bind a div with a d3 Viewer() and one or multiple Model()\nclass Container {\n    get uid() {\n        return this._uid;\n    }\n\n    constructor(container_id, api) {\n\n        this._uid = uid_container++; // unique container id\n        this.div_id = container_id; // related div id\n        this.models = []; // list of Model()\n        this.settings = {}; // per container settings\n        this.current_model = 0; // current model index\n        this.viewer = new _viewer_js__WEBPACK_IMPORTED_MODULE_0__[\"default\"](this); // attach Viewer()\n        this.history_actions = [] //  for Undo feature\n        this.api = api\n        this.message_loader = null\n\n    }\n\n    replace_model(old_model,new_model){\n        var index = this.models.indexOf(old_model);\n\n        if (~index) {\n            this.models[index] = new_model;\n        }\n\n    }\n\n    add_action(name, fn_object, counter_fn, argu, refresh_interface){\n\n        var refresh_interface = (typeof refresh_interface !== 'undefined') ? refresh_interface : false;\n\n        if (!this.api.undoing){\n            this.history_actions.push({'name': name, 'fonct':counter_fn, 'fonction_obj':fn_object, 'argu': argu, 'refresh_interface' : refresh_interface})\n        }\n\n    }\n\n    get_last_action(){\n        return this.history_actions[this.history_actions.length-1]\n    }\n\n    pop_last_action(){\n        return this.history_actions.pop()\n    }\n\n    // create and add Model() configure with params\n    add_tree(data, settings, from_raw_data=true){\n        this.models.push(new _model_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](data, settings, from_raw_data))\n    }\n\n    remove_all_trees(){\n        this.models = []\n    }\n\n    remove_current_tree(apply_change_UI){\n\n        var apply_change_UI = (typeof apply_change_UI !== 'undefined') ? apply_change_UI : false;\n\n        var current_model = this.models[this.current_model]\n\n        const index = this.models.indexOf(current_model);\n        if (index > -1) {\n            this.models.splice(index, 1);\n\n            if (this.current_model > this.models.length -1){\n                console.log('out of index - recalibrating');\n                this.current_model -= 1\n\n            }\n\n            if (apply_change_UI){\n                if (this.models.length == 0){\n\n                    this.current_model = 0\n\n                    this.viewer.remove_data()\n                    this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this, true)\n                }\n                else{\n                    this.shift_model(0, false)\n                }\n            }\n\n        }\n\n\n\n\n    }\n\n    // update the data viewer and render it\n    start(rendering){\n\n\n        if (this.models.length <= 0){\n            this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this, true)\n            return\n        }\n\n        var rendering = (typeof rendering !== 'undefined') ? rendering : false; // todo inverted ??\n\n        this.viewer.set_data(this.models[this.current_model]);\n\n        if (rendering){\n\n            var z = this.models[this.current_model].zoom\n\n\n            if (z) {\n                this.viewer.set_zoom(z.k, z.x, z.y)\n            }\n\n            this.viewer.render(this.viewer.hierarchy);\n            //this.viewer.update_collapse_level(this.models[this.current_model].settings.collapse_level)\n\n\n\n        }\n\n        //this.viewer.zoom_by(0.4) #STACK\n        //this.viewer.render(this.viewer.hierarchy); #STACK\n\n    }\n\n    // shift the pointer (if possible) in the model list and update viewer model\n    shift_model(offset, store_old) {\n\n\n        var store_old = (typeof store_old !== 'undefined') ? store_old : true;\n\n\n        if (this.current_model + offset >= 0 && this.current_model + offset <= this.models.length -1 ) {\n\n            this.add_action('Change tree',  this, this.shift_model, [-offset, store_old] )\n\n            if (store_old){\n                // store the current zoom information\n                var old_m = this.models[this.current_model]\n                old_m.store_zoomTransform(this.viewer.d3.zoomTransform(this.viewer.svg.node()))\n            }\n\n            // update new model data to viewer\n            this.current_model += offset;\n            var m = this.models[this.current_model]\n\n\n\n            this.viewer.set_data(m)\n\n\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(false)\n\n            // apply if any stored zoom information\n            var z = m.zoom\n            if (z) {\n                this.viewer.set_zoom(z.k, z.x, z.y)\n\n            }\n\n            this.viewer.render(this.viewer.hierarchy)\n\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.send_worker_distance()\n            }\n\n\n\n\n        }\n\n    }\n\n    // send action trigger to model, update the data/build d3 data & render the viewer\n    trigger_(action, data, node){\n\n        var m = this.models[this.current_model];\n\n        if (action === 'collapse') {\n            this.add_action('Collapse',  this, this.trigger_, [action, data, node] )\n            m.collapse(data)\n            this.viewer.apply_collapse_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'collapseAll') {\n            this.add_action('Collapse All',  this, this.trigger_, ['expandAll', data, node] )\n            m.collapseAll(data, true)\n            this.viewer.apply_collapseAll_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'expandAll') {\n            this.add_action('Expand All',  this, this.trigger_, ['collapseAll', data, node] )\n            m.collapseAll(data, false)\n            this.viewer.apply_expandAll_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'swap') {\n            this.add_action('Swap',  this, this.trigger_, ['unswap', data, node] )\n            m.swap_subtrees(data)\n            this.viewer.apply_swap_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n\n        }\n        else if (action === 'unswap') {\n            m.unswap_subtrees(data)\n            this.viewer.apply_unswap_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n\n        }\n        else if (action === 'reroot'){\n\n            this.add_action('Reroot',  this, this.trigger_, ['reroot', this.viewer.hierarchy.children[0].data, null] )\n            m.reroot(data)\n            m.rooted = true\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n            this.viewer.render(this.viewer.hierarchy)\n\n        }\n        else if (action === 'trim'){\n            var untrim_data = m.trim(data.data)\n            this.add_action('Trim',  this, this.trigger_, ['untrim', untrim_data, null] )\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n            this.viewer.render(this.viewer.hierarchy)\n        }\n        else if (action === 'untrim'){\n            m.untrim(data.parent, data.floating, data.child, data.index, data.root_mode)\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n            this.viewer.render(this.viewer.hierarchy)\n        }\n\n    }\n\n    // collapse all node from depth todo create collapse/colllapse all function\n    collapse_depth(depth, tree){\n\n        var f\n\n        var model =  this.models[this.current_model];\n        var viewer = this.viewer;\n\n\n        if (depth == 0 ){\n\n            f = function(n,c) {\n                model.collapse(n.data, false)\n                viewer.apply_collapse_from_data_to_d3(n.data, n)\n            }\n        }\n        else {\n            f = function(n,c){\n\n                if (n.depth >= depth  ){\n\n                    model.collapse(n.data, true)\n\n                }\n                else{\n                    model.collapse(n.data, false)\n                }\n\n                viewer.apply_collapse_from_data_to_d3(n.data, n)\n            }\n        }\n\n        this.models[this.current_model].traverse_hierarchy(this.viewer.hierarchy,  f )\n\n\n\n    }\n\n    zoom_to_node(name){\n\n        if (name === ''){return}\n\n\n        if(this.viewer.model.settings.multiple_search != true) {\n\n            this.viewer.hierarchy.each(function (d) {\n                d.data.search_path = false;\n                d.data.search_node = false;\n            })\n        }\n\n\n       function searchTree(obj,search,path){\n           if(obj.data.name === search){ //if search is found return, add the object to the path and return it\n\n               path.push(obj);\n               return path;\n           }\n           else if(obj.children || obj._children){ //if children are collapsed d3 object will have them instantiated as _children\n               var children = (obj.children) ? obj.children : obj._children;\n               for(var i=0;i<children.length;i++){\n                   path.push(obj);// we assume this path is the right one\n                   var found = searchTree(children[i],search,path);\n                   if(found){// we were right, this should return the bubbled-up path from the first if statement\n                       return found;\n                   }\n                   else{//we were wrong, remove this parent from the path and continue iterating\n                       path.pop();\n                   }\n               }\n           }\n           else{//not the right object, return false so it will continue to iterate in the loop\n               return false;\n           }\n       }\n\n\n       var p = searchTree(this.viewer.hierarchy, name, [])\n\n\n\n       for(var i=1;i<p.length;i++){ // 1 is for skipping the root\n\n           this.models[this.current_model].collapse(p[i].data, false)\n           this.viewer.apply_collapse_from_data_to_d3(p[i].data, p[i])\n           p[i].data.search_path = true;\n\n\n       }\n\n       p[p.length-1].data.search_node = true;\n\n       this.viewer.set_data(this.models[this.current_model])\n       this.viewer.render(this.viewer.hierarchy)\n       var n= []\n       this.viewer.hierarchy.each(function(d) { if (d.data.name === name){n.push(d)}})\n\n        this.viewer.centerNode(n[0])\n\n\n    }\n\n    toggle_rooting(){\n        this.models[this.current_model].rooted = !this.models[this.current_model].rooted\n        this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this)\n        this.viewer.render(this.viewer.hierarchy)\n\n        if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n            this.api.delete_modele_distance(m)\n            this.api.send_worker_distance()\n        }\n\n    }\n\n    toggle_stack(){\n\n        var ms = this.models[this.current_model].settings\n\n        if (ms.has_histogram_data){\n\n            ms.show_histogram = !ms.show_histogram;\n            this.viewer.set_data(this.models[this.current_model])\n            this.viewer.render(this.viewer.hierarchy)\n\n        }\n\n\n\n    }\n\n    // INTERFACE CONTROL\n\n    modify_node_size_percent(percent, axis ){\n\n        var model = this.models[this.current_model]\n\n        if (axis === 'vertical') {\n            model.settings.tree.node_vertical_size = model.settings.tree.node_vertical_size * (1 + percent)\n        }\n        else if (axis === 'horizontal') {\n            model.settings.tree.node_horizontal_size = model.settings.tree.node_horizontal_size * (1 + percent)\n        }\n\n        this.viewer.d3_cluster.nodeSize([ model.settings.tree.node_vertical_size,model.settings.tree.node_horizontal_size])\n        this.viewer.build_d3_cluster()\n        this.viewer.render(this.viewer.hierarchy)\n\n        if (this.viewer.interface && model.settings.use_branch_lenght) {\n            var k = this.viewer.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_4__.select(\"#master_g\" + this.viewer.uid).node()).k\n            this.viewer.interface.update_scale_value(k);\n        }\n\n    }\n\n    modify_node_size(axis, variation){\n\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        if (axis === 'vertical') {\n            if ((model.settings.tree.node_vertical_size + variation) <= 0){return}\n            model.settings.tree.node_vertical_size += variation\n        }\n        else if (axis === 'horizontal') {\n            if ((model.settings.tree.node_horizontal_size + variation) <= 0){return}\n            model.settings.tree.node_horizontal_size += variation\n        }\n\n        viewer.d3_cluster.nodeSize([ model.settings.tree.node_vertical_size,model.settings.tree.node_horizontal_size])\n        viewer.build_d3_cluster()\n        viewer.render(viewer.hierarchy)\n\n\n        if (viewer.interface && model.settings.use_branch_lenght) {\n            var k = viewer.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_4__.select(\"#master_g\" + viewer.uid).node()).k\n            viewer.interface.update_scale_value(k);\n        }\n\n    }\n\n    update_node_radius_percent(percent){\n\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        model.settings.tree.node_radius =  model.settings.tree.node_radius * (1 + percent)\n        viewer.render(viewer.hierarchy)\n    }\n\n    update_line_width_percent(percent){\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        model.settings.tree.line_width = model.settings.tree.line_width * (1 + percent)\n        viewer.render(viewer.hierarchy)\n    }\n\n    update_font_size(val){\n        this.viewer.model.settings.tree.font_size = val\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_node(val){\n        this.viewer.model.settings.style.font_size_internal = val\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_leaf_percent(val){\n        this.viewer.model.settings.tree.font_size = this.viewer.model.settings.tree.font_size  * (1 + val)\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_node_percent(val){\n        this.viewer.model.settings.style.font_size_internal = this.viewer.model.settings.style.font_size_internal * (1 + val)\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    //\n\n    compute_topology_and_render_bounded_viewer(recompute=true){ // change to als eby default and deal with elementS -> one vlue instead of model uid to val\n\n        // if bound container and compare mode activate, we need to update it too\n        if (this.api.settings.compareMode && this.api.bound_container.includes(this)){\n\n\n\n            var con1 = this.api.bound_container[0]\n            var con2 =  this.api.bound_container[1]\n\n\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                this.api.compute_visible_topology_similarity( recompute)\n\n\n            var ccc = (con1 == this) ? con2 : con1\n            ccc.viewer.render(ccc.viewer.hierarchy)\n\n            }\n        }\n    }\n\n    reroot_to_compared_tree(){\n\n\n        var con1 = this.api.bound_container[0]\n        var con2 =  this.api.bound_container[1]\n\n        if (con1 && con2){\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                var ccc = (con1 == this) ? con2 : con1\n                var model = ccc.viewer.model\n\n                var bcnode = model.data.children[0].elementBCN[this.viewer.model.uid]\n                if(bcnode && bcnode.parent){\n                    this.trigger_(\"reroot\", bcnode)\n                }\n            }\n        }\n    }\n\n    reorder_to_compared_tree(){\n\n        var con1 = this.api.bound_container[0]\n        var con2 =  this.api.bound_container[1]\n\n        if (con1 && con2){\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                var ccc = (con1 == this) ? con2 : con1\n                var model_reference = ccc.viewer.model\n\n\n                this.viewer.model.traverse(this.viewer.model.data, null,  (child,d) => {\n\n\n\n                    if (child.children || child._children) {\n                        var leaves =   Array.from(child.leaves, (_, k) => _.name);\n                        var fixedLeaves = this.getCorrespondingNode(leaves, model_reference.data);\n\n                        if (leaves[0] !== fixedLeaves[0] && leaves[leaves.length - 1] !== fixedLeaves[fixedLeaves.length - 1]) {\n                            this.reorder_leaves(child);\n                        }\n                    }\n                })\n\n                this.viewer.set_data(this.viewer.model)\n                this.viewer.render(this.viewer.hierarchy)\n\n            }\n        }\n\n    }\n\n    getCorrespondingNode(treeLeaves, ifixedTree) {\n\n        var bestCorrespondingFixTreeLeaves = [];\n        var bestCount = 0;\n\n        this.viewer.model.traverse(ifixedTree, null,  (child,d) => {\n\n\n            if (child.children || child._children) {\n                var fixedTreeLeaves = Array.from(child.leaves, (_, k) => _.name);\n                var count = 0;\n                for (var i = 0; i < fixedTreeLeaves.length; i++) {\n                    if (treeLeaves.indexOf(fixedTreeLeaves[i]) !== -1) {\n                        count += 1;\n                    }\n                }\n\n                if (count > bestCount) {\n                    bestCorrespondingFixTreeLeaves = fixedTreeLeaves;\n                    bestCount = count;\n                }\n\n            }\n\n        })\n\n        return bestCorrespondingFixTreeLeaves;\n    }\n\n    reorder_leaves(d){\n\n        var bocal;\n\n        if (d.children) {bocal = d.children }\n        else if (d._children) {bocal = d._children }\n        else {return}\n\n        var e = bocal.pop()\n        bocal.unshift(e)\n        d.leaves = this.viewer.model.get_leaves(d)\n\n\n    }\n\n    create_model_from_hierarchy_node(node){\n\n        var data = Object.assign({}, node.data);\n\n        this.viewer.model.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n            n.correspondingLeaf = {}\n            n.elementBCN = null})\n\n\n        var data = JSON.parse(JSON.stringify(data))\n\n        var model = this.viewer.model;\n        this.add_tree(data, model.settings, false)\n\n        this.models[this.models.length-1].add_circularity_back()\n\n        this.viewer.model.add_circularity_back()\n\n        this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this)\n\n\n\n    }\n\n    export_as_newick(){\n        var nwk = parser.parse_json(this.viewer.model.remove_circularity())\n\n        save_file_as(this.viewer.model.settings.name  + \".nwk\", nwk)\n\n\n    }\n\n};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/container.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Container)\n/* harmony export */ });\n/* harmony import */ var _viewer_js__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! ./viewer.js */ \"./src/viewer.js\");\n/* harmony import */ var _model_js__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./model.js */ \"./src/model.js\");\n/* harmony import */ var _interface__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./interface */ \"./src/interface.js\");\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\n\n\n\n\nconst { build_table, save_file_as, colorDifference } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\nvar parser = __webpack_require__(/*! biojs-io-newick */ \"./node_modules/biojs-io-newick/src/index.js\");\n\n\nvar uid_container = 0 // unique id generator is bound to a single Container()\n\n// Object that bind a div with a d3 Viewer() and one or multiple Model()\nclass Container {\n    get uid() {\n        return this._uid;\n    }\n\n    constructor(container_id, api) {\n\n        this._uid = uid_container++; // unique container id\n        this.div_id = container_id; // related div id\n        this.models = []; // list of Model()\n        this.settings = {}; // per container settings\n        this.current_model = 0; // current model index\n        this.viewer = new _viewer_js__WEBPACK_IMPORTED_MODULE_0__[\"default\"](this); // attach Viewer()\n        this.history_actions = [] //  for Undo feature\n        this.undone_actions = [] //  for Undo feature\n        this.api = api\n        this.message_loader = null\n\n    }\n\n    replace_model(old_model,new_model){\n        var index = this.models.indexOf(old_model);\n\n        if (~index) {\n            this.models[index] = new_model;\n        }\n\n    }\n\n    add_action(undo, redo, refresh_interface){\n\n        /* undo and redo object - {'name': X, 'fonct': X, 'fonction_obj': X, 'argu': X} */\n\n        if (this.api.undoing) {\n            return\n        }\n\n\n        this.history_actions.push(\n            {\n            'undo': undo,\n            'redo': redo,\n            'refresh_interface' : (typeof refresh_interface !== 'undefined') ? refresh_interface : false,\n            }\n        )\n\n\n    }\n\n    get_last_action(){\n        return this.history_actions[this.history_actions.length-1]\n    }\n\n    pop_last_action(){\n        var pop  = this.history_actions.pop()\n        this.undone_actions.push(pop)\n        return pop\n    }\n\n    pop_redo_action(){\n        return this.undone_actions.pop()\n    }\n\n\n    // create and add Model() configure with params\n    add_tree(data, settings, from_raw_data=true){\n        this.models.push(new _model_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](data, settings, from_raw_data))\n    }\n\n    remove_all_trees(){\n        this.models = []\n    }\n\n    remove_current_tree(apply_change_UI){\n\n        var apply_change_UI = (typeof apply_change_UI !== 'undefined') ? apply_change_UI : false;\n\n        var current_model = this.models[this.current_model]\n\n        const index = this.models.indexOf(current_model);\n        if (index > -1) {\n            this.models.splice(index, 1);\n\n            if (this.current_model > this.models.length -1){\n                console.log('out of index - recalibrating');\n                this.current_model -= 1\n\n            }\n\n            if (apply_change_UI){\n                if (this.models.length == 0){\n\n                    this.current_model = 0\n\n                    this.viewer.remove_data()\n                    this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this, true)\n                }\n                else{\n                    this.shift_model(0, false)\n                }\n            }\n\n        }\n\n\n\n\n    }\n\n    // update the data viewer and render it\n    start(rendering){\n\n\n        if (this.models.length <= 0){\n            this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this, true)\n            return\n        }\n\n        var rendering = (typeof rendering !== 'undefined') ? rendering : false; // todo inverted ??\n\n        this.viewer.set_data(this.models[this.current_model]);\n\n        if (rendering){\n\n            var z = this.models[this.current_model].zoom\n\n\n            if (z) {\n                this.viewer.set_zoom(z.k, z.x, z.y)\n            }\n\n            this.viewer.render(this.viewer.hierarchy);\n            //this.viewer.update_collapse_level(this.models[this.current_model].settings.collapse_level)\n\n\n\n        }\n\n        //this.viewer.zoom_by(0.4) #STACK\n        //this.viewer.render(this.viewer.hierarchy); #STACK\n\n    }\n\n    // shift the pointer (if possible) in the model list and update viewer model\n    shift_model(offset, store_old) {\n\n\n        var store_old = (typeof store_old !== 'undefined') ? store_old : true;\n\n\n        if (this.current_model + offset >= 0 && this.current_model + offset <= this.models.length -1 ) {\n\n            //this.add_action('Change tree',  this, this.shift_model, [-offset, store_old] )\n\n            if (store_old){\n                // store the current zoom information\n                var old_m = this.models[this.current_model]\n                old_m.store_zoomTransform(this.viewer.d3.zoomTransform(this.viewer.svg.node()))\n            }\n\n            // update new model data to viewer\n            this.current_model += offset;\n            var m = this.models[this.current_model]\n\n\n\n            this.viewer.set_data(m)\n\n\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(false)\n\n            // apply if any stored zoom information\n            var z = m.zoom\n            if (z) {\n                this.viewer.set_zoom(z.k, z.x, z.y)\n\n            }\n\n            this.viewer.render(this.viewer.hierarchy)\n\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.send_worker_distance()\n            }\n\n\n\n\n        }\n\n    }\n\n    // send action trigger to model, update the data/build d3 data & render the viewer\n    trigger_(action, data, node){\n\n        var m = this.models[this.current_model];\n\n        if (action === 'collapse') {\n\n            var name_undo,name_redo;\n\n            if (data.children && data.collapse){\n                name_undo = 'Collapse this node';\n                name_redo = 'Expand this node';\n            }\n            else {\n                name_undo = 'Expand this node';\n                name_redo = 'Collapse this node';\n            }\n\n            var undo = {'name': name_undo, 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            var redo = {'name': name_redo, 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n            m.collapse(data)\n            this.viewer.apply_collapse_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'collapseAll') {\n\n            var undo = {'name': 'Expand All', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': ['expandAll', data, node]}\n            var redo = {'name': 'Collapse All', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            m.collapseAll(data, true)\n            this.viewer.apply_collapseAll_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'expandAll') {\n\n            var undo = {'name': 'Collapse All', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': ['collapseAll', data, node]}\n            var redo = {'name': 'Expand All', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            m.collapseAll(data, false)\n            this.viewer.apply_expandAll_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n        }\n        else if (action === 'swap') {\n\n            var undo = {'name': 'Unswap', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': ['unswap', data, node]}\n            var redo = {'name': 'Swap', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            m.swap_subtrees(data)\n            this.viewer.apply_swap_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n\n        }\n        else if (action === 'unswap') {\n            m.unswap_subtrees(data)\n            this.viewer.apply_unswap_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n\n        }\n        else if (action === 'reroot'){\n\n            var undo = {'name': 'Reroot', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': ['reroot', this.viewer.hierarchy.children[0].data, null]}\n            var redo = {'name': 'Reroot', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            m.reroot(data)\n            m.rooted = true\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n\n            this.viewer.render(this.viewer.hierarchy)\n\n            this.update_highlighted_node()\n\n\n        }\n        else if (action === 'trim'){\n            var untrim_data = m.trim(data.data)\n\n\n            var undo = {'name': 'Untrim', 'fonction_obj': this, 'fonct': this.trigger_, 'argu':['untrim', untrim_data, null]}\n            var redo = {'name': 'Trim', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n            this.viewer.render(this.viewer.hierarchy)\n        }\n        else if (action === 'untrim'){\n            m.untrim(data.parent, data.floating, data.child, data.index, data.root_mode)\n            this.viewer.set_data(m)\n            m.hierarchy_mockup = m.build_hierarchy_mockup()\n            m.table = build_table(m.hierarchy_mockup)\n            this.api.stop_all_workers()\n            this.compute_topology_and_render_bounded_viewer(true)\n            if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n                this.api.delete_modele_distance(m)\n                this.api.send_worker_distance()\n            }\n            this.viewer.render(this.viewer.hierarchy)\n        }\n        else if (action === 'force_show_label'){\n\n            var undo = {'name': 'Toggle Label', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            var redo = {'name': 'Toggle Label', 'fonction_obj': this, 'fonct': this.trigger_, 'argu': [action, data, node]}\n            this.add_action(undo, redo)\n\n            m.toggle_show_label(data)\n            this.viewer.apply_show_label_from_data_to_d3(data, node)\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n\n        }\n        else if (action === 'BCN'){\n\n            var other_container = this.api.bound_container[0] === this ? this.api.bound_container[1] : this.api.bound_container[0]\n\n            // get BCN node\n            var target_node = node.data.elementBCN[other_container.viewer.model.uid]\n\n            if (!target_node){\n                console.log('No BCN node found for this container')\n                return\n            }\n\n            var target_hierarchy = this.getHierarchyNodeFromModelNode(target_node, other_container.viewer.hierarchy)\n\n\n            other_container.expandToRoot(target_node)\n            other_container.viewer.centerNode(target_hierarchy)\n\n            target_node._show_BCN = true\n            other_container.viewer.blinking = 6\n            other_container.viewer.render(other_container.viewer.hierarchy)\n\n        }\n\n    }\n\n    expandToRoot(node_model ) {\n\n        var model  = this.viewer.model;\n        var hierarchy = this.viewer.hierarchy;\n\n        var node = node_model\n        while (node) {\n            model.collapse(node, false)\n\n            var node_hierarchy = this.getHierarchyNodeFromModelNode(node, hierarchy)\n            this.viewer.apply_collapse_from_data_to_d3(node, node_hierarchy)\n            node = node.parent; // Move to the parent node\n        }\n\n    }\n\n\n\n\n\n    // collapse all node from depth\n    collapse_depth(depth, tree){\n\n        var f\n\n        var model =  this.models[this.current_model];\n        var viewer = this.viewer;\n\n\n        if (depth == 0 ){\n\n            f = function(n,c) {\n                model.collapse(n.data, false)\n                viewer.apply_collapse_from_data_to_d3(n.data, n)\n            }\n        }\n        else {\n            f = function(n,c){\n\n                if (n.depth >= depth  ){\n\n                    model.collapse(n.data, true)\n\n                }\n                else{\n                    model.collapse(n.data, false)\n                }\n\n                viewer.apply_collapse_from_data_to_d3(n.data, n)\n            }\n        }\n\n        this.models[this.current_model].traverse_hierarchy(this.viewer.hierarchy,  f )\n\n\n\n    }\n\n    collapse_node_not_colored(){\n\n        var model =  this.models[this.current_model];\n        var viewer = this.viewer;\n        var f_pre, f_post;\n\n        var is_leaf = function(node) {\n            return !node.children && !node._children;\n        }\n\n        switch (model.settings.selected_collapse_uncolored) {\n\n            case 'Leaves':\n\n                f_pre = function(node, children){\n\n                    node.colored = false;\n                    node.data.colored = false;\n\n                    if (is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['leaf']] !== undefined  ){\n                        node.colored = true;\n                        node.data.colored = true;\n                    }\n\n                }\n\n                f_post = function(child, node){\n\n                    // go through node.data.leaves and check if one colored break\n                    var leaves = child.data.leaves ? child.data.leaves : []\n                    for (const leafKey in leaves) {\n                        const leaf = leaves[leafKey];\n                        if (leaf.colored) {\n                            return\n                        }\n                    }\n\n                    model.collapse(child.data, true)\n                    viewer.apply_collapse_from_data_to_d3(child.data, child)\n                }\n\n                break;\n\n            case 'Nodes':\n\n                var f_pre = function(node, children){\n\n                    node.colored = false;\n                    node.data.colored = false;\n\n                    if ( !is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['node']] !== undefined  ){\n                        node.colored = true;\n                        node.data.colored = true;\n                    }\n\n                }\n\n                var f_post = function(child, node){\n\n                    if (is_leaf(child)){ return }\n\n                    var children_list = child.children ? child.children : child._children\n\n                    for (const childrenListKey in children_list) {\n\n                        var e = children_list[childrenListKey]\n\n                        if (is_leaf(e)){continue}\n\n                        if (e.colored) {\n                            return\n                        }\n\n                    }\n\n                    model.collapse(child.data, true)\n                    viewer.apply_collapse_from_data_to_d3(child.data, child)\n                }\n\n                break;\n            case 'Both':\n\n                var f_pre = function(node, children){\n\n                    node.colored = false;\n                    node.data.colored = false;\n\n                    if ( !is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['node']] !== undefined  ){\n                        node.colored = true;\n                        node.data.colored = true;\n                    }\n                    else if (is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['leaf']] !== undefined  ){\n                        node.colored = true;\n                        node.data.colored = true;\n                    }\n\n                }\n\n                var f_post = function(child, node){\n\n                    if (is_leaf(child)){return}\n\n                    var children_list = child.children ? child.children : child._children\n\n                    for (const childrenListKey in children_list) {\n\n                        var e = children_list[childrenListKey]\n\n                        if (e.colored) {\n                            return\n                        }\n\n                    }\n\n                    model.collapse(child.data, true)\n                    viewer.apply_collapse_from_data_to_d3(child.data, child)\n                }\n\n                break;\n            default:\n                console.log('Unknown collapse option: ' + model.settings.selected_collapse_uncolored)\n                return;\n\n        }\n\n        this.models[this.current_model].traverse_hierarchy(this.viewer.hierarchy,f_pre, f_post)\n\n    }\n\n    monocolored_check_and_collapse(colors,child ){\n\n        var model = this.models[this.current_model]\n\n        switch (colors.size) {\n            case 0:\n                break; // no color, do nothing\n            case 1:\n                model.collapse(child.data, true)\n                this.viewer.apply_collapse_from_data_to_d3(child.data, child)\n                break;\n            default:\n                // compute the all pair of colorDifference in colors. If one above 10% return\n                var colorArray = Array.from(colors)\n                for (let i = 0; i < colorArray.length; i++) {\n                    for (let j = i + 1; j < colorArray.length; j++) {\n                        if (colorDifference(colorArray[i], colorArray[j]) > 0.05) {\n                            return; // multiple colors, do not collapse\n                        }\n                    }\n                }\n                model.collapse(child.data, true)\n                this.viewer.apply_collapse_from_data_to_d3(child.data, child)\n                break\n        }\n    }\n\n    collapse_node_same_color(){\n\n        var that = this\n\n        var model =  this.models[this.current_model];\n        var viewer =  this.viewer;\n        var compared_model = viewer.get_compared_model()\n        var f_pre, f_post;\n\n        var is_leaf = function(node) {\n            return !node.children && !node._children;\n        }\n\n\n        switch (model.settings.selected_collapse_monocolored) {\n\n            case 'Leaves':\n\n                f_pre = function(node, children){\n\n                    node.renderedColor = false;\n                    node.data.renderedColor = false;\n\n                    if (is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['leaf']] !== undefined  ){\n                        node.renderedColor = viewer.get_color_label(node)\n                        node.data.renderedColor = viewer.get_color_label(node)\n\n                    }\n\n                }\n\n                f_post = function(child, node){\n\n                    var colors = new Set()\n\n                    var leaves = child.data.leaves ? child.data.leaves : []\n\n                    for (const leafKey in leaves) {\n                        const leaf = leaves[leafKey];\n\n                        if (!leaf.renderedColor) {\n                            continue\n                        }\n\n                        colors.add(leaf.renderedColor)\n                    }\n\n\n\n                    that.monocolored_check_and_collapse(colors,child )\n\n                    viewer.apply_collapse_from_data_to_d3(child.data, child)\n\n                }\n\n                break;\n\n            case 'Nodes':\n\n                f_pre = function(node, children){\n\n\n                    node.renderedColor = false;\n                    node.data.renderedColor = false;\n\n                    if ( !is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['node']] !== undefined  ){\n                        node.renderedColor = viewer.color_edge(node, compared_model);\n                        node.data.renderedColor = viewer.color_edge(node, compared_model);\n                    }\n\n                }\n\n                f_post = function(child, node){\n\n                    if (is_leaf(child)){ return }\n\n                    var children_list = child.children ? child.children : child._children\n\n                    // check if all children_list are leaf return\n                    if (children_list.length === 0 || children_list.every(is_leaf)) {\n                        return;\n                    }\n\n                    child.colors = new Set()\n\n                    for (const childrenListKey in children_list) {\n\n                        var e = children_list[childrenListKey]\n\n                        if (is_leaf(e)){continue}\n\n\n                        if (e.colors){\n                            child.colors = new Set([...child.colors, ...e.colors]);\n\n                        }\n                        else if (e.renderedColor){\n                            child.colors.add(e.renderedColor)\n                        }\n                        else{\n                            child.colors = new Set()\n                            return\n                        }\n\n\n                    }\n\n                    that.monocolored_check_and_collapse(child.colors,child )\n\n\n                }\n\n                break;\n\n            case 'Both':\n\n                f_pre = function(node, children){\n\n\n                    node.renderedColor = false;\n                    node.data.renderedColor = false;\n\n                    if ( is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['node']] !== undefined  ){\n                        node.renderedColor = viewer.color_edge(node, compared_model);\n                        node.data.renderedColor = viewer.color_edge(node, compared_model);\n                    }\n                    else if (is_leaf(node) && node.data.extended_informations[model.settings.style.color_accessor['leaf']] !== undefined  ){\n                        node.renderedColor = viewer.get_color_label(node)\n                        node.data.renderedColor = viewer.get_color_label(node)\n                    }\n\n                }\n\n                f_post = function(child, node){\n\n                    if (is_leaf(child)){ return }\n\n                    var children_list = child.children ? child.children : child._children\n\n                    child.colors = new Set()\n\n                    for (const childrenListKey in children_list) {\n\n                        var e = children_list[childrenListKey]\n\n                        if (e.colors){\n                            child.colors = new Set([...child.colors, ...e.colors]);\n\n                        }\n                        else if (e.renderedColor){\n                            child.colors.add(e.renderedColor)\n                        }\n                        else{\n                            child.colors = new Set()\n                            return\n                        }\n\n\n\n                    }\n\n                    that.monocolored_check_and_collapse(child.colors,child )\n\n                }\n\n                break;\n            default:\n                console.log('Unknown collapse option: ' + model.settings.selected_collapse_uncolored)\n                return;\n\n        }\n\n        this.models[this.current_model].traverse_hierarchy(this.viewer.hierarchy,f_pre, f_post)\n\n\n\n\n    }\n\n    highlight_node(name){\n\n        if (name === ''){return}\n\n\n        if(this.viewer.model.settings.multiple_search != true) {\n\n            this.viewer.hierarchy.each(function (d) {\n                d.data.search_path = false;\n                d.data.search_node = false;\n            })\n        }\n\n\n       function searchTree(obj,search,path){\n           if(obj.data.name === search){ //if search is found return, add the object to the path and return it\n\n               path.push(obj);\n               return path;\n           }\n           else if(obj.children || obj._children){ //if children are collapsed d3 object will have them instantiated as _children\n               var children = (obj.children) ? obj.children : obj._children;\n               for(var i=0;i<children.length;i++){\n                   path.push(obj);// we assume this path is the right one\n                   var found = searchTree(children[i],search,path);\n                   if(found){// we were right, this should return the bubbled-up path from the first if statement\n                       return found;\n                   }\n                   else{//we were wrong, remove this parent from the path and continue iterating\n                       path.pop();\n                   }\n               }\n           }\n           else{//not the right object, return false so it will continue to iterate in the loop\n               return false;\n           }\n       }\n\n\n       var p = searchTree(this.viewer.hierarchy, name, [])\n\n\n\n       for(var i=1;i<p.length;i++){ // 1 is for skipping the root\n\n           this.models[this.current_model].collapse(p[i].data, false)\n           this.viewer.apply_collapse_from_data_to_d3(p[i].data, p[i])\n           p[i].data.search_path = true;\n\n\n       }\n\n       p[p.length-1].data.search_node = true;\n\n       this.viewer.set_data(this.models[this.current_model])\n        this.viewer.render(this.viewer.hierarchy, 0);\n\n       var n= []\n       this.viewer.hierarchy.each(function(d) { if (d.data.name === name){n.push(d)}})\n\n        //this.viewer.centerNode(n[0])\n\n\n    }\n\n    remove_highlight_node(){\n        this.viewer.hierarchy.each(function(d) {\n            d.data.search_path = false;\n            d.data.search_node = false;\n        })\n    }\n\n    update_highlighted_node(){\n        var highlighted = []\n\n        this.viewer.hierarchy.each(function(d) {\n\n            d.data.search_path = false;\n\n            if (d.data.search_node){\n                highlighted.push(d)\n\n            }\n        })\n\n        for (const highlightedKey in highlighted) {\n            this.highlight_node(highlighted[highlightedKey].data.name)\n        }\n\n\n    }\n\n    toggle_rooting(){\n        this.models[this.current_model].rooted = !this.models[this.current_model].rooted\n        this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this)\n        this.viewer.render(this.viewer.hierarchy)\n\n        if (this.api.settings.compute_distance && this.api.bound_container.includes(this)){\n            this.api.delete_modele_distance(m)\n            this.api.send_worker_distance()\n        }\n\n    }\n\n    toggle_stack(){\n\n        var ms = this.models[this.current_model].settings\n\n        if (ms.has_histogram_data){\n\n            ms.show_histogram = !ms.show_histogram;\n            this.viewer.set_data(this.models[this.current_model])\n            this.viewer.render(this.viewer.hierarchy)\n\n        }\n\n\n\n    }\n\n    // INTERFACE CONTROL\n\n    modify_node_size_percent(percent, axis ){\n\n        var model = this.models[this.current_model]\n\n        if (axis === 'vertical') {\n            model.settings.tree.node_vertical_size = model.settings.tree.node_vertical_size * (1 + percent)\n        }\n        else if (axis === 'horizontal') {\n            model.settings.tree.node_horizontal_size = model.settings.tree.node_horizontal_size * (1 + percent)\n        }\n\n        this.viewer.d3_cluster.nodeSize([ model.settings.tree.node_vertical_size,model.settings.tree.node_horizontal_size])\n        this.viewer.build_d3_cluster()\n        this.viewer.render(this.viewer.hierarchy)\n\n        if (this.viewer.interface && model.settings.use_branch_lenght) {\n            var k = this.viewer.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_4__.select(\"#master_g\" + this.viewer.uid).node()).k\n            this.viewer.interface.update_scale_value(k);\n        }\n\n    }\n\n    modify_node_size(axis, variation){\n\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        if (axis === 'vertical') {\n            if ((model.settings.tree.node_vertical_size + variation) <= 0){return}\n            model.settings.tree.node_vertical_size += variation\n        }\n        else if (axis === 'horizontal') {\n            if ((model.settings.tree.node_horizontal_size + variation) <= 0){return}\n            model.settings.tree.node_horizontal_size += variation\n        }\n\n        viewer.d3_cluster.nodeSize([ model.settings.tree.node_vertical_size,model.settings.tree.node_horizontal_size])\n        viewer.build_d3_cluster()\n        viewer.render(viewer.hierarchy)\n\n\n        if (viewer.interface && model.settings.use_branch_lenght) {\n            var k = viewer.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_4__.select(\"#master_g\" + viewer.uid).node()).k\n            viewer.interface.update_scale_value(k);\n        }\n\n    }\n\n    update_node_radius_percent(percent){\n\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        model.settings.tree.node_radius =  model.settings.tree.node_radius * (1 + percent)\n        viewer.render(viewer.hierarchy)\n    }\n\n    update_line_width_percent(percent){\n        var model = this.models[this.current_model]\n        var viewer = this.viewer\n\n        model.settings.tree.line_width = model.settings.tree.line_width * (1 + percent)\n        viewer.render(viewer.hierarchy)\n    }\n\n    update_font_size(val){\n        this.viewer.model.settings.tree.font_size = val\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_node(val){\n        this.viewer.model.settings.style.font_size_internal = val\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_leaf_percent(val){\n        this.viewer.model.settings.tree.font_size = this.viewer.model.settings.tree.font_size  * (1 + val)\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    update_font_size_node_percent(val){\n        this.viewer.model.settings.style.font_size_internal = this.viewer.model.settings.style.font_size_internal * (1 + val)\n        this.viewer.render(this.viewer.hierarchy)\n    }\n\n    //\n\n    compute_topology_and_render_bounded_viewer(recompute=true){ // change to als eby default and deal with elementS -> one vlue instead of model uid to val\n\n        // if bound container and compare mode activate, we need to update it too\n        if (this.api.settings.compareMode && this.api.bound_container.includes(this)){\n\n\n\n            var con1 = this.api.bound_container[0]\n            var con2 =  this.api.bound_container[1]\n\n\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                this.api.compute_visible_topology_similarity( recompute)\n\n\n            var ccc = (con1 == this) ? con2 : con1\n            ccc.viewer.render(ccc.viewer.hierarchy)\n\n            }\n        }\n    }\n\n    reroot_to_compared_tree(){\n\n\n        var con1 = this.api.bound_container[0]\n        var con2 =  this.api.bound_container[1]\n\n        if (con1 && con2){\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                var ccc = (con1 == this) ? con2 : con1\n                var model = ccc.viewer.model\n\n                var bcnode = model.data.children[0].elementBCN[this.viewer.model.uid]\n                if(bcnode && bcnode.parent){\n                    this.trigger_(\"reroot\", bcnode)\n                }\n            }\n        }\n    }\n\n    reorder_to_compared_tree(){\n\n        var con1 = this.api.bound_container[0]\n        var con2 =  this.api.bound_container[1]\n\n        if (con1 && con2){\n\n            if ( con1.models.length > 0 && con2.models.length > 0){\n                var ccc = (con1 == this) ? con2 : con1\n                var model_reference = ccc.viewer.model\n\n\n                this.viewer.model.traverse(this.viewer.model.data, null,  (child,d) => {\n\n\n\n                    if (child.children || child._children) {\n                        var leaves =   Array.from(child.leaves, (_, k) => _.name);\n                        var fixedLeaves = this.getCorrespondingNode(leaves, model_reference.data);\n\n                        if (leaves[0] !== fixedLeaves[0] && leaves[leaves.length - 1] !== fixedLeaves[fixedLeaves.length - 1]) {\n                            this.reorder_leaves(child);\n                        }\n                    }\n                })\n\n                this.viewer.set_data(this.viewer.model)\n                this.viewer.render(this.viewer.hierarchy)\n\n            }\n        }\n\n    }\n\n    getCorrespondingNode(treeLeaves, ifixedTree) {\n\n        var bestCorrespondingFixTreeLeaves = [];\n        var bestCount = 0;\n\n        this.viewer.model.traverse(ifixedTree, null,  (child,d) => {\n\n\n            if (child.children || child._children) {\n                var fixedTreeLeaves = Array.from(child.leaves, (_, k) => _.name);\n                var count = 0;\n                for (var i = 0; i < fixedTreeLeaves.length; i++) {\n                    if (treeLeaves.indexOf(fixedTreeLeaves[i]) !== -1) {\n                        count += 1;\n                    }\n                }\n\n                if (count > bestCount) {\n                    bestCorrespondingFixTreeLeaves = fixedTreeLeaves;\n                    bestCount = count;\n                }\n\n            }\n\n        })\n\n        return bestCorrespondingFixTreeLeaves;\n    }\n\n    reorder_leaves(d){\n\n        var bocal;\n\n        if (d.children) {bocal = d.children }\n        else if (d._children) {bocal = d._children }\n        else {return}\n\n        var e = bocal.pop()\n        bocal.unshift(e)\n        d.leaves = this.viewer.model.get_leaves(d)\n\n\n    }\n\n    create_model_from_hierarchy_node(node){\n\n        var data = Object.assign({}, node.data);\n\n        this.viewer.model.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n            n.correspondingLeaf = {}\n            n.elementBCN = null})\n\n\n        var data = JSON.parse(JSON.stringify(data))\n\n        var model = this.viewer.model;\n        this.add_tree(data, model.settings, false)\n\n        this.models[this.models.length-1].add_circularity_back()\n\n        this.viewer.model.add_circularity_back()\n\n        this.interface = new _interface__WEBPACK_IMPORTED_MODULE_2__[\"default\"](this.viewer, this)\n\n\n\n    }\n\n    export_as_newick(){\n        var nwk = parser.parse_json(this.viewer.model.remove_circularity())\n\n        save_file_as(this.viewer.model.settings.name  + \".nwk\", nwk)\n\n\n    }\n\n    escape_string_for_nhx(str){\n        // replace ( ) [ ] , : ; as well as white space with _\n        return str.replace(/[\\s\\(\\)\\[\\],:;]/g, '_')\n    }\n    convertToExtendedNewick(node) {\n        let result = '';\n\n        if (node.children) {\n            const childrenNewick = node.children.map(this.convertToExtendedNewick, this).join(',');\n            result += `(${childrenNewick})`;\n        }\n\n        result += node.name;\n\n\n        if (node.extended_informations['Length'] !== undefined) {\n            result += `:${node.branch_length}`;\n        }\n\n        var str_extended = ''\n\n        for (const key in node.extended_informations) {\n            if (key !== 'Length' && node.extended_informations[key] ) {\n                str_extended += `:${key}=${this.escape_string_for_nhx(node.extended_informations[key])}`;\n            }\n        }\n\n        if (str_extended !== '') {\n            result += `[&&NHX${str_extended}]`\n        }\n\n        return result;\n    }\n\n    export_as_nhx(){\n        var nhx = this.convertToExtendedNewick(this.viewer.model.data)\n\n        save_file_as(this.viewer.model.settings.name  + \".nhx\", nhx)\n\n\n    }\n\n    traverseAllNodes(node, callback) {\n        callback(node); // Apply the callback to the current node\n        const children = node.children || node._children; // Include both expanded and collapsed nodes\n        if (children) {\n            children.forEach((child) => this.traverseAllNodes(child, callback));\n        }\n    }\n\n    getHierarchyNodeFromModelNode(modelNode, hierarchy) {\n        let equivalentNode = null;\n\n        this.traverseAllNodes(hierarchy, (d) => {\n            if (d.data === modelNode) {\n                equivalentNode = d;\n            }\n        });\n\n        return equivalentNode;\n    }\n\n\n\n\n};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/container.js?");
 
 /***/ }),
 
@@ -8703,7 +8591,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   init: () => (/* binding */ init)\n/* harmony export */ });\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n/* harmony import */ var bootstrap_dist_css_bootstrap_css__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! bootstrap/dist/css/bootstrap.css */ \"./node_modules/bootstrap/dist/css/bootstrap.css\");\n/* harmony import */ var _style_css__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./style.css */ \"./src/style.css\");\n/* harmony import */ var _interface_css__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! ./interface.css */ \"./src/interface.css\");\n/* harmony import */ var _progress_wizard_min_css__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! ./progress-wizard.min.css */ \"./src/progress-wizard.min.css\");\n/* harmony import */ var _fontawesome_free_6_2_0_web_css_all_css__WEBPACK_IMPORTED_MODULE_5__ = __webpack_require__(/*! ./fontawesome-free-6.2.0-web/css/all.css */ \"./src/fontawesome-free-6.2.0-web/css/all.css\");\n/* harmony import */ var _api_js__WEBPACK_IMPORTED_MODULE_6__ = __webpack_require__(/*! ./api.js */ \"./src/api.js\");\n/*\n\nPhylo.IO is build following the MVC architecture:\n- Container class (or Controller): the class that connects a single viewer (div) and the\nloaded model through user interactions.\n- Viewer class: the d3 viewer that can render any model object.\n- Model class: the data for a single tree with associated computed information (\nzoom, transform, annotated information, etc..)\n\nThe PhyloIO manage the app that can have any number of Container (associated to an unique DOM div) that each\ncontains a Viewer instance. Each Viewer (and by consequent Container) can have multiple models (trees)\n\n */\n\n\n\n\n\n\n\n\n\n\n\n\n\nObject.values = Object.values || function(o){return Object.keys(o).map(function(k){return o[k]})};\nString.prototype.format = function () {\n  var i = 0, args = arguments;\n  return this.replace(/{}/g, function () {\n    return typeof args[i] != 'undefined' ? args[i++] : '';\n  });\n};\n\nconst init = function(){\n\n  return new _api_js__WEBPACK_IMPORTED_MODULE_6__[\"default\"]()\n}\n\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/index.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   init: () => (/* binding */ init)\n/* harmony export */ });\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n/* harmony import */ var bootstrap_dist_css_bootstrap_css__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! bootstrap/dist/css/bootstrap.css */ \"./node_modules/bootstrap/dist/css/bootstrap.css\");\n/* harmony import */ var _style_css__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! ./style.css */ \"./src/style.css\");\n/* harmony import */ var _interface_css__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! ./interface.css */ \"./src/interface.css\");\n/* harmony import */ var _progress_wizard_min_css__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! ./progress-wizard.min.css */ \"./src/progress-wizard.min.css\");\n/* harmony import */ var _api_js__WEBPACK_IMPORTED_MODULE_5__ = __webpack_require__(/*! ./api.js */ \"./src/api.js\");\n/*\n\nPhylo.IO is build following the MVC architecture:\n- Container class (or Controller): the class that connects a single viewer (div) and the\nloaded model through user interactions.\n- Viewer class: the d3 viewer that can render any model object.\n- Model class: the data for a single tree with associated computed information (\nzoom, transform, annotated information, etc..)\n\nThe PhyloIO manage the app that can have any number of Container (associated to an unique DOM div) that each\ncontains a Viewer instance. Each Viewer (and by consequent Container) can have multiple models (trees)\n\n */\n\n\n\n\n\n\n\n\n\n\n\n\nObject.values = Object.values || function(o){return Object.keys(o).map(function(k){return o[k]})};\nString.prototype.format = function () {\n  var i = 0, args = arguments;\n  return this.replace(/{}/g, function () {\n    return typeof args[i] != 'undefined' ? args[i++] : '';\n  });\n};\n\nconst init = function(){\n\n  return new _api_js__WEBPACK_IMPORTED_MODULE_5__[\"default\"]()\n}\n\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/index.js?");
 
 /***/ }),
 
@@ -8714,7 +8602,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Interface)\n/* harmony export */ });\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(file_saver__WEBPACK_IMPORTED_MODULE_0__);\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n\n\n\n\n// D3 viewer Interface that render UI elements(buttons, slider, menu)\nclass Interface {\n\n    constructor(v,c, empty_mode){\n\n        var empty_mode = (typeof empty_mode !== 'undefined') ? empty_mode : false;\n\n        this.scale_pixel_length = 120;\n\n        this.container_object = c\n        this.viewer = v\n        this.container_d3 = v.container_d3\n        this.api = this.container_object.api\n\n        //MISC\n        this.dismiss_blur = false\n\n        this.examples={\n            \"small1\": 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           \"stack\" : {\"children\": [{\"children\": [{\"children\": [{\"children\": [{\"id\": \"HALHT\", \"last_updated\": \"Aug 20, 2012\", \"name\": \"Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)\", \"nr_proteins\": 3855, \"release\": \"18-OCT-2011 (Rel. 110, Last updated, Version 2)\", \"source\": \"EBI\", \"taxid\": 634497}, {\"id\": \"HALMA\", \"last_updated\": \"Mar 25, 2014\", \"name\": \"Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)\", \"nr_proteins\": 4231, \"release\": \"02-FEB-2014 (Rel. 119, Last updated, Version 9)\", \"source\": \"EBI\", \"taxid\": 272569}], \"name\": \"Haloarcula\", \"taxid\": 2237, \"nr_hogs\": 4107, \"evolutionaryEvents\": {\"gained\": 178, \"retained\": 3532, \"duplicated\": 397, \"lost\": 1508, \"duplications\": 166}}, {\"id\": \"HALMD\", \"last_updated\": \"Nov 23, 2009\", \"name\": \"Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 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.002093[&&NHX:D=N:B=100:T=9596],ENSP00000369497:0.001566[&&NHX:D=N:T=9606]):0.000219[&&NHX:D=N:B=17:T=207598],ENSGGOP00000027226:0.002031[&&NHX:D=N:T=9595]):0.004252[&&NHX:D=N:B=17:T=207598],ENSPPYP00000005997:0.007072[&&NHX:D=N:T=9601]):0.002903[&&NHX:D=N:B=99:T=9604],ENSNLEP00000001277:0.009571[&&NHX:D=N:T=61853]):0.002446[&&NHX:D=N:B=98:T=314295],(((((ENSCATP00000015406:0.00209[&&NHX:D=N:T=9531],ENSMLEP00000025266:0.0034[&&NHX:D=N:T=9568]):0.000372[&&NHX:D=N:B=60:T=9528],ENSPANP00000022490:0.001777[&&NHX:D=N:T=9555]):0.000724[&&NHX:D=N:B=54:T=9528],((ENSMFAP00000029418:0.001032[&&NHX:D=N:T=9541],ENSMMUP00000009432:0.005844[&&NHX:D=N:T=9544]):0.000105[&&NHX:D=N:B=40:T=9539],ENSMNEP00000025034:0.002176[&&NHX:D=N:T=9545]):0.001473[&&NHX:D=N:B=34:T=9539]):0.000352[&&NHX:D=N:B=54:T=9528],ENSCSAP00000013938:0.003981[&&NHX:D=N:T=60711]):0.00179[&&NHX:D=N:B=55:T=9528],(ENSRROP00000030947:0[&&NHX:D=N:T=61622],ENSRBIP00000000297:0.022474[&&NHX:D=N:T=61621]):0.008142[&&NHX:D=N:B=92:T=542827]):0.008355[&&NHX:D=N:B=58:T=9527]):0.007639[&&NHX:D=N:B=87:T=9526],((ENSCCAP00000031676:0.011669[&&NHX:D=N:T=2715852],ENSCJAP00000093240:0.015902[&&NHX:D=N:T=9483]):0.000332[&&NHX:D=N:B=23:T=9498],ENSANAP00000015411:0.01113[&&NHX:D=N:T=37293]):0.015231[&&NHX:D=N:B=23:T=9479]):0.029405[&&NHX:D=N:B=92:T=314293],ENSTSYP00000000441:0.060665[&&NHX:D=N:T=1868482]):0.003827[&&NHX:D=N:B=90:T=376913],(((ENSPCOP00000008219:0.014484[&&NHX:D=N:T=379532],ENSMICP00000044704:0.023431[&&NHX:D=N:T=30608]):0.001594[&&NHX:D=N:B=93:T=376915],ENSPSMP00000026900:0.017253[&&NHX:D=N:T=1328070]):0.012285[&&NHX:D=N:B=93:T=376915],ENSOGAP00000009477:0.064918[&&NHX:D=N:T=30611]):0.013645[&&NHX:D=N:B=99:T=376911]):0.005986[&&NHX:D=N:B=89:T=9443]):0.009172[&&NHX:D=N:B=12:T=314146]):0.008774[&&NHX:D=N:B=12:T=1437010],(ENSDNOP00000034947:0.046866[&&NHX:D=N:T=9361],ENSCHOP00000007822:0.050851[&&NHX:D=N:T=9358]):0.025312[&&NHX:D=N:B=100:T=9348]):0.006165[&&NHX:D=N:B=15:T=9347],((ENSETEP00000003277:0.154194[&&NHX:D=N:T=9371],ENSPCAP00000000440:0.17644[&&NHX:D=N:T=9813]):0.023418[&&NHX:D=N:B=93:T=311790],ENSLAFP00000002234:0.069853[&&NHX:D=N:T=9785]):0.048728[&&NHX:D=N:B=91:T=311790]):0.102726[&&NHX:D=N:B=69:T=9347],(((ENSVURP00010026286:0.02893[&&NHX:D=N:T=29139],ENSMEUP00000009812:0.045949[&&NHX:D=N:T=9315]):0.007079[&&NHX:D=N:B=96:T=38609],ENSSHAP00000012162:0.055381[&&NHX:D=N:T=9305]):0.015112[&&NHX:D=N:B=96:T=9263],ENSMODP00000033276:0.071803[&&NHX:D=N:T=13616]):0.123926[&&NHX:D=N:B=96:T=9263]):0.06077[&&NHX:D=N:B=87:T=32525],ENSOANP00000039689:0.264045[&&NHX:D=N:T=9258]):0.091853[&&NHX:D=N:B=90:T=40674],((((ENSPMRP00000005460:0.144183[&&NHX:D=N:T=64176],ENSSMRP00000016793:0.20051[&&NHX:D=N:T=96440]):0.009903[&&NHX:D=N:B=99:T=1329976],((ENSNSUP00000017478:0.005634[&&NHX:D=N:T=8663],ENSLLTP00000016858:0.029105[&&NHX:D=N:T=8630]):0.226094[&&NHX:D=N:B=100:T=8602],ENSACAP00000031108:0.186787[&&NHX:D=N:T=28377]):0.032366[&&NHX:D=N:B=7:T=1329911]):0.135778[&&NHX:D=N:B=3:T=1329912],ENSSPUP00000018703:0.144411[&&NHX:D=N:T=8508]):0.0332[&&NHX:D=N:B=0:T=8504],((((((ENSACCP00020021048:0.030244[&&NHX:D=N:T=223781],ENSSHBP00005016070:0.046241[&&NHX:D=N:T=2489341]):0.000673[&&NHX:D=N:B=100:T=8825],((((ENSGFOP00000022131:0.015965[&&NHX:D=N:T=48883],ENSSCAP00000011543:0.017989[&&NHX:D=N:T=9135]):0.005354[&&NHX:D=N:B=100:T=9126],ENSTGUP00000012130:0.02239[&&NHX:D=N:T=59729]):0.005211[&&NHX:DD=Y:B=100:T=9126],ENSPMJP00000020154:0.031769[&&NHX:D=N:T=9157]):0.0011[&&NHX:D=N:B=13:T=9126],ENSFALP00000008821:0.024057[&&NHX:D=N:T=59894]):0.055526[&&NHX:D=N:B=13:T=9126]):0.017918[&&NHX:D=N:B=100:T=8825],(((ENSGALP00000027524:0.023757[&&NHX:D=N:T=9031],ENSMGAP00000015990:0.025887[&&NHX:D=N:T=9103]):0.000864[&&NHX:D=N:B=94:T=9005],ENSCJPP00005026171:0.031852[&&NHX:D=N:T=93934]):0.055074[&&NHX:D=N:B=94:T=9005],ENSAPLP00000007411:0.069477[&&NHX:D=N:T=8840]):0.021576[&&NHX:D=N:B=100:T=1549675]):0.027956[&&NHX:D=N:B=98:T=8825],ENSSCUP00000019773:0.055174[&&NHX:D=N:T=441894]):0.138375[&&NHX:D=N:B=98:T=8782],ENSCPRP00005008306:0.1287[&&NHX:D=N:T=8502]):0.016113[&&NHX:D=N:B=0:T=8492],((((ENSTMTP00000024650:0.004017[&&NHX:D=N:T=2587831],ENSTMTP00000012675:0.005315[&&NHX:D=N:T=2587831]):0.002859[&&NHX:D=Y:B=100:T=2587831],ENSCPBP00000004776:0.007644[&&NHX:D=N:T=8478]):0.005658[&&NHX:D=N:B=100:T=8476],(ENSGEVP00005002652:0.01601[&&NHX:D=N:T=1825980],ENSCABP00000011062:0.022245[&&NHX:D=N:T=106734]):0.009454[&&NHX:D=N:B=99:T=8487]):0.01978[&&NHX:D=N:B=99:T=8486],ENSPSIP00000012858:0.064659[&&NHX:D=N:T=13735]):0.046163[&&NHX:D=N:B=100:T=8464]):0.04067[&&NHX:D=N:B=0:T=1329799]):0.101687[&&NHX:D=N:B=9:T=32561]):0.107575[&&NHX:D=N:B=89:T=32524],(ENSXETP00000037057:0.302164[&&NHX:D=N:T=8364],ENSLLEP00000043860:0.366066[&&NHX:D=N:T=445787]):0.181688[&&NHX:D=N:B=96:T=8342]):0.09645[&&NHX:D=N:B=49:T=32523],ENSLACP00000008815:0.24746[&&NHX:D=N:T=7897]):0.045271[&&NHX:D=N:B=14:T=8287],((((((((((((((ENSTNIP00000002435:0.089877[&&NHX:D=N:T=99883],ENSTRUP00000015030:0.091412[&&NHX:D=N:T=31033]):0.146182[&&NHX:D=N:B=100:T=31031],ENSGACP00000015199:0.143397[&&NHX:D=N:T=69293]):0.009443[&&NHX:D=N:B=0:T=1489922],ENSSAUP00010031327:0.096966[&&NHX:D=N:T=8175]):0.004928[&&NHX:D=N:B=0:T=1489922],(ENSDLAP00005043188:0.096295[&&NHX:D=N:T=13489],ENSLBEP00000002832:0.154656[&&NHX:D=N:T=56723]):0.015316[&&NHX:D=N:B=15:T=1489922]):0.007374[&&NHX:D=N:B=0:T=1489922],(ENSSLUP00000030625:0.065993[&&NHX:D=N:T=283035],ENSCGOP00000037196:0.066502[&&NHX:D=N:T=56716]):0.014978[&&NHX:D=N:B=91:T=8111]):0.014192[&&NHX:DD=Y:B=0:T=1489922],(((ENSMAMP00000049017:0.112322[&&NHX:D=N:T=205130],ENSBSLP00000034562:0.168852[&&NHX:D=N:T=158456]):0.008315[&&NHX:D=N:B=0:T=1489892],((ENSSDUP00000015520:0.00513[&&NHX:D=N:T=41447],ENSSLDP00000006566:0.007791[&&NHX:D=N:T=1841481]):0.042577[&&NHX:D=N:B=100:T=8160],ENSLCAP00010030231:0.060104[&&NHX:D=N:T=8187]):0.016173[&&NHX:D=N:B=93:T=1489904]):0[&&NHX:D=N:B=0:T=1489872],(ENSSMAP00000010386:0.11135[&&NHX:D=N:T=52904],ENSATEP00000018320:0.126751[&&NHX:D=N:T=64144]):0.003595[&&NHX:D=N:B=14:T=1489872]):0.014963[&&NHX:DD=Y:B=0:T=1489872]):0.008717[&&NHX:D=N:B=0:T=1489872],(((ENSAOCP00000005723:0.022605[&&NHX:D=N:T=80972],ENSAPOP00000003431:0.032376[&&NHX:D=N:T=80966]):0.067976[&&NHX:D=N:B=100:T=30863],(((ENSMZEP00005015140:0.002522[&&NHX:D=N:T=106582],ENSHBUP00000022221:0.00276[&&NHX:D=N:T=8153]):0.005622[&&NHX:D=N:B=100:T=319058],ENSNBRP00000031193:0.014221[&&NHX:D=N:T=32507]):0.055295[&&NHX:D=N:B=100:T=318546],ENSACIP00000005496:0.085203[&&NHX:D=N:T=61819]):0.069808[&&NHX:D=N:B=97:T=8113]):0.006383[&&NHX:D=N:B=72:T=1489908],(((((((ENSPFOP00000001575:0.001877[&&NHX:D=N:T=48698],ENSPLAP00000026811:0.002682[&&NHX:D=N:T=48699]):0.011341[&&NHX:D=N:B=100:T=8080],ENSPREP00000018297:0.014432[&&NHX:D=N:T=8081]):0.009367[&&NHX:D=N:B=100:T=8080],ENSXMAP00000006983:0.020943[&&NHX:D=N:T=8083]):0.07372[&&NHX:D=N:B=100:T=586240],ENSFHEP00000010259:0.090262[&&NHX:D=N:T=8078]):0.010081[&&NHX:D=N:B=100:T=8087],ENSCVAP00000010146:0.166223[&&NHX:D=N:T=28743]):0.099285[&&NHX:D=N:B=100:T=8087],ENSKMAP00000010397:0.154786[&&NHX:D=N:T=37003]):0.018665[&&NHX:D=N:B=11:T=28738],((ENSORLP00000039367:0.012182[&&NHX:D=N:T=8090],ENSOSIP00000028295:0.023719[&&NHX:D=N:T=183150]):0.048352[&&NHX:D=N:B=100:T=8089],ENSOMEP00000001576:0.066811[&&NHX:D=N:T=30732]):0.195635[&&NHX:D=N:B=100:T=8089]):0.03392[&&NHX:D=N:B=9:T=1489913]):0.027302[&&NHX:D=N:B=0:T=1489908]):0.081822[&&NHX:D=N:B=0:T=1489872],ENSMMDP00005016864:0.115686[&&NHX:D=N:T=586833]):0.133158[&&NHX:D=N:B=0:T=123369],ENSGMOP00000010385:0.447969[&&NHX:D=N:T=8049]):0.04027[&&NHX:D=N:B=1:T=123368],(((ENSSSAP00000049301:0.003158[&&NHX:D=N:T=8030],ENSSTUP00000089299:0.005224[&&NHX:D=N:T=8032]):0.007814[&&NHX:D=N:B=100:T=8028],((ENSOTSP00005006826:0.003553[&&NHX:D=N:T=74940],ENSOKIP00005016504:0.004245[&&NHX:D=N:T=8019]):0.001513[&&NHX:D=N:B=95:T=8016],ENSOMYP00000096229:0.004581[&&NHX:D=N:T=8022]):0.012062[&&NHX:D=N:B=95:T=8016]):0.008081[&&NHX:D=N:B=79:T=504568],ENSHHUP00000013710:0.009428[&&NHX:D=N:T=62062]):0.220475[&&NHX:D=N:B=79:T=504568]):0.063675[&&NHX:D=N:B=0:T=1489388],((((ENSPNAP00000002089:0.088107[&&NHX:D=N:T=42514],ENSAMXP00000037719:0.141689[&&NHX:D=N:T=7994]):0.040456[&&NHX:D=N:B=100:T=1489739],ENSEEEP00000018632:0.175328[&&NHX:D=N:T=8005]):0.011488[&&NHX:D=N:B=52:T=186628],ENSIPUP00000019387:0.191507[&&NHX:D=N:T=7998]):0.130849[&&NHX:D=N:B=52:T=186628],((((ENSCCRP00000004504:0.013011[&&NHX:D=N:T=7962],ENSSGRP00000031158:0.015922[&&NHX:D=N:T=75366]):0.000854[&&NHX:D=N:B=100:T=2743694],ENSCARP00000056251:0.028035[&&NHX:D=N:T=7957]):0.0219[&&NHX:D=N:B=100:T=2743694],ENSSGRP00000071274:0.037074[&&NHX:D=N:T=75366]):0.035154[&&NHX:D=Y:B=100:T=2743694],ENSDARP00000099674:0.101043[&&NHX:D=N:T=7955]):0.247776[&&NHX:D=N:B=100:T=30727]):0.127786[&&NHX:D=N:B=98:T=186626]):0.062612[&&NHX:D=N:B=25:T=186625],(ENSPKIP00000013632:0.279788[&&NHX:D=N:T=1676925],ENSSFOP00015002218:0.291858[&&NHX:D=N:T=113540]):0.102594[&&NHX:D=N:B=88:T=41712]):0.110179[&&NHX:D=N:B=0:T=1489341],ENSLOCP00000009962:0.210021[&&NHX:D=N:T=7918]):0.138094[&&NHX:D=N:B=2:T=41665],ENSECRP00000005112:0.560007[&&NHX:D=N:T=27687]):0.12002[&&NHX:D=N:B=55:T=7898]):0.072614[&&NHX:D=N:B=3:T=117571],ENSCMIP00000046776:0.395803[&&NHX:D=N:T=7868]):0.1[&&NHX:D=N:B=4:T=7776],ENSEBUP00000009898:0.958294[&&NHX:D=N:T=7764]):0.1[&&NHX:D=N:B=0:T=7742];\",\n            \"nhx2\" : \"((((POP23a_CIOIN_ENSCING00000016202,POP23b_CIOIN_ENSCING00000016169)[&&NHX:Ev=duplication],POP23_CIOSA_ENSCSAVG00000000248),((POP23a_BRAFL_C3ZMF1,POP23b_BRAFL_121417)[&&NHX:Ev=duplication],(((POP3_ORYLA_ENSORLG00000019669,POP3_GASAC_ENSGACG00000014023,POP3_DANRE_Q6JWW1),(POP3_XENTR_B1H1F6,(POP3_CHICK_Q9DG25,(POP3_ORNAN_ENSOANG00000004179,POP3_MONDO_ENSMODG00000018033,((POP3_MOUSE_Q9ES81,POP3_RAT_Q3BCU3),POP3_RABIT_ENSOCUG00000025973,POP3_MACMU_ENSMMUG00000014473,POP3_HUMAN_Q9HBV1))))),(((POP2_GASAC_ENSGACG00000001420,POP2_ORYLA_ENSORLG00000008627,POP2_TAKRU_ENSTRUG00000015933),POP2_DANRE_ENSDARG00000069922),POP2_XENTR_ENSXETG00000018064,(((POP2_TAEGU_ENSTGUG00000013383,POP2_CHICK_Q6T9Z5),POP2_ANOCA_ENSACAG00000003557),((POP2_MACEU_ENSMEUG00000015825,POP2_MONDO_ENSMODG00000018205),((POP2_RABIT_ENSOCUG00000009515,(POP2_RAT_Q6P722,POP2_MOUSE_Q9ES82)),(POP2_MACMU_ENSMMUG00000000905,POP2_HUMAN_Q9HBU9))))))[&&NHX:Ev=duplication])),((POP1_CIOSA_ENSCSAVG00000000247,POP1_CIOIN_ENSCING00000000496),((POP1_DANRE_Q5PQZ7,(POP1_ORYLA_ENSORLG00000019663,POP1_GASAC_ENSGACG00000014015,POP1_TAKRU_ENSORLG00000019663)),(POP1_XENTR_B1H1G2,(POP1_ANOCA_ENSACAG00000003910,(POP1_TAEGU_ENSTGUG00000012218,POP1_CHICK_Q9DG23)),POP1_ORNAN_ENSOANG00000004180,POP1_MONDO_ENSMODG00000018034,(POP1_RABIT_ENSOCUG00000016944,(POP1_RAT_Q3BCU4,POP1_MOUSE_Q9ES83),(POP1_HUMAN_Q8NE79,POP1_MACMU_ENSMMUG00000014471))))))[&&NHX:Ev=duplication];\",\n            \"rokas\" : \"(Schizosaccharomyces pombe:0.545914,(Saitoella complicata:0.57412,((Arthrobotrys oligospora:0.539923,((Parastagonospora nodorum:0.465825,(Xylona heveae:0.272728,(Coccidioides immitis:0.254443,Aspergillus nidulans:0.266048)1:0.18207)1:0.041547)1:0.0419986,((Botrytis cinerea:0.0493876,Sclerotinia sclerotiorum:0.0433921)1:0.237364,(Neurospora crassa:0.27673,Fusarium graminearum:0.291175)1:0.153952)1:0.127477)1:0.210957)1:0.198261,(((Lipomyces suomiensis NRRL Y-17356:0.234623,Lipomyces oligophaga NRRL Y-17247:0.370846)1:0.0775974,((Lipomyces japonicus NRRL Y-17848:0.3372,Lipomyces lipofer NRRL Y-11555:0.166258)1:0.0562401,(Lipomyces doorenjongii NRRL Y-27504:0.289327,(Lipomyces kononenkoae NRRL Y-11553:0.0897564,(Lipomyces starkeyi NRRL Y-11557:0.0198789,(Lipomyces mesembrius NRRL Y-27506:0.0193032,Lipomyces arxii NRRL Y-17921:0.0198748)1:0.00839469)1:0.0452686)1:0.113493)1:0.0365204)1:0.0522388)1:0.351588,(((Trigonopsis vinaria NRRL Y-5715:0.32117,Trigonopsis variabilis NRRL Y-1579:0.36434)1:0.434566,(Botryozyma nematodophila NRRL Y-17705:0.702864,(Tortispora starmeri NRRL Y-63665:0.502464,(Tortispora caseinolytica NRRL Y-17796:0.0396928,Tortispora ganteri NRRL Y-17035:0.0458542)1:0.458583)1:0.374135)1:0.158759)1:0.0771598,((((Nadsonia fulvescens var. elongata DSM 6958:0.0202083,Nadsonia fulvescens NRRL Y-12810:0.0176171)1:0.536297,(Candida hispaniensis NRRL Y-5580:0.422522,(Yarrowia bubula NRRL Y-63668:0.0502129,(Yarrowia keelungensis JCM 14894:0.0300806,(Yarrowia lipolytica:0.0264517,(Yarrowia divulgata NRRL Y-63741:0.00987236,Yarrowia deformans JCM 1694:0.0108765)1:0.0239202)1:0.00862142)1:0.0258247)1:0.296485)1:0.408355)1:0.0777756,((Middelhovenomyces tepae NRRL Y-17670:0.443049,((Saprochaete clavata:0.309611,Magnusiomyces tetrasperma NRRL Y-7288:0.34292)1:0.186613,(Galactomyces candidus Phaff 72-186:0.207517,(Dipodascus geniculatus NRRL Y-17628:0.0852517,Dipodascus albidus NRRL Y-12859:0.0862487)1:0.229904)1:0.189193)1:0.149192)1:0.0518788,(((Deakozyma indianensis NRRL YB-1937:0.184702,Candida incommunis NRRL Y-17085:0.20747)1:0.543275,((Wickerhamiella infanticola DS02:0.528425,Wickerhamiella cacticola NRRL Y-27362:0.692381)1:0.075832,(Wickerhamiella versatilis JCM 5958:0.645274,(Wickerhamiella domercqiae:0.626221,(Candida apicola NRRL Y-50540:0.434359,Starmerella bombicola JCM 9596:0.383847)1:0.356841)1:0.0846685)1:0.155283)1:0.413088)1:0.0954418,(((Sugiyamaella lignohabitans CBS 10342:0.411366,(Diddensiella caesifluorescens NRRL Y-48781:0.336519,Spencermartinsiella europaea NRRL Y-48265:0.41893)1:0.0421993)1:0.0384646,(Groenewaldozyma salmanticensis NRRL Y-17090:0.561259,(Zygoascus meyerae NRRL Y-17319:0.366231,Zygoascus ofunaensis NRRL Y-10998:0.397239)1:0.214422)1:0.0535895)1:0.0458319,(Blastobotrys muscicola NRRL Y-7993:0.458918,((Blastobotrys mokoenaii NRRL Y-27120:0.362928,(Blastobotrys proliferans NRRL Y-17577:0.228429,Blastobotrys nivea NRRL Y-17581:0.269851)1:0.158495)1:0.079695,(Blastobotrys serpentis NRRL Y-48249:0.327946,((Blastobotrys raffinosifermentans:0.0217085,Blastobotrys adeninivorans:0.018147)1:0.222596,(Blastobotrys peoriensis NRRL YB-2290:0.169572,Blastobotrys americana NRRL Y-6844:0.161305)1:0.170868)1:0.173794)1:0.0621326)1:0.0484003)1:0.062313)1:0.0537951)1:0.0469088)1:0.0867807)1:0.0634323,((Alloascoidea hylecoeti JCM 7604:0.573891,(Sporopachydermia lactativora NRRL Y-11591:0.293628,Sporopachydermia quercuum JCM 9486:0.229415)1:0.463025)1:0.0601744,((((Ascoidea asiatica JCM 7603:0.367013,Ascoidea rubescens:0.321961)1:0.263464,(Saccharomycopsis capsularis NRRL Y-17639:0.190582,Saccharomycopsis malanga JCM 7620:0.198358)1:0.40498)1:0.163324,((Candida ponderosae NRRL YB-2307:0.38206,((Starmera quercuum NRRL YB-4281:0.250343,(Starmera amethionina NRRL Y-10978:0.208149,Candida stellimalicola NRRL Y-17912:0.200412)1:0.200109)1:0.0953975,((Wickerhamomyces ciferrii NRRL Y-1031:0.190972,Wickerhamomyces anomalus:0.135192)1:0.110022,((Wickerhamomyces hampshirensis NRRL YB-4128:0.251418,(Candida freyschussii:0.200517,((Cyberlindnera xylosilytica NRRL YB-2097:0.171593,(Cyberlindnera fabianii JCM 3601:0.173452,(Cyberlindnera petersonii NRRL YB-3808:0.146495,(Cyberlindnera americana NRRL Y-2156:0.124404,Candida mycetangii NRRL Y-6843:0.138201)1:0.021936)1:0.0555066)1:0.0255677)1:0.104307,((Cyberlindnera mrakii NRRL Y-1364:0.0362246,(Cyberlindnera saturnus NRRL Y-17396:0.0192395,Cyberlindnera suaveolens NRRL Y-17391:0.0161438)1:0.0136523)1:0.121465,((Cyberlindnera jadinii NRRL Y-1542:0.216631,Candida vartiovaarae:0.174307)1:0.0287187,(Cyberlindnera maclurae NRRL Y-5377:0.0723855,Cyberlindnera misumaiensis NRRL Y-17389:0.0590068)1:0.157678)1:0.0254444)1:0.128382)1:0.0244259)1:0.0399877)1:0.0690847,((Wickerhamomyces alni NRRL Y-11625:0.198181,(Wickerhamomyces canadensis NRRL Y-1888:0.0181265,Wickerhamomyces sp.:0.0258553)1:0.152098)1:0.104484,(Wickerhamomyces bovis NRRL YB-4184:0.238507,((Barnettozyma hawaiiensis NRRL Y-27270:0.0769162,(Barnettozyma californica NRRL Y-17395:0.0637227,Barnettozyma populi NRRL Y-12728:0.069715)1:0.012496)1:0.171001,((Barnettozyma pratensis NRRL Y-12696:0.134345,Barnettozyma salicaria NRRL Y-6780:0.201535)1:0.0253729,(Candida montana NRRL Y-17326:0.18273,((Phaffomyces thermotolerans NRRL Y-11709:0.0347558,Candida orba NRRL Y-27336:0.0268361)1:0.0450689,(Phaffomyces opuntiae NRRL Y-11707:0.0227806,Phaffomyces antillensis NRRL Y-12881:0.0381186)1:0.0503677)1:0.136412)1:0.0550969)1:0.0252933)1:0.148508)1:0.0456798)1:0.0515684)1:0.0559147)1:0.0396837)1:0.0394501)1:0.188948,(((Hanseniaspora osmophila NRRL Y-1613:0.0533805,Hanseniaspora vineae:0.0482455)1:0.375889,((Hanseniaspora singularis:0.230831,Hanseniaspora valbyensis NRRL Y-1626:0.170847)1:0.0889552,(Kloeckera hatyaiensis:0.149005,(Hanseniaspora pseudoguilliermondii:0.11701,(Hanseniaspora uvarum:0.0603265,Hanseniaspora clermontiae NRRL Y-27515:0.0811774)1:0.037012)1:0.118708)1:0.169466)1:0.805928)1:0.306057,((((Kluyveromyces aestuarii NRRL YB-4510:0.247878,(Kluyveromyces marxianus CBS6556:0.14186,(Kluyveromyces lactis NRRL Y-1140:0.0794227,Kluyveromyces dobzhanskii NRRL Y-1974:0.107991)1:0.0644926)1:0.119991)1:0.234335,((Eremothecium coryli CBS 5749:0.245286,Eremothecium sinecaudum ATCC 58844:0.262753)1:0.0575176,(Eremothecium cymbalariae DBVPG 7215:0.226178,(Eremothecium gossypii ATCC 10895:0.046311,Ashbya aceri:0.0356574)1:0.257241)1:0.0330026)1:0.17076)1:0.0607471,(Lachancea kluyveri:0.221801,((Lachancea fermentati:0.125926,Lachancea cidri:0.116386)1:0.108281,(Lachancea mirantina:0.360697,((Lachancea waltii:0.155994,(Lachancea quebecensis:0.0412753,Lachancea thermotolerans CBS 6340:0.0381374)1:0.122374)1:0.048069,(Lachancea nothofagi:0.125696,(Lachancea dasiensis:0.187333,(Lachancea meyersii CBS 8951:0.0930237,(Lachancea fantastica:0.0613265,Lachancea lanzarotensis CBS 12615:0.0662562)1:0.080869)1:0.0868343)1:0.0232028)1:0.0796876)1:0.11944)1:0.0368276)1:0.0869217)1:0.0544235)1:0.046723,(((Zygosaccharomyces rouxii CBS 732:0.143413,(Zygosaccharomyces kombuchaensis NRRL YB-4811:0.0926322,(Zygosaccharomyces bisporus NRRL Y-12626:0.083556,Zygosaccharomyces bailii:0.0939337)1:0.0304452)1:0.0574531)1:0.176842,((Zygotorulaspora florentina NRRL Y-1560:0.131232,Zygotorulaspora mrakii NRRL Y-12654:0.168677)1:0.11848,(Torulaspora microellipsoides:0.15825,(Torulaspora maleeae CBS 10694:0.172696,(Torulaspora delbrueckii:0.0799621,(Torulaspora franciscae NRRL Y-17532:0.0354865,Torulaspora pretoriensis NRRL Y-17251:0.0343667)1:0.0834631)1:0.0804511)1:0.0953121)1:0.0235795)1:0.0481102)1:0.0871222,(((Tetrapisispora blattae:0.271746,Yueomyces sinensis NRRL Y-17406:0.347888)1:0.216158,(Vanderwaltozyma polyspora:0.261306,(Tetrapisispora iriomotensis NRRL Y-27309:0.150965,(Tetrapisispora phaffii CBS 4417:0.100885,(Tetrapisispora namnaoensis NRRL Y-27982:0.0531639,Tetrapisispora fleetii NRRL Y-27350:0.0682282)1:0.0667913)1:0.0911273)1:0.204252)1:0.0968006)1:0.049682,((((Nakaseomyces bacillisporus CBS 7720:0.318907,_Candida_ castellii CBS 4332:0.44969)1:0.119593,(_Candida_ glabrata CBS 138:0.19376,(_Candida_ bracarensis CBS 10154:0.0791127,(_Candida_ nivariensis CBS 9983:0.0591139,Nakaseomyces delphensis CBS 2170:0.1071)1:0.0282267)1:0.118561)1:0.24292)1:0.043942,((Saccharomyces uvarum:0.01864,Saccharomyces eubayanus:0.0211527)1:0.0363173,(Saccharomyces arboricola:0.0587131,(Saccharomyces kudriavzevii:0.0570128,(Saccharomyces mikatae IFO 1815:0.0529368,(Saccharomyces paradoxus:0.0250749,Saccharomyces cerevisiae S288C:0.0325262)1:0.0191755)1:0.0192692)1:0.00934172)1:0.0155583)1:0.277733)1:0.0304696,((Naumovozyma dairenensis:0.244773,Naumovozyma castellii:0.223994)1:0.116605,(((Kazachstania africana CBS 2517:0.302329,Kazachstania viticola NRRL Y-27206:0.304357)1:0.0420759,((Kazachstania turicensis NRRL Y-48834:0.232443,Kazachstania kunashirensis NRRL Y-27209:0.160829)1:0.120327,(Kazachstania spencerorum NRRL Y-17920:0.238158,Kazachstania rosinii NRRL Y-17919:0.204563)1:0.0374176)1:0.0694195)1:0.0333483,((Kazachstania intestinalis NRRL Y-48847:0.427517,Kazachstania martiniae NRRL Y-409:0.262551)1:0.0379646,((Kazachstania naganishii CBS 8797:0.335856,Kazachstania bromeliacearum NRRL Y-48836:0.198593)1:0.0338563,(Kazachstania taianensis NRRL Y-48846:0.27887,((Kazachstania transvaalensis NRRL Y-17245:0.111612,Kazachstania yakushimaensis NRRL Y-48837:0.0900106)1:0.290831,(Kazachstania siamensis NRRL Y-48842:0.114965,(Kazachstania unispora NRRL Y-1556:0.0645858,(Kazachstania solicola NRRL Y-27207:0.0241196,Kazachstania aerobia NRRL Y-27976:0.0305719)1:0.0678491)1:0.059458)1:0.1733)1:0.0384928)1:0.0508605)1:0.0761265)1:0.0382292)1:0.0669668)1:0.036691)1:0.0374781)1:0.0230192)1:0.115608)1:0.127779)1:0.342113)1:0.0913588)1:0.0347262,(((Pachysolen tannophilus NRRL Y-2460:0.313751,((Peterozyma xylosa NRRL Y-12939:0.0402272,Peterozyma toletana NRRL YB-4247:0.0398928)1:0.321195,(Nakazawaea peltata JCM 9829:0.323069,Nakazawaea holstii NRRL Y-2155:0.206923)1:0.167264)1:0.0471457)1:0.163091,(((Citeromyces siamensis NRRL Y-27975:0.199314,(Citeromyces hawaiiensis NRRL Y-11581:0.0676646,Citeromyces matritensis NRRL Y-2407:0.0674657)1:0.134721)1:0.41892,(Komagataella pastoris:0.0617151,(Komagataella populi NRRL YB-455:0.0093125,Komagataella pseudopastoris NRRL Y-27603:0.00934262)1:0.0520784)1:0.548169)1:0.0572955,(Kuraishia ogatae NRRL Y-48474:0.423004,((Kuraishia capsulata:0.167402,Kuraishia molischiana NRRL Y-27899:0.174477)1:0.340405,(Candida boidinii JCM 9604:0.409104,((Ogataea methylivora NRRL Y-17250:0.262112,(Ogataea ramenticola NRRL YB-1985:0.331126,(Candida succiphila JCM 9445:0.377882,Ogataea naganishii NRRL Y-7654:0.377342)1:0.0486474)1:0.0581327)1:0.0742491,((((Ogataea nitratoaversa NRRL Y-48449:0.140695,Ogataea pilisensis NRRL Y-27598:0.121524)1:0.101152,(Candida arabinofermentans NRRL YB-2248:0.23367,(Ogataea trehalophila NRRL Y-6781:0.0634693,Ogataea methanolica JCM 10240:0.0635138)1:0.143303)1:0.0364214)1:0.0681563,((Ogataea trehaloabstinens NRRL Y-27595:0.240241,Ogataea populi-albae NRRL Y-48632:0.19583)1:0.109824,((Ogataea zsoltii NRRL Y-27601:0.106801,(Ogataea glucozyma NRRL YB-2185:0.125497,(Ogataea henricii NRRL YB-2194:0.0652918,Ogataea pini NRRL Y-11528:0.0832313)1:0.0564285)1:0.0349258)1:0.117879,((Ogataea minuta NRRL Y-411:0.0815234,Ogataea nonfermentans NRRL YB-2203:0.0649159)1:0.0858242,(Ogataea kodamae NRRL Y-17234:0.276318,(Ogataea philodendri NRRL Y-7210:0.16107,(Ogataea polymorpha NCYC 495 leu1.1:0.0237039,Ogataea parapolymorpha:0.0123489)1:0.137202)1:0.0329933)1:0.0274717)1:0.178127)1:0.0484727)1:0.0552351)1:0.0549412,((Ambrosiozyma maleeae NRRL Y-63635:0.258273,((Ambrosiozyma kashinagacola JCM 15019:0.196206,(Ambrosiozyma pseudovanderkliftii NRRL Y-63632:0.103065,Ambrosiozyma vanderkliftii NRRL Y-63633:0.0839667)1:0.0913495)1:0.0409106,(Ambrosiozyma monospora JCM 7599:0.234639,(Ambrosiozyma oregonensis NRRL Y-6106:0.0826625,(Ambrosiozyma philentoma NRRL Y-7523:0.0357081,Ambrosiozyma ambrosiae NRRL Y-7524:0.0705379)1:0.026201)1:0.130669)1:0.03731)1:0.0668046)1:0.117317,((Brettanomyces custersianus NRRL Y-6653:0.31306,(Brettanomyces anomalus:0.0854333,Brettanomyces bruxellensis CBS 2499:0.0907076)1:0.224162)1:0.282927,((Kregervanrija fluxuum NRRL YB-4273:0.0355143,Kregervanrija delftensis NRRL Y-7119:0.0311594)1:0.225534,((Martiniozyma abiesophila NRRL Y-11514:0.320478,((Saturnispora mendoncae NRRL Y-11515:0.161201,Saturnispora silvae NRRL Y-6725:0.331441)1:0.105865,(Saturnispora saitoi NRRL Y-6671:0.0911533,(Saturnispora zaruensis NRRL Y-7008:0.0580631,(Saturnispora dispora NRRL Y-1447:0.031157,(Saturnispora serradocipensis NRRL Y-48717:0.0165811,Saturnispora hagleri NRRL Y-27828:0.0129394)1:0.0233711)1:0.0308985)1:0.0776961)1:0.125167)1:0.181222)1:0.143022,((Candida sorboxylosa JCM 1536:0.372151,Pichia terricola NRRL YB-4310:0.256406)1:0.0700447,(Pichia membranifaciens KS47-1:0.213499,((Pichia heedii NRRL Y-10967:0.130518,Pichia nakasei NRRL Y-7686:0.123153)1:0.187264,((Pichia norvegensis NRRL Y-7687:0.307748,Pichia kudriavzevii:0.274245)1:0.047663,(Pichia occidentalis NRRL Y-7552:0.190823,Pichia exigua NRRL Y-10920:0.216283)1:0.0273444)1:0.0202107)1:0.0282289)1:0.0444849)1:0.151672)1:0.0978808)1:0.150478)1:0.0843851)1:0.0446598)1:0.111139)1:0.0367086)1:0.137306)1:0.0425494)1:0.0600483)1:0.0499527)1:0.103505,(Babjeviella inositovora NRRL Y-12698:0.594547,((Cephaloascus albidus:0.18956,Cephaloascus fragrans:0.210025)1:0.210658,((Candida schatavii NRRL Y-17078:0.29428,(Candida fragi NRRL Y-17910:0.0714581,Kurtzmaniella cleridarum NRRL Y-48386:0.0735961)1:0.306068)1:0.108229,(((Candida athensensis NRRL Y-27644:0.132895,(Meyerozyma guilliermondii ATCC 6260:0.0289919,(Candida carpophila JCM 9396:0.0151985,Meyerozyma caribbica:0.0185042)1:0.0206601)1:0.0934175)1:0.329014,(Candida ascalaphidarum NRRL Y-27908:0.414658,((Candida gorgasii NRRL Y-27707:0.221357,Candida tammaniensis NRRL Y-8257:0.186332)1:0.101116,(Yamadazyma scolyti NRRL Y-5512:0.270025,(Yamadazyma tenuis:0.191175,(Yamadazyma nakazawae NRRL Y-7903:0.0860963,Yamadazyma philogaea NRRL Y-7813:0.119211)1:0.13583)1:0.0698957)1:0.0621763)1:0.179539)1:0.0478873)1:0.0252656,(((Millerozyma acaciae JCM 10732:0.318905,(Debaryomyces maramus NRRL Y-2171:0.126252,(Debaryomyces nepalensis NRRL Y-7108:0.107212,(Debaryomyces hansenii:0.0420625,(Debaryomyces prosopidis NRRL Y-27369:0.0489959,(Debaryomyces subglobosus NRRL Y-6666:0.0269918,Debaryomyces fabryi NRRL Y-17914:0.0215588)1:0.00458487)1:0.0217112)1:0.0474478)1:0.0562497)1:0.0791464)1:0.0717927,((Priceomyces carsonii NRRL YB-4275:0.202197,(Priceomyces medius NRRL Y-7122:0.126528,(Priceomyces haplophilus JCM 1635:0.134127,Priceomyces castillae NRRL Y-7501:0.0664317)1:0.052666)1:0.106057)1:0.170928,(((Wickerhamia fluorescens JCM 1821:0.309207,(Teunomyces gatunensis NRRL Y-48064:0.139302,(Teunomyces cretensis NRRL Y-27777:0.0373482,Teunomyces kruisii NRRL Y-17087:0.0354532)1:0.0674172)1:0.152253)1:0.0395823,((Suhomyces pyralidae NRRL Y-27085:0.207777,(Suhomyces tanzawaensis NRRL Y-17324:0.114461,(Suhomyces canberraensis NRRL YB-2417:0.126395,Suhomyces emberorum NRRL Y-27606:0.157814)1:0.0330656)1:0.074523)1:0.0880461,(Aciculoconidium aculeatum NRRL YB-4298:0.278681,(Kodamaea laetipori NRRL Y-27713:0.166081,(Kodamaea ohmeri NRRL Y-1932:0.120016,Candida restingae NRRL Y-27358:0.122045)1:0.175941)1:0.0561324)1:0.13211)1:0.0306706)1:0.0320665,((Scheffersomyces stipitis:0.162145,Scheffersomyces lignosus JCM 9837:0.141854)1:0.103183,(((Spathaspora hagerdaliae:0.0274865,Spathaspora gorwiae UFMG-CM-Y312:0.0270552)1:0.185213,(Spathaspora passalidarum NRRL Y-27907:0.0756431,(Spathaspora arborariae:0.0863436,Spathaspora girioi:0.103206)1:0.0276678)1:0.158335)1:0.0543878,((Candida corydali NRRL Y-27910:0.321211,(Lodderomyces elongisporus:0.271322,(Candida parapsilosis:0.0662414,Candida orthopsilosis:0.0591273)1:0.173632)1:0.103296)1:0.0375885,((Candida dubliniensis CD36:0.0370067,Candida albicans WO-1:0.0309348)1:0.126495,(Candida tropicalis ATCC 200956 MY1012:0.0573369,Candida sojae GF41:0.0691758)1:0.118022)1:0.0968903)1:0.0675366)1:0.119154)1:0.0332128)1:0.0611332)1:0.0307845)1:0.0194503,(((Hyphopichia homilentoma JCM 1507:0.231014,Hyphopichia burtonii NRRL Y-1933:0.195628)1:0.0539724,(Danielozyma ontarioensis NRRL YB-1246:0.28361,(Candida gotoi NRRL Y-27225:0.0656244,(Hyphopichia heimii NRRL Y-7502:0.0226493,Candida rhagii NRRL Y-2594:0.0238606)1:0.068766)1:0.157449)1:0.0369338)1:0.0713511,((Candida heveicola NRRL Y-48716:0.134205,_Candida_ auris:0.137532)1:0.207365,(Candida oregonensis NRRL Y-5850:0.222047,(((Candida intermedia JCM 1607:0.130323,Candida blattae NRRL Y-27698:0.127583)1:0.100258,(Clavispora lusitaniae:0.147865,Clavispora fructus NRRL Y-17072:0.15848)1:0.137841)1:0.0302907,((Candida wancherniae NRRL Y-48709:0.246543,(Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993:0.172847,Candida golubevii NRRL Y-48707:0.168165)1:0.0922754)1:0.0530619,(Candida hawaiiana:0.166731,(Metschnikowia kipukae UWOPS 00-669.2:0.116121,((Metschnikowia hibisci UWOPS 95-797.2:0.0472722,(Metschnikowia shivogae UWOPS 04-310.1:0.0168883,Metschnikowia aberdeeniae SUB 05-213.1:0.0146631)1:0.0315668)1:0.0981931,((Metschnikowia proteae:0.00747509,Metschnikowia drakensbergensis:0.00548386)1:0.0718813,((Metschnikowia arizonensis UWOPS 99-103.4:0.0768031,(Metschnikowia similis UWOPS 03-133.4:0.0158634,(Metschnikowia dekortorum:0.00848135,Metschnikowia bowlesiae:0.00946469)1:0.00906119)1:0.100881)1:0.019975,((Metschnikowia kamakouana UWOPS 04-112.5:0.0238126,(Metschnikowia hawaiiensis UWOPS 87-2203.2:0.0113058,(Metschnikowia hamakuensis UWOPS 04-199.1:0.0101785,Metschnikowia mauinuiana UWOPS 04-190.1:0.00865049)1:0.00277958)1:0.0283861)1:0.0126143,((Candida ipomoeae UWOPS 10-104.1:0.0100707,Metschnikowia borealis SUB 99-207.1:0.0167867)1:0.00210267,((Metschnikowia lochheadii UWOPS 99-661.1:0.00996666,(Metschnikowia matae var. matae UFMG-CM-Y391A:0.00424069,Metschnikowia matae var. maris UFMG-CM-Y397T:0.00348643)1:0.00958686)1:0.00918633,(Metschnikowia continentalis UWOPS 95-402.1:0.00666829,(Metschnikowia santaceciliae UWOPS 01-517a1:0.00622675,Metschnikowia cerradonensis:0.00638518)1:0.00224705)1:0.00605543)1:0.00228128)1:0.0140057)1:0.0477555)1:0.0216892)1:0.0216014)1:0.0448311)1:0.0790685)1:0.148907)1:0.104645)1:0.0330591)1:0.0346064)1:0.191308)1:0.0501198)1:0.0235663)1:0.0497414)1:0.249136)1:0.0750128)1:0.0732652)1:0.049717)1:0.219066)1:0.165959)1:0.126267)1:0.0731174)1:0.168976)1:0.15046)1:0.545914);\",\n            \"r2t\" : \"(Schizosaccharomyces pombe:0.126204,(Saitoella complicata:0.0885746,((Arthrobotrys oligospora:0.0619566,(((Botrytis cinerea:0.0159599,Sclerotinia sclerotiorum:0.0144928)100:0.0963903,(Fusarium graminearum:0.0510591,(Neurospora crassa:0.0739745,Thermothelomyces heterothallicus:0.0683393)100:0.0362615)100:0.0584987)100:0.0447412,(((Zymoseptoria tritici:0.0711361,Passalora fulva:0.0715012)100:0.0977923,(Curvularia lunata:0.0396482,Parastagonospora nodorum:0.0402995)100:0.0997238)100:0.0445184,(Xylona heveae:0.0827906,(Coccidioides immitis:0.084686,(Aspergillus glaucus:0.0668904,(Aspergillus nidulans:0.0401227,Aspergillus oryzae:0.0447877)100:0.0146822)100:0.0489525)100:0.0540695)100:0.0225032)100:0.0234296)97:0.0417394)100:0.0878736,((Lipomyces japonicus NRRL Y-17848:0.083055,((Lipomyces suomiensis NRRL Y-17356:0.063608,Lipomyces oligophaga NRRL Y-17247:0.0762265)100:0.0217226,(Lipomyces doorenjongii NRRL Y-27504:0.0786482,(Lipomyces lipofer NRRL Y-11555:0.0650201,(Lipomyces kononenkoae NRRL Y-11553:0.0459803,((Lipomyces starkeyi NRRL Y-11557:0.00681505,Lipomyces starkeyi:0.00528117)100:0.0119879,(Lipomyces mesembrius NRRL Y-27506:0.0232923,Lipomyces arxii NRRL Y-17921:0.0349869)100:0.00929258)100:0.0178152)100:0.0224125)100:0.0117255)100:0.0112742)100:0.0161427)100:0.0443967,(((Trigonopsis variabilis NRRL Y-1579:0.0918385,Trigonopsis vinaria NRRL Y-5715:0.0778916)100:0.0634075,(Botryozyma nematodophila NRRL Y-17705:0.126145,(Tortispora starmeri NRRL Y-63665:0.0822969,(Tortispora caseinolytica NRRL Y-17796:0.0293182,Tortispora ganteri NRRL Y-17035:0.0348557)100:0.0511304)100:0.0413347)100:0.0281241)100:0.0197302,(((Middelhovenomyces tepae NRRL Y-17670:0.111319,((Galactomyces candidus Phaff 72-186:0.0669059,(Dipodascus geniculatus NRRL Y-17628:0.0585418,Dipodascus albidus NRRL Y-12859:0.0802071)100:0.032647)100:0.0352005,((Saprochaete clavata:0.0573717,(Magnusiomyces capitatus:0.0225681,Magnusiomyces capitatus:0.00343673)100:0.0266914)100:0.0426538,(Magnusiomyces tetrasperma NRRL Y-7288:0.0909393,(Magnusiomyces ingens:0.00426038,Magnusiomyces ingens:0.00454468)100:0.0594328)100:0.0145665)100:0.037234)100:0.0271195)100:0.0160277,(((Candida incommunis NRRL Y-17085:0.0714356,Deakozyma indianensis NRRL YB-1937:0.0665043)100:0.0862172,((Wickerhamiella infanticola DS02:0.112297,Wickerhamiella cacticola NRRL Y-27362:0.121855)100:0.0593741,(Candida hispaniensis NRRL Y-5580:0.0908408,((Yarrowia sp. JCM 30694:0.00421429,Yarrowia bubula NRRL Y-63668:0.0066085)100:0.0141797,((Yarrowia deformans JCM 1694:0.00474947,Yarrowia divulgata NRRL Y-63741:0.00788674)100:0.00896605,(Yarrowia lipolytica:0.00855678,(Yarrowia sp. JCM 30696:0.00457866,(Yarrowia sp. JCM 30695:0.00109815,Yarrowia keelungensis JCM 14894:0.000746909)100:0.00339822)100:0.00776074)100:0.0030877)100:0.00797457)100:0.0687327)100:0.084079)99:0.0269638)99:0.0226604,(((Groenewaldozyma salmanticensis NRRL Y-17090:0.11507,(Zygoascus ofunaensis NRRL Y-10998:0.0905002,(Zygoascus hellenicus NRRL Y-7136:0.0177705,Zygoascus meyerae NRRL Y-17319:0.033743)100:0.0524429)100:0.0360027)100:0.0174588,((Spencermartinsiella europaea NRRL Y-48265:0.0911582,Diddensiella caesifluorescens NRRL Y-48781:0.0884185)100:0.0161105,(Sugiyamaella valdiviana:0.0815797,(Sugiyamaella americana NRRL YB-2067:0.0856077,Sugiyamaella lignohabitans CBS 10342:0.0351246)100:0.0195916)100:0.0261745)100:0.0136807)100:0.0169933,(Blastobotrys muscicola NRRL Y-7993:0.11487,((Blastobotrys mokoenaii NRRL Y-27120:0.0956722,(Blastobotrys attinorum Y-27639:0.0521706,(Blastobotrys nivea NRRL Y-17581:0.0858854,Blastobotrys proliferans NRRL Y-17577:0.0888617)100:0.0122257)100:0.014012)100:0.0192743,(Blastobotrys serpentis NRRL Y-48249:0.10963,((Blastobotrys americana NRRL Y-6844:0.0632957,Blastobotrys peoriensis NRRL YB-2290:0.056484)100:0.0312416,(Blastobotrys adeninivorans:0.0201089,Blastobotrys raffinosifermentans:0.016445)100:0.0638897)100:0.0369131)100:0.0165191)100:0.0160658)100:0.0187613)100:0.0218206)99:0.0218424)99:0.0323467,((Nadsonia fulvescens NRRL Y-12810:0.0431276,Nadsonia fulvescens var. elongata DSM 6958:0.0290928)100:0.100074,((Alloascoidea hylecoeti JCM 7604:0.142779,(Sporopachydermia lactativora NRRL Y-11591:0.0716173,Sporopachydermia quercuum JCM 9486:0.060207)100:0.0533148)77:0.0184655,(((Ascoidea asiatica JCM 7603:0.0909876,Ascoidea rubescens:0.0923764)100:0.0555868,(Saccharomycopsis fermentans NRRL Y-17710:0.0670507,(Saccharomycopsis malanga JCM 7620:0.0537866,Saccharomycopsis capsularis NRRL Y-17639:0.0726377)100:0.0293327)100:0.0505221)100:0.0351169,((((Candida ponderosae NRRL YB-2307:0.116821,(Starmera quercuum NRRL YB-4281:0.0867524,(Candida stellimalicola NRRL Y-17912:0.0710683,Starmera amethionina NRRL Y-10978:0.0660149)100:0.038032)100:0.024918)91:0.0146313,((Wickerhamomyces anomalus:0.0497049,Wickerhamomyces ciferrii NRRL Y-1031:0.0512548)100:0.0264792,(((Wickerhamomyces alni NRRL Y-11625:0.0754478,(Wickerhamiella azyma NRRL Y-17067:0.0310146,Wickerhamomyces canadensis NRRL Y-1888:0.0326725)100:0.0453877)100:0.0288606,(Wickerhamomyces bovis NRRL YB-4184:0.083978,((Barnettozyma hawaiiensis NRRL Y-27270:0.0506112,(Barnettozyma populi NRRL Y-12728:0.0521714,Barnettozyma californica NRRL Y-17395:0.0407995)100:0.00921085)100:0.0371517,((Barnettozyma pratensis NRRL Y-12696:0.0622423,Barnettozyma salicaria NRRL Y-6780:0.069559)100:0.0123131,(Candida montana NRRL Y-17326:0.0751889,((Candida orba NRRL Y-27336:0.0339559,Phaffomyces thermotolerans NRRL Y-11709:0.0339438)100:0.0210789,(Phaffomyces antillensis NRRL Y-12881:0.0392326,Phaffomyces opuntiae NRRL Y-11707:0.0320823)100:0.0209823)100:0.0419267)100:0.0220956)100:0.0105821)100:0.0313017)100:0.0153705)100:0.0180182,((Wickerhamomyces hampshirensis NRRL YB-4128:0.0842166,Candida freyschussii:0.0702627)100:0.0145882,(((Cyberlindnera xylosilytica NRRL YB-2097:0.0615196,Cyberlindnera fabianii JCM 3601:0.0530417)100:0.011541,(Cyberlindnera petersonii NRRL YB-3808:0.0626946,(Candida mycetangii NRRL Y-6843:0.0582128,Cyberlindnera americana NRRL Y-2156:0.0598929)100:0.0114685)100:0.0159979)100:0.0264469,((Cyberlindnera maclurae NRRL Y-5377:0.0526604,Cyberlindnera misumaiensis NRRL Y-17389:0.0442506)100:0.0440499,(Cyberlindnera jadinii NRRL Y-1542:0.0725383,(Candida vartiovaarae:0.0625927,(Cyberlindnera mrakii NRRL Y-1364:0.0367754,(Cyberlindnera saturnus NRRL Y-17396:0.0287399,Cyberlindnera suaveolens NRRL Y-17391:0.0232996)100:0.0160669)100:0.0292767)100:0.0102841)100:0.0092162)100:0.0263359)100:0.0154825)100:0.0219838)100:0.0164339)95:0.0119649)100:0.0468189,((Saccharomycodes ludwigii UTAD17:0.114355,((Hanseniaspora vineae:0.0341913,Hanseniaspora osmophila NRRL Y-1613:0.0381317)100:0.0685352,((Hanseniaspora singularis:0.0663886,Hanseniaspora valbyensis NRRL Y-1626:0.0517474)100:0.0155812,(Kloeckera hatyaiensis:0.0523116,(Hanseniaspora pseudoguilliermondii:0.0562921,(Hanseniaspora uvarum:0.0346921,Hanseniaspora clermontiae NRRL Y-27515:0.0475276)100:0.0145255)100:0.0211695)100:0.0279143)100:0.114557)100:0.0384264)100:0.0348094,(((((Eremothecium cymbalariae DBVPG 7215:0.0482528,Eremothecium gossypii ATCC 10895:0.0869488)100:0.0173328,(Eremothecium sinecaudum ATCC 58844:0.0547745,Eremothecium coryli CBS 5749:0.0443996)55:0.00927931)100:0.0479904,(Kluyveromyces aestuarii NRRL YB-4510:0.0661155,(Kluyveromyces marxianus CBS6556:0.0381194,(Kluyveromyces dobzhanskii NRRL Y-1974:0.0402393,Kluyveromyces lactis NRRL Y-1140:0.0242856)100:0.0197354)100:0.0335599)100:0.051824)100:0.0229944,(Lachancea kluyveri:0.0625351,((Lachancea cidri:0.185105,Lachancea mirantina:0.119783)99:0.0288772,((Lachancea dasiensis:0.1214,(Lachancea waltii:0.00819208,(Lachancea meyersii CBS 8951:0.183661,Lachancea nothofagi:0.158248)92:0.0175256)35:0.000265047)81:0.0265036,(Lachancea lanzarotensis CBS 12615:0.0483696,(Lachancea quebecensis:0.0129892,(Lachancea thermotolerans CBS 6340:0.00142213,Lachancea thermotolerans:0.00168073)100:0.00945148)100:0.0453357)95:0.0251145)61:0.0240587)100:0.0154712)100:0.0115994)100:0.0190621,((((Zygosaccharomyces kombuchaensis NRRL YB-4811:0.046758,(Zygosaccharomyces bisporus NRRL Y-12626:0.0360355,Zygosaccharomyces bailii:0.0398601)100:0.0121151)100:0.0202831,(Zygosaccharomyces sapae:0.0121896,(Zygosaccharomyces rouxii v1:0.00340107,Zygosaccharomyces rouxii:0.00320738)100:0.00810975)100:0.0509075)100:0.0714314,((Torulaspora microellipsoides:0.0475723,(Zygotorulaspora florentina NRRL Y-1560:0.0483917,Zygotorulaspora mrakii NRRL Y-12654:0.055265)100:0.0283279)99:0.00902968,(Torulaspora maleeae CBS 10694:0.052034,(Torulaspora delbrueckii:0.0233883,(Torulaspora franciscae NRRL Y-17532:0.0262398,Torulaspora pretoriensis NRRL Y-17251:0.0244877)100:0.0186046)100:0.018761)100:0.0240214)100:0.0161415)100:0.0295256,(((Tetrapisispora blattae:0.0525052,Yueomyces sinensis NRRL Y-17406:0.099179)100:0.0421829,(Vanderwaltozyma polyspora:0.0729678,(Tetrapisispora iriomotensis NRRL Y-27309:0.0560405,(Tetrapisispora phaffii CBS 4417:0.0338951,(Tetrapisispora fleetii NRRL Y-27350:0.0348304,Tetrapisispora namnaoensis NRRL Y-27982:0.0327815)100:0.0179)100:0.0198241)100:0.048753)100:0.0314575)100:0.0246669,((Naumovozyma castellii:0.0505552,(((Kazachstania africana CBS 2517:0.0646844,(Kazachstania viticola NRRL Y-27206:0.0759366,Kazachstania martiniae NRRL Y-409:0.0521419)100:0.0130001)97:0.0077118,((Kazachstania rosinii NRRL Y-17919:0.0596281,Kazachstania spencerorum NRRL Y-17920:0.0768462)100:0.0126981,(Kazachstania turicensis NRRL Y-48834:0.0431203,Kazachstania kunashirensis NRRL Y-27209:0.0559373)100:0.0293573)100:0.0207873)97:0.0114597,(Kazachstania intestinalis NRRL Y-48847:0.0833165,(Kazachstania bromeliacearum NRRL Y-48836:0.079683,((Kazachstania taianensis NRRL Y-48846:0.078128,Kazachstania naganishii CBS 8797:0.0939904)100:0.0218932,((Kazachstania yakushimaensis NRRL Y-48837:0.0243461,Kazachstania transvaalensis NRRL Y-17245:0.0430026)100:0.0585229,(Kazachstania siamensis NRRL Y-48842:0.0457349,(Kazachstania unispora NRRL Y-1556:0.0380544,(Kazachstania solicola NRRL Y-27207:0.0275766,Kazachstania aerobia NRRL Y-27976:0.0259698)100:0.024771)100:0.0190303)100:0.0346524)100:0.0155365)100:0.010997)100:0.0149155)97:0.0121949)100:0.0163685)100:0.0115806,(((Nakaseomyces bacillisporus CBS 7720:0.0602697,_Candida_ castellii CBS 4332:0.0552284)100:0.0196278,(_Candida_ glabrata CBS 138:0.0400934,(_Candida_ bracarensis CBS 10154:0.0249734,(_Candida_ nivariensis CBS 9983:0.0220311,Nakaseomyces delphensis CBS 2170:0.029392)100:0.00532474)100:0.016744)100:0.0575278)100:0.0195602,(Lachancea fermentati:0.180518,(((Saccharomyces bayanus NBRC1948:0.00599558,(Saccharomyces eubayanus:0.0311309,(Saccharomyces pastorianus CBS 1503:0.0081642,Saccharomyces pastorianus CBS 1513:0.0041158)100:0.00354016)100:0.00386148)100:0.0060333,(Candida norvegica:0.0339226,(Saccharomyces bayanus CBS 7001:0.0182511,(Saccharomyces bayanus 623-6C CBS 7001:0.00237523,Saccharomyces uvarum:0.00363307)100:0.00208439)100:0.00457913)100:0.00367531)100:0.0171416,(Saccharomyces arboricola:0.0257175,(Saccharomyces kudriavzevii:0.0231824,((Saccharomyces jurei:0.00897546,(Saccharomyces mikatae IFO 1815:0.00132382,Saccharomyces mikatae:0.00400149)100:0.00689138)100:0.0136218,(Saccharomyces cerevisiae x Saccharomyces kudriavzevii x Saccharomyces uvarum CBS 2834:0.00682362,(Saccharomyces cerevisiae x Saccharomyces kudriavzevii:0.00517659,((Saccharomyces cerevisiae x Saccharomyces eubayanus Hybrid H1:0.00776694,(Saccharomyces pastorianus VTT A-63015:0.00325668,Saccharomyces pastorianus Weihenstephan 34/70:0.0116326)100:0.00241464)100:0.0019361,((Saccharomyces cerevisiae Vin13:0.00163674,((Saccharomyces cerevisiae x Saccharomyces mikatae:0.00797371,(Saccharomyces cerevisiae FostersO:0.00307742,(Saccharomyces paradoxus:0.0129436,Saccharomyces cerevisiae x Saccharomyces paradoxus DBVPG1373xZ1:0.00341844)100:0.00492533)99:0.00226386)88:0.000728143,(Ogataea polymorpha RB11:0.000245516,((Candida tropicalis CBS 94:0.000399229,Ogataea polymorpha CBS 4732:0.000452355)100:0.000174036,((Zygosaccharomyces rouxii CBS 732:0.000356679,Lachancea thermotolerans CBS 6340:0.000527001)87:0.000158257,(Millerozyma farinosa CBS 7064:0.000250795,(Kluyveromyces marxianus CBS 712:0.000321026,(Saccharomyces cerevisiae S288C:0.000481844,Saccharomyces cerevisiae AWRI796:0.00294417)100:0.000752871)98:0.000129624)100:0.000812457)79:6.41111e-05)78:0.000115355)100:0.00113339)88:0.000426612)88:0.000745475,(Candida gropengiesseri:0.00398597,(Candida batistae:0.00191938,((Wickerhamiella domercqiae:0.0731683,Wickerhamiella versatilis JCM 5958:0.0917899)100:0.0201985,((Candida stellata:0.0447414,(Candida davenportii:0.0883913,Starmerella bacillaris NP2:0.0706162)100:0.0389893)100:0.0266105,((Starmerella bombicola JCM 9596:0.085771,(Candida bombi:0.0676886,Candida apicola NRRL Y-50540:0.0505998)100:0.0206182)100:0.0320175,(Candida geochares:0.0607001,(Candida sorbosivorans:0.0414339,(Wickerhamiella galacta:0.00713286,Candida magnoliae:0.0215597)100:0.016667)100:0.00941328)100:0.0286677)100:0.0198253)100:0.0223772)100:0.106092)100:0.00330585)100:0.00340044)88:0.000881557)94:0.0026942)94:0.00647231)94:0.00702113)100:0.00371471)100:0.00556456)100:0.00752715)100:0.0530619)100:0.0292997)100:0.015258)100:0.0168147)100:0.0146565)100:0.0355872)100:0.027864)100:0.102054)100:0.0402833,(((Pachysolen tannophilus NRRL Y-2460:0.0808212,((Peterozyma xylosa NRRL Y-12939:0.0413235,Peterozyma toletana NRRL YB-4247:0.0363934)100:0.079557,(Nakazawaea peltata JCM 9829:0.0790579,(Nakazawaea holstii NRRL Y-2155:0.076221,Nakazawaea wickerhamii NRRL Y-2563:0.0830923)100:0.0236035)100:0.0313818)100:0.0167062)100:0.0309597,(((Citeromyces siamensis NRRL Y-27975:0.0596415,(Citeromyces hawaiiensis NRRL Y-11581:0.0404304,Citeromyces matritensis NRRL Y-2407:0.0405154)100:0.0300409)100:0.0722959,((Komagataella populi NRRL YB-455:0.00452192,Komagataella pseudopastoris NRRL Y-27603:0.00450592)100:0.0174026,(Komagataella pastoris:0.00889631,(Komagataella phaffii:0.000148318,(Komagataella phaffii GS115:4.69073e-05,Komagataella phaffii:0.000106001)100:7.7985e-05)100:0.00811704)100:0.0144677)100:0.140854)100:0.0285972,((Kuraishia ogatae NRRL Y-48474:0.0914258,(Kuraishia molischiana NRRL Y-27899:0.0581477,Kuraishia capsulata:0.0467181)100:0.0478643)100:0.0195164,(Candida boidinii JCM 9604:0.110969,(((Candida succiphila JCM 9445:0.0886966,Ogataea naganishii NRRL Y-7654:0.0959386)100:0.0167412,(Ogataea methylivora NRRL Y-17250:0.0855903,Ogataea ramenticola NRRL YB-1985:0.0987928)100:0.0178331)100:0.0227408,((((Ogataea pilisensis NRRL Y-27598:0.066275,Ogataea nitratoaversa NRRL Y-48449:0.0642773)100:0.028961,(Candida arabinofermentans NRRL YB-2248:0.0849656,(Ogataea trehalophila NRRL Y-6781:0.0487782,Ogataea methanolica JCM 10240:0.0493589)100:0.0293327)100:0.0140467)100:0.0279201,(Ogataea trehaloabstinens NRRL Y-27595:0.099808,((Ogataea zsoltii NRRL Y-27601:0.0533496,(Ogataea glucozyma NRRL YB-2185:0.0502725,(Ogataea henricii NRRL YB-2194:0.0474431,(Ogataea pini NRRL Y-11528:0.000173811,Ogataea populi-albae NRRL Y-48632:0.000238677)100:0.0473245)100:0.0117949)100:0.010016)100:0.0313845,((Ogataea nonfermentans NRRL YB-2203:0.0463412,Ogataea minuta NRRL Y-411:0.0528823)100:0.0269107,(Ogataea philodendri NRRL Y-7210:0.0685447,(Ogataea kodamae NRRL Y-17234:0.0684285,(Ogataea parapolymorpha:0.019301,(Ogataea angusta:0.00598477,Ogataea polymorpha NCYC 495 leu1.1:0.000116775)100:0.00806111)100:0.0330794)100:0.0111215)100:0.0117704)100:0.0279163)100:0.0145388)100:0.0167219)100:0.0177219,((Ambrosiozyma maleeae NRRL Y-63635:0.0833518,((Ambrosiozyma kashinagacola JCM 15019:0.0693266,(Ambrosiozyma pseudovanderkliftii NRRL Y-63632:0.0577148,Ambrosiozyma vanderkliftii NRRL Y-63633:0.0566447)100:0.0243184)100:0.0165422,(Ambrosiozyma monospora JCM 7599:0.0768011,(Ambrosiozyma oregonensis NRRL Y-6106:0.0577061,(Ambrosiozyma philentoma NRRL Y-7523:0.0407241,Ambrosiozyma ambrosiae NRRL Y-7524:0.058601)95:0.0150731)100:0.0404117)100:0.0150307)100:0.0199196)100:0.0274069,((Candida sp. JCM 15000:0.0941246,(Brettanomyces custersianus NRRL Y-6653:0.086231,(Brettanomyces anomalus:0.0318015,(Brettanomyces bruxellensis:0.000593528,(Brettanomyces bruxellensis CBS 2499:0.00109505,Brettanomyces bruxellensis:0.00264587)100:0.000384652)100:0.0247517)100:0.0615694)100:0.0521429)100:0.0778521,((Kregervanrija fluxuum NRRL YB-4273:0.0374345,Kregervanrija delftensis NRRL Y-7119:0.0405164)100:0.0638635,((Martiniozyma abiesophila NRRL Y-11514:0.109633,((Saturnispora silvae NRRL Y-6725:0.0831621,Saturnispora mendoncae NRRL Y-11515:0.067902)100:0.0265947,(Saturnispora saitoi NRRL Y-6671:0.0588065,(Saturnispora zaruensis NRRL Y-7008:0.0528894,(Saturnispora dispora NRRL Y-1447:0.0370446,(Saturnispora hagleri NRRL Y-27828:0.0255079,Saturnispora serradocipensis NRRL Y-48717:0.0340521)100:0.0169599)100:0.0125902)100:0.0247621)100:0.0299834)100:0.0367605)100:0.0308369,((Pichia terricola NRRL YB-4310:0.074898,Candida sorboxylosa JCM 1536:0.0758895)100:0.0245451,((Candida californica:0.0648764,(Pichia membranifaciens NRRL Y-2026:0.0243445,Pichia membranifaciens KS47-1:0.0209896)100:0.0311224)59:0.0177483,((Pichia norvegensis NRRL Y-7687:0.0887783,Pichia kudriavzevii:0.082125)100:0.0177134,((Pichia nakasei NRRL Y-7686:0.067107,Pichia heedii NRRL Y-10967:0.0588032)100:0.0369725,(Pichia occidentalis NRRL Y-7552:0.0675481,Pichia exigua NRRL Y-10920:0.0755201)59:0.0151337)59:0.0107938)59:0.0109712)100:0.0124365)100:0.0326334)100:0.0231644)100:0.0331026)100:0.0335554)100:0.0176088)100:0.0289504)99:0.0137276)100:0.034821)100:0.0193198)100:0.0237829)100:0.0278153,(Babjeviella inositovora NRRL Y-12698:0.0830192,((Cephaloascus fragrans:0.0569461,Cephaloascus albidus:0.0718853)100:0.0346833,((Candida schatavii NRRL Y-17078:0.091576,(Candida fragi NRRL Y-17910:0.0453009,Kurtzmaniella cleridarum NRRL Y-48386:0.0568199)100:0.0648921)100:0.0253452,((((Candida ascalaphidarum NRRL Y-27908:0.098612,Diutina catenulata:0.148142)95:0.0200365,(Candida athensensis NRRL Y-27644:0.0392514,((Meyerozyma guilliermondii:0.000908622,Meyerozyma guilliermondii ATCC 6260:0.00309795)100:0.0101255,(Meyerozyma caribbica:0.009389,Candida carpophila JCM 9396:0.00717367)100:0.00816186)100:0.0269725)100:0.0762289)92:0.0167428,((Candida tammaniensis NRRL Y-8257:0.0674796,Candida gorgasii NRRL Y-27707:0.0694565)100:0.0285249,(Yamadazyma scolyti NRRL Y-5512:0.0774375,(Candida aaseri SH-14:0.0654444,((Yamadazyma laniorum yHMH7:0.0417828,Yamadazyma tenuis:0.0402424)100:0.0282539,(Yamadazyma nakazawae NRRL Y-7903:0.0408872,Yamadazyma philogaea NRRL Y-7813:0.0504395)100:0.0356588)100:0.0194215)100:0.0124815)100:0.0205036)100:0.0585866)77:0.0121471,(((Priceomyces carsonii NRRL YB-4275:0.0773801,(Priceomyces medius NRRL Y-7122:0.0599315,(Priceomyces castillae NRRL Y-7501:0.0479101,Priceomyces haplophilus JCM 1635:0.0517119)100:0.0177603)100:0.0293383)100:0.0429337,(Millerozyma acaciae JCM 10732:0.0740945,(Debaryomyces maramus NRRL Y-2171:0.0742901,((Debaryomyces hansenii:0.0094309,Debaryomyces tyrocola:0.00741868)100:0.0123071,(Debaryomyces fabryi NRRL Y-17914:0.0115779,(Debaryomyces hansenii J6:0.00478424,(Debaryomyces subglobosus NRRL Y-6666:0.00307223,(Debaryomyces prosopidis NRRL Y-27369:0.0266364,Debaryomyces nepalensis NRRL Y-7108:0.0590941)100:0.0214071)100:0.0162527)100:0.0127128)100:0.00837282)100:0.0302908)100:0.0281444)100:0.0204554)98:0.014532,((((Wickerhamia fluorescens JCM 1821:0.0804346,(Teunomyces gatunensis NRRL Y-48064:0.0543253,(Teunomyces kruisii NRRL Y-17087:0.0250798,Teunomyces cretensis NRRL Y-27777:0.0295176)100:0.0240266)100:0.0384231)100:0.0131621,((Aciculoconidium aculeatum NRRL YB-4298:0.0837536,(Kodamaea laetipori NRRL Y-27713:0.0636316,(Kodamaea ohmeri NRRL Y-1932:0.0490485,Candida restingae NRRL Y-27358:0.0479262)100:0.0351338)100:0.0169767)100:0.0342227,(Suhomyces pyralidae NRRL Y-27085:0.0720593,((Suhomyces canberraensis NRRL YB-2417:0.0513793,Suhomyces emberorum NRRL Y-27606:0.0573297)100:0.013494,(Suhomyces tanzawaensis:0.000172874,Suhomyces tanzawaensis NRRL Y-17324:0.000124577)100:0.0429432)100:0.0187886)100:0.0236942)100:0.0114544)100:0.012213,(((Scheffersomyces lignosus JCM 9837:0.0282656,Scheffersomyces shehatae ATY839:0.0176242)100:0.034077,(Scheffersomyces stipitis:0.000518897,Scheffersomyces stipitis NRRL Y-7124:0.00119922)100:0.0475992)100:0.0326218,(((Spathaspora gorwiae UFMG-CM-Y312:0.0172059,Spathaspora sp.:0.017776)100:0.0470127,(Spathaspora arborariae:0.0407776,(Spathaspora sp.:0.0365321,(Spathaspora passalidarum NRRL Y-27907:0.000681504,(Spathaspora passalidarum:0.00100702,Spathaspora passalidarum:0.000326132)100:0.00040554)100:0.0255792)100:0.0120683)100:0.040913)100:0.0204885,((Candida corydali NRRL Y-27910:0.0859408,(Lodderomyces elongisporus:0.0706966,(Candida metapsilosis:0.0259618,(Candida orthopsilosis:0.0216995,Candida parapsilosis:0.0233949)100:0.00841778)100:0.0372902)100:0.0291739)100:0.0147675,((Candida sojae GF41:0.0310027,Candida tropicalis ATCC 200956 MY1012:0.0110004)100:0.0223129,(Candida dubliniensis CD36:0.0709642,(Naumovozyma dairenensis:0.00144647,(Candida albicans WO-1:0.00123288,Candida albicans:0.00103971)100:0.000641177)100:0.0102161)100:0.0290815)100:0.0324332)100:0.0267713)100:0.0394725)95:0.0128346)95:0.02227,(((Hyphopichia homilentoma JCM 1507:0.0587536,Hyphopichia burtonii NRRL Y-1933:0.0713047)100:0.016959,(Danielozyma ontarioensis NRRL YB-1246:0.0873366,(Candida gotoi NRRL Y-27225:0.0455032,(Candida rhagii NRRL Y-2594:0.0222124,Hyphopichia heimii NRRL Y-7502:0.0224423)100:0.0230844)100:0.0392466)100:0.0145792)100:0.0209346,((_Candida_ auris:0.0455892,(Candida heveicola NRRL Y-48716:0.0410977,Candida pseudohaemulonis B12108:0.0394728)100:0.0226688)100:0.0469312,((Candida oregonensis NRRL Y-5850:0.0865896,((Candida intermedia JCM 1607:0.042487,Candida blattae NRRL Y-27698:0.0530799)100:0.0238467,(Clavispora fructus NRRL Y-17072:0.0576833,Clavispora lusitaniae:0.0491396)100:0.0272481)100:0.0102521)96:0.0107527,(Metschnikowia bicuspidata:0.104942,((Candida wancherniae NRRL Y-48709:0.0784867,(Candida golubevii NRRL Y-48707:0.0554815,(Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993:0.0413189,(Metschnikowia fructicola:0.0157945,Metschnikowia fructicola:0.0148367)100:0.0299732)100:0.0118293)100:0.0209009)100:0.0131789,((Metschnikowia drosophilae UWOPS83-1135.3:0.021045,Candida torresii CBS 5152:0.0230134)100:0.0543554,((Metschnikowia orientalis UWOPS99-745.6:0.0433538,Candida hawaiiana:0.0375214)100:0.0152737,(Metschnikowia sp. M2Y3 EBD-CdV M2Y3:0.0331658,((Metschnikowia kipukae UWOPS 00-669.2:0.0297972,(Metschnikowia hibisci UWOPS 95-797.2:0.0265758,(Metschnikowia aberdeeniae SUB 05-213.1:0.0117725,Metschnikowia shivogae UWOPS 04-310.1:0.0110661)100:0.0119074)100:0.015541)58:0.00570717,((Metschnikowia proteae:0.0057267,Metschnikowia drakensbergensis:0.0055943)100:0.0241508,(((Metschnikowia arizonensis UWOPS 99-103.4:0.0370555,Metschnikowia colocasiae UWOPS 03-202.1:0.0171738)93:0.00452229,(Metschnikowia sp. 03-147.1 UWOPS 03-147.1:0.0208946,(Metschnikowia similis UWOPS 03-133.4:0.0111303,(Metschnikowia dekortorum:0.00697665,Metschnikowia bowlesiae:0.00921332)100:0.00571605)100:0.023746)93:0.00417948)100:0.00628612,((Metschnikowia hawaiiensis UWOPS 87-2203.2:0.0301812,Metschnikowia sp. 04-218.3 UWOPS 04-218.3:0.0150044)100:0.0108385,((Metschnikowia lochheadii UWOPS 99-661.1:0.00971309,(Metschnikowia matae var. matae UFMG-CM-Y391A:0.00687815,Metschnikowia matae var. maris UFMG-CM-Y397T:0.00685245)100:0.00661365)100:0.00543424,((Metschnikowia sp. 04-226.1 UWOPS 04-226.1:0.00877917,(Metschnikowia continentalis UWOPS 95-402.1:0.00829922,(Metschnikowia santaceciliae UWOPS 01-517a1:0.00694966,Metschnikowia cerradonensis:0.00643801)100:0.0022256)100:0.00393078)100:0.00346672,((Metschnikowia cubensis MUCL 45751:0.0116299,Metschnikowia sp. 01-655c1 UWOPS 01-655c1:0.010726)100:0.00475537,(Candida ipomoeae UWOPS 10-104.1:0.0120555,(Metschnikowia borealis SUB 99-207.1:0.00434673,Metschnikowia sp. 13-106.1 UWOPS 13-106.1:0.0046889)100:0.0079509)100:0.00239546)100:0.00300571)100:0.00344102)100:0.00898957)100:0.0120361)100:0.00782286)100:0.00621084)58:0.0061066)100:0.0152811)100:0.0320067)56:0.00960016)100:0.0151264)100:0.014359)99:0.0138301)100:0.0445971)100:0.014915)94:0.00905625)92:0.0102603)100:0.0178837)100:0.0562855)100:0.0243772)100:0.0198609)100:0.0259199)57:0.0176658)100:0.0501942)100:0.045588)99:0.0241612)100:0.0456527)100:0.0313927)100:0.0580377)100:0.0449143)1:0.126204);\",\n            \"LRF1\" : \"((((((((((((((((((TP53_AmelENSAMEP00000017825:0.0263[&&NHX:D=N:T=9646],TP53_MpfuENSMPUP00000008945:0.066538[&&NHX:D=N:T=9669])speciation:0.032561[&&NHX:D=N:B=99:T=379584:DD=],TP53_CfamENSCAFP00000024579:0.086484[&&NHX:D=N:T=9615])speciation:0.034068[&&NHX:D=N:B=81:T=379584:DD=],TP53_FcatENSFCAP00000008925:0.06619[&&NHX:D=N:T=9685])speciation:0.025911[&&NHX:D=N:B=31:T=33554:DD=],TP53_EcabENSECAP00000006210:0.04971[&&NHX:D=N:T=9796])speciation:0.01224[&&NHX:D=N:T=314145:B=17:DD=],(((TP53_BtauENSBTAP00000001420:0.043108[&&NHX:D=N:T=9913],TP53_OariENSOARP00000016707:0.049064[&&NHX:D=N:T=9940])speciation:0.055294[&&NHX:D=N:B=98:T=9895:DD=],TP53_TtruENSTTRP00000009721:0.022529[&&NHX:D=N:T=9739])speciation:0.022515[&&NHX:D=N:T=91561:B=39:DD=],TP53_SscrENSSSCP00000019016:0.065797[&&NHX:D=N:T=9823])speciation:0.020972[&&NHX:D=N:T=91561:B=35:DD=])speciation:0.006996[&&NHX:D=N:B=9:T=314145:DD=],TP53_SaraENSSARP00000005616:0.149927[&&NHX:D=N:T=42254])speciation:0.013221[&&NHX:D=N:T=314145:B=7:DD=],TP53_PvamENSPVAP00000015400:0.117578[&&NHX:D=N:T=132908])speciation:0.0[&&NHX:D=N:B=1:T=314145:DD=],((ENSMLUG00000006411_MlucENSMLUP00000005861:0.003702[&&NHX:D=N:T=59463],ENSMLUG00000025140_MlucENSMLUP00000016733:0.12569[&&NHX:D=N:T=59463])duplication:0.131525[&&NHX:D=Y:T=59463:B=100],TP53_EeurENSEEUP00000013295:0.183463[&&NHX:D=N:T=9365])speciation:0.042602[&&NHX:D=N:T=314145:B=33:DD=])duplication:0.018327[&&NHX:DD=Y:T=314145:B=0:D=],(((((Trp53_MmusENSMUSP00000104298:0.002681[&&NHX:D=N:T=10090],Trp53_MsspMGP_SPRETEiJ_P0028933:0.017851[&&NHX:D=N:T=10096])speciation:0.064969[&&NHX:D=N:B=100:T=862507:DD=],Tp53_RnorENSRNOP00000074031:0.079068[&&NHX:D=N:T=10116])speciation:0.12872[&&NHX:D=N:T=39107:B=100:DD=],LOC100910954_RnorENSRNOP00000064177:0.056502[&&NHX:D=N:T=10116])duplication:0.0[&&NHX:D=Y:B=5:T=39107],TP53_OpriENSOPRP00000005906:0.185911[&&NHX:D=N:T=9978])speciation:0.0[&&NHX:D=N:T=314147:B=0:DD=],((((TP53_MmurENSMICP00000039812:0.054544[&&NHX:D=N:T=30608],TP53_OgarENSOGAP00000015106:0.095719[&&NHX:D=N:T=30611])duplication:0.012762[&&NHX:D=N:B=52:T=376911:DD=],((((((TP53_HsapENSP00000269305:0.0[&&NHX:D=N:T=9606],TP53_GgorENSGGOP00000009561:0.002907[&&NHX:D=N:T=9595])speciation:0.001345[&&NHX:D=N:B=61:T=207598:DD=],TP53_PtroENSPTRP00000014836:0.000592[&&NHX:D=N:T=9598])speciation:0.00877[&&NHX:D=N:B=61:T=207598:DD=],TP53_PabeENSPPYP00000008923:0.009552[&&NHX:D=N:T=9601])speciation:4.8e-05[&&NHX:D=N:T=9604:B=100:DD=],TP53_NleuENSNLEP00000011861:0.032229[&&NHX:D=N:T=61853])speciation:0.004444[&&NHX:D=N:T=314295:B=97:DD=],((TP53_PanuENSPANP00000019643:0.007102[&&NHX:D=N:T=9555],TP53_CsabENSCSAP00000007551:0.010543[&&NHX:D=N:T=60711])speciation:0.000953[&&NHX:D=N:B=100:T=9528:DD=],TP53_MmulENSMMUP00000035274:0.043449[&&NHX:D=N:T=9544])speciation:0.019535[&&NHX:D=N:T=9528:B=55:DD=])speciation:0.013822[&&NHX:D=N:T=9526:B=52:DD=],TP53_CjacENSCJAP00000027663:0.047099[&&NHX:D=N:T=9483])speciation:0.027286[&&NHX:D=N:B=57:T=314293:DD=])speciation:0.013265[&&NHX:D=N:T=9443:B=4:DD=],TP53_TbelENSTBEP00000010189:0.222843[&&NHX:D=N:T=37347])speciation:0.008121[&&NHX:D=N:B=0:T=314146:DD=],((TP53_ItriENSSTOP00000019678:0.08339[&&NHX:D=N:T=43179],Tp53_CporENSCPOP00000012841:0.120892[&&NHX:D=N:T=10141])speciation:0.018406[&&NHX:D=N:T=9989:B=42:DD=],(ENSOCUG00000001138_OcunENSOCUP00000000989:0.013142[&&NHX:D=N:T=9986],ENSOCUG00000022109_OcunENSOCUP00000025959:0.090881[&&NHX:D=N:T=9986])duplication:0.069194[&&NHX:D=Y:T=9986:B=97])speciation:0.015339[&&NHX:D=N:T=314147:B=15:DD=])speciation:0.019539[&&NHX:D=N:B=0:T=314146:DD=])duplication:0.026935[&&NHX:DD=Y:T=314146:B=0:D=])speciation:0.017095[&&NHX:D=N:T=1437010:B=0:DD=],(((((((ENSLAFG00000028692_LafrENSLAFP00000023554:0.00886[&&NHX:D=N:T=9785],ENSLAFG00000030880_LafrENSLAFP00000027441:0.052436[&&NHX:D=N:T=9785])duplication:0.006909[&&NHX:D=Y:B=0:T=9785],ENSLAFG00000030555_LafrENSLAFP00000027808:0.044446[&&NHX:D=N:T=9785])duplication:0.003043[&&NHX:D=Y:T=9785:B=0],(ENSLAFG00000028299_LafrENSLAFP00000024998:0.011792[&&NHX:D=N:T=9785],ENSLAFG00000032042_LafrENSLAFP00000023389:0.017693[&&NHX:D=N:T=9785])duplication:0.015904[&&NHX:D=Y:T=9785:B=74])duplication:0.0[&&NHX:D=Y:B=0:T=9785],(((ENSLAFG00000027365_LafrENSLAFP00000025852:0.011873[&&NHX:D=N:T=9785],ENSLAFG00000026238_LafrENSLAFP00000027253:0.026457[&&NHX:D=N:T=9785])duplication:0.019571[&&NHX:D=Y:T=9785:B=81],ENSLAFG00000027669_LafrENSLAFP00000028793:0.027495[&&NHX:D=N:T=9785])duplication:0.016599[&&NHX:D=Y:T=9785:B=70],ENSLAFG00000027820_LafrENSLAFP00000028173:0.058133[&&NHX:D=N:T=9785])duplication:0.031788[&&NHX:D=Y:T=9785:B=87])duplication:0.038135[&&NHX:D=Y:T=9785:B=10],(ENSLAFG00000027348_LafrENSLAFP00000027515:0.028441[&&NHX:D=N:T=9785],ENSLAFG00000027474_LafrENSLAFP00000018379:0.03464[&&NHX:D=N:T=9785])duplication:0.131904[&&NHX:D=Y:B=100:T=9785],ENSLAFG00000007483_LafrENSLAFP00000006292:0.058399[&&NHX:D=N:T=9785])duplication:0.0075[&&NHX:D=Y:T=9785:B=23],TP53_PcapENSPCAP00000011892:0.114307[&&NHX:D=N:T=9813])speciation:0.010282[&&NHX:D=N:T=311790:B=18:DD=],(ENSETEG00000008987_EtelENSETEP00000007296:0.0[&&NHX:D=N:T=9371],ENSETEG00000009984_EtelENSETEP00000008111:0.105253[&&NHX:D=N:T=9371])duplication:0.154739[&&NHX:D=Y:B=100:T=9371])speciation:0.044399[&&NHX:D=N:T=311790:B=35:DD=])speciation:0.041158[&&NHX:D=N:B=0:T=9347:DD=],TP53_DnovENSDNOP00000004075:0.078395[&&NHX:D=N:T=9361])speciation:0.080059[&&NHX:D=N:B=0:T=9347:DD=],((TP53_SharENSSHAP00000018268:0.0496[&&NHX:D=N:T=9305],ENSMODG00000007271_MdomENSMODP00000009014:0.172546[&&NHX:D=N:T=13616])speciation:0.024952[&&NHX:D=N:T=9263:B=83:DD=],ENSMEUG00000013135_MeugENSMEUP00000011978:0.069167[&&NHX:D=N:T=9315])speciation:0.225429[&&NHX:D=N:B=83:T=9263:DD=])speciation:0.228895[&&NHX:D=N:B=81:T=32525:DD=],tp53_XtroENSXETP00000053759:0.483686[&&NHX:D=N:T=8364])speciation:0.095084[&&NHX:D=N:B=55:T=32523:DD=],(TP53_PsinENSPSIP00000014905:0.228951[&&NHX:D=N:T=13735],ENSOANG00000011981_OanaENSOANP00000018980:0.553865[&&NHX:D=N:T=9258])speciation:0.126185[&&NHX:D=N:B=48:T=32524:DD=])duplication:0.03737[&&NHX:DD=Y:B=17:T=32523:D=],TP53_LchaENSLACP00000015915:0.317935[&&NHX:D=N:T=7897])speciation:0.062274[&&NHX:D=N:B=13:T=8287:DD=],(((tp53_DrerENSDARP00000051548:0.365455[&&NHX:D=N:T=7955],tp53_AmexENSAMXP00000021366:0.579505[&&NHX:D=N:T=7994])speciation:0.105036[&&NHX:D=N:B=46:T=186626:DD=],((((((tp53_TrubENSTRUP00000030645:0.158124[&&NHX:D=N:T=31033],tp53_TnigENSTNIP00000013035:0.25403[&&NHX:D=N:T=99883])speciation:0.1396[&&NHX:D=N:T=31031:B=100:DD=],tp53_OlatENSORLP00000008029:0.359414[&&NHX:D=N:T=8090])speciation:0.040022[&&NHX:D=N:T=1489872:B=1:DD=],(tp53_GacuENSGACP00000025614:0.249641[&&NHX:D=N:T=69293],tp53_OnilENSONIP00000023874:0.251831[&&NHX:D=N:T=8128])speciation:0.085834[&&NHX:D=N:T=1489872:B=100:DD=])duplication:0.070104[&&NHX:DD=Y:T=1489872:B=0:D=],(tp53_PforENSPFOP00000007556:0.070709[&&NHX:D=N:T=48698],tp53_XmacENSXMAP00000015753:0.165631[&&NHX:D=N:T=8083])speciation:0.290725[&&NHX:D=N:B=100:T=586240:DD=])duplication:0.058888[&&NHX:DD=Y:B=2:T=1489872:D=],ENSGMOG00000007755_GmorENSGMOP00000008291:0.272843[&&NHX:D=N:T=8049])speciation:0.143728[&&NHX:D=N:T=123368:B=3:DD=],TP531ofmany_AmexENSAMXP00000007265:0.383807[&&NHX:D=N:T=7994])speciation:0.129809[&&NHX:D=N:T=186625:B=41:DD=])duplication:0.079851[&&NHX:D=Y:B=6:T=186625],tp53_LocuENSLOCP00000017063:0.263043[&&NHX:D=N:T=7918])speciation:0.079504[&&NHX:D=N:T=41665:B=5:DD=])speciation:0.205725[&&NHX:D=N:B=10:T=117571:DD=],ENSPMAG00000009535_PmarENSPMAP00000010479:0.363682[&&NHX:D=N:T=7757])speciation:0.005138[&&NHX:D=N:B=0:T=7742:DD=],((((((((((((TP63_MgalENSMGAP00000001036:0.00675[&&NHX:D=N:T=9103],TP63_GgalENSGALP00000032705:0.02786[&&NHX:D=N:T=9031])speciation:0.018196[&&NHX:D=N:B=100:T=9005:DD=],TP63_AplaENSAPLP00000012746:0.025285[&&NHX:D=N:T=8839])speciation:0.020559[&&NHX:D=N:B=100:T=1549675:DD=],(TP63_TgutENSTGUP00000009686:0.018245[&&NHX:D=N:T=59729],TP63_FalbENSFALP00000007718:0.02902[&&NHX:D=N:T=59894])speciation:0.022707[&&NHX:D=N:B=100:T=9126:DD=])speciation:0.046097[&&NHX:D=N:T=8825:B=100:DD=],TP63_PsinENSPSIP00000018044:0.123057[&&NHX:D=N:T=13735])speciation:0.005555[&&NHX:D=N:T=1329799:B=37:DD=],TP63_AcarENSACAP00000000376:0.736631[&&NHX:D=N:T=28377])speciation:0.010123[&&NHX:D=N:B=0:T=32561:DD=],((((((((((Trp63_MmusENSMUSP00000110965:0.000847[&&NHX:D=N:T=10090],Trp63_MsspMGP_SPRETEiJ_P0042982:0.004734[&&NHX:D=N:T=10096])speciation:0.021561[&&NHX:D=N:B=100:T=862507:DD=],Tp63_RnorENSRNOP00000033463:0.030383[&&NHX:D=N:T=10116])speciation:0.048568[&&NHX:D=N:T=39107:B=100:DD=],Trp63_DordENSDORP00000001930:0.044582[&&NHX:D=N:T=10020],TP63_ItriENSSTOP00000012357:0.057295[&&NHX:D=N:T=43179])speciation:0.000474[&&NHX:D=N:T=33553:B=0:DD=],TP63_CporENSCPOP00000013308:0.058396[&&NHX:D=N:T=10141])speciation:0.003336[&&NHX:D=N:B=0:T=9989:DD=],TP63_OpriENSOPRP00000002632:0.076764[&&NHX:D=N:T=9978])speciation:0.001386[&&NHX:D=N:B=0:T=314147:DD=],(TP63_OcunENSOCUP00000014157:0.04305[&&NHX:D=N:T=9986],TP63_OgarENSOGAP00000003415:0.053686[&&NHX:D=N:T=30611])speciation:0.018263[&&NHX:D=N:B=56:T=314146:DD=])duplication:0.0[&&NHX:DD=Y:T=314146:B=0:D=],TP63_TbelENSTBEP00000003655:0.050557[&&NHX:D=N:T=37347])speciation:0.000127[&&NHX:D=N:B=0:T=314146:DD=],(((((((TP63_PvamENSPVAP00000008543:0.02784[&&NHX:D=N:T=132908],TP63_MlucENSMLUP00000014213:0.029592[&&NHX:D=N:T=59463])speciation:0.007063[&&NHX:D=N:B=37:T=9397:DD=],(((TP63_AmelENSAMEP00000000831:0.015923[&&NHX:D=N:T=9646],TP63_CfamENSCAFP00000020585:0.020935[&&NHX:D=N:T=9615])speciation:0.003042[&&NHX:D=N:T=379584:B=80:DD=],TP63_MpfuENSMPUP00000003407:0.032827[&&NHX:D=N:T=9669])speciation:0.009414[&&NHX:D=N:B=64:T=379584:DD=],TP63_FcatENSFCAP00000000731:0.02322[&&NHX:D=N:T=9685])speciation:0.017067[&&NHX:D=N:T=33554:B=74:DD=])speciation:0.001436[&&NHX:D=N:T=314145:B=0:DD=],((((TP63_BtauENSBTAP00000020544:0.005072[&&NHX:D=N:T=9913],TP63_OariENSOARP00000021997:0.009983[&&NHX:D=N:T=9940])speciation:0.025469[&&NHX:D=N:T=9895:B=100:DD=],TP63_TtruENSTTRP00000011034:0.022489[&&NHX:D=N:T=9739])speciation:0.005877[&&NHX:D=N:B=58:T=91561:DD=],TP63_SscrENSSSCP00000025960:0.02089[&&NHX:D=N:T=9823])speciation:0.005665[&&NHX:D=N:B=29:T=91561:DD=],TP63_VpacENSVPAP00000011479:0.032735[&&NHX:D=N:T=30538])speciation:0.007589[&&NHX:D=N:B=13:T=91561:DD=])speciation:0.001552[&&NHX:D=N:B=0:T=314145:DD=],(TP63_EcabENSECAP00000016315:0.020605[&&NHX:D=N:T=9796],TP63_EeurENSEEUP00000012623:0.068478[&&NHX:D=N:T=9365])speciation:0.015388[&&NHX:D=N:B=15:T=314145:DD=])speciation:0.00388[&&NHX:D=N:T=314145:B=0:DD=],((((((((TP63_HsapENSP00000264731:0.001872[&&NHX:D=N:T=9606],TP63_GgorENSGGOP00000020551:0.002754[&&NHX:D=N:T=9595])speciation:0.000918[&&NHX:D=N:T=207598:B=46:DD=],TP63_PtroENSPTRP00000027067:0.001869[&&NHX:D=N:T=9598])speciation:0.002874[&&NHX:D=N:T=207598:B=46:DD=],TP63_PabeENSPPYP00000016106:0.004542[&&NHX:D=N:T=9601])speciation:0.000913[&&NHX:D=N:T=9604:B=70:DD=],TP63_NleuENSNLEP00000008197:0.004734[&&NHX:D=N:T=61853])speciation:0.000949[&&NHX:D=N:T=314295:B=66:DD=],((TP63_MmulENSMMUP00000038274:0.003714[&&NHX:D=N:T=9544],TP63_CsabENSCSAP00000005295:0.026509[&&NHX:D=N:T=60711])speciation:0.0[&&NHX:D=N:B=31:T=9528:DD=],TP63_PanuENSPANP00000003169:0.001823[&&NHX:D=N:T=9555])speciation:0.010162[&&NHX:D=N:B=31:T=9528:DD=])speciation:0.010185[&&NHX:D=N:T=9526:B=95:DD=],TP63_CjacENSCJAP00000026376:0.015601[&&NHX:D=N:T=9483])speciation:0.013295[&&NHX:D=N:T=314293:B=100:DD=],TP63_MmurENSMICP00000022696:0.021271[&&NHX:D=N:T=30608])speciation:0.0[&&NHX:D=N:B=42:T=9443:DD=],(TP63_TsyrENSTSYP00000003403:0.025783[&&NHX:D=N:T=1868482],TP63_SaraENSSARP00000011553:0.056367[&&NHX:D=N:T=42254])speciation:0.010618[&&NHX:D=N:B=14:T=1437010:DD=])duplication:0.006497[&&NHX:DD=Y:B=1:T=1437010:D=])duplication:0.0[&&NHX:DD=Y:B=0:T=1437010:D=],(TP63_DnovENSDNOP00000012853:0.025753[&&NHX:D=N:T=9361],TP63_ChofENSCHOP00000009300:0.040693[&&NHX:D=N:T=9358])speciation:0.020456[&&NHX:D=N:B=76:T=9348:DD=])speciation:0.001941[&&NHX:D=N:T=9347:B=0:DD=],((TP63_LafrENSLAFP00000020806:0.016207[&&NHX:D=N:T=9785],TP63_PcapENSPCAP00000004708:0.030306[&&NHX:D=N:T=9813])speciation:0.00755[&&NHX:D=N:T=311790:B=91:DD=],TP63_EtelENSETEP00000001864:0.071017[&&NHX:D=N:T=9371])speciation:0.015236[&&NHX:D=N:T=311790:B=8:DD=])speciation:0.007477[&&NHX:D=N:B=0:T=9347:DD=])duplication:0.052158[&&NHX:DD=Y:B=0:T=9347:D=],((TP63_MdomENSMODP00000018831:0.034607[&&NHX:D=N:T=13616],TP63_MeugENSMEUP00000014131:0.045944[&&NHX:D=N:T=9315])speciation:0.011561[&&NHX:D=N:T=9263:B=100:DD=],TP63_SharENSSHAP00000008666:0.303146[&&NHX:D=N:T=9305])speciation:0.054652[&&NHX:D=N:B=12:T=9263:DD=])speciation:0.017647[&&NHX:D=N:B=2:T=32525:DD=],TP63_OanaENSOANP00000021753:0.079276[&&NHX:D=N:T=9258])speciation:0.043447[&&NHX:D=N:T=40674:B=2:DD=])speciation:0.034349[&&NHX:D=N:T=32524:B=0:DD=],tp63_XtroENSXETP00000055541:0.267401[&&NHX:D=N:T=8364])speciation:0.032348[&&NHX:D=N:B=0:T=32523:DD=],(ENSACAG00000002961_AcarENSACAP00000002870:0.0[&&NHX:D=N:T=28377],ENSACAG00000022533_AcarENSACAP00000021196:1.16541[&&NHX:D=N:T=28377])duplication:0.116614[&&NHX:D=Y:T=28377:B=0])duplication:0.005373[&&NHX:D=Y:T=32523:B=0],TP63_LchaENSLACP00000022643:0.17787[&&NHX:D=N:T=7897])speciation:0.031924[&&NHX:D=N:T=8287:B=0:DD=],(((((((tp63_PforENSPFOP00000001124:0.014737[&&NHX:D=N:T=48698],tp63_XmacENSXMAP00000016461:0.044393[&&NHX:D=N:T=8083])speciation:0.052269[&&NHX:D=N:B=99:T=586240:DD=],tp63_OlatENSORLP00000019616:0.105223[&&NHX:D=N:T=8090])speciation:0.020917[&&NHX:D=N:B=24:T=1489913:DD=],tp63_OnilENSONIP00000024326:0.065197[&&NHX:D=N:T=8128])speciation:0.01928[&&NHX:D=N:T=1489908:B=16:DD=],(tp63_TnigENSTNIP00000016776:0.042973[&&NHX:D=N:T=99883],tp63_TrubENSTRUP00000008025:0.048688[&&NHX:D=N:T=31033])speciation:0.043668[&&NHX:D=N:B=100:T=31031:DD=])speciation:0.020832[&&NHX:D=N:B=77:T=1489872:DD=],(ENSGACG00000013629_GacuENSGACP00000018012:0.069577[&&NHX:D=N:T=69293],ENSGMOG00000000413_GmorENSGMOP00000000401:0.110102[&&NHX:D=N:T=8049])speciation:0.067443[&&NHX:D=N:B=97:T=123368:DD=])duplication:0.040724[&&NHX:DD=Y:B=65:T=123368:D=],(tp63_AmexENSAMXP00000004961:0.092792[&&NHX:D=N:T=7994],tp63_DrerENSDARP00000108362:0.121291[&&NHX:D=N:T=7955])speciation:0.046115[&&NHX:D=N:T=186626:B=86:DD=])speciation:0.034365[&&NHX:D=N:T=186625:B=37:DD=],tp63_LocuENSLOCP00000006202:0.102939[&&NHX:D=N:T=7918])speciation:0.049371[&&NHX:D=N:B=52:T=41665:DD=])speciation:0.110844[&&NHX:D=N:B=0:T=117571:DD=],(((((((((((TP73_LafrENSLAFP00000005892:0.029578[&&NHX:D=N:T=9785],TP73_PcapENSPCAP00000000662:0.051492[&&NHX:D=N:T=9813])speciation:0.003183[&&NHX:D=N:T=311790:B=90:DD=],TP73_EtelENSETEP00000007165:0.095673[&&NHX:D=N:T=9371])speciation:0.033805[&&NHX:D=N:T=311790:B=0:DD=],TP73_DnovENSDNOP00000028722:0.457081[&&NHX:D=N:T=9361])speciation:0.006287[&&NHX:D=N:B=0:T=9347:DD=],((((((((TP73_BtauENSBTAP00000007643:0.009498[&&NHX:D=N:T=9913],TP73_OariENSOARP00000017005:0.019572[&&NHX:D=N:T=9940])speciation:0.012531[&&NHX:D=N:T=9895:B=100:DD=],ENSSSCG00000025685_SscrENSSSCP00000022771:0.057187[&&NHX:D=N:T=9823])speciation:0.018712[&&NHX:D=N:T=91561:B=1:DD=],TP73_TtruENSTTRP00000003223:0.039795[&&NHX:D=N:T=9739])speciation:0.015091[&&NHX:D=N:T=91561:B=0:DD=],(((TP73_AmelENSAMEP00000009745:0.040276[&&NHX:D=N:T=9646],TP73_MpfuENSMPUP00000007349:0.069423[&&NHX:D=N:T=9669])speciation:0.011068[&&NHX:D=N:B=5:T=379584:DD=],TP73_CfamENSCAFP00000028819:0.025289[&&NHX:D=N:T=9615])speciation:0.003214[&&NHX:D=N:B=4:T=379584:DD=],TP73_FcatENSFCAP00000010792:0.059719[&&NHX:D=N:T=9685])speciation:0.021832[&&NHX:D=N:B=20:T=33554:DD=])speciation:0.009094[&&NHX:D=N:T=314145:B=0:DD=],TP73_PvamENSPVAP00000008433:0.078992[&&NHX:D=N:T=132908])speciation:0.005352[&&NHX:D=N:T=314145:B=0:DD=],TP73_EeurENSEEUP00000011975:0.098606[&&NHX:D=N:T=9365])speciation:0.0[&&NHX:D=N:B=0:T=314145:DD=],TP73_EcabENSECAP00000001313:0.038035[&&NHX:D=N:T=9796])speciation:0.007356[&&NHX:D=N:T=314145:B=0:DD=],((((((Trp73_MsspMGP_SPRETEiJ_P0068738:0.0082[&&NHX:D=N:T=10096],Trp73_MmusENSMUSP00000101269:0.011834[&&NHX:D=N:T=10090])speciation:0.027464[&&NHX:D=N:B=100:T=862507:DD=],Tp73_RnorENSRNOP00000052265:0.034464[&&NHX:D=N:T=10116])speciation:0.085459[&&NHX:D=N:T=39107:B=100:DD=],TP73_ItriENSSTOP00000022492:0.061184[&&NHX:D=N:T=43179])speciation:0.008334[&&NHX:D=N:B=2:T=33553:DD=],Trp73_DordENSDORP00000013966:0.076743[&&NHX:D=N:T=10020])speciation:0.0[&&NHX:D=N:T=33553:B=0:DD=],TP73_CporENSCPOP00000009800:0.075508[&&NHX:D=N:T=10141])speciation:0.004958[&&NHX:D=N:T=9989:B=0:DD=],((TP73_MmurENSMICP00000031305:0.033995[&&NHX:D=N:T=30608],TP73_OgarENSOGAP00000005402:0.043894[&&NHX:D=N:T=30611])speciation:0.017054[&&NHX:D=N:T=376911:B=93:DD=],((((((TP73_GgorENSGGOP00000015180:0.00182[&&NHX:D=N:T=9595],TP73_HsapENSP00000367545:0.005775[&&NHX:D=N:T=9606])speciation:0.0[&&NHX:D=N:T=207598:B=92:DD=],TP73_PtroENSPTRP00000000118:0.05274[&&NHX:D=N:T=9598])speciation:0.005412[&&NHX:D=N:B=81:T=207598:DD=],TP73_PabeENSPPYP00000002277:0.013149[&&NHX:D=N:T=9601])speciation:0.000495[&&NHX:D=N:B=30:T=9604:DD=],TP73_NleuENSNLEP00000009887:0.326917[&&NHX:D=N:T=61853])speciation:0.010918[&&NHX:D=N:T=314295:B=0:DD=],((TP73_PanuENSPANP00000007545:0.004788[&&NHX:D=N:T=9555],TP73_CsabENSCSAP00000017283:0.012519[&&NHX:D=N:T=60711])speciation:0.000519[&&NHX:D=N:T=9528:B=86:DD=],TP73_MmulENSMMUP00000040655:0.025402[&&NHX:D=N:T=9544])duplication:0.013713[&&NHX:D=N:B=75:T=9528:DD=])speciation:0.010332[&&NHX:D=N:T=9526:B=0:DD=],TP73_CjacENSCJAP00000005070:0.291972[&&NHX:D=N:T=9483])speciation:0.022859[&&NHX:D=N:B=0:T=314293:DD=])speciation:0.014731[&&NHX:D=N:B=0:T=9443:DD=])speciation:0.020217[&&NHX:D=N:T=314146:B=0:DD=])speciation:0.01086[&&NHX:D=N:T=1437010:B=0:DD=])speciation:0.048685[&&NHX:D=N:T=9347:B=0:DD=],ENSSSCG00000003361_SscrENSSSCP00000003644:0.097446[&&NHX:D=N:T=9823])duplication:0.016508[&&NHX:D=Y:T=9347:B=0],((TP73_MeugENSMEUP00000000705:0.023362[&&NHX:D=N:T=9315],TP73_MdomENSMODP00000008216:0.259151[&&NHX:D=N:T=13616])speciation:0.035881[&&NHX:D=N:B=57:T=9263:DD=],TP73_SharENSSHAP00000006513:0.042193[&&NHX:D=N:T=9305])speciation:0.069704[&&NHX:D=N:T=9263:B=36:DD=])speciation:0.023293[&&NHX:D=N:T=32525:B=2:DD=],TP73_OanaENSOANP00000019815:0.30572[&&NHX:D=N:T=9258])speciation:0.017992[&&NHX:D=N:B=0:T=40674:DD=],(((((TP73_GgalENSGALP00000001485:0.002093[&&NHX:D=N:T=9031],TP73_MgalENSMGAP00000001059:0.036491[&&NHX:D=N:T=9103])speciation:0.047733[&&NHX:D=N:T=9005:B=100:DD=],TP73_AplaENSAPLP00000003415:0.02254[&&NHX:D=N:T=8839])speciation:0.021618[&&NHX:D=N:T=1549675:B=97:DD=],(TP73_TgutENSTGUP00000002829:0.010561[&&NHX:D=N:T=59729],TP73_FalbENSFALP00000010031:0.030208[&&NHX:D=N:T=59894])speciation:0.023763[&&NHX:D=N:T=9126:B=100:DD=])speciation:0.016346[&&NHX:D=N:B=97:T=8825:DD=],TP73_PsinENSPSIP00000004448:0.109544[&&NHX:D=N:T=13735])speciation:0.026517[&&NHX:D=N:T=1329799:B=84:DD=],TP73_AcarENSACAP00000001746:0.128451[&&NHX:D=N:T=28377])speciation:0.019965[&&NHX:D=N:B=67:T=32561:DD=])speciation:0.036745[&&NHX:D=N:T=32524:B=15:DD=],tp73_XtroENSXETP00000010981:0.182635[&&NHX:D=N:T=8364])speciation:0.011019[&&NHX:D=N:B=1:T=32523:DD=],TP73_LchaENSLACP00000021702:0.142378[&&NHX:D=N:T=7897])speciation:0.024057[&&NHX:D=N:B=0:T=8287:DD=],((((((tp73_TnigENSTNIP00000014938:0.027328[&&NHX:D=N:T=99883],tp73_TrubENSTRUP00000038165:0.032469[&&NHX:D=N:T=31033])speciation:0.059199[&&NHX:D=N:T=31031:B=100:DD=],tp73_GacuENSGACP00000008676:0.048591[&&NHX:D=N:T=69293])speciation:0.007086[&&NHX:D=N:T=1489922:B=29:DD=],(((tp73_PforENSPFOP00000010896:0.013197[&&NHX:D=N:T=48698],tp73_XmacENSXMAP00000017403:0.030558[&&NHX:D=N:T=8083])speciation:0.063838[&&NHX:D=N:B=100:T=586240:DD=],tp73_OlatENSORLP00000005521:0.062083[&&NHX:D=N:T=8090])speciation:0.017304[&&NHX:D=N:B=58:T=1489913:DD=],tp73_OnilENSONIP00000002627:0.053778[&&NHX:D=N:T=8128])speciation:0.014746[&&NHX:D=N:T=1489908:B=29:DD=])speciation:0.072637[&&NHX:D=N:B=14:T=1489872:DD=],tp73_GmorENSGMOP00000016675:0.181445[&&NHX:D=N:T=8049])speciation:0.038065[&&NHX:D=N:T=123368:B=98:DD=],(tp73_AmexENSAMXP00000014358:0.086906[&&NHX:D=N:T=7994],tp73_DrerENSDARP00000109674:0.134572[&&NHX:D=N:T=7955])speciation:0.064476[&&NHX:D=N:T=186626:B=100:DD=])speciation:0.04364[&&NHX:D=N:T=186625:B=43:DD=],tp73_LocuENSLOCP00000006343:0.115822[&&NHX:D=N:T=7918])speciation:0.046704[&&NHX:D=N:T=41665:B=14:DD=])speciation:0.167736[&&NHX:D=N:T=117571:B=27:DD=])duplication:0.067299[&&NHX:D=Y:B=0:T=117571],tp63_PmarENSPMAP00000007639:0.797694[&&NHX:D=N:T=7757])speciation:0.076045[&&NHX:D=N:T=7742:B=0:DD=],(('p53/p73-b CintENSCINP00000004447':0.450754[&&NHX:D=N:T=7719],ENSCSAVG00000009788_CsavENSCSAVP00000016659:0.47517[&&NHX:D=N:T=51511])speciation:0.378426[&&NHX:D=N:B=100:T=7718:DD=],(ENSCING00000001960_CintENSCINP00000003956:0.141945[&&NHX:D=N:T=7719],ENSCSAVG00000009964_CsavENSCSAVP00000016940:0.26284[&&NHX:D=N:T=51511])speciation:0.525939[&&NHX:D=N:T=7718:B=100:DD=])duplication:0.603292[&&NHX:D=Y:B=100:T=7718])duplication:0.0[&&NHX:D=N:T=7711:B=0:DD=];\",\n            \"LRF2\" : \"((((((((((((((((((TP53_AmelENSAMEP00000017825:0.0263[&&NHX:D=N:T=9646],TP53_MpfuENSMPUP00000008945:0.066538[&&NHX:D=N:T=9669])speciation:0.032561[&&NHX:D=N:B=99:T=379584:DD=],TP53_CfamENSCAFP00000024579:0.086484[&&NHX:D=N:T=9615])speciation:0.034068[&&NHX:D=N:B=81:T=379584:DD=],TP53_FcatENSFCAP00000008925:0.06619[&&NHX:D=N:T=9685])speciation:0.025911[&&NHX:D=N:B=31:T=33554:DD=],TP53_EcabENSECAP00000006210:0.04971[&&NHX:D=N:T=9796])speciation:0.01224[&&NHX:D=N:T=314145:B=17:DD=],(((TP53_BtauENSBTAP00000001420:0.043108[&&NHX:D=N:T=9913],TP53_OariENSOARP00000016707:0.049064[&&NHX:D=N:T=9940])speciation:0.055294[&&NHX:D=N:B=98:T=9895:DD=],TP53_TtruENSTTRP00000009721:0.022529[&&NHX:D=N:T=9739])speciation:0.022515[&&NHX:D=N:T=91561:B=39:DD=],TP53_SscrENSSSCP00000019016:0.065797[&&NHX:D=N:T=9823])speciation:0.020972[&&NHX:D=N:T=91561:B=35:DD=])speciation:0.006996[&&NHX:D=N:B=9:T=314145:DD=],TP53_SaraENSSARP00000005616:0.149927[&&NHX:D=N:T=42254])speciation:0.013221[&&NHX:D=N:T=314145:B=7:DD=],TP53_PvamENSPVAP00000015400:0.117578[&&NHX:D=N:T=132908])speciation:0.0[&&NHX:D=N:B=1:T=314145:DD=],((ENSMLUG00000006411_MlucENSMLUP00000005861:0.003702[&&NHX:D=N:T=59463],ENSMLUG00000025140_MlucENSMLUP00000016733:0.12569[&&NHX:D=N:T=59463])duplication:0.131525[&&NHX:D=Y:T=59463:B=100],TP53_EeurENSEEUP00000013295:0.183463[&&NHX:D=N:T=9365])speciation:0.042602[&&NHX:D=N:T=314145:B=33:DD=])duplication:0.018327[&&NHX:DD=Y:T=314145:B=0:D=],(((((Trp53_MmusENSMUSP00000104298:0.002681[&&NHX:D=N:T=10090],Trp53_MsspMGP_SPRETEiJ_P0028933:0.017851[&&NHX:D=N:T=10096])speciation:0.064969[&&NHX:D=N:B=100:T=862507:DD=],Tp53_RnorENSRNOP00000074031:0.079068[&&NHX:D=N:T=10116])speciation:0.12872[&&NHX:D=N:T=39107:B=100:DD=],LOC100910954_RnorENSRNOP00000064177:0.056502[&&NHX:D=N:T=10116])duplication:0.0[&&NHX:D=Y:B=5:T=39107],TP53_OpriENSOPRP00000005906:0.185911[&&NHX:D=N:T=9978])speciation:0.0[&&NHX:D=N:T=314147:B=0:DD=],((((TP53_MmurENSMICP00000039812:0.054544[&&NHX:D=N:T=30608],TP53_OgarENSOGAP00000015106:0.095719[&&NHX:D=N:T=30611])speciation:0.012762[&&NHX:D=N:B=52:T=376911:DD=],((((((TP53_HsapENSP00000269305:0.0[&&NHX:D=N:T=9606],TP53_GgorENSGGOP00000009561:0.002907[&&NHX:D=N:T=9595])speciation:0.001345[&&NHX:D=N:B=61:T=207598:DD=],TP53_PtroENSPTRP00000014836:0.000592[&&NHX:D=N:T=9598])speciation:0.00877[&&NHX:D=N:B=61:T=207598:DD=],TP53_PabeENSPPYP00000008923:0.009552[&&NHX:D=N:T=9601])speciation:4.8e-05[&&NHX:D=N:T=9604:B=100:DD=],TP53_NleuENSNLEP00000011861:0.032229[&&NHX:D=N:T=61853])speciation:0.004444[&&NHX:D=N:T=314295:B=97:DD=],((TP53_PanuENSPANP00000019643:0.007102[&&NHX:D=N:T=9555],TP53_CsabENSCSAP00000007551:0.010543[&&NHX:D=N:T=60711])speciation:0.000953[&&NHX:D=N:B=100:T=9528:DD=],TP53_MmulENSMMUP00000035274:0.043449[&&NHX:D=N:T=9544])speciation:0.019535[&&NHX:D=N:T=9528:B=55:DD=])speciation:0.013822[&&NHX:D=N:T=9526:B=52:DD=],TP53_CjacENSCJAP00000027663:0.047099[&&NHX:D=N:T=9483])speciation:0.027286[&&NHX:D=N:B=57:T=314293:DD=])speciation:0.013265[&&NHX:D=N:T=9443:B=4:DD=],TP53_TbelENSTBEP00000010189:0.222843[&&NHX:D=N:T=37347])speciation:0.008121[&&NHX:D=N:B=0:T=314146:DD=],((TP53_ItriENSSTOP00000019678:0.08339[&&NHX:D=N:T=43179],Tp53_CporENSCPOP00000012841:0.120892[&&NHX:D=N:T=10141])speciation:0.018406[&&NHX:D=N:T=9989:B=42:DD=],(ENSOCUG00000001138_OcunENSOCUP00000000989:0.013142[&&NHX:D=N:T=9986],ENSOCUG00000022109_OcunENSOCUP00000025959:0.090881[&&NHX:D=N:T=9986])duplication:0.069194[&&NHX:D=Y:T=9986:B=97])speciation:0.015339[&&NHX:D=N:T=314147:B=15:DD=])speciation:0.019539[&&NHX:D=N:B=0:T=314146:DD=])duplication:0.026935[&&NHX:DD=Y:T=314146:B=0:D=])speciation:0.017095[&&NHX:D=N:T=1437010:B=0:DD=],((((((((ENSLAFG00000028692_LafrENSLAFP00000023554:0.00886[&&NHX:D=N:T=9785],ENSLAFG00000030880_LafrENSLAFP00000027441:0.052436[&&NHX:D=N:T=9785])duplication:0.006909[&&NHX:D=Y:B=0:T=9785],ENSLAFG00000030555_LafrENSLAFP00000027808:0.044446[&&NHX:D=N:T=9785])duplication:0.003043[&&NHX:D=Y:T=9785:B=0],(ENSLAFG00000028299_LafrENSLAFP00000024998:0.011792[&&NHX:D=N:T=9785],ENSLAFG00000032042_LafrENSLAFP00000023389:0.017693[&&NHX:D=N:T=9785])duplication:0.015904[&&NHX:D=Y:T=9785:B=74])duplication:0.0[&&NHX:D=Y:B=0:T=9785],(((ENSLAFG00000027365_LafrENSLAFP00000025852:0.011873[&&NHX:D=N:T=9785],ENSLAFG00000026238_LafrENSLAFP00000027253:0.026457[&&NHX:D=N:T=9785])duplication:0.019571[&&NHX:D=Y:T=9785:B=81],ENSLAFG00000027669_LafrENSLAFP00000028793:0.027495[&&NHX:D=N:T=9785])duplication:0.016599[&&NHX:D=Y:T=9785:B=70],ENSLAFG00000027820_LafrENSLAFP00000028173:0.058133[&&NHX:D=N:T=9785])duplication:0.031788[&&NHX:D=Y:T=9785:B=87])duplication:0.038135[&&NHX:D=Y:T=9785:B=10],(ENSLAFG00000027348_LafrENSLAFP00000027515:0.028441[&&NHX:D=N:T=9785],ENSLAFG00000027474_LafrENSLAFP00000018379:0.03464[&&NHX:D=N:T=9785])duplication:0.131904[&&NHX:D=Y:B=100:T=9785])duplication:0.082412[&&NHX:D=Y:T=9785:B=96],ENSLAFG00000007483_LafrENSLAFP00000006292:0.058399[&&NHX:D=N:T=9785])duplication:0.0075[&&NHX:D=Y:T=9785:B=23],TP53_PcapENSPCAP00000011892:0.114307[&&NHX:D=N:T=9813])speciation:0.010282[&&NHX:D=N:T=311790:B=18:DD=],(ENSETEG00000008987_EtelENSETEP00000007296:0.0[&&NHX:D=N:T=9371],ENSETEG00000009984_EtelENSETEP00000008111:0.105253[&&NHX:D=N:T=9371])duplication:0.154739[&&NHX:D=Y:B=100:T=9371])speciation:0.044399[&&NHX:D=N:T=311790:B=35:DD=])speciation:0.041158[&&NHX:D=N:B=0:T=9347:DD=],TP53_DnovENSDNOP00000004075:0.078395[&&NHX:D=N:T=9361])speciation:0.080059[&&NHX:D=N:B=0:T=9347:DD=],((TP53_SharENSSHAP00000018268:0.0496[&&NHX:D=N:T=9305],ENSMODG00000007271_MdomENSMODP00000009014:0.172546[&&NHX:D=N:T=13616])speciation:0.024952[&&NHX:D=N:T=9263:B=83:DD=],ENSMEUG00000013135_MeugENSMEUP00000011978:0.069167[&&NHX:D=N:T=9315])speciation:0.225429[&&NHX:D=N:B=83:T=9263:DD=])speciation:0.228895[&&NHX:D=N:B=81:T=32525:DD=],tp53_XtroENSXETP00000053759:0.483686[&&NHX:D=N:T=8364])speciation:0.095084[&&NHX:D=N:B=55:T=32523:DD=],(TP53_PsinENSPSIP00000014905:0.228951[&&NHX:D=N:T=13735],ENSOANG00000011981_OanaENSOANP00000018980:0.553865[&&NHX:D=N:T=9258])speciation:0.126185[&&NHX:D=N:B=48:T=32524:DD=])duplication:0.03737[&&NHX:DD=Y:B=17:T=32523:D=],TP53_LchaENSLACP00000015915:0.317935[&&NHX:D=N:T=7897])speciation:0.062274[&&NHX:D=N:B=13:T=8287:DD=],(((tp53_DrerENSDARP00000051548:0.365455[&&NHX:D=N:T=7955],tp53_AmexENSAMXP00000021366:0.579505[&&NHX:D=N:T=7994])speciation:0.105036[&&NHX:D=N:B=46:T=186626:DD=],((((((tp53_TrubENSTRUP00000030645:0.158124[&&NHX:D=N:T=31033],tp53_TnigENSTNIP00000013035:0.25403[&&NHX:D=N:T=99883])speciation:0.1396[&&NHX:D=N:T=31031:B=100:DD=],tp53_OlatENSORLP00000008029:0.359414[&&NHX:D=N:T=8090])speciation:0.040022[&&NHX:D=N:T=1489872:B=1:DD=],(tp53_GacuENSGACP00000025614:0.249641[&&NHX:D=N:T=69293],tp53_OnilENSONIP00000023874:0.251831[&&NHX:D=N:T=8128])speciation:0.085834[&&NHX:D=N:T=1489872:B=100:DD=])duplication:0.070104[&&NHX:DD=Y:T=1489872:B=0:D=],(tp53_PforENSPFOP00000007556:0.070709[&&NHX:D=N:T=48698],tp53_XmacENSXMAP00000015753:0.165631[&&NHX:D=N:T=8083])speciation:0.290725[&&NHX:D=N:B=100:T=586240:DD=])duplication:0.058888[&&NHX:DD=Y:B=2:T=1489872:D=],ENSGMOG00000007755_GmorENSGMOP00000008291:0.272843[&&NHX:D=N:T=8049])speciation:0.143728[&&NHX:D=N:T=123368:B=3:DD=],TP531ofmany_AmexENSAMXP00000007265:0.383807[&&NHX:D=N:T=7994])speciation:0.129809[&&NHX:D=N:T=186625:B=41:DD=])duplication:0.079851[&&NHX:D=Y:B=6:T=186625],tp53_LocuENSLOCP00000017063:0.263043[&&NHX:D=N:T=7918])speciation:0.079504[&&NHX:D=N:T=41665:B=5:DD=])speciation:0.205725[&&NHX:D=N:B=10:T=117571:DD=],ENSPMAG00000009535_PmarENSPMAP00000010479:0.363682[&&NHX:D=N:T=7757])speciation:0.005138[&&NHX:D=N:B=0:T=7742:DD=],((((((((((((TP63_MgalENSMGAP00000001036:0.00675[&&NHX:D=N:T=9103],TP63_GgalENSGALP00000032705:0.02786[&&NHX:D=N:T=9031])speciation:0.018196[&&NHX:D=N:B=100:T=9005:DD=],TP63_AplaENSAPLP00000012746:0.025285[&&NHX:D=N:T=8839])speciation:0.020559[&&NHX:D=N:B=100:T=1549675:DD=],(TP63_TgutENSTGUP00000009686:0.018245[&&NHX:D=N:T=59729],TP63_FalbENSFALP00000007718:0.02902[&&NHX:D=N:T=59894])speciation:0.022707[&&NHX:D=N:B=100:T=9126:DD=])speciation:0.046097[&&NHX:D=N:T=8825:B=100:DD=],TP63_PsinENSPSIP00000018044:0.123057[&&NHX:D=N:T=13735])speciation:0.005555[&&NHX:D=N:T=1329799:B=37:DD=],TP63_AcarENSACAP00000000376:0.736631[&&NHX:D=N:T=28377])speciation:0.010123[&&NHX:D=N:B=0:T=32561:DD=],(((((((((((Trp63_MmusENSMUSP00000110965:0.000847[&&NHX:D=N:T=10090],Trp63_MsspMGP_SPRETEiJ_P0042982:0.004734[&&NHX:D=N:T=10096])speciation:0.021561[&&NHX:D=N:B=100:T=862507:DD=],Tp63_RnorENSRNOP00000033463:0.030383[&&NHX:D=N:T=10116])speciation:0.048568[&&NHX:D=N:T=39107:B=100:DD=],Trp63_DordENSDORP00000001930:0.044582[&&NHX:D=N:T=10020])speciation:0.014056[&&NHX:D=N:B=17:T=33553:DD=],TP63_ItriENSSTOP00000012357:0.057295[&&NHX:D=N:T=43179])speciation:0.000474[&&NHX:D=N:T=33553:B=0:DD=],TP63_CporENSCPOP00000013308:0.058396[&&NHX:D=N:T=10141])speciation:0.003336[&&NHX:D=N:B=0:T=9989:DD=],TP63_OpriENSOPRP00000002632:0.076764[&&NHX:D=N:T=9978])speciation:0.001386[&&NHX:D=N:B=0:T=314147:DD=],(TP63_OcunENSOCUP00000014157:0.04305[&&NHX:D=N:T=9986],TP63_OgarENSOGAP00000003415:0.053686[&&NHX:D=N:T=30611])speciation:0.018263[&&NHX:D=N:B=56:T=314146:DD=])duplication:0.0[&&NHX:DD=Y:T=314146:B=0:D=],TP63_TbelENSTBEP00000003655:0.050557[&&NHX:D=N:T=37347])speciation:0.000127[&&NHX:D=N:B=0:T=314146:DD=],(((((((TP63_PvamENSPVAP00000008543:0.02784[&&NHX:D=N:T=132908],TP63_MlucENSMLUP00000014213:0.029592[&&NHX:D=N:T=59463])speciation:0.007063[&&NHX:D=N:B=37:T=9397:DD=],(((TP63_AmelENSAMEP00000000831:0.015923[&&NHX:D=N:T=9646],TP63_CfamENSCAFP00000020585:0.020935[&&NHX:D=N:T=9615])speciation:0.003042[&&NHX:D=N:T=379584:B=80:DD=],TP63_MpfuENSMPUP00000003407:0.032827[&&NHX:D=N:T=9669])speciation:0.009414[&&NHX:D=N:B=64:T=379584:DD=],TP63_FcatENSFCAP00000000731:0.02322[&&NHX:D=N:T=9685])speciation:0.017067[&&NHX:D=N:T=33554:B=74:DD=])speciation:0.001436[&&NHX:D=N:T=314145:B=0:DD=],((((TP63_BtauENSBTAP00000020544:0.005072[&&NHX:D=N:T=9913],TP63_OariENSOARP00000021997:0.009983[&&NHX:D=N:T=9940])speciation:0.025469[&&NHX:D=N:T=9895:B=100:DD=],TP63_TtruENSTTRP00000011034:0.022489[&&NHX:D=N:T=9739])speciation:0.005877[&&NHX:D=N:B=58:T=91561:DD=],TP63_SscrENSSSCP00000025960:0.02089[&&NHX:D=N:T=9823])speciation:0.005665[&&NHX:D=N:B=29:T=91561:DD=],TP63_VpacENSVPAP00000011479:0.032735[&&NHX:D=N:T=30538])speciation:0.007589[&&NHX:D=N:B=13:T=91561:DD=])speciation:0.001552[&&NHX:D=N:B=0:T=314145:DD=],(TP63_EcabENSECAP00000016315:0.020605[&&NHX:D=N:T=9796],TP63_EeurENSEEUP00000012623:0.068478[&&NHX:D=N:T=9365])speciation:0.015388[&&NHX:D=N:B=15:T=314145:DD=])speciation:0.00388[&&NHX:D=N:T=314145:B=0:DD=],((((((((TP63_HsapENSP00000264731:0.001872[&&NHX:D=N:T=9606],TP63_GgorENSGGOP00000020551:0.002754[&&NHX:D=N:T=9595])speciation:0.000918[&&NHX:D=N:T=207598:B=46:DD=],TP63_PtroENSPTRP00000027067:0.001869[&&NHX:D=N:T=9598])speciation:0.002874[&&NHX:D=N:T=207598:B=46:DD=],TP63_PabeENSPPYP00000016106:0.004542[&&NHX:D=N:T=9601])speciation:0.000913[&&NHX:D=N:T=9604:B=70:DD=],TP63_NleuENSNLEP00000008197:0.004734[&&NHX:D=N:T=61853])speciation:0.000949[&&NHX:D=N:T=314295:B=66:DD=],((TP63_MmulENSMMUP00000038274:0.003714[&&NHX:D=N:T=9544],TP63_CsabENSCSAP00000005295:0.026509[&&NHX:D=N:T=60711])speciation:0.0[&&NHX:D=N:B=31:T=9528:DD=],TP63_PanuENSPANP00000003169:0.001823[&&NHX:D=N:T=9555])speciation:0.010162[&&NHX:D=N:B=31:T=9528:DD=])speciation:0.010185[&&NHX:D=N:T=9526:B=95:DD=],TP63_CjacENSCJAP00000026376:0.015601[&&NHX:D=N:T=9483])speciation:0.013295[&&NHX:D=N:T=314293:B=100:DD=],TP63_MmurENSMICP00000022696:0.021271[&&NHX:D=N:T=30608])speciation:0.0[&&NHX:D=N:B=42:T=9443:DD=],(TP63_TsyrENSTSYP00000003403:0.025783[&&NHX:D=N:T=1868482],TP63_SaraENSSARP00000011553:0.056367[&&NHX:D=N:T=42254])speciation:0.010618[&&NHX:D=N:B=14:T=1437010:DD=])duplication:0.006497[&&NHX:DD=Y:B=1:T=1437010:D=])duplication:0.0[&&NHX:DD=Y:B=0:T=1437010:D=],(TP63_DnovENSDNOP00000012853:0.025753[&&NHX:D=N:T=9361],TP63_ChofENSCHOP00000009300:0.040693[&&NHX:D=N:T=9358])speciation:0.020456[&&NHX:D=N:B=76:T=9348:DD=])speciation:0.001941[&&NHX:D=N:T=9347:B=0:DD=],((TP63_LafrENSLAFP00000020806:0.016207[&&NHX:D=N:T=9785],TP63_PcapENSPCAP00000004708:0.030306[&&NHX:D=N:T=9813])speciation:0.00755[&&NHX:D=N:T=311790:B=91:DD=],TP63_EtelENSETEP00000001864:0.071017[&&NHX:D=N:T=9371])speciation:0.015236[&&NHX:D=N:T=311790:B=8:DD=])speciation:0.007477[&&NHX:D=N:B=0:T=9347:DD=])duplication:0.052158[&&NHX:DD=Y:B=0:T=9347:D=],((TP63_MdomENSMODP00000018831:0.034607[&&NHX:D=N:T=13616],TP63_MeugENSMEUP00000014131:0.045944[&&NHX:D=N:T=9315])speciation:0.011561[&&NHX:D=N:T=9263:B=100:DD=],TP63_SharENSSHAP00000008666:0.303146[&&NHX:D=N:T=9305])speciation:0.054652[&&NHX:D=N:B=12:T=9263:DD=])speciation:0.017647[&&NHX:D=N:B=2:T=32525:DD=],TP63_OanaENSOANP00000021753:0.079276[&&NHX:D=N:T=9258])speciation:0.043447[&&NHX:D=N:T=40674:B=2:DD=])speciation:0.034349[&&NHX:D=N:T=32524:B=0:DD=],tp63_XtroENSXETP00000055541:0.267401[&&NHX:D=N:T=8364])speciation:0.032348[&&NHX:D=N:B=0:T=32523:DD=],(ENSACAG00000002961_AcarENSACAP00000002870:0.0[&&NHX:D=N:T=28377],ENSACAG00000022533_AcarENSACAP00000021196:1.16541[&&NHX:D=N:T=28377])duplication:0.116614[&&NHX:D=Y:T=28377:B=0])duplication:0.005373[&&NHX:D=Y:T=32523:B=0],TP63_LchaENSLACP00000022643:0.17787[&&NHX:D=N:T=7897])speciation:0.031924[&&NHX:D=N:T=8287:B=0:DD=],(((((((tp63_PforENSPFOP00000001124:0.014737[&&NHX:D=N:T=48698],tp63_XmacENSXMAP00000016461:0.044393[&&NHX:D=N:T=8083])speciation:0.052269[&&NHX:D=N:B=99:T=586240:DD=],tp63_OlatENSORLP00000019616:0.105223[&&NHX:D=N:T=8090])speciation:0.020917[&&NHX:D=N:B=24:T=1489913:DD=],tp63_OnilENSONIP00000024326:0.065197[&&NHX:D=N:T=8128])speciation:0.01928[&&NHX:D=N:T=1489908:B=16:DD=],(tp63_TnigENSTNIP00000016776:0.042973[&&NHX:D=N:T=99883],tp63_TrubENSTRUP00000008025:0.048688[&&NHX:D=N:T=31033])speciation:0.043668[&&NHX:D=N:B=100:T=31031:DD=])speciation:0.020832[&&NHX:D=N:B=77:T=1489872:DD=],(ENSGACG00000013629_GacuENSGACP00000018012:0.069577[&&NHX:D=N:T=69293],ENSGMOG00000000413_GmorENSGMOP00000000401:0.110102[&&NHX:D=N:T=8049])speciation:0.067443[&&NHX:D=N:B=97:T=123368:DD=])duplication:0.040724[&&NHX:DD=Y:B=65:T=123368:D=],(tp63_AmexENSAMXP00000004961:0.092792[&&NHX:D=N:T=7994],tp63_DrerENSDARP00000108362:0.121291[&&NHX:D=N:T=7955])speciation:0.046115[&&NHX:D=N:T=186626:B=86:DD=])speciation:0.034365[&&NHX:D=N:T=186625:B=37:DD=],tp63_LocuENSLOCP00000006202:0.102939[&&NHX:D=N:T=7918])speciation:0.049371[&&NHX:D=N:B=52:T=41665:DD=])speciation:0.110844[&&NHX:D=N:B=0:T=117571:DD=],(((((((((((TP73_LafrENSLAFP00000005892:0.029578[&&NHX:D=N:T=9785],TP73_PcapENSPCAP00000000662:0.051492[&&NHX:D=N:T=9813])speciation:0.003183[&&NHX:D=N:T=311790:B=90:DD=],TP73_EtelENSETEP00000007165:0.095673[&&NHX:D=N:T=9371])speciation:0.033805[&&NHX:D=N:T=311790:B=0:DD=],TP73_DnovENSDNOP00000028722:0.457081[&&NHX:D=N:T=9361])speciation:0.006287[&&NHX:D=N:B=0:T=9347:DD=],((((((((TP73_BtauENSBTAP00000007643:0.009498[&&NHX:D=N:T=9913],TP73_OariENSOARP00000017005:0.019572[&&NHX:D=N:T=9940])speciation:0.012531[&&NHX:D=N:T=9895:B=100:DD=],ENSSSCG00000025685_SscrENSSSCP00000022771:0.057187[&&NHX:D=N:T=9823])speciation:0.018712[&&NHX:D=N:T=91561:B=1:DD=],TP73_TtruENSTTRP00000003223:0.039795[&&NHX:D=N:T=9739])speciation:0.015091[&&NHX:D=N:T=91561:B=0:DD=],(((TP73_AmelENSAMEP00000009745:0.040276[&&NHX:D=N:T=9646],TP73_MpfuENSMPUP00000007349:0.069423[&&NHX:D=N:T=9669])speciation:0.011068[&&NHX:D=N:B=5:T=379584:DD=],TP73_CfamENSCAFP00000028819:0.025289[&&NHX:D=N:T=9615])speciation:0.003214[&&NHX:D=N:B=4:T=379584:DD=],TP73_FcatENSFCAP00000010792:0.059719[&&NHX:D=N:T=9685])speciation:0.021832[&&NHX:D=N:B=20:T=33554:DD=])speciation:0.009094[&&NHX:D=N:T=314145:B=0:DD=],TP73_PvamENSPVAP00000008433:0.078992[&&NHX:D=N:T=132908])speciation:0.005352[&&NHX:D=N:T=314145:B=0:DD=],TP73_EeurENSEEUP00000011975:0.098606[&&NHX:D=N:T=9365])speciation:0.0[&&NHX:D=N:B=0:T=314145:DD=],TP73_EcabENSECAP00000001313:0.038035[&&NHX:D=N:T=9796])speciation:0.007356[&&NHX:D=N:T=314145:B=0:DD=],((((((Trp73_MsspMGP_SPRETEiJ_P0068738:0.0082[&&NHX:D=N:T=10096],Trp73_MmusENSMUSP00000101269:0.011834[&&NHX:D=N:T=10090])speciation:0.027464[&&NHX:D=N:B=100:T=862507:DD=],Tp73_RnorENSRNOP00000052265:0.034464[&&NHX:D=N:T=10116])speciation:0.085459[&&NHX:D=N:T=39107:B=100:DD=],TP73_ItriENSSTOP00000022492:0.061184[&&NHX:D=N:T=43179])speciation:0.008334[&&NHX:D=N:B=2:T=33553:DD=],Trp73_DordENSDORP00000013966:0.076743[&&NHX:D=N:T=10020])speciation:0.0[&&NHX:D=N:T=33553:B=0:DD=],TP73_CporENSCPOP00000009800:0.075508[&&NHX:D=N:T=10141])speciation:0.004958[&&NHX:D=N:T=9989:B=0:DD=],((TP73_MmurENSMICP00000031305:0.033995[&&NHX:D=N:T=30608],TP73_OgarENSOGAP00000005402:0.043894[&&NHX:D=N:T=30611])speciation:0.017054[&&NHX:D=N:T=376911:B=93:DD=],((((((TP73_GgorENSGGOP00000015180:0.00182[&&NHX:D=N:T=9595],TP73_HsapENSP00000367545:0.005775[&&NHX:D=N:T=9606])speciation:0.0[&&NHX:D=N:T=207598:B=92:DD=],TP73_PtroENSPTRP00000000118:0.05274[&&NHX:D=N:T=9598])speciation:0.005412[&&NHX:D=N:B=81:T=207598:DD=],TP73_PabeENSPPYP00000002277:0.013149[&&NHX:D=N:T=9601])speciation:0.000495[&&NHX:D=N:B=30:T=9604:DD=],TP73_NleuENSNLEP00000009887:0.326917[&&NHX:D=N:T=61853])speciation:0.010918[&&NHX:D=N:T=314295:B=0:DD=],((TP73_PanuENSPANP00000007545:0.004788[&&NHX:D=N:T=9555],TP73_CsabENSCSAP00000017283:0.012519[&&NHX:D=N:T=60711])speciation:0.000519[&&NHX:D=N:T=9528:B=86:DD=],TP73_MmulENSMMUP00000040655:0.025402[&&NHX:D=N:T=9544])speciation:0.013713[&&NHX:D=N:B=75:T=9528:DD=])speciation:0.010332[&&NHX:D=N:T=9526:B=0:DD=],TP73_CjacENSCJAP00000005070:0.291972[&&NHX:D=N:T=9483])speciation:0.022859[&&NHX:D=N:B=0:T=314293:DD=])speciation:0.014731[&&NHX:D=N:B=0:T=9443:DD=])speciation:0.020217[&&NHX:D=N:T=314146:B=0:DD=])speciation:0.01086[&&NHX:D=N:T=1437010:B=0:DD=])speciation:0.048685[&&NHX:D=N:T=9347:B=0:DD=],ENSSSCG00000003361_SscrENSSSCP00000003644:0.097446[&&NHX:D=N:T=9823])duplication:0.016508[&&NHX:D=Y:T=9347:B=0],((TP73_MeugENSMEUP00000000705:0.023362[&&NHX:D=N:T=9315],TP73_MdomENSMODP00000008216:0.259151[&&NHX:D=N:T=13616])speciation:0.035881[&&NHX:D=N:B=57:T=9263:DD=],TP73_SharENSSHAP00000006513:0.042193[&&NHX:D=N:T=9305])speciation:0.069704[&&NHX:D=N:T=9263:B=36:DD=])speciation:0.023293[&&NHX:D=N:T=32525:B=2:DD=],TP73_OanaENSOANP00000019815:0.30572[&&NHX:D=N:T=9258])speciation:0.017992[&&NHX:D=N:B=0:T=40674:DD=],(((((TP73_GgalENSGALP00000001485:0.002093[&&NHX:D=N:T=9031],TP73_MgalENSMGAP00000001059:0.036491[&&NHX:D=N:T=9103])speciation:0.047733[&&NHX:D=N:T=9005:B=100:DD=],TP73_AplaENSAPLP00000003415:0.02254[&&NHX:D=N:T=8839])speciation:0.021618[&&NHX:D=N:T=1549675:B=97:DD=],(TP73_TgutENSTGUP00000002829:0.010561[&&NHX:D=N:T=59729],TP73_FalbENSFALP00000010031:0.030208[&&NHX:D=N:T=59894])speciation:0.023763[&&NHX:D=N:T=9126:B=100:DD=])speciation:0.016346[&&NHX:D=N:B=97:T=8825:DD=],TP73_PsinENSPSIP00000004448:0.109544[&&NHX:D=N:T=13735])speciation:0.026517[&&NHX:D=N:T=1329799:B=84:DD=],TP73_AcarENSACAP00000001746:0.128451[&&NHX:D=N:T=28377])speciation:0.019965[&&NHX:D=N:B=67:T=32561:DD=])speciation:0.036745[&&NHX:D=N:T=32524:B=15:DD=],tp73_XtroENSXETP00000010981:0.182635[&&NHX:D=N:T=8364])speciation:0.011019[&&NHX:D=N:B=1:T=32523:DD=],TP73_LchaENSLACP00000021702:0.142378[&&NHX:D=N:T=7897])speciation:0.024057[&&NHX:D=N:B=0:T=8287:DD=],((((((tp73_TnigENSTNIP00000014938:0.027328[&&NHX:D=N:T=99883],tp73_TrubENSTRUP00000038165:0.032469[&&NHX:D=N:T=31033])speciation:0.059199[&&NHX:D=N:T=31031:B=100:DD=],tp73_GacuENSGACP00000008676:0.048591[&&NHX:D=N:T=69293])speciation:0.007086[&&NHX:D=N:T=1489922:B=29:DD=],(((tp73_PforENSPFOP00000010896:0.013197[&&NHX:D=N:T=48698],tp73_XmacENSXMAP00000017403:0.030558[&&NHX:D=N:T=8083])speciation:0.063838[&&NHX:D=N:B=100:T=586240:DD=],tp73_OlatENSORLP00000005521:0.062083[&&NHX:D=N:T=8090])speciation:0.017304[&&NHX:D=N:B=58:T=1489913:DD=],tp73_OnilENSONIP00000002627:0.053778[&&NHX:D=N:T=8128])speciation:0.014746[&&NHX:D=N:T=1489908:B=29:DD=])speciation:0.072637[&&NHX:D=N:B=14:T=1489872:DD=],tp73_GmorENSGMOP00000016675:0.181445[&&NHX:D=N:T=8049])speciation:0.038065[&&NHX:D=N:T=123368:B=98:DD=],(tp73_AmexENSAMXP00000014358:0.086906[&&NHX:D=N:T=7994],tp73_DrerENSDARP00000109674:0.134572[&&NHX:D=N:T=7955])speciation:0.064476[&&NHX:D=N:T=186626:B=100:DD=])speciation:0.04364[&&NHX:D=N:T=186625:B=43:DD=],tp73_LocuENSLOCP00000006343:0.115822[&&NHX:D=N:T=7918])speciation:0.046704[&&NHX:D=N:T=41665:B=14:DD=])speciation:0.167736[&&NHX:D=N:T=117571:B=27:DD=])duplication:0.067299[&&NHX:D=Y:B=0:T=117571],tp63_PmarENSPMAP00000007639:0.797694[&&NHX:D=N:T=7757])speciation:0.076045[&&NHX:D=N:T=7742:B=0:DD=],(('p53/p73-b CintENSCINP00000004447':0.450754[&&NHX:D=N:T=7719],ENSCSAVG00000009788_CsavENSCSAVP00000016659:0.47517[&&NHX:D=N:T=51511])speciation:0.378426[&&NHX:D=N:B=100:T=7718:DD=],(ENSCING00000001960_CintENSCINP00000003956:0.141945[&&NHX:D=N:T=7719],ENSCSAVG00000009964_CsavENSCSAVP00000016940:0.26284[&&NHX:D=N:T=51511])speciation:0.525939[&&NHX:D=N:T=7718:B=100:DD=])duplication:0.603292[&&NHX:D=Y:B=100:T=7718])duplication:0.0[&&NHX:D=N:T=7711:B=0:DD=];\",\n        }\n\n        // this make able the corner placement for all UI elements inside\n        this.container_d3.style('position', 'relative')\n\n        // remove previous placeholder & UI\n        this.container_d3.selectAll(\".corner_placeholder\").remove()\n        this.container_d3.selectAll(\".modal_data\").remove()\n        this.remove_scale()\n        this.remove_color_legend('node')\n        this.remove_color_legend('leaf')\n        this.container_d3.selectAll(\".menu_settings\").remove()\n        this.container_d3.selectAll(\".empty_message\").remove()\n        this.container_d3.select('#histogram-legend').remove();\n\n        this.container_d3.select(\"#menu-node\").remove()\n\n/*\n        if (phylo.phylo_embedded &&  !empty_mode){\n\n                tooltip_object[0].hide()\n                tooltip_object[3].hide()\n\n\n        }\n\n\n */\n\n\n        if (empty_mode){\n            this.top_left = this.add_top_left_container()\n            this.add_data_icon()\n            this.add_empty_message()\n            return\n        }\n\n        // Create corner placeholder for UI elements\n        this.bottom_left = this.add_bottom_left_container()\n        this.bottom_right = this.add_bottom_right_container()\n        this.top_left = this.add_top_left_container()\n        this.top_right = this.add_top_right_container()\n\n        // BOTTOM LEFT\n        if (this.viewer.model.settings.use_branch_lenght) {\n            this.scale_text = this.add_scale()\n        }\n        this.loader = this.bottom_left.append('text').style('color', 'red').style('font-size', 'small')\n        if (this.container_object.message_loader){\n            this.update_loader_message()\n        }\n        //this.add_root_badge()\n\n        // BOTTOM RIGHT\n\n        if (this.viewer.model.big_tree){\n            this.add_rescale_zoom()\n        }\n        this.add_maximise()\n        this.add_fit_height()\n        this.add_zoom()\n\n        // TOP LEFT\n        if (!this.api.settings.phylostratigraphy) {\n            if (this.container_object.models.length > 0) {\n                this.add_toggle()\n            }\n            this.add_data_icon()\n        }\n\n        // TOP RIGHT\n        this.add_search()\n        this.add_export()\n        this.add_meta()\n        this.add_settings()\n        this.add_undo()\n\n        // COLOR LEGEND\n        if (this.api.settings.compareMode || (this.viewer.model.settings.style.color_accessor['node'] !== null && this.viewer.model.settings.style.color_accessor['node'] !== 'Topology'  )){\n            this.add_color_legend('node')\n        }\n\n        if (this.viewer.model.settings.style.color_accessor['leaf'] !== null){\n            this.viewer.set_color_scale('leaf')\n            this.add_color_legend('leaf')\n        }\n\n        // Add Stack\n        if (this.viewer.model.settings.has_histogram_data && this.viewer.model.settings.show_histogram){\n\n            this.add_histogram_legend();\n\n        }\n\n\n\n    }\n\n    // PLACEHOLDER\n    add_bottom_left_container() {\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder bottom left\")\n            .style(\"flex-direction\",  \"column\")\n    }\n    add_bottom_right_container(){\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder bottom right\")\n            .style(\"flex-direction\",  \"column\")\n            .style( \"align-items\", \"flex-end\")\n    }\n    add_top_left_container(){\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder top left\")\n    }\n    add_top_right_container(){\n        var div =  this.container_d3.append(\"div\").attr(\"class\",\"corner_placeholder top right\")\n            .style(\"flex-direction\",'column')\n            .style(\"align-items\",'end')\n\n        this.tr_buttons = div.append(\"div\").attr(\"class\",\"tr-button\").style(\"display\",'flex')\n\n        this.tr_menus = div.append(\"div\").attr(\"class\",\"tr-menus\")\n\n        return div\n    }\n\n    update_loader_message(){\n        this.loader.text(this.container_object.message_loader)\n    }\n\n\n    add_histogram_legend() {\n\n\n        d3__WEBPACK_IMPORTED_MODULE_1__.select('#histogram-legend').remove();\n\n        var width = 230;\n        var height = 80;\n        var svgHeight = height + 25;\n        var legendRectSize = 20;\n        var left_margin = 25;\n        var top_margin = 50;\n\n        if (this.api.settings.phylostratigraphy){\n            top_margin = 25;\n        }\n\n        var legendTxtSize = 13;\n        // center text in the middle of the legend colored rectangle, rounding it to smaller Y-value\n        var legendTxtYPadding = (legendRectSize + legendTxtSize) / 2\n\n        if(this.viewer.model.settings.stack.type == \"genes\"){\n            var dataLabels = [\"Gained\", \"Duplicated\", \"Retained\", \"Lost\" ]\n        } else {\n            var dataLabels = [\"Gains\", \"Duplications\", \"Losses\" ]\n        }\n\n        // to position legends correctly\n        var rects = dataLabels.length - 1;\n\n\n        var legendSvg = this.viewer.svg.append(\"svg\")\n            .attr(\"id\", \"histogram-legend\")\n            .attr(\"x\", left_margin)\n            .attr(\"y\", top_margin)\n            .attr(\"width\", width + \"px\")\n            .attr(\"height\", svgHeight + \"px\")\n            .append(\"g\")\n\n\n        legendSvg.append(\"line\")\n            .attr(\"x1\", 0)\n            .attr(\"y1\", rects * legendRectSize)\n            .attr(\"x2\", 200)\n            .attr(\"y2\", rects * legendRectSize)\n            .attr(\"class\", \"divline\")\n            .attr(\"stroke-width\", 2)\n            .attr(\"stroke\", \"black\");\n\n        legendSvg.selectAll('rect')\n            .data(dataLabels)\n            .enter()\n            .append('rect')\n            .attr('x', 110)\n            .attr('y', function(d, i){\n                return i * legendRectSize;\n            })\n            .attr('width', legendRectSize)\n            .attr('height', legendRectSize)\n            .attr('fill', (d, i, node) => {\n                return this.viewer.settings.stack.colorMap[d];\n            });\n\n        legendSvg.selectAll('text')\n            .data(dataLabels)\n            .enter()\n            .append('text')\n            .text(function(d){\n                return d;\n            })\n            .attr('x', 110 + legendRectSize + 5)\n            .attr('y', function(d, i){\n                return i * legendRectSize + legendTxtYPadding;\n            })\n            .attr('text-anchor', 'start')\n            .attr('alignment-baseline', 'baseline')\n            .attr(\"font-size\", legendTxtSize).attr(\"stroke\", \"black\");\n\n\n        legendSvg\n            .append('text')\n            .attr(\"class\", \"legendGeneTotal\")\n            .text(\"Total # of \"+this.viewer.model.settings.stack.type)\n            .attr('x', 0)\n            .attr('y', rects * legendRectSize - 5)\n            .attr('text-anchor', 'start')\n            .attr(\"font-size\", legendTxtSize).attr(\"stroke\", \"black\");\n\n        d3__WEBPACK_IMPORTED_MODULE_1__.selectAll(\".legendGeneTotal\").moveToFront();\n\n    }\n\n    // DATA ICON\n\n    get_modal_adder_corpus(){\n        return `\n        \n         <div class=\"container-fluid\">\n                                \n                <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 1: Add data from text or file</b> </h5>\n                  \n                  \n                  <div class=\"row\" style=\" margin-left: 24px\">\n                        <div class=\"col\" >\n                            <textarea class=\"form-control\" placeholder=\"Paste or type your tree here\" id=\"exampleFormControlTextarea1s\" rows=\"3\"></textarea>\n\n\n                        </div>\n                        <div class=\"col-1 my-auto \"><p class=\"align-middle\" style=\"margin: 0px;\"><b>OR</b></p></div>\n                        <div class=\"col my-auto\">\n\n                            <div class=\"input-group mb-3\" style=\"padding-left: 24px;\">\n                                <input class=\"form-control\" type=\"file\" id=\"add_tree_file_input\">                                    <div class=\"input-group-append\">\n                            </div>\n                            </div>\n\n\n                        </div>\n                    </div>\n\n                   <div class=\"row\" style=\"margin-left: 24px\">\n                        <div class=\"col\" >\n                            <h6 class=\"card-subtitle mb-2 text-muted\" style=\"margin-top: 6px\"><small>Example: <a href=\"#\" class=\"t1\">tree #1</a>, <a href=\"#\" class=\"t2\">tree #2</a>, <a href=\"#\" class=\"tbig\">big tree</a>, <a href=\"#\" class=\"nhx_ex\">Extended Newick</a>.</small></h6>\n                        </div>\n                    </div>\n                        \n                </div>\n\n         \n                </div>\n                \n                 <br>\n                 \n                 <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 2: Choose tree data format </b> </h5>\n                  \n                  \n                  <div class=\"text-center\">\n\n                        <select class=\"custom-select\" id=\"add_tree_str_select\" style=\"margin-left: 24px;\">\n                            <option selected value=\"newick\">Newick</option>\n                            <option value=\"nhx\">Extended Newick</option>\n                        </select>\n\n\n                    </div>\n\n\n                    \n                </div>\n\n         \n                </div>\n                \n                <br>\n                \n                <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>(Optional) Step 3 : Add a mapping file </b> </h5>\n                  \n                  <br>\n                  \n                  STEP3__\n                  \n       \n                </div>\n\n         \n                </div>\n                \n                <br>\n                 \n                 <div style=\"margin: auto; width: fit-content;\">\n                \n                \n                 <button type=\"button\"  class=\"btn  btn-danger\" data-bs-dismiss=\"modal\">Cancel</button>\n                  <button type=\"button\" id=\"modal_add_tree_final_button\" class=\"btn  btn-success\"  data-bs-dismiss=\"modal\" >Upload tree</button>\n                \n                  </div>\n                \n        </div>\n                \n                \n        `\n    }\n\n\n    add_data_icon(){\n\n        this.container_d3.select(\"#exampleModal\" + this.container_object.uid).remove()\n\n        var b = this.top_left.append('button')\n            .attr('class', '  dashed_button')\n            .attr('id', 'buttonmodal_' + this.container_object.div_id )\n            .attr('data-bs-toggle', 'modal')\n            .attr('data-bs-target', '#exampleModal' + this.container_object.uid)\n            .attr('data-bs-placement', 'right')\n            .attr('title', 'Add a new tree')\n            .append(\"div\")\n            .attr(\"class\",\"label\")\n\n            b.html(\"  <i class='fas fa-plus' style='color:#888'></i> Add tree\")\n\n        let mod_html = this.get_modal_template()\n\n        mod_html = mod_html.replace('TEMPLATE_CORPUS', this.get_modal_adder_corpus())\n        mod_html = mod_html.replace('TITLE_', 'Upload your tree')\n        mod_html = mod_html.replace('SUB_TITLE_', '')\n        mod_html = mod_html.replace('STEP3__', this.get_modal_meta_corpus())\n\n\n\n        mod_html = mod_html.replace('exampleFormControlTextarea1s', 'exampleFormControlTextarea1s' + this.container_object.uid)\n        mod_html = mod_html.replace('add_tree_file_input', 'add_tree_file_input' + this.container_object.uid)\n        mod_html = mod_html.replace('exampleModal', 'exampleModal' + this.container_object.uid)\n        mod_html = mod_html.replace('add_tree_str_select', 'add_tree_str_select' + this.container_object.uid)\n        mod_html = mod_html.replace('modal_add_tree_final_button', 'modal_add_tree_final_button' + this.container_object.uid)\n        mod_html = mod_html.replace('upload_mapping_close', 'upload_mapping_close' + this.container_object.uid)\n        mod_html = mod_html.replace('upload_mapping_validation', 'upload_mapping_validation' + this.container_object.uid)\n\n        // META CORPUS\n\n        mod_html = mod_html.replaceAll('add_meta_file_input', 'tree_adder_modal_add_mapping_file_input' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2', 'tree_adder_mod_meta_card2_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card3', 'tree_adder_mod_meta_card3_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2_radio', 'tree_adder_mod_meta_card2_radio' + this.container_object.uid)\n\n        mod_html = mod_html.replace('flexCheckChecked', 'tree_adder_flexCheckChecked' + this.container_object.uid)\n        mod_html = mod_html.replace('flexCheckDefault', 'tree_adder_flexCheckDefault' + this.container_object.uid)\n\n        mod_html = mod_html.replace('mapping_check_nodes', 'tree_adder_mapping_check_nodes' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_leaf', 'tree_adder_mapping_check_leaf' + this.container_object.uid)\n\n        //\n\n\n\n\n        document.getElementById(this.container_object.div_id).insertAdjacentHTML('afterend',mod_html)\n\n        var modmod = document.getElementById('exampleModal'+ this.container_object.uid);\n\n        var thaty  = this\n\n        const add_tree_helpers = function(container_object, str, format, mapping){\n\n            var mapping = (typeof mapping == 'undefined') ? false : mapping;\n\n            container_object.add_tree(str, {'data_type':format})\n            container_object.current_model =  container_object.models.length-1\n\n            if (mapping !== false){\n\n                let moddy = container_object.models[container_object.current_model]\n\n                moddy.settings.use_meta_for_leaf = mapping.parameters.use_meta_for_leaf\n                moddy.settings.use_meta_for_node = mapping.parameters.use_meta_for_node\n\n                if (moddy.settings.use_meta_for_leaf){\n                    moddy.add_meta_leaves(mapping.meta, mapping.parameters.headers, container_object.api)\n                }\n\n                if (moddy.settings.use_meta_for_node){\n                    moddy.add_meta_nodes(mapping.meta, mapping.parameters.headers, container_object.api)\n                }\n\n            }\n\n\n            document.querySelector('#exampleModal'+ container_object.uid).style.display =  'none'\n            document.querySelectorAll('.modal-backdrop').forEach(elem => {\n                elem.parentNode.removeChild(elem);\n            });\n            container_object.viewer.set_data(container_object.models[container_object.current_model]);\n            container_object.api.stop_all_workers()\n            container_object.compute_topology_and_render_bounded_viewer()\n            container_object.viewer.render(container_object.viewer.hierarchy);\n            //container_object.viewer.update_collapse_level(container_object.models[container_object.current_model].settings.collapse_level)\n\n\n            if (thaty.api.settings.compute_distance && thaty.api.bound_container.includes(thaty)){\n                thaty.api.send_worker_distance()\n            }\n        }\n\n        const add_data_from_modal =  (format) => {\n\n            // mapping information\n            var mapping_file = document.getElementById('tree_adder_modal_add_mapping_file_input' + that.container_object.uid).files[0];\n\n\n            let s = document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value\n\n            if (s.length > 0){\n\n                if (mapping_file) {\n\n                    var parameters = that.get_mapping_parameter_from_UI(true)\n\n                    console.log(parameters)\n                    const reader = new FileReader();\n\n                    reader.addEventListener('load', (event) => {\n\n                        var meta = []\n\n                        if (mapping_file.name.split('.').pop() == 'tsv'){\n                            d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {meta[d.id] = d});\n                        }\n                        else{\n                            d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {meta[d.id] = d});\n                        }\n\n\n\n                        add_tree_helpers(this.container_object, s, format, {'meta': meta, 'parameters': parameters})\n                        return\n\n\n\n                    });\n                    reader.readAsText(mapping_file);\n\n\n                }\n                else {\n                    add_tree_helpers(this.container_object, s, format)\n                    return}\n\n\n\n\n            }\n\n            var file = document.getElementById('add_tree_file_input' + this.container_object.uid).files[0];\n\n            if (file) {\n                var reader = new FileReader();\n                reader.readAsText(file, \"UTF-8\");\n                reader.onload =  (evt) => {\n\n                    if (mapping_file) {\n                        var parameters = that.get_mapping_parameter_from_UI(true)\n\n                        const reader = new FileReader();\n\n                        reader.addEventListener('load', (event) => {\n\n                            var meta = []\n\n\n                            if (mapping_file.name.split('.').pop() == 'tsv'){\n                                d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {meta[d.id] = d});\n                            }\n                            else{\n                                d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {meta[d.id] = d});\n                            }\n\n                            add_tree_helpers(this.container_object, evt.target.result, format, {'meta': meta, 'parameters': parameters})\n                            return\n\n\n\n                        });\n                        reader.readAsText(mapping_file);\n\n\n                    }\n                    else {\n                        add_tree_helpers(this.container_object, evt.target.result, format)\n                        return}\n\n\n                }\n                reader.onerror = function (evt) {\n                    console.log(\"error reading file\")\n                }\n            }\n\n\n\n        }\n\n        document.getElementById('modal_add_tree_final_button' + this.container_object.uid).onclick = () => {\n\n\n            var e = document.getElementById('add_tree_str_select' + this.container_object.uid);\n\n            add_data_from_modal(e.value)\n        }\n\n        modmod.getElementsByClassName('t1')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\"+ this.container_object.uid).value = this.examples.small1\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('t1')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\"+ this.container_object.uid).value = this.examples.small1\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('t2')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\"+ this.container_object.uid).value = this.examples.small2\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('tbig')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\"+ this.container_object.uid).value = this.examples.big\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('nhx_ex')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\"+ this.container_object.uid).value = this.examples.nhx\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'nhx'\n        };\n\n\n        // META DATA UPLOADER\n        document.getElementById('upload_mapping_validation'+ this.container_object.uid).style.display = 'none'\n        document.getElementById('upload_mapping_close'+ this.container_object.uid).style.display = 'none'\n\n\n\n        var x = modmod.getElementsByClassName('card')\n        for (var i = 0; i < x.length; i++) {\n            x[i].style.border = 'none';\n        }\n\n        // Add JS for modal corpus\n        var that = this\n\n        document.getElementById('tree_adder_modal_add_mapping_file_input' + this.container_object.uid).onchange = function() {\n            let input = this.files[0];\n\n            if (input) {\n\n                document.getElementById('tree_adder_mod_meta_card2_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('tree_adder_mod_meta_card3_' + that.container_object.uid).style.display = 'block'\n\n                var reader = new FileReader();\n                var data;\n\n                reader.addEventListener(\"load\", parseFile, false);\n                reader.readAsText(input);\n                function parseFile(){\n\n                    // load data\n                    if (input.name.split('.').pop() == 'tsv'){\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(reader.result, function(d){\n                            return d;\n                        });\n                    }\n                    else{\n\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(reader.result, function(d){\n                            return d;\n                        });\n\n                    }\n\n\n                    // Get columns + types\n                    var numerisator = {}\n                    data['columns'].forEach((currentElement) => { if (currentElement != 'id'){  numerisator[currentElement] = 'num'}})\n                    data.forEach((currentElement) => {\n                        for (var key of Object.keys(numerisator)) {\n                            if (isNaN(currentElement[key])){\n                                numerisator[key] = 'cat'\n                            }\n                        }\n                    })\n\n                    // creates radios\n                    var radio_container = document.getElementById( 'tree_adder_mod_meta_card2_radio' + that.container_object.uid)\n                    var get_el = function(){return `\n                        \n                            <div  style = \"padding: 12px 24px 0;\">  <span><b style = \"margin-right: 12px\" > Column:  </b> \"NAME_\"</span>  <br>\n\n                    <div class=\"form-check \" style=\"margin-left: 24px\" >\n                        <input class=\"form-check-input \" name=\"flexRadioDefault\"   type=\"radio\" value=\"num\" id=\"RADIO_1\" ATTR_NUM>\n                            <label class=\"form-check-label\" for=\"RADIO_1\">\n                                Numerical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check \" style=\"margin-left: 24px\"  >\n                        <input class=\"form-check-input\"   name=\"flexRadioDefault\" type=\"radio\" value=\"cat\" id=\"RADIO_2\" ATTR_CAT>\n                            <label class=\"form-check-label\" for=\"RADIO_2\">\n                                Categorical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check\" style=\"margin-left: 24px\">\n                        <input class=\"form-check-input\"  name=\"flexRadioDefault\" type=\"radio\" value=\"color\" id=\"RADIO_3\">\n                            <label class=\"form-check-label\" for=\"RADIO_3\">\n                                Color\n                            </label>\n                    </div>\n   \n                    \n                   \n                    \n                    \n              \n                    \n                </div>\n                        `}\n\n                    for (var key of Object.keys(numerisator)){\n\n                        var rad = get_el()\n\n\n                        rad = rad.replace('NAME_', key)\n                        rad = rad.replaceAll('flexRadioDefault', 'tree_adder_flexRadioDefault_' + key +  that.container_object.uid )\n                        rad = rad.replace('RADIO_1',  that.container_object.uid + 'mapping_header_radiotree_adder_1' +  '__' + key )\n                        rad = rad.replace('RADIO_2',  that.container_object.uid + 'mapping_header_radiotree_adder_2'  + '__' + key )\n                        rad = rad.replace('RADIO_3',  that.container_object.uid + 'mapping_header_radiotree_adder_3'  + '__' + key )\n\n\n\n                        if (numerisator[key] == 'num'){\n                            rad = rad.replace('ATTR_NUM', 'checked')\n                            rad = rad.replace('ATTR_CAT', '')\n                        }\n                        else{\n                            rad = rad.replace('ATTR_NUM', 'disabled')\n                            rad = rad.replace('ATTR_CAT', 'checked')\n                        }\n\n\n\n                        radio_container.insertAdjacentHTML('beforeend',rad)\n\n                    }\n                    radio_container.insertAdjacentHTML('beforeend','<br>')\n\n                }\n\n            }\n\n        };\n\n\n\n    }\n\n    get_modal_template(){\n        return  `\n            <div class=\"modal\" id=\"exampleModal\" tabindex=\"-1\">\n                <div class=\"modal-dialog modal-dialog-centered modal-lg\">\n                    <div class=\"modal-content\">\n                    \n                    <div class=\"modal-header\" style=\"height: 128px;border:none !important\">\n                    <h3 class=\"modal-title\" id=\"exampleModalLabel\" style=\"margin: auto; text-align: center\">\n                    <b>TITLE_</b> <br>\n                    \n                    <small style=\"color:grey\">\n                    SUB_TITLE_\n            </small>\n                    </h3>\n                    \n                  </div>\n            \n                        <div class=\"modal-body\" style=\"background-color: #f8f9fa; padding: 24px 48px;\">\n            \n            \n                            TEMPLATE_CORPUS\n                          \n                            </div>\n                            \n                            \n                        </div>\n\n                    </div>\n                </div>\n            </div>\n`\n    }\n\n    // TOGGLE\n    add_toggle(){\n        var sub_div =  this.top_left.append(\"div\")\n            .style( \"display\", \"flex\")\n            .style('margin', '2px')\n\n\n        var butty_putty = sub_div.append('button')\n            .on('click', d => {return this.container_object.shift_model(-1)})\n            .attr('class', ' square_button')\n            .attr('id', 'buttontoggleleft_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Load previous tree')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-chevron-left ')\n\n        butty_putty.append('p')\n            .text('Previous')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_shiftleft = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttontoggleleft_' + this.container_object.div_id))\n\n\n\n        var stoggle = sub_div.append('div')\n            .attr('class', ' square_button screen_toggle')\n            .style('min-width', '92px')\n            .style('display', 'flex')\n            .style('align-items', 'center')\n\n\n        var sd = stoggle.append('div')\n\n\n\n\n        sd.append(\"div\")\n            .style('cursor', 'text')\n            .attr('id', 'input_edit_name'+ this.container_object.uid)\n            .attr(\"contenteditable\",\"true\")\n            .attr(\"class\",\"label\")\n            .style('display', 'inline')\n            .text(this.viewer.model.settings.name)\n\n\n\n        var ol = sd.append(\"ul\").attr('class', \"progress-indicator\" )\n            .style('width', 'auto')\n            .style('min-width', \"50px\")\n\n        for (var i = 0; i < this.container_object.models.length; i++) {\n\n            let li = ol.append('li')\n\n            if (i == this.container_object.current_model){\n\n                li.attr('class','completed' )\n\n            }\n\n                li.append('span')\n                .attr('class','bubble' )\n\n        }\n\n\n        sub_div.append('button')\n            .attr('class', 'square_button')\n            .attr('id', 'button_edit_name_check'+ this.container_object.uid)\n            .append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#fff')\n            .attr('class', ' fas fa-check ')\n\n        sub_div.append('button')\n            .attr('class', 'square_button button_edit_name')\n            .attr('id', 'button_edit_name_trash'+ this.container_object.uid)\n            .append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#fff')\n            .attr('class', ' fas fa-trash ')\n\n\n        var butty_putty = sub_div.append('button')\n            .attr('class', ' square_button')\n            .on('click', d => { return this.container_object.shift_model(1)})\n            .attr('id', 'buttonshiftright_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Load next tree')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-chevron-right ')\n\n        butty_putty.append('p')\n            .text('Next')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_shiftright = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonshiftright_' + this.container_object.div_id))\n\n\n\n        // bind events and action to editable div\n\n        var edit_name = document.querySelector('#input_edit_name'+ this.container_object.uid);\n        var edit_name_ok = document.querySelector('#button_edit_name_check'+ this.container_object.uid);\n        var edit_name_trash = document.querySelector('#button_edit_name_trash'+ this.container_object.uid);\n\n        edit_name.addEventListener(\"keypress\",  (e) => {\n            if (e.which == 13) {\n                event.preventDefault();\n                edit_name_ok.style.display = 'none';\n                edit_name_trash.style.display = 'none';\n                var old_name = this.viewer.model.get_name()\n                this.container_object.add_action('Rename tree',  this.viewer.model, this.viewer.model.set_name, [old_name], true )\n                this.viewer.model.set_name(edit_name.textContent)\n                return false;\n            }\n\n\n            //You can add delete key event code as well over here for windows users.\n            if(edit_name.textContent.length === 20 && e.keyCode != 8) {\n                e.preventDefault();\n            }\n        });\n\n        edit_name.addEventListener('focus', (event) => {\n            edit_name_ok.style.display = 'inline';\n            edit_name_trash.style.display = 'inline';\n        });\n\n        edit_name.addEventListener('blur', (event) => {\n            setTimeout(() =>  {\n                edit_name_ok.style.display = 'none';\n                edit_name_trash.style.display = 'none';\n                edit_name.textContent = this.viewer.model.get_name()\n            }, 300);\n\n        });\n\n\n        edit_name_trash.addEventListener('click', (event) => {\n            this.container_object.remove_current_tree(true)\n\n        });\n\n        edit_name_ok.addEventListener('click', (event) => {\n            var old_name = this.viewer.model.get_name()\n            this.container_object.add_action('Rename tree',  this.viewer.model, this.viewer.model.set_name, [old_name], true )\n            this.viewer.model.set_name(edit_name.textContent)\n\n        });\n\n\n\n\n    }\n\n    add_rescale_zoom(){\n\n        var butty_putty =   this.bottom_right.append('button')\n            .on('click', d => {\n\n                this.viewer.force_zoom_rescaling = true;\n                this.viewer.zoomed( {'transform':this.viewer.d3.zoomTransform(this.viewer.svg.node())});\n                this.viewer.force_zoom_rescaling = false;\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'buttonscaleviewer_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Optimise text size')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-text-height ')\n\n        butty_putty.append('p')\n            .text('Optimise text')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonscaleviewer_' + this.container_object.div_id))\n\n    }\n\n    add_fit_height() {\n\n        var butty_putty = this.bottom_right.append('button')\n            .on('click', d => {\n                this.viewer.fit_to_viewer_height()\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'buttonfitviewer_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Optimise view (possible collapse/expand)')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-compress ')\n\n        butty_putty.append('p')\n            .text('Optimise view')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonfitviewer_' + this.container_object.div_id))\n\n    }\n\n    add_maximise() {\n\n        var butty_putty=  this.bottom_right.append('button')\n            .on('click', d => {\n                this.viewer.maximise_zoom()\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'button_maximise_zoom_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Fit tree into viewer (no collapse/expand)')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-expand ')\n\n        butty_putty.append('p')\n            .text('Fit screen')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_maximise_zoom_' + this.container_object.div_id))\n\n    }\n\n    // BADGE ROOTING\n    add_root_badge() {\n\n\n\n        this.bottom_left.append('button')\n            .attr('class', ' square_button')\n            .style('padding', '4px')\n            .style('margin', '2px')\n            .style('cursor', 'default')\n            .style('color', 'white')\n            .style('background', 'rgb(136, 136, 136)')\n            .append(\"div\")\n            .on('click', d => { return this.container_object.toggle_rooting()})\n            .attr(\"class\", \"label\")\n            .append('small')\n            .html(this.viewer.model.rooted ? 'Rooted Tree <i class=\\\"fas fa-sync-alt\\\"></i>' : 'Unrooted Tree <i class=\\\"fas fa-sync-alt\\\"></i> ')\n    }\n\n    // ZOOM\n    add_zoom(){\n\n        var butty_putty =this.bottom_right.append('button')\n            .on('click', d => {return this.viewer.zoom_in()})\n            .attr('class', ' square_button')\n            .attr('id', 'buttonzoomplus_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Zoom in')\n            .style('margin', '2px')\n\n\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-search-plus ')\n\n        butty_putty.append('p')\n            .text('Zoom in')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_zoomplus = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonzoomplus_' + this.container_object.div_id))\n\n\n        var butty_putty =  this.bottom_right.append('button')\n            .on('click', d => {return this.viewer.zoom_out()})\n            .attr('class', ' square_button')\n            .style('margin', '2px')\n            .attr('id', 'buttonzoomminus_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Zoom out')\n\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-search-minus ')\n\n        butty_putty.append('p')\n            .text('Zoom out')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_zoomminus = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonzoomminus_' + this.container_object.div_id))\n\n    }\n\n    // SCALE\n    add_scale(){\n\n        var scaleLineLateralPadding = 10\n        var scaleLineBottomPadding = 10\n\n\n        var gg = this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'scale')\n            .attr(\"transform\", \"translate(0,\" + (this.viewer.height - scaleLineBottomPadding)  + \")\")\n\n        gg.append(\"path\")\n            .attr(\"d\", (d) => {return \"M\" + scaleLineLateralPadding + \",20L\" + (this.scale_pixel_length)  + \",20\"})\n            .attr(\"class\", 'scale_line')\n\n\n        var scale_text = gg.append(\"text\")\n            .attr(\"class\", 'scale_text')\n            .attr(\"x\", this.scale_pixel_length/2)\n            .attr(\"y\", 10)\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'middle')\n            .attr(\"dy\", \".2em\")\n            .text(d => {return this.compute_scale()})\n\n\n        return scale_text\n\n\n\n    }\n    remove_scale(){this.container_d3.select(\".scale\").remove()}\n\n    update_scale_value(zoom_scale){\n        this.scale_text.text(this.compute_scale(zoom_scale))\n\n    }\n\n    compute_scale(zoom_scale){\n        var zoom_scale = zoom_scale || 1;\n        return (this.viewer.scale_branch_length.invert(this.scale_pixel_length)/zoom_scale).toFixed(4);\n    }\n\n    //COLORING\n    add_color_legend(type){\n\n        this.container_d3.select(\".colorlegend_\" + type).remove()\n\n        var tt =this.viewer.model.settings.extended_data_type[this.viewer.model.settings.style.color_accessor[type]]\n\n        if ( tt === 'cat' || tt === 'color'){return}\n\n\n        var type = (typeof type !== 'undefined') ? type : 'node';\n\n        let top_padding = 16;\n        let left_padding = 16;\n        let width = 16;\n        let height = 100;\n        let gutter = 8;\n        let rect_height = height/100;\n\n        var offset = type == 'node' ? (this.viewer.height/2) + 30 : this.viewer.height/2-height - 10\n\n        let gg = this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'colorlegend_' + type)\n\n\n        var values = []\n\n        for (let i = 0; i < 100; i++) {\n            let n = this.viewer.intercolor[type]((i/100).toFixed(2));\n            values.push(this.viewer.colorScale[type](n));\n        }\n\n            gg.selectAll(\"rect\")\n            .data(values)\n            .join(\"rect\")\n            .attr(\"x\", left_padding)\n            .attr(\"y\", (d, i) => offset + i)\n            .attr(\"width\", width)\n                .attr(\"height\", rect_height)\n            .attr(\"fill\", d => d);\n\n        gg.append(\"text\")\n            .attr(\"x\", left_padding + width + gutter )\n            .attr(\"y\", offset - 6 )\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'start')\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n\n                if (ms.color_accessor[type]){\n                    var n = ms.color_extent_max[type][ms.color_accessor[type]];\n                    return Number.isInteger(n) ? n : parseFloat(n).toFixed(3);\n\n                }\n                return 1\n                })\n\n        gg.append(\"text\")\n            .attr(\"x\", left_padding + width + gutter )\n            .attr(\"y\", offset + height + 10 )\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'start')\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n\n                if (ms.color_accessor[type]){\n\n                    var n;\n\n                    if (ms.color_extent_max[type][ms.color_accessor[type]] == ms.color_extent_min[type][ms.color_accessor[type]]){\n                        n = ms.color_extent_min[type][ms.color_accessor[type]]-1;\n                    }else{\n                        n = ms.color_extent_min[type][ms.color_accessor[type]];\n                    }\n\n\n                    return Number.isInteger(n) ? n : parseFloat(n).toFixed(3);\n\n                }\n                return 0\n            })\n\n\n        var xx =  gutter\n        var yy =  offset + height/2\n\n        gg.append(\"text\")\n            .attr(\"fill\", \"#555\")\n            .attr('transform', \"translate(\"+xx+\", \" +yy+ \")rotate(-90)\")\n            .attr('text-anchor', 'middle')\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n                return ms.color_accessor[type] ? ms.color_accessor[type] : \"Topology\"\n\n\n            })\n\n    }\n    remove_color_legend(type){this.container_d3.select(\".colorlegend_\" + type).remove()}\n\n    // SEARCH\n\n    autocomplete(inp, arr) {\n\n        var that = this\n\n\n        /*the autocomplete function takes two arguments,\n        the text field element and an array of possible autocompleted values:*/\n        var currentFocus;\n        /*execute a function when someone writes in the text field:*/\n\n        inp.addEventListener(\"input\", function(e) {\n\n\n\n            var a, b, i, val = this.value;\n            /*close any already open lists of autocompleted values*/\n            closeAllLists();\n            if (!val) { return false;}\n            currentFocus = -1;\n            /*create a DIV element that will contain the items (values):*/\n            a = document.createElement(\"DIV\");\n            a.setAttribute(\"id\", this.id + \"autocomplete-list\");\n            a.setAttribute(\"class\", \"autocomplete-items\");\n            /*append the DIV element as a child of the autocomplete container:*/\n            this.parentNode.appendChild(a);\n            /*for each item in the array...*/\n            for (i = 0; i < arr.length; i++) {\n                /*check if the item starts with the same letters as the text field value:*/\n                if (arr[i].toUpperCase().includes(val.toUpperCase()) ){\n                //if (arr[i].substr(0, val.length).toUpperCase() === val.toUpperCase()) {\n                    /*create a DIV element for each matching element:*/\n                    b = document.createElement(\"DIV\");\n                    /*make the matching letters bold:*/\n                    var start_index = arr[i].toUpperCase().indexOf(val.toUpperCase())\n                    b.innerHTML += arr[i].substr(0, start_index);\n                    b.innerHTML += \"<strong>\" + arr[i].substr(start_index,  val.length) + \"</strong>\";\n                    b.innerHTML += arr[i].substr(start_index + val.length);\n                    /*insert a input field that will hold the current array item's value:*/\n                    b.innerHTML += \"<input type='hidden' value='\" + arr[i] + \"'>\";\n                    /*execute a function when someone clicks on the item value (DIV element):*/\n                    b.addEventListener(\"click\", function(e) {\n                        /*insert the value for the autocomplete text field:*/\n                        that.dismiss_blur = true\n                        inp.value = this.getElementsByTagName(\"input\")[0].value;\n                        document.getElementById('buttonsearch_' + this.container_object.div_id ).focus();\n\n                        that.container_object.zoom_to_node(inp.value)\n                        that.viewer.maximise_zoom()\n\n                        /*close the list of autocompleted values,\n                        (or any other open lists of autocompleted values:*/\n                        closeAllLists();\n                    });\n                    a.appendChild(b);\n                }\n            }\n        });\n        /*execute a function presses a key on the keyboard:*/\n        inp.addEventListener(\"keydown\", function(e) {\n            var x = document.getElementById(this.id + \"autocomplete-list\");\n            if (x) x = x.getElementsByTagName(\"div\");\n            if (e.keyCode == 40) {\n                /*If the arrow DOWN key is pressed,\n                increase the currentFocus variable:*/\n                currentFocus++;\n                /*and and make the current item more visible:*/\n                addActive(x);\n            } else if (e.keyCode == 38) { //up\n                /*If the arrow UP key is pressed,\n                decrease the currentFocus variable:*/\n                currentFocus--;\n                /*and and make the current item more visible:*/\n                addActive(x);\n            } else if (e.keyCode == 13) {\n                /*If the ENTER key is pressed, prevent the form from being submitted,*/\n                e.preventDefault();\n                if (currentFocus > -1) {\n                    /*and simulate a click on the \"active\" item:*/\n                    if (x) x[currentFocus].click();\n                }\n            }\n        });\n        function addActive(x) {\n            /*a function to classify an item as \"active\":*/\n            if (!x) return false;\n            /*start by removing the \"active\" class on all items:*/\n            removeActive(x);\n            if (currentFocus >= x.length) currentFocus = 0;\n            if (currentFocus < 0) currentFocus = (x.length - 1);\n            /*add class \"autocomplete-active\":*/\n            x[currentFocus].classList.add(\"autocomplete-active\");\n        }\n        function removeActive(x) {\n            /*a function to remove the \"active\" class from all autocomplete items:*/\n            for (var i = 0; i < x.length; i++) {\n                x[i].classList.remove(\"autocomplete-active\");\n            }\n        }\n        function closeAllLists(elmnt) {\n            /*close all autocomplete lists in the document,\n            except the one passed as an argument:*/\n            var x = document.getElementsByClassName(\"autocomplete-items\");\n            for (var i = 0; i < x.length; i++) {\n                if (elmnt != x[i] && elmnt != inp) {\n                    x[i].parentNode.removeChild(x[i]);\n                }\n            }\n        }\n        /*execute a function when someone clicks in the document:*/\n        document.addEventListener(\"click\", function (e) {\n            closeAllLists(e.target);\n        });\n\n\n    }\n\n    add_search(){\n\n\n        this.container_d3.selectAll(\"#searchinp\" + this.viewer.uid).remove()\n\n        // add input\n        this.search_input =  this.tr_buttons.append('input')\n            .attr('class', '  search_input')\n            .style('display', 'none')\n            .style('height', '56px')\n            .attr('id', \"searchinp\" + this.viewer.uid )\n\n        var input_el = document.getElementById(\"searchinp\" + this.viewer.uid );\n\n        // add search button\n        var search_but = this.tr_buttons.append('button')\n            .attr('class', ' square_button search_button')\n            .attr('id', 'buttonsearch_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'search for label')\n            .style('border-top-left-radius', '8px')\n            .style('border-bottom-left-radius', '8px')\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                var display = input_el.style.display;\n\n                if (display == 'none'){\n                    let search_el = document.getElementById('buttonsearch_' + this.container_object.div_id );\n\n                    input_el.style.display = 'inline-block';\n                    search_el.style.borderTopLeftRadius =  '0px';\n                    search_el.style.borderBottomLeftRadius = '0px';\n                }\n                else{\n                    this.container_object.zoom_to_node(document.getElementById(\"searchinp\" + this.viewer.uid).value)\n                    this.viewer.maximise_zoom()\n\n                    input_el.style.display = 'none';\n                    search_el.style.borderTopLeftRadius =  '8px';\n                    search_el.style.borderBottomLeftRadius = '8px';\n                    document.getElementById('searchinp' + this.viewer.uid + 'autocomplete-list').remove();\n                }\n            })\n\n\n        search_but.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-search ')\n\n        search_but.append('p')\n            .text('Search')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_search = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonsearch_' + this.container_object.div_id))\n\n\n\n        let search_el = document.getElementById('buttonsearch_' + this.container_object.div_id );\n\n        this.autocomplete(document.getElementById(\"searchinp\" + this.viewer.uid ), this.viewer.model.settings.suggestions)\n\n        input_el.addEventListener(\"keyup\", ({key}) => {\n            if (key === \"Enter\") {\n                this.container_object.zoom_to_node(document.getElementById(\"searchinp\" + this.viewer.uid).value)\n                this.viewer.maximise_zoom()\n            }\n        })\n\n        input_el.addEventListener(\"blur\", (e) => {\n\n            setTimeout(() => {\n\n                if (this.dismiss_blur){\n                    this.dismiss_blur = false\n\n                }\n                else{\n                    input_el.style.display = 'none';\n                    search_el.style.borderTopLeftRadius =  '8px';\n                    search_el.style.borderBottomLeftRadius = '8px';\n                    document.getElementById('searchinp' + this.viewer.uid + 'autocomplete-list').remove();\n\n                }\n            }, 200);\n\n        })\n\n\n    }\n\n    // META\n    get_modal_meta_corpus(){\n        return `\n\n        <div class=\"container-fluid\">\n                                \n                <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 1: Select your mapping file</b> </h5>\n                  \n\n                 <div class=\"input-group mb-3\" style=\"padding: 24px 24px 0;\">\n                                <input class=\"form-control\" type=\"file\" id=\"add_meta_file_input\" > \n                           </div>\n                           \n                            <p style=\"padding: 0 24px;\"><small>\n                            <b>Accepted format:</b> '.csv' or '.tsv' and must contain column names at first row. \n                            The mapping is done using the column named 'id' to identify leaves and nodes.\n</small></p>\n\n                        </div>\n                        \n                </div>\n\n                <br>\n                \n                <div class=\"card\" id=\"mod_meta_card2\" style=\"display: none\">\n                \n                  <div class=\"card-body\" id=\"mod_meta_card2_radio\" >\n                  \n                  <h5> <b>Step 2: Configure data mapping types</b> </h5>\n                  \n                  \n                         \n                       </div>\n                        \n                </div>\n                \n                <br>\n                \n                <div class=\"card\" id=\"mod_meta_card3\" style=\"display: none\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 3: Choose a target for additional data</b> </h5>\n                  \n                                       <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                  <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"mapping_check_leaf\" checked>\n                  <label class=\"form-check-label\" for=\"flexCheckDefault\">\n                    Apply to leaves\n                  </label>\n                </div>\n                <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                  <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"mapping_check_nodes\">\n                  <label class=\"form-check-label\" for=\"flexCheckChecked\">\n                    Apply to Nodes\n                  </label>\n                </div>\n                 \n\n                        </div>\n                        \n                </div>\n                \n                <br>\n                \n                <div style=\"margin: auto; width: fit-content;\">\n                \n                  <button type=\"button\"  id=\"upload_mapping_close\"  class=\"btn  btn-danger\" data-bs-dismiss=\"modal\">Cancel</button>\n                  <button type=\"button\" id=\"upload_mapping_validation\" class=\"btn  btn-success\"  data-bs-dismiss=\"modal\" disabled >Upload mapping file</button>\n</div>\n                \n                 \n              \n               </div>\n  \n        `\n    }\n\n    add_meta(){\n\n        let mod_html = this.get_modal_template()\n\n\n        mod_html = mod_html.replace('TEMPLATE_CORPUS', this.get_modal_meta_corpus())\n        mod_html = mod_html.replace('TITLE_', 'Upload your own mapping file')\n        mod_html = mod_html.replace('SUB_TITLE_', 'to add additional information to leaves and nodes')\n\n        mod_html = mod_html.replace('exampleModal', 'modal_meta_' + this.container_object.uid)\n        mod_html = mod_html.replaceAll('add_meta_file_input', 'modal_add_mapping_file_input' + this.container_object.uid)\n\n        mod_html = mod_html.replace('mod_meta_card2', 'mod_meta_card2_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card3', 'mod_meta_card3_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2_radio', 'mod_meta_card2_radio' + this.container_object.uid)\n\n        mod_html = mod_html.replace('flexCheckChecked', 'flexCheckChecked' + this.container_object.uid)\n        mod_html = mod_html.replace('flexCheckDefault', 'flexCheckDefault' + this.container_object.uid)\n\n        mod_html = mod_html.replace('upload_mapping_validation', 'upload_mapping_validation' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_nodes', 'mapping_check_nodes' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_leaf', 'mapping_check_leaf' + this.container_object.uid)\n\n        document.getElementById(this.container_object.div_id).insertAdjacentHTML('afterend',mod_html)\n\n        // Add JS for modal corpus\n        var that = this\n\n        document.getElementById('modal_add_mapping_file_input' + this.container_object.uid).onchange = function() {\n            let input = this.files[0];\n\n            if (input) {\n\n                document.getElementById('mod_meta_card2_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('mod_meta_card3_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('upload_mapping_validation' + that.container_object.uid).disabled = false;\n\n\n                var reader = new FileReader();\n                var data;\n\n                reader.addEventListener(\"load\", parseFile, false);\n                reader.readAsText(input);\n                function parseFile(){\n\n                    // load data\n                    if (input.name.split('.').pop() == 'tsv'){\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(reader.result, function(d){\n                            return d;\n                        });\n                    }\n                    else{\n\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(reader.result, function(d){\n                            return d;\n                        });\n\n                    }\n\n\n                    // Get columns + types\n                    var numerisator = {}\n                    data['columns'].forEach((currentElement) => { if (currentElement != 'id'){  numerisator[currentElement] = 'num'}})\n                    data.forEach((currentElement) => {\n                        for (var key of Object.keys(numerisator)) {\n                            if (isNaN(currentElement[key])){\n                                numerisator[key] = 'cat'\n                            }\n                        }\n                    })\n\n                    // creates radios\n                    var radio_container = document.getElementById( 'mod_meta_card2_radio' + that.container_object.uid)\n                    var get_el = function(){return `\n                        \n                            <div  style = \"padding: 12px 24px 0;\">  <span><b style = \"margin-right: 12px\" > Column:  </b> \"NAME_\"</span>  <br>\n\n                    <div class=\"form-check \" style=\"margin-left: 24px\" >\n                        <input class=\"form-check-input \" name=\"flexRadioDefault\"   type=\"radio\" value=\"num\" id=\"RADIO_1\" ATTR_NUM>\n                            <label class=\"form-check-label\" for=\"RADIO_1\">\n                                Numerical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check \" style=\"margin-left: 24px\"  >\n                        <input class=\"form-check-input\"   name=\"flexRadioDefault\" type=\"radio\" value=\"cat\" id=\"RADIO_2\" ATTR_CAT>\n                            <label class=\"form-check-label\" for=\"RADIO_2\">\n                                Categorical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check\" style=\"margin-left: 24px\">\n                        <input class=\"form-check-input\"  name=\"flexRadioDefault\" type=\"radio\" value=\"color\" id=\"RADIO_3\">\n                            <label class=\"form-check-label\" for=\"RADIO_3\">\n                                Color\n                            </label>\n                    </div>\n   \n                    \n                   \n                    \n                    \n                    \n                    \n                </div>\n                        `}\n\n                    for (var key of Object.keys(numerisator)){\n\n                        var rad = get_el()\n\n\n                        rad = rad.replace('NAME_', key)\n                        rad = rad.replaceAll('flexRadioDefault', 'flexRadioDefault_' + key +  that.container_object.uid )\n                        rad = rad.replace('RADIO_1',  that.container_object.uid + 'mapping_header_radio1' +  '__' + key )\n                        rad = rad.replace('RADIO_2',  that.container_object.uid + 'mapping_header_radio2'  + '__' + key )\n                        rad = rad.replace('RADIO_3',  that.container_object.uid + 'mapping_header_radio3'  + '__' + key )\n\n\n\n                        if (numerisator[key] == 'num'){\n                            rad = rad.replace('ATTR_NUM', 'checked')\n                            rad = rad.replace('ATTR_CAT', '')\n                        }\n                        else{\n                            rad = rad.replace('ATTR_NUM', 'disabled')\n                            rad = rad.replace('ATTR_CAT', 'checked')\n                        }\n\n\n\n                        radio_container.insertAdjacentHTML('beforeend',rad)\n\n                    }\n                    radio_container.insertAdjacentHTML('beforeend','<br>')\n\n                }\n\n            }\n\n            else {\n                document.getElementById('upload_mapping_validation' + that.container_object.uid).disabled = true;\n            }\n        };\n\n        document.getElementById('upload_mapping_validation' + this.container_object.uid).onclick = function(){\n\n\n            var file = document.getElementById('modal_add_mapping_file_input' + that.container_object.uid).files[0];\n\n            if (file) {\n\n                var parameters = that.get_mapping_parameter_from_UI()\n\n                console.log(parameters)\n                const reader = new FileReader();\n\n                reader.addEventListener('load', (event) => {\n\n                    var meta = []\n\n                    if (file.name.split('.').pop() == 'tsv'){\n                        d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {meta[d.id] = d});\n                    }\n                    else{\n                        d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {meta[d.id] = d});\n                    }\n\n                    that.viewer.model.settings.use_meta_for_leaf = parameters.use_meta_for_leaf\n                    that.viewer.model.settings.use_meta_for_node = parameters.use_meta_for_node\n\n\n\n                    if (that.viewer.model.settings.use_meta_for_leaf){\n                        that.viewer.model.add_meta_leaves(meta, parameters.headers, that.container_object.api)\n                    }\n\n                    if (that.viewer.model.settings.use_meta_for_node){\n                        that.viewer.model.add_meta_nodes(meta, parameters.headers, that.container_object.api)\n                    }\n\n\n\n                    that.viewer.interface = new Interface(that.viewer, that.viewer.container_object)\n\n                });\n                reader.readAsText(file);\n\n            }\n\n\n\n\n        }\n\n\n        // add the button\n        var ex_b = this.tr_buttons.append('button')\n            .attr('id', 'button_meta' + this.container_object.uid)\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Add additional informations to the tree')\n            .attr('data-bs-toggle', 'modal')\n            .attr('data-bs-target', '#modal_meta_' + this.container_object.uid )\n\n        var divybuty = ex_b.attr('class', ' square_button')\n            .style('margin', '2px')\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'fas fa-file-lines')\n\n        divybuty.append('p')\n            .text('Mapping')\n            .style('font-size', 'xx-small')\n\n\n    }\n\n    get_mapping_parameter_from_UI(modal){\n\n        var modal = (typeof modal == 'undefined') ? false : modal;\n\n        var p = {'headers':  {}}\n\n        if (modal){\n            var prefix = this.container_object.uid + 'mapping_header_radiotree_adder_'\n        }\n        else{\n            var prefix = this.container_object.uid + 'mapping_header_radio'\n        }\n\n\n        var checkies = document.querySelectorAll(`[id^=\"${prefix}\"]`);\n\n\n        checkies.forEach(element => {\n\n            if (element.checked) {\n                var column_type = element.value\n                var column_name = element.id.split('__').pop()\n\n\n                p['headers'][column_name] = column_type\n            }\n\n\n        });\n\n        if (modal){\n            p['use_meta_for_node'] = document.getElementById( 'tree_adder_mapping_check_nodes' + this.container_object.uid).checked\n            p['use_meta_for_leaf'] = document.getElementById( 'tree_adder_mapping_check_leaf' + this.container_object.uid).checked\n        }\n        else{\n            p['use_meta_for_node'] = document.getElementById( 'mapping_check_nodes' + this.container_object.uid).checked\n            p['use_meta_for_leaf'] = document.getElementById( 'mapping_check_leaf' + this.container_object.uid).checked\n        }\n\n\n\n\n\n        return p\n    }\n\n    // EXPORT\n    add_export() {\n\n        // add the button\n        var ex_b = this.tr_buttons.append('button')\n            .attr('id', 'button_export' + this.container_object.uid)\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Export this tree as graphic or text file')\n\n            var divybuty = ex_b.attr('class', ' square_button')\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                if (this.menu_export.style('display') === 'none'){\n                     this.menu_settings.style(\"display\", 'none') // make it more general to all menu/button\n                    ex_b.style('background-color', '#CCC');\n                     document.getElementById(\"button_settings\" + this.container_object.uid).style.backgroundColor =  'rgba(239, 239, 239, 0.95)';\n                    return this.menu_export.style(\"display\", 'block')\n                }\n                ex_b.style('background-color', 'rgba(239, 239, 239, 0.95)');\n                return this.menu_export.style(\"display\", 'none')\n            })\n\n\n\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-download ')\n\n        divybuty.append('p')\n            .text('Download')\n            .style('font-size', 'xx-small')\n\n\n        this.tooltip_export = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_export' + this.container_object.uid))\n\n\n\n        // add the sub menu container\n        this.menu_export = this.tr_menus.append('div')\n            .style(\"background-color\", '#aaa')\n            .attr('class', 'menu_export')\n\n\n        // ADD THE ACCORDION SYSTEM\n\n        this.menu_exportimage_b = this.menu_export.append('button').attr('class', 'accordion').text(\"Export as Graphic\")\n        this.menu_exportimage_p =  this.menu_export.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        this.export_as = this.menu_exportimage_p.append('div')\n            .style('display', 'flex')\n\n        this.export_as.append('button') // todo clean click\n            .attr('class', ' square_button')\n            .on(\"click\", d => {\n                this.screen_shot('png')\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"PNG\")\n\n\n        this.export_as.append('button')\n            .attr('class', ' square_button')\n            .on(\"click\", d => { // todo clean\n                this.screen_shot('svg')\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"SVG\")\n\n\n\n        this.menu_exportfile_b = this.menu_export.append('button').attr('class', 'accordion').text(\"Export as Text\")\n        this.menu_exportfile_p =  this.menu_export.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        this.export_as = this.menu_exportfile_p.append('div')\n            .style('display', 'flex')\n\n        this.export_as.append('button') // todo clean click\n            .attr('class', ' square_button')\n            .on(\"click\", d => {\n                this.container_object.export_as_newick()\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"Newick\")\n\n    }\n\n    screen_shot(format){\n\n        var svg = this.viewer.d3.select(\"#svg\" + this.viewer.uid)\n        this.addLogo(svg);\n        var name = svg.attr(\"id\");\n        var svgString = this.getSVGString(svg.node());\n\n        if(format === 'svg') {\n\n            var blob = new Blob([svgString], {\"type\": \"image/svg+xml;base64,\"+ btoa(svgString)});\n            file_saver__WEBPACK_IMPORTED_MODULE_0__.saveAs(blob, name+\".svg\");\n            svg.select(\"#exportLogo\").remove();\n\n        }\n        else if (format === 'png'){\n            var exportElement = svg.node();\n            var width = exportElement.getBoundingClientRect().width;\n            var height = exportElement.getBoundingClientRect().height;\n            this.svgString2Image(svgString, 2 * width, 2 * height, 'png', save);\n            svg.select(\"#exportLogo\").remove();\n\n            function save(dataBlob, filesize) {\n                var filename = (name) ? name+\".\" : \"\";\n                file_saver__WEBPACK_IMPORTED_MODULE_0__.saveAs(dataBlob, filename+'phylo.io.png'); // FileSaver.js function\n            }\n\n        }\n\n    }\n\n    // UNDO\n    add_undo(){\n        var divybuty = this.tr_buttons.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'buttonundo_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title',  d=> { return  this.container_object.history_actions.length > 0 ? 'Undo ' + this.container_object.get_last_action().name :  'Nothing to undo' })\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                this.api.undoing = true\n                var cta = this.container_object.pop_last_action();\n                if (cta) {\n                    cta.fonct.apply(cta.fonction_obj, cta.argu);\n\n                    if (cta.refresh_interface){\n                        let empty = this.container_object.models.length <= 0\n                        this.container_object.interface = new Interface(this.viewer, this.container_object, empty )\n                    }\n\n                }\n                this.api.undoing = false\n            })\n\n\n\n\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-undo ')\n\n        divybuty.append('p')\n            .text('Undo')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_undo = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonundo_' + this.container_object.div_id))\n\n    }\n\n    toggle_select_node_face(cid){\n\n        var acc = document.getElementById(\"accordion_branch\"+cid)\n\n\n        if (acc.classList.contains('active')) {\n\n            document.getElementById('selectlt' + cid).style.display = 'block';\n            document.getElementById('selectlb' + cid).style.display = 'block';\n            document.getElementById('selectr' + cid).style.display = 'block';\n\n            document.getElementById('selectlt' + cid).style.top = -90 + 'px';\n            document.getElementById('selectlb' + cid).style.top = -40 + 'px';\n            document.getElementById('selectr' + cid).style.top = -60 + 'px';\n\n            document.getElementById('selectlt' + cid).style.left = '30px';\n            document.getElementById('selectlb' + cid).style.left = '30px';\n            document.getElementById('selectr' + cid).style.left = '130px';\n\n        }\n        else{\n            document.getElementById('selectlt' + cid).style.display = 'none';\n            document.getElementById('selectlb' + cid).style.display = 'none';\n            document.getElementById('selectr' + cid).style.display = 'none';\n        }\n    }\n\n    // SETTINGS\n    add_settings() {\n\n        // add the buttons\n        var set_b = this.tr_buttons.append('button')\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Viewer settings')\n\n        set_b.attr('class', ' square_button')\n        set_b.attr('id', 'button_settings' + this.container_object.uid)\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                if (this.menu_settings.style('display') === 'none') { //make it as funtion\n                    this.menu_export.style(\"display\", 'none')\n                    set_b.style('background-color', '#CCC');\n                    document.getElementById(\"button_export\" + this.container_object.uid).style.backgroundColor = 'rgba(239, 239, 239, 0.95)';\n                    return this.menu_settings.style(\"display\", 'block')\n                }\n                set_b.style('background-color', 'rgba(239, 239, 239, 0.95)');\n                return this.menu_settings.style(\"display\", 'none')\n            })\n\n        set_b.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' fas fa-sliders-h ')\n\n        set_b.append('p')\n            .text('Settings')\n            .style('font-size', 'xx-small')\n\n\n\n        this.tooltip_settings = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_settings' + this.container_object.uid))\n\n\n        // add the menu\n        this.menu_settings = this.tr_menus.append('div')\n            .attr('class', 'menu_settings')\n\n\n        // ADD THE ACCORDION SYSTEM todo close other when open one\n\n        this.menu_general_b = this.menu_settings.append('button').attr('id', 'accordion_tree'+this.container_object.uid).attr('class', 'accordion').text(\"Tree\")\n        this.menu_general_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n        this.menu_tree_b = this.menu_settings.append('button').attr('id', 'accordion_branch'+this.container_object.uid).attr('class', 'accordion').text(\"Branch & Labels\")\n        this.menu_tree_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        this.menu_search_b = this.menu_settings.append('button').attr('id', 'accordion_branch'+this.container_object.uid).attr('class', 'accordion').text(\"Search\")\n        this.menu_search_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        //this.menu_metadata_b = this.menu_settings.append('button').attr('id', 'accordion_color'+this.container_object.uid).attr('class', 'accordion').text(\"Additional Information\")\n        //this.menu_metadata_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        this.menu_coloring_b = this.menu_settings.append('button').attr('id', 'accordion_color'+this.container_object.uid).attr('class', 'accordion').text(\"Coloring\")\n        this.menu_coloring_panel =  this.menu_settings.append('div').attr('class', 'panel')\n\n        this.menu_coloring_p = this.menu_coloring_panel.append(\"div\").style(\"padding\", \"14px\")\n\n        if (this.viewer.model.settings.has_histogram_data && this.viewer.model.settings.show_histogram ) {\n        this.menu_stack_b = this.menu_settings.append('button').attr('class', 'accordion').text(\"Bar Graph\")\n        this.menu_stack_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Bar height\", 40, 300, this.viewer.model.settings.stack.stackHeight, 5, \"slider_stack_height_\",\n                (e ) =>{this.viewer.update_stack_height(e.target.value)})\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Bar width\", 10, 150, this.viewer.model.settings.stack.stackWidth, 5, \"slider_stack_width_\",\n                (e ) =>{this.viewer.update_stack_width(e.target.value)})\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Label size\", 6, 40, this.viewer.model.settings.stack.legendTxtSize, 1, \"slider_stack_text_size_\",\n                (e ) =>{this.viewer.update_stack_font(e.target.value)})\n\n            this.menu_stack_p.append(\"p\").text('Labels').style('margin-bottom', \"0px\")\n\n\n            this.stack_type = this.menu_stack_p.append('div')\n                .style('display', 'flex')\n                .style('margin-bottom', \"14px\")\n\n\n\n            this.stack_type.append('button') // todo clean click\n                .attr('class', ' square_button')\n                .attr('id', 'stack_type_events')\n                .style('background-color', d => {return this.viewer.model.settings.stack.type === 'events' ? 'rgb(204, 204, 204)': null })\n                .on(\"click\", d => {\n                    this.viewer.update_stack_type('events')\n                    this.viewer. d3.select(\"#stack_type_events\").style('background-color','rgb(204, 204, 204)')\n                    this.viewer.d3.select(\"#stack_type_genes\").style('background-color', null)\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Events\")\n\n\n            this.stack_type.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'stack_type_genes')\n                .style('background-color', d => {return this.viewer.model.settings.stack.type === 'genes' ? 'rgb(204, 204, 204)': null })\n                .on(\"click\", d => {\n                    this.viewer.update_stack_type('genes')\n                    this.viewer.d3.select(\"#stack_type_genes\").style('background-color','rgb(204, 204, 204)')\n                    this.viewer.d3.select(\"#stack_type_events\").style('background-color', null)\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Genes\")\n\n            this.add_swicth_UI(this.menu_stack_p, (this.viewer.model.settings.stack.maxStackHeight === 'ratio'),\"Fix stack height\",   this.viewer.toggle_height_max_ratio.bind(this.viewer))\n\n            this.add_swicth_UI(this.menu_stack_p, this.viewer.model.settings.stack.showHistogramValues,\"Show numbers\",   this.viewer.toggle_show_stack_number.bind(this.viewer))\n\n            if (this.viewer.model.settings.stack.has_support){\n                this.add_swicth_UI(this.menu_stack_p, this.viewer.model.settings.stack.only_support,\"remove low coverage hogs\",   this.viewer.toggle_only_support.bind(this.viewer))\n\n            }\n\n\n\n\n        }\n\n        // ADD LOGIC TO ACCORDION todo add it general or to this div only\n        var acc = document.getElementById(this.container_object.div_id).getElementsByClassName(\"accordion\");\n        var that = this;\n        var i;\n\n        for (i = 0; i < acc.length; i++) {\n            acc[i].addEventListener(\"click\", function(e) {\n\n                this.classList.toggle(\"active\");\n\n                var panel = this.nextElementSibling;\n                if (panel.style.maxHeight) {\n                    panel.style.maxHeight = null;\n                } else {\n                    panel.style.maxHeight = panel.scrollHeight + \"px\";\n                }\n\n                that.toggle_select_node_face(that.container_object.uid)\n\n                /*\n\n                var checkExist = setInterval(function() {\n\n                    var obs_h = panel.style.maxHeight ? panel.getBoundingClientRect().height : 0\n                    var exp_h = panel.style.maxHeight ? panel.scrollHeight : 0\n\n                    if (obs_h == exp_h ) {\n                        that.toggle_select_node_face(that.container_object.uid)\n                        clearInterval(checkExist);\n                    }\n\n                    else {\n                        console.log(obs_h, exp_h )\n                    }\n                }, 200);\n\n                 */\n\n            });\n\n\n        }\n\n        // ADD TOGGLE BRANCH LENGTH\n        if(this.viewer.model.settings.has_branch_lenght){\n            this.add_swicth_UI(this.menu_general_p, this.viewer.model.settings.use_branch_lenght,\"Use branch length\",   this.viewer.toggle_use_length.bind(this.viewer))\n        }\n\n        this.add_swicth_UI(this.menu_general_p, this.viewer.model.settings.align_tip,\"Align leaves\",   this.viewer.toggle_align_tip.bind(this.viewer))\n\n        this.add_swicth_UI(this.menu_general_p, this.viewer.model.settings.mirror,\"Mirror tree\",   this.viewer.toggle_mirror.bind(this.viewer))\n\n        // ADD SLIDER RESIZE X/Y\n        /*\n        this.slider_v = this.add_slider_UI(this.menu_general_p, \"Tree height\", 2, 1000, this.viewer.model.settings.tree.node_vertical_size, 1, \"slider_node_vertical_size_\",\n            (e ) =>{this.viewer.modify_node_size('vertical', e.target.value - this.viewer.model.settings.tree.node_vertical_size)})\n\n        this.slider_h = this.add_slider_UI(this.menu_general_p, \"Tree width\", 2, 1000, this.viewer.model.settings.tree.node_horizontal_size, 1, \"slider_node_horyzontal_size_\",\n            (e ) =>{this.viewer.modify_node_size('horizontal', e.target.value - this.viewer.model.settings.tree.node_horizontal_size)})\n  */\n\n\n        this.buttons_height = this.add_quartet_buttons(this.menu_general_p, \"Tree height\", \"buton_vertical_size_\", this.container_object.modify_node_size_percent, 'vertical')\n        this.buttons_width = this.add_quartet_buttons(this.menu_general_p, \"Tree width\", \"buton_horyzontal_size_\", this.container_object.modify_node_size_percent, 'horizontal')\n\n\n        // ADD SELECT LEFT NODE LABEL\n        this.add_node_face_UI(this.menu_tree_p, this.container_object.uid)\n\n        // ADD TOGGLE INTERNAL LABEL\n        //this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_internal_label,\"Show internal label\",   this.viewer.toggle_internal_label.bind(this.viewer))\n\n\n        // ADD TOGGLE tooltips\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.subsample_label,\"Subsample Labels\",   this.viewer.toggle_subsample.bind(this.viewer))\n\n        // ADD TOGGLE LEAF LABEL\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_leaves,\"Show Leaves Labels\",   this.viewer.toggle_leaves.bind(this.viewer))\n\n        // ADD TOGGLE tooltips\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.show_tooltips,\"Show tooltips\",   this.viewer.toggle_tooltips.bind(this.viewer))\n\n        if (this.viewer.model.settings.has_duplications){\n            // ADD TOGGLE DUPLICATION\n            this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_duplication,\"Show duplications\",   this.viewer.toggle_duplication.bind(this.viewer))\n\n        }\n\n        // ADD SLIDER NODE/LINE/TEXT\n        /*\n        this.slider_n = this.add_slider_UI(this.menu_tree_p, \"Node Radius\", 1, this.viewer.model.settings.tree.node_vertical_size/2, this.viewer.model.settings.tree.node_radius, 1, \"slider_node_radius_\",\n            (e ) =>{this.viewer.update_node_radius(e.target.value)})\n\n        this.slider_l = this.add_slider_UI(this.menu_tree_p, \"Line width\", 1, this.viewer.model.settings.tree.node_vertical_size/2, this.viewer.model.settings.tree.line_width, 1, \"slider_line_width_\",\n            (e ) =>{this.viewer.update_line_width(e.target.value)})\n\n               this.slider_t = this.add_slider_UI(this.menu_tree_p, \"Leaf label size\", 4, 50, this.viewer.model.settings.tree.font_size, 1, \"slider_text_size_\",\n            (e ) =>{this.viewer.update_font_size(e.target.value)})\n\n        this.slider_i = this.add_slider_UI(this.menu_tree_p, \"Node label size\", 1, this.viewer.model.settings.tree.node_vertical_size*2, this.viewer.model.settings.style.font_size_internal, 1, \"slider_text_node_size_\",\n            (e ) =>{this.viewer.update_font_size_node(e.target.value)})\n\n         */\n\n        this.add_quartet_buttons(this.menu_tree_p, \"Node Radius\", \"buton_node_radius_\", this.container_object.update_node_radius_percent )\n        this.add_quartet_buttons(this.menu_tree_p, \"Line width\", \"buton_line_width_\", this.container_object.update_line_width_percent)\n        this.add_quartet_buttons(this.menu_tree_p, \"Leaf label size\", \"buton_leaf_label_size_\", this.container_object.update_font_size_leaf_percent)\n        this.add_quartet_buttons(this.menu_tree_p, \"Node label size\", \"buton_node_label_\", this.container_object.update_font_size_node_percent)\n\n\n\n\n\n        // COLLAPSE\n\n        this.slider_c = this.add_slider_UI(this.menu_general_p,\n            this.viewer.model.settings.collapse_level == 0 ? \"Autocollapse: Off\" : \"Autocollapse: \" + this.viewer.model.settings.collapse_level,\n            0, this.viewer.model.settings.tree.max_depth , this.viewer.model.settings.collapse_level, 0,\"slider_collapse_level_\",)\n        document.getElementById(\"slider_collapse_level_\" + this.container_object.uid).onchange = (e) => {\n\n\n            this.viewer.update_collapse_level(e.target.value, false)\n            var lab = e.target.value == 0 ? \"Autocollapse: Off\" : \"Autocollapse: \" + this.viewer.model.settings.collapse_level;\n\n            document.getElementById(\"slider_collapse_level_\" + this.container_object.uid)\n                .parentElement.previousSibling.innerHTML = lab;\n\n            }\n\n\n        if (this.api.settings.compareMode) {\n            // equalize tree\n            this.menu_general_p.append(\"p\").text('Equalize trees')\n                .style('margin-bottom', '0px')\n\n\n            this.equalize_div = this.menu_general_p.append('div')\n                .style('display', 'flex')\n                .style('margin-top', '0px')\n\n\n            this.equalize_div.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'equ_reroot' + this.viewer.uid)\n                .on(\"click\", d => {\n                    this.container_object.reroot_to_compared_tree()\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Reroot\")\n\n\n            this.equalize_div.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'equ_reorder' + this.viewer.uid)\n                .on(\"click\", d => {\n                    this.container_object.reorder_to_compared_tree()\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Reorder\")\n        }\n\n\n        // ADD TOGGLE MULTIPLE SEARCH\n        this.add_swicth_UI(this.menu_search_p, this.viewer.model.settings.multiple_search,\"Multiple search\",   this.viewer.toggle_multiple_search.bind(this.viewer))\n\n\n        /*\n        // ADDITIONAL DATA\n        var meta_div = this.menu_metadata_p.append('div')\n            .style('display','block')\n            //.style('margin','8px')\n\n\n        meta_div.append('p').text(\"Mapping file\").style('font-weight','bold')\n\n\n        meta_div.append('input')\n            .attr('id','filemeta' + this.container_object.uid )\n            .attr('type','file')\n            .style('margin-bottom','16px')\n\n\n        this.add_swicth_UI(this.menu_metadata_p, this.viewer.model.settings.use_meta_for_leaf,\"Apply to leaves\",   this.viewer.toggle_use_meta_for_leaf.bind(this.viewer) )\n        this.add_swicth_UI(this.menu_metadata_p, this.viewer.model.settings.use_meta_for_node,\"Apply to nodes\",   this.viewer.toggle_use_meta_for_node.bind(this.viewer))\n\n\n        this.meta_div = this.menu_metadata_p.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n\n\n        this.button_meta = this.meta_div.append('button')\n            .attr('id','button_add_meta' + this.container_object.uid )\n            .on(\"click\", (e) => {\n\n                var file = document.getElementById('filemeta' + this.container_object.uid).files[0];\n\n                if (file) {\n                    const reader = new FileReader();\n                    reader.addEventListener('load', (event) => {\n\n                        var meta = []\n\n                        d3.csvParse(event.target.result, (d) => {meta[d.id] = d});\n\n                        if (this.viewer.model.settings.use_meta_for_leaf){\n                            this.viewer.model.add_meta_leaves(meta)\n                        }\n\n                        if (this.viewer.model.settings.use_meta_for_node){\n                            this.viewer.model.add_meta_nodes(meta)\n                        }\n\n                        this.viewer.interface = new Interface(this.viewer, this.viewer.container_object)\n\n                    });\n                    reader.readAsText(file);\n\n                }\n\n\n\n            })\n            .attr('class', ' square_button')\n            .style('border-radius', '2px')\n            .style('flex-grow', '1')\n            .style('background-color', '#CCC')\n            .text('Use this file')\n\n\n         */\n\n\n        // COLORING\n        var that = this;\n\n\n        this.menu_coloring_p.append('p').text(\"Leaves\").style('font-weight','bold')\n\n        var color_leaves_div = this.menu_coloring_p.append('div')\n            .style('display','block')\n            .style('margin-left','8px')\n\n        var options = Array.from(this.viewer.model.settings.colorlabels['leaf'])\n\n        if (options.length > 0){\n\n            options.unshift('None')\n\n            color_leaves_div.append('label').text(\"Data\")\n\n            var selectcoloring_leaf = color_leaves_div.append('select')\n                .attr('id','selectcoloring_leaf' + this.container_object.uid )\n                .attr('class','select')\n                .style('float','right')\n                .on('change', function(){\n\n                    that.on_change_coloring_scheme('leaf', this.value)\n\n                })\n\n\n\n            selectcoloring_leaf.selectAll('option').data(options).enter()\n                .append('option')\n                .attr('value', function (d) {\n                    return d; })\n                .property(\"selected\", (d) => { return d == this.viewer.model.settings.style.color_accessor['leaf'] })\n                .text(function (d) { return d; });\n\n\n\n\n            this.color_leaf_div = this.menu_coloring_p.append('div')\n\n        }\n        else {\n            color_leaves_div.style('float','right').append('label').text(\"No Data available\");\n            this.menu_coloring_p.append('br')\n\n        }\n\n\n        this.menu_coloring_p.append('p').text(\"Nodes\").style('font-weight','bold').style('margin-top','8px')\n\n        var drop = this.menu_coloring_p.append('div')\n            .style('display','block')\n            .style('margin-left','8px')\n\n\n        drop.append('label').text(\"Data\");\n\n        var selectcoloring = drop.append('select')\n            .attr('id','selectcoloring' + this.container_object.uid )\n            .attr('class','select')\n            .style('float','right')\n            .on('change', function(){\n\n                that.on_change_coloring_scheme('node', this.value)\n\n        })\n\n        var options = Array.from(this.viewer.model.settings.colorlabels['node'])\n        options.push(\"None\")\n\n        selectcoloring.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; })\n            .property(\"selected\", (d) => { return d == this.viewer.model.settings.style.color_accessor['node'] })\n            .text(function (d) { return d; });\n\n\n        this.color_node_div = this.menu_coloring_p.append('div')\n\n        this.create_color_scheme_picker('node')\n\n\n        }\n\n    on_change_coloring_scheme(type, val){\n\n        this.viewer.model.settings.style.color_accessor[type] =  val === 'None' ? null : val;\n\n        console.log()\n\n        this.create_color_scheme_picker(type)\n\n        this.viewer.set_color_scale(type);\n        this.viewer.render(this.viewer.hierarchy)\n\n        this.remove_color_legend(type)\n        if(this.viewer.model.settings.style.color_accessor[type]) {\n            this.add_color_legend(type)\n        }\n\n        this.menu_coloring_panel.style(\"max-height\", this.menu_coloring_p.style(\"height\"))\n\n    }\n\n    create_color_scheme_picker(type){\n\n        var acc = this.viewer.model.settings.style.color_accessor[type]\n        var type_acc = this.viewer.model.settings.extended_data_type[acc]\n\n\n        if (type == 'leaf'){\n            var container_ = this.color_leaf_div\n            container_.html('')\n        }\n\n        else if (type == 'node'){\n            var container_ = this.color_node_div\n            container_.html('')\n        }\n\n        if (type_acc == 'num'){\n\n            var domain_leaf = container_.append('div')\n                .style('display','block')\n                .style('margin','12px')\n\n            domain_leaf.append('label').text(\"# domain\");\n\n            domain_leaf.append('input')\n                .attr('id','inputcoloring_' + type + this.container_object.uid )\n                .attr('type','number')\n                .attr('name','quantity')\n                .attr('min','2')\n                .attr('value', this.viewer.model.settings.style.number_domain[type])\n                .attr('max','5')\n                .style('float','right')\n                .on('change', (d) => {\n                    this.viewer.model.settings.style.number_domain[type] =  document.getElementById('inputcoloring_' + type + this.container_object.uid ).value;\n                    this.create_color_picker(type)\n                    this.viewer.set_color_scale(type);\n                    this.viewer.render(this.viewer.hierarchy)\n\n\n                })\n\n\n            var colcol = container_.append('div')\n                .style('display','block')\n                .style('margin','8px')\n\n            colcol.append('label').text(\"Color\");\n\n            colcol.append(\"span\").attr('id',type + '_colorspan_' + this.container_object.uid );\n\n            this.create_color_picker(type)\n\n        }\n\n\n        else if (type_acc == 'color' ){\n            container_.append('label').text(\"Use color loaded\").style('float', 'right');\n            container_.append('br')\n            this.viewer.set_color_scale(type);\n            this.viewer.render(this.viewer.hierarchy)\n        }\n\n        else if (type_acc == 'cat' || typeof type_acc == 'undefined'){\n            container_.append('label').text(\"Default color scheme\").style('float', 'right');\n            container_.append('br')\n            this.viewer.set_color_scale(type);\n            this.viewer.render(this.viewer.hierarchy)\n        }\n\n        else{\n            container_.append('label').text(\"\");\n        }\n\n\n\n\n}\n\n    create_color_picker(type){\n\n        var colspan = d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + type + '_colorspan_' + this.container_object.uid)\n\n        colspan.html(\"\")\n\n\n        var number = this.viewer.model.settings.style.number_domain[type];\n        var default_color = this.viewer.model.settings.style.color_domain_default[type];\n        var w = Math.round(135/number);\n        var color = []\n\n        switch (number) {\n            case '2':\n                color = [default_color[0], default_color[4]]\n                break;\n            case '3':\n                color = [default_color[0],default_color[2], default_color[4]]\n                break;\n            case '4':\n                color = [default_color[0],default_color[1],default_color[2], default_color[4]]\n                break;\n            case '5':\n                color = default_color\n\n        }\n\n\n\n         for (let i = 0; i < number; i++) {\n             var idd = type + '_color_picker_' + this.viewer.container_object.uid + '_' + i;\n             colspan.append(\"span\").style('display',' inline-block').style('float','right')\n                 .html(\"<input class='colpicker_\" + type + \"' type=\\\"color\\\"  id=\\\"\"+idd+\"\\\"  style='width:\" + w +\"px;'name=\\\"favcolor\\\" value=\\\"\" + color[i] + \"\\\">\")\n\n             d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + idd).on('change', () => {\n\n\n                 this.update_color_pickers(type)\n\n                 this.viewer.set_color_scale(type);\n                 this.viewer.render(this.viewer.hierarchy)\n                 this.remove_color_legend(type)\n                 this.add_color_legend(type)\n             })\n\n         }\n\n\n\n\n         this.viewer.model.settings.style.color_domain[type] = color;\n\n    }\n\n    update_color_pickers(type){\n\n        var colspan = d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + type + '_colorspan_' + this.container_object.uid)\n\n\n        var new_col = []\n        colspan.selectAll(\".colpicker_\" + type).each(function(d){\n            new_col.push(this.value)\n        })\n\n        this.viewer.model.settings.style.color_domain[type] = new_col\n\n\n\n    }\n\n    add_swicth_UI(parent, checked, label, f){\n\n        var lab = parent.append('label').style(\"display\", 'inline-block')\n            .attr(\"class\",\"switch\")\n\n        lab.append('input').attr('type', 'checkbox' ).property('checked', checked);\n        lab.append('span').attr(\"class\",\"slider_t round\")\n            .on('click', (d) => { f()} )\n\n        parent.append('p').text(label).style(\"display\", 'inline-block').style(\"margin-left\", '12px')\n        parent.append('br')\n\n    }\n\n    add_node_face_UI(parent,container_id){\n\n        var w = 220;\n        var h = 160;\n        var gutter = 20\n\n        var s = parent.append(\"svg\")\n            .attr('display', 'block')\n            .attr(\"width\", w )\n            .attr(\"height\", h)\n\n        s.append('line')\n            .style(\"stroke\", \"black\")\n            .style(\"stroke-width\", 2)\n            .attr(\"x1\", gutter/2)\n            .attr(\"y1\", h/2)\n            .attr(\"x2\", w/2)\n            .attr(\"y2\", h/2);\n\n        s.append('line')\n            .style(\"stroke\", \"black\")\n            .style(\"stroke-width\", 2)\n            .attr(\"x1\", w/2)\n            .attr(\"y1\", gutter)\n            .attr(\"x2\", w/2)\n            .attr(\"y2\", h-gutter);\n\n        s.append('line')\n            .style(\"stroke\", \"black\")\n            .style(\"stroke-width\", 2)\n            .attr(\"x1\", w/2)\n            .attr(\"y1\", gutter)\n            .attr(\"x2\", w-gutter)\n            .attr(\"y2\", gutter);\n\n        s.append('line')\n            .style(\"stroke\", \"black\")\n            .style(\"stroke-width\", 2)\n            .attr(\"x1\", w/2)\n            .attr(\"y1\", h-gutter)\n            .attr(\"x2\", w-gutter)\n            .attr(\"y2\", h-gutter);\n\n        s.append('circle')\n            .attr('cx', w/2)\n            .attr('cy', h/2)\n            .attr('r', 5)\n            .attr('stroke', 'black')\n            .attr('fill', '#69a3b2');\n\n\n        var l = Array.from(this.viewer.model.settings.labels['node'])\n\n        var options = [\"None\"]\n        options = options.concat(l)\n\n        var that = this\n\n        var selectlt = parent.append('select').attr('id','selectlt' + container_id ).attr('class','select dropdrop ').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label_left_top = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n\n        var selectlb = parent.append('select').attr('id','selectlb' + container_id ).attr('class','select dropdrop ').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label_left_bottom = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n\n        var selectr = parent.append('select').attr('id','selectr' + container_id ).attr('class','select dropdrop').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n\n        selectlt.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectlb.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectr.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n\n\n\n        function selectElement(id, valueToSelect) {\n            let element = document.getElementById(id);\n            element.value = valueToSelect;\n        }\n\n        selectElement('selectr' + container_id, this.viewer.model.settings.display_internal_label == false ? \"None\" : this.viewer.model.settings.display_internal_label )\n        selectElement('selectlb' + container_id, this.viewer.model.settings.display_internal_label_left_bottom == false ? \"None\" : this.viewer.model.settings.display_internal_label_left_bottom )\n        selectElement('selectlt' + container_id, this.viewer.model.settings.display_internal_label_left_top == false ? \"None\" : this.viewer.model.settings.display_internal_label_left_top )\n\n\n    }\n\n\n    add_quartet_buttons(parent, label, id, f, aux){\n\n        var f = f || function(){};\n        var aux = aux || null;\n\n        parent.append(\"p\").text(label)\n            .style('margin-bottom','0px')\n            .style('font-weight','bold')\n\n        var buttons = parent.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty1 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'first' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n        butty_putty1.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '12px')\n            .attr('class', ' fas fa-minus ')\n\n        butty_putty1.append('p')\n            .text('-50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        var butty_putty2 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'second' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n        butty_putty2.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '8px')\n            .attr('class', ' fas fa-minus ')\n\n        butty_putty2.append('p')\n            .text('-20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty3 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'third' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty3.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '8px')\n            .attr('class', ' fas fa-plus ')\n\n        butty_putty3.append('p')\n            .text('+20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n\n        var butty_putty4 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'fourth' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty4.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '12px')\n            .attr('class', ' fas fa-plus ')\n\n        butty_putty4.append('p')\n            .text('+50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        return buttons\n\n\n\n    }\n\n    add_slider_UI(parent, label, min, max, current, step, id, f){\n\n        var f = f || function(){};\n\n        parent.append(\"p\").text(label).style('margin-bottom','0px').style('font-weight','bold')\n\n        var d = parent.append('div')\n            .attr(\"class\",\"slidecontainer\")\n\n        var input =  d.append('input').attr(\"class\",\"slider\")\n            .attr('type', 'range' )\n            .attr('min', min )\n            .attr('max', max )\n            .attr('value', current )\n            //.attr('step', step )\n            .attr('id', id + this.container_object.uid )\n            .on('click', (e) => { f(e)} )\n            .style('margin-bottom','12px')\n\n        return input\n\n\n\n    }\n\n    update_slider(slide ,value){\n        slide.attr('value', value);\n    }\n\n    //OLD PHYLO COPY PASTE todo clean\n    // Below are the functions that handle actual exporting:\n    // getSVGString ( svgNode ) and svgString2Image( svgString, width, height, format, callback )\n    getSVGString( svgNode ) {\n        svgNode.setAttribute('xlink', 'http://www.w3.org/1999/xlink');\n        var cssStyleText = getCSSStyles( svgNode );\n        appendCSS( cssStyleText, svgNode );\n\n        var serializer = new XMLSerializer();\n        var svgString = serializer.serializeToString(svgNode);\n        svgString = svgString.replace(/(\\w+)?:?xlink=/g, 'xmlns:xlink='); // Fix root xlink without namespace\n        svgString = svgString.replace(/NS\\d+:href/g, 'xlink:href'); // Safari NS namespace fix\n\n        return svgString;\n\n        function getCSSStyles( parentElement ) {\n            var selectorTextArr = [];\n\n            // Add Parent element Id and Classes to the list\n            selectorTextArr.push( '#'+parentElement.id );\n            for (var c = 0; c < parentElement.classList.length; c++)\n                if ( !contains('.'+parentElement.classList[c], selectorTextArr) )\n                    selectorTextArr.push( '.'+parentElement.classList[c] );\n\n            // Add Children element Ids and Classes to the list\n            var nodes = parentElement.getElementsByTagName(\"*\");\n            for (var i = 0; i < nodes.length; i++) {\n                var id = nodes[i].id;\n                if ( !contains('#'+id, selectorTextArr) )\n                    selectorTextArr.push( '#'+id );\n\n                var classes = nodes[i].classList;\n                for (var c = 0; c < classes.length; c++)\n                    if ( !contains('.'+classes[c], selectorTextArr) )\n                        selectorTextArr.push( '.'+classes[c] );\n            }\n\n            // Extract CSS Rules\n            var extractedCSSText = \"\";\n            for (var i = 0; i < document.styleSheets.length; i++) {\n                var s = document.styleSheets[i];\n\n                try {\n                    if(!s.cssRules) continue;\n                } catch( e ) {\n                    if(e.name !== 'SecurityError') throw e; // for Firefox\n                    continue;\n                }\n\n                var cssRules = s.cssRules;\n                for (var r = 0; r < cssRules.length; r++) {\n                    if ( contains( cssRules[r].selectorText, selectorTextArr ) )\n                        extractedCSSText += cssRules[r].cssText;\n                }\n            }\n\n\n            return extractedCSSText;\n\n            function contains(str,arr) {\n                return arr.indexOf( str ) === -1 ? false : true;\n            }\n\n        }\n\n        function appendCSS( cssText, element ) {\n            var styleElement = document.createElement(\"style\");\n            styleElement.setAttribute(\"type\",\"text/css\");\n            styleElement.innerHTML = cssText;\n            var refNode = element.hasChildNodes() ? element.children[0] : null;\n            element.insertBefore( styleElement, refNode );\n        }\n    }\n\n    svgString2Image( svgString, width, height, format, callback ) {\n        var format = format ? format : 'png';\n\n        var imgsrc = 'data:image/svg+xml;base64,'+ btoa( unescape( encodeURIComponent( svgString ) ) ); // Convert SVG string to dataurl\n\n        var canvas = document.createElement(\"canvas\");\n        var context = canvas.getContext(\"2d\");\n\n        canvas.width = width;\n        canvas.height = height;\n\n        var image = new Image;\n        image.onload = function() {\n\n            context.clearRect ( 0, 0, width, height );\n            context.fillStyle = \"#ffffff\";\n            context.fillRect(0, 0, width, height);\n            context.drawImage(image, 0, 0, width, height);\n\n            canvas.toBlob( function(blob) {\n                var filesize = Math.round( blob.length/1024 ) + ' KB';\n                if ( callback ) callback( blob, filesize );\n            });\n        };\n        image.src = imgsrc;\n    }\n\n    addLogo(svg) {\n        // TODO load with ajax\n        var logo_xml = '<svg id=\"exportLogo\" x=\"0\" y=\"0\"><g id=\"g4169\"> <path d=\"m 29.606259,23.679171 1.905511,0 c 0.193778,0.617882 0.290669,1.188505 0.290672,1.711869 0.466506,-0.545171 1.022728,-0.99222 1.668668,-1.341146 0.653108,-0.348904 1.295455,-0.523362 1.927043,-0.523373 0.976073,1.1e-5 1.86603,0.261698 2.669869,0.78506 0.810999,0.523383 1.442581,1.221215 1.894747,2.093495 0.459321,0.865028 0.688986,1.802739 0.688998,2.813134 -1.2e-5,1.010407 -0.229677,1.951752 -0.688998,2.824038 -0.452166,0.865023 -1.083748,1.559219 -1.894747,2.082592 -0.803839,0.516105 -1.693796,0.774156 -2.669869,0.774157 -0.638765,-1e-6 -1.284701,-0.163554 -1.937809,-0.490663 -0.653117,-0.334377 -1.20575,-0.770521 -1.657902,-1.308434 l 0,6.542172 -1.711731,0 0,-12.713622 c -2e-6,-0.552441 -0.04665,-1.170313 -0.139953,-1.853616 -0.08613,-0.683283 -0.20096,-1.148504 -0.344499,-1.395663 m 2.196183,5.539039 c -3e-6,1.133981 0.355261,2.093499 1.065795,2.878557 0.717702,0.777793 1.561006,1.166688 2.529916,1.166687 0.954543,10e-7 1.79067,-0.392528 2.508385,-1.177592 0.717697,-0.785056 1.07655,-1.740939 1.076561,-2.867652 -1.1e-5,-1.1267 -0.358864,-2.082583 -1.076561,-2.867652 -0.717715,-0.79232 -1.553842,-1.188485 -2.508385,-1.188495 -0.96891,10e-6 -1.812214,0.396175 -2.529916,1.188495 -0.710534,0.785069 -1.065798,1.740952 -1.065795,2.867652\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4145\" /> <path d=\"m 43.224746,34.75725 0,-16.279106 1.711731,0 0,7.152775 c 0.437798,-0.610593 0.94378,-1.112159 1.517951,-1.504699 0.581337,-0.399789 1.151913,-0.599688 1.71173,-0.599699 0.602867,1.1e-5 1.141147,0.123585 1.614841,0.370723 0.473678,0.23989 0.854062,0.570633 1.141153,0.99223 0.287074,0.421615 0.502386,0.897739 0.645937,1.428373 0.143531,0.523382 0.215302,1.083101 0.215312,1.679158 l 0,6.760245 -1.6902,0 0,-6.760245 c -8e-6,-0.33437 -0.0323,-0.65421 -0.09689,-0.959518 -0.05742,-0.305294 -0.154315,-0.603326 -0.290672,-0.894097 -0.136371,-0.298024 -0.337329,-0.534268 -0.602873,-0.708736 -0.265559,-0.181718 -0.584938,-0.272581 -0.958139,-0.272591 -0.473692,10e-6 -0.96891,0.243524 -1.485653,0.730544 -0.509576,0.487036 -0.925846,1.05039 -1.24881,1.69006 -0.315795,0.632417 -0.47369,1.177598 -0.473687,1.635543 l 0,5.53904 -1.711731,0\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4147\" /> <path d=\"m 53.581256,23.679171 1.776325,0 3.423461,8.472114 3.337338,-8.472114 1.797856,0 -6.4163,16.388142 -1.819387,0 2.22848,-5.658979 -4.327773,-10.729163\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4149\" /> <path d=\"m 67.415055,34.75725 -1.71173,0 0,-16.279106 1.71173,0 0,16.279106\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4151\" /> <path d=\"m 80.882824,26.361462 c 0.523914,0.872297 0.785877,1.824546 0.785889,2.856748 -1.2e-5,1.032215 -0.261975,1.984463 -0.785889,2.856749 -0.523937,0.872291 -1.234467,1.562854 -2.131589,2.071689 -0.897143,0.501566 -1.873223,0.752348 -2.928244,0.752349 -1.062213,-1e-6 -2.04547,-0.250783 -2.949776,-0.752349 -0.897136,-0.508835 -1.607665,-1.199398 -2.131589,-2.071689 -0.523928,-0.872286 -0.78589,-1.824534 -0.785889,-2.856749 -10e-7,-1.032202 0.261961,-1.984451 0.785889,-2.856748 0.523924,-0.87955 1.234453,-1.570111 2.131589,-2.071688 0.904306,-0.508825 1.887563,-0.763242 2.949776,-0.763253 1.055021,1.1e-5 2.031101,0.254428 2.928244,0.763253 0.897122,0.501577 1.607652,1.192138 2.131589,2.071688 m -9.20459,2.856748 c -3e-6,1.126713 0.405501,2.082596 1.216513,2.867652 0.811004,0.785064 1.794261,1.177593 2.949775,1.177592 1.1555,10e-7 2.142346,-0.392528 2.960541,-1.177592 0.818175,-0.792325 1.227268,-1.748208 1.227279,-2.867652 -1.1e-5,-1.112162 -0.409104,-2.060776 -1.227279,-2.845844 -0.818195,-0.792321 -1.805041,-1.188485 -2.960541,-1.188495 -1.155514,10e-6 -2.138771,0.396174 -2.949775,1.188495 -0.811012,0.785068 -1.216516,1.733682 -1.216513,2.845844\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4153\" /> <path d=\"m 84.532366,34.0049 c -2e-6,-0.247148 0.08612,-0.457951 0.258374,-0.63241 0.172247,-0.181725 0.380382,-0.272588 0.624405,-0.27259 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style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee\" id=\"path4159\" /> </g> <g id=\"g4014\" transform=\"translate(12.84,20.592727)\"> <g transform=\"translate(0,-0.065)\" id=\"g3992\"> <polygon style=\"fill:#939598\" id=\"polygon461\" points=\"5.7,0.23 11.86,0.23 11.86,1.65 7.12,1.65 7.12,6.04 11.86,6.04 11.86,7.46 11.86,7.46 5.7,7.46 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon463\" points=\"0,7.08 3.51,7.08 3.51,8.49 1.43,8.49 1.45,15.84 12.68,15.84 12.68,17.26 12.68,17.26 0.04,17.26 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon465\" points=\"10.49,11.02 10.49,12.44 10.49,12.44 2.84,12.44 2.84,7.79 4.26,7.79 4.26,11.02 \" class=\"cls-2\" transform=\"translate(0,-0.15225398)\" /> <polygon style=\"fill:#bcbec0\" id=\"polygon467\" points=\"4.26,4.55 4.26,7.79 4.26,7.79 2.84,7.79 2.84,3.13 6.41,3.13 6.41,4.55 \" class=\"cls-3\" transform=\"matrix(1,0,0,0.85463687,0,0.4549866)\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-3\" width=\"1.4240631\" height=\"1.7319686\" x=\"2.8396611\" y=\"7.0799503\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-6\" width=\"1.3864813\" height=\"1.6934805\" x=\"5.7012329\" y=\"2.9206221\" /> </g> <g id=\"g4005\"> <g id=\"g3984\"> <polygon class=\"cls-2\" points=\"94.93,12.33 94.93,10.91 99.87,10.91 99.87,6.46 94.93,6.46 94.93,5.04 101.29,5.04 101.29,12.33 101.29,12.33 \" id=\"polygon453\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"94.72,17.36 94.72,15.94 104.87,15.94 104.9,5.41 102.74,5.41 102.74,3.99 106.32,3.99 106.29,17.36 106.29,17.36 \" id=\"polygon455\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"95.51,1.42 95.51,0 103.45,0 103.45,4.7 103.45,4.7 102.03,4.7 102.03,1.42 \" id=\"polygon457\" style=\"fill:#939598\" /> <polygon class=\"cls-3\" points=\"102.03,7.97 102.03,4.7 103.45,4.7 103.45,9.39 103.45,9.39 100.65,9.39 100.65,7.97 \" id=\"polygon459\" style=\"fill:#bcbec0\" /> <rect y=\"3.9876499\" x=\"102.02941\" height=\"1.4238259\" width=\"1.4579451\" id=\"rect3926\" style=\"fill:#939598;fill-opacity:1\" /> <rect y=\"7.884686\" x=\"99.887817\" height=\"1.6934805\" width=\"1.397205\" id=\"rect3926-7\" style=\"fill:#939598;fill-opacity:1\" /> </g> </g> </g> </g> </svg>';\n\n\n        svg.append(\"g\").html(logo_xml);\n\n    }\n\n    add_empty_message(){\n\n\n        this.container_d3.selectAll(\".empty_message\").remove()\n\n\n        /*if (phylo.phylo_embedded){\n\n            if (phylo.bound_container[0]==this.container_object){\n                tooltip_object[0].show()\n                tooltip_object[3].show()\n                }\n\n        }\n\n         */\n\n\n\n        this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'empty_message')\n            .attr('width',this.viewer.width )\n            .attr(\"transform\", \"translate(\"+ (this.viewer.width/2)+\",\" + (this.viewer.height/2)  + \")\")\n            .append(\"text\")\n            .attr(\"fill\", \"#333\")\n            .attr('text-anchor', 'middle')\n            .style('font-size', '1.2em')\n            .html('No tree here ! You can <a href=\"#\" id=\"add_tree_link' + this.container_object.uid +'\">add a tree</a> or use examples below.')\n\n        document.querySelector('#add_tree_link'+ this.container_object.uid).addEventListener('click', event => {\n            $('#exampleModal' + this.container_object.uid).modal('show')\n        });\n\n\n\n        this.viewer.svg_d3.node().append('text')\n            .attr(\"class\", 'empty_message')\n            .attr(\"transform\", \"translate(\"+ (this.viewer.width/2)+\",\" + (this.viewer.height/2 + 24)  + \")\")\n            .attr('text-anchor', 'middle')\n            .attr(\"fill\", \"#bbb\")\n            .html(\"Ready to use examples: <a id='ex1\"+ this.container_object.uid +\"' style='cursor:pointer;text-decoration: underline'>Tree bundle #1</a> - <a style='cursor:pointer;text-decoration: underline' id='ex2\"+ this.container_object.uid +\"'>Tree bundle #2</a> \")\n\n\n\n            document.querySelector('#ex1'+ this.container_object.uid).addEventListener('click', event => {\n                this.container_object.add_tree(this.examples[\"LRF1\"],{'data_type': 'nhx'})\n                this.container_object.add_tree(this.examples[\"r2t\"])\n                this.container_object.add_tree(this.examples[\"unrooted1\"])\n                this.container_object.add_tree(this.examples[\"small1\"])\n\n\n                this.api.start()\n            });\n\n        document.querySelector('#ex2'+ this.container_object.uid).addEventListener('click', event => {\n\n            this.container_object.add_tree(this.examples[\"LRF2\"],{'data_type': 'nhx'})\n            this.container_object.add_tree(this.examples[\"rokas\"])\n            this.container_object.add_tree(this.examples[\"nhx\"],{'data_type': 'nhx'})\n            this.container_object.add_tree(this.examples[\"unrooted2\"])\n            this.container_object.add_tree(this.examples[\"small2\"])\n            this.container_object.add_tree(this.examples[\"stack\"],{'data_type': 'json', 'use_branch_lenght': false, 'show_histogram':true, 'collapse_level': 2})\n            this.api.start()\n        });\n\n    }\n\n\n}\n\n//# sourceURL=webpack://PhyloIO/./src/interface.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Interface)\n/* harmony export */ });\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\");\n/* harmony import */ var file_saver__WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(file_saver__WEBPACK_IMPORTED_MODULE_0__);\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var bootstrap__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! bootstrap */ \"./node_modules/bootstrap/dist/js/bootstrap.esm.js\");\n/* harmony import */ var d3_scale_chromatic__WEBPACK_IMPORTED_MODULE_4__ = __webpack_require__(/*! d3-scale-chromatic */ \"./node_modules/d3-scale-chromatic/src/index.js\");\n/* harmony import */ var _utils__WEBPACK_IMPORTED_MODULE_3__ = __webpack_require__(/*! ./utils */ \"./src/utils.js\");\n/* harmony import */ var _utils__WEBPACK_IMPORTED_MODULE_3___default = /*#__PURE__*/__webpack_require__.n(_utils__WEBPACK_IMPORTED_MODULE_3__);\n\n\n\n\n\n\n// D3 viewer Interface that render UI elements(buttons, slider, menu)\nclass Interface {\n\n    constructor(v,c, empty_mode){\n\n        var empty_mode = (typeof empty_mode !== 'undefined') ? empty_mode : false;\n\n        this.scale_pixel_length = 120;\n\n        this.container_object = c\n        this.viewer = v\n        this.container_d3 = v.container_d3\n        this.api = this.container_object.api\n\n        //MISC\n        this.dismiss_blur = false\n\n        this.examples={\n            \"small1\": \"((yli:1.0085614391793067,(((lel:0.2880678599618948,(cal:0.11643570498932501,ctr:0.12746420698315983):0.0877413194006926):0.12449843844102518,pst:0.20187483296288805):0.04951181210826987,(pgu:0.3208350693977453,dha:0.19121342958249643):0.0444880656387921):0.3761988962574594):0.22545281705785974,(((kla:0.32829009627835226,ago:0.35217085340006204):0.057415467336693615,(skl:0.15813405639248146,kwa:0.25658337062111586):0.04348414441988464):0.036897766465122404,(cgl:0.29957965624763355,(sca:0.24212307199678842,(sba:0.03984952076326609,(((sce:0.022286259220280224,spa:0.016875934069075366):0.01282179619059339,smi:0.03661027033511007):0.013312280806766753,sku:0.042685124078088485):0.014142671709463695):0.17548658899657893):0.03625000527459598):0.08921537612721808):0.22545281705785974):0;\",\n            \"small2\": \"((sba:0.04645932805874481569,(smi:0.03315550229946162553,(spa:0.01466907419174275952,sce:0.02383733069302066895):0.01620853054082276729):0.01834962617511207497):0.06496501071301066799,(sca:0.21928497146352055047,((((ago:0.34529718349701971070,kla:0.26611733077459831520):0.04460721000595434249,(kwa:0.23458417353426505580,skl:0.38245746198409408256):0.02217438839159899949):0.02847427462232336726,(((pst:0.21220493191897629726,((cal:0.09792303271040220247,ctr:0.11778282966461572911):0.07993742108354510989,lel:0.23757786374413303321):0.09896075353236584438):0.04667831716440219020,(pgu:0.28475663985974825065,dha:0.17797706546403241346):0.04249479494672471491):0.29326816910580705278,yli:0.72911704942210797675):0.31199925135971823265):0.06946141605430436461,cgl:0.27125751484306920291):0.03678319509837457008):0.09011350505801994648,sku:3.28511106679567399524):0.0;\",\n            \"big\": 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           \"stack\" : {\"children\": [{\"children\": [{\"children\": [{\"children\": [{\"id\": \"HALHT\", \"last_updated\": \"Aug 20, 2012\", \"name\": \"Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755)\", \"nr_proteins\": 3855, \"release\": \"18-OCT-2011 (Rel. 110, Last updated, Version 2)\", \"source\": \"EBI\", \"taxid\": 634497}, {\"id\": \"HALMA\", \"last_updated\": \"Mar 25, 2014\", \"name\": \"Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)\", \"nr_proteins\": 4231, \"release\": \"02-FEB-2014 (Rel. 119, Last updated, Version 9)\", \"source\": \"EBI\", \"taxid\": 272569}], \"name\": \"Haloarcula\", \"taxid\": 2237, \"nr_hogs\": 4107, \"evolutionaryEvents\": {\"gained\": 178, \"retained\": 3532, \"duplicated\": 397, \"lost\": 1508, \"duplications\": 166}}, {\"id\": \"HALMD\", \"last_updated\": \"Nov 23, 2009\", \"name\": \"Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 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.002093[&&NHX:D=N:B=100:T=9596],ENSP00000369497:0.001566[&&NHX:D=N:T=9606]):0.000219[&&NHX:D=N:B=17:T=207598],ENSGGOP00000027226:0.002031[&&NHX:D=N:T=9595]):0.004252[&&NHX:D=N:B=17:T=207598],ENSPPYP00000005997:0.007072[&&NHX:D=N:T=9601]):0.002903[&&NHX:D=N:B=99:T=9604],ENSNLEP00000001277:0.009571[&&NHX:D=N:T=61853]):0.002446[&&NHX:D=N:B=98:T=314295],(((((ENSCATP00000015406:0.00209[&&NHX:D=N:T=9531],ENSMLEP00000025266:0.0034[&&NHX:D=N:T=9568]):0.000372[&&NHX:D=N:B=60:T=9528],ENSPANP00000022490:0.001777[&&NHX:D=N:T=9555]):0.000724[&&NHX:D=N:B=54:T=9528],((ENSMFAP00000029418:0.001032[&&NHX:D=N:T=9541],ENSMMUP00000009432:0.005844[&&NHX:D=N:T=9544]):0.000105[&&NHX:D=N:B=40:T=9539],ENSMNEP00000025034:0.002176[&&NHX:D=N:T=9545]):0.001473[&&NHX:D=N:B=34:T=9539]):0.000352[&&NHX:D=N:B=54:T=9528],ENSCSAP00000013938:0.003981[&&NHX:D=N:T=60711]):0.00179[&&NHX:D=N:B=55:T=9528],(ENSRROP00000030947:0[&&NHX:D=N:T=61622],ENSRBIP00000000297:0.022474[&&NHX:D=N:T=61621]):0.008142[&&NHX:D=N:B=92:T=542827]):0.008355[&&NHX:D=N:B=58:T=9527]):0.007639[&&NHX:D=N:B=87:T=9526],((ENSCCAP00000031676:0.011669[&&NHX:D=N:T=2715852],ENSCJAP00000093240:0.015902[&&NHX:D=N:T=9483]):0.000332[&&NHX:D=N:B=23:T=9498],ENSANAP00000015411:0.01113[&&NHX:D=N:T=37293]):0.015231[&&NHX:D=N:B=23:T=9479]):0.029405[&&NHX:D=N:B=92:T=314293],ENSTSYP00000000441:0.060665[&&NHX:D=N:T=1868482]):0.003827[&&NHX:D=N:B=90:T=376913],(((ENSPCOP00000008219:0.014484[&&NHX:D=N:T=379532],ENSMICP00000044704:0.023431[&&NHX:D=N:T=30608]):0.001594[&&NHX:D=N:B=93:T=376915],ENSPSMP00000026900:0.017253[&&NHX:D=N:T=1328070]):0.012285[&&NHX:D=N:B=93:T=376915],ENSOGAP00000009477:0.064918[&&NHX:D=N:T=30611]):0.013645[&&NHX:D=N:B=99:T=376911]):0.005986[&&NHX:D=N:B=89:T=9443]):0.009172[&&NHX:D=N:B=12:T=314146]):0.008774[&&NHX:D=N:B=12:T=1437010],(ENSDNOP00000034947:0.046866[&&NHX:D=N:T=9361],ENSCHOP00000007822:0.050851[&&NHX:D=N:T=9358]):0.025312[&&NHX:D=N:B=100:T=9348]):0.006165[&&NHX:D=N:B=15:T=9347],((ENSETEP00000003277:0.154194[&&NHX:D=N:T=9371],ENSPCAP00000000440:0.17644[&&NHX:D=N:T=9813]):0.023418[&&NHX:D=N:B=93:T=311790],ENSLAFP00000002234:0.069853[&&NHX:D=N:T=9785]):0.048728[&&NHX:D=N:B=91:T=311790]):0.102726[&&NHX:D=N:B=69:T=9347],(((ENSVURP00010026286:0.02893[&&NHX:D=N:T=29139],ENSMEUP00000009812:0.045949[&&NHX:D=N:T=9315]):0.007079[&&NHX:D=N:B=96:T=38609],ENSSHAP00000012162:0.055381[&&NHX:D=N:T=9305]):0.015112[&&NHX:D=N:B=96:T=9263],ENSMODP00000033276:0.071803[&&NHX:D=N:T=13616]):0.123926[&&NHX:D=N:B=96:T=9263]):0.06077[&&NHX:D=N:B=87:T=32525],ENSOANP00000039689:0.264045[&&NHX:D=N:T=9258]):0.091853[&&NHX:D=N:B=90:T=40674],((((ENSPMRP00000005460:0.144183[&&NHX:D=N:T=64176],ENSSMRP00000016793:0.20051[&&NHX:D=N:T=96440]):0.009903[&&NHX:D=N:B=99:T=1329976],((ENSNSUP00000017478:0.005634[&&NHX:D=N:T=8663],ENSLLTP00000016858:0.029105[&&NHX:D=N:T=8630]):0.226094[&&NHX:D=N:B=100:T=8602],ENSACAP00000031108:0.186787[&&NHX:D=N:T=28377]):0.032366[&&NHX:D=N:B=7:T=1329911]):0.135778[&&NHX:D=N:B=3:T=1329912],ENSSPUP00000018703:0.144411[&&NHX:D=N:T=8508]):0.0332[&&NHX:D=N:B=0:T=8504],((((((ENSACCP00020021048:0.030244[&&NHX:D=N:T=223781],ENSSHBP00005016070:0.046241[&&NHX:D=N:T=2489341]):0.000673[&&NHX:D=N:B=100:T=8825],((((ENSGFOP00000022131:0.015965[&&NHX:D=N:T=48883],ENSSCAP00000011543:0.017989[&&NHX:D=N:T=9135]):0.005354[&&NHX:D=N:B=100:T=9126],ENSTGUP00000012130:0.02239[&&NHX:D=N:T=59729]):0.005211[&&NHX:DD=Y:B=100:T=9126],ENSPMJP00000020154:0.031769[&&NHX:D=N:T=9157]):0.0011[&&NHX:D=N:B=13:T=9126],ENSFALP00000008821:0.024057[&&NHX:D=N:T=59894]):0.055526[&&NHX:D=N:B=13:T=9126]):0.017918[&&NHX:D=N:B=100:T=8825],(((ENSGALP00000027524:0.023757[&&NHX:D=N:T=9031],ENSMGAP00000015990:0.025887[&&NHX:D=N:T=9103]):0.000864[&&NHX:D=N:B=94:T=9005],ENSCJPP00005026171:0.031852[&&NHX:D=N:T=93934]):0.055074[&&NHX:D=N:B=94:T=9005],ENSAPLP00000007411:0.069477[&&NHX:D=N:T=8840]):0.021576[&&NHX:D=N:B=100:T=1549675]):0.027956[&&NHX:D=N:B=98:T=8825],ENSSCUP00000019773:0.055174[&&NHX:D=N:T=441894]):0.138375[&&NHX:D=N:B=98:T=8782],ENSCPRP00005008306:0.1287[&&NHX:D=N:T=8502]):0.016113[&&NHX:D=N:B=0:T=8492],((((ENSTMTP00000024650:0.004017[&&NHX:D=N:T=2587831],ENSTMTP00000012675:0.005315[&&NHX:D=N:T=2587831]):0.002859[&&NHX:D=Y:B=100:T=2587831],ENSCPBP00000004776:0.007644[&&NHX:D=N:T=8478]):0.005658[&&NHX:D=N:B=100:T=8476],(ENSGEVP00005002652:0.01601[&&NHX:D=N:T=1825980],ENSCABP00000011062:0.022245[&&NHX:D=N:T=106734]):0.009454[&&NHX:D=N:B=99:T=8487]):0.01978[&&NHX:D=N:B=99:T=8486],ENSPSIP00000012858:0.064659[&&NHX:D=N:T=13735]):0.046163[&&NHX:D=N:B=100:T=8464]):0.04067[&&NHX:D=N:B=0:T=1329799]):0.101687[&&NHX:D=N:B=9:T=32561]):0.107575[&&NHX:D=N:B=89:T=32524],(ENSXETP00000037057:0.302164[&&NHX:D=N:T=8364],ENSLLEP00000043860:0.366066[&&NHX:D=N:T=445787]):0.181688[&&NHX:D=N:B=96:T=8342]):0.09645[&&NHX:D=N:B=49:T=32523],ENSLACP00000008815:0.24746[&&NHX:D=N:T=7897]):0.045271[&&NHX:D=N:B=14:T=8287],((((((((((((((ENSTNIP00000002435:0.089877[&&NHX:D=N:T=99883],ENSTRUP00000015030:0.091412[&&NHX:D=N:T=31033]):0.146182[&&NHX:D=N:B=100:T=31031],ENSGACP00000015199:0.143397[&&NHX:D=N:T=69293]):0.009443[&&NHX:D=N:B=0:T=1489922],ENSSAUP00010031327:0.096966[&&NHX:D=N:T=8175]):0.004928[&&NHX:D=N:B=0:T=1489922],(ENSDLAP00005043188:0.096295[&&NHX:D=N:T=13489],ENSLBEP00000002832:0.154656[&&NHX:D=N:T=56723]):0.015316[&&NHX:D=N:B=15:T=1489922]):0.007374[&&NHX:D=N:B=0:T=1489922],(ENSSLUP00000030625:0.065993[&&NHX:D=N:T=283035],ENSCGOP00000037196:0.066502[&&NHX:D=N:T=56716]):0.014978[&&NHX:D=N:B=91:T=8111]):0.014192[&&NHX:DD=Y:B=0:T=1489922],(((ENSMAMP00000049017:0.112322[&&NHX:D=N:T=205130],ENSBSLP00000034562:0.168852[&&NHX:D=N:T=158456]):0.008315[&&NHX:D=N:B=0:T=1489892],((ENSSDUP00000015520:0.00513[&&NHX:D=N:T=41447],ENSSLDP00000006566:0.007791[&&NHX:D=N:T=1841481]):0.042577[&&NHX:D=N:B=100:T=8160],ENSLCAP00010030231:0.060104[&&NHX:D=N:T=8187]):0.016173[&&NHX:D=N:B=93:T=1489904]):0[&&NHX:D=N:B=0:T=1489872],(ENSSMAP00000010386:0.11135[&&NHX:D=N:T=52904],ENSATEP00000018320:0.126751[&&NHX:D=N:T=64144]):0.003595[&&NHX:D=N:B=14:T=1489872]):0.014963[&&NHX:DD=Y:B=0:T=1489872]):0.008717[&&NHX:D=N:B=0:T=1489872],(((ENSAOCP00000005723:0.022605[&&NHX:D=N:T=80972],ENSAPOP00000003431:0.032376[&&NHX:D=N:T=80966]):0.067976[&&NHX:D=N:B=100:T=30863],(((ENSMZEP00005015140:0.002522[&&NHX:D=N:T=106582],ENSHBUP00000022221:0.00276[&&NHX:D=N:T=8153]):0.005622[&&NHX:D=N:B=100:T=319058],ENSNBRP00000031193:0.014221[&&NHX:D=N:T=32507]):0.055295[&&NHX:D=N:B=100:T=318546],ENSACIP00000005496:0.085203[&&NHX:D=N:T=61819]):0.069808[&&NHX:D=N:B=97:T=8113]):0.006383[&&NHX:D=N:B=72:T=1489908],(((((((ENSPFOP00000001575:0.001877[&&NHX:D=N:T=48698],ENSPLAP00000026811:0.002682[&&NHX:D=N:T=48699]):0.011341[&&NHX:D=N:B=100:T=8080],ENSPREP00000018297:0.014432[&&NHX:D=N:T=8081]):0.009367[&&NHX:D=N:B=100:T=8080],ENSXMAP00000006983:0.020943[&&NHX:D=N:T=8083]):0.07372[&&NHX:D=N:B=100:T=586240],ENSFHEP00000010259:0.090262[&&NHX:D=N:T=8078]):0.010081[&&NHX:D=N:B=100:T=8087],ENSCVAP00000010146:0.166223[&&NHX:D=N:T=28743]):0.099285[&&NHX:D=N:B=100:T=8087],ENSKMAP00000010397:0.154786[&&NHX:D=N:T=37003]):0.018665[&&NHX:D=N:B=11:T=28738],((ENSORLP00000039367:0.012182[&&NHX:D=N:T=8090],ENSOSIP00000028295:0.023719[&&NHX:D=N:T=183150]):0.048352[&&NHX:D=N:B=100:T=8089],ENSOMEP00000001576:0.066811[&&NHX:D=N:T=30732]):0.195635[&&NHX:D=N:B=100:T=8089]):0.03392[&&NHX:D=N:B=9:T=1489913]):0.027302[&&NHX:D=N:B=0:T=1489908]):0.081822[&&NHX:D=N:B=0:T=1489872],ENSMMDP00005016864:0.115686[&&NHX:D=N:T=586833]):0.133158[&&NHX:D=N:B=0:T=123369],ENSGMOP00000010385:0.447969[&&NHX:D=N:T=8049]):0.04027[&&NHX:D=N:B=1:T=123368],(((ENSSSAP00000049301:0.003158[&&NHX:D=N:T=8030],ENSSTUP00000089299:0.005224[&&NHX:D=N:T=8032]):0.007814[&&NHX:D=N:B=100:T=8028],((ENSOTSP00005006826:0.003553[&&NHX:D=N:T=74940],ENSOKIP00005016504:0.004245[&&NHX:D=N:T=8019]):0.001513[&&NHX:D=N:B=95:T=8016],ENSOMYP00000096229:0.004581[&&NHX:D=N:T=8022]):0.012062[&&NHX:D=N:B=95:T=8016]):0.008081[&&NHX:D=N:B=79:T=504568],ENSHHUP00000013710:0.009428[&&NHX:D=N:T=62062]):0.220475[&&NHX:D=N:B=79:T=504568]):0.063675[&&NHX:D=N:B=0:T=1489388],((((ENSPNAP00000002089:0.088107[&&NHX:D=N:T=42514],ENSAMXP00000037719:0.141689[&&NHX:D=N:T=7994]):0.040456[&&NHX:D=N:B=100:T=1489739],ENSEEEP00000018632:0.175328[&&NHX:D=N:T=8005]):0.011488[&&NHX:D=N:B=52:T=186628],ENSIPUP00000019387:0.191507[&&NHX:D=N:T=7998]):0.130849[&&NHX:D=N:B=52:T=186628],((((ENSCCRP00000004504:0.013011[&&NHX:D=N:T=7962],ENSSGRP00000031158:0.015922[&&NHX:D=N:T=75366]):0.000854[&&NHX:D=N:B=100:T=2743694],ENSCARP00000056251:0.028035[&&NHX:D=N:T=7957]):0.0219[&&NHX:D=N:B=100:T=2743694],ENSSGRP00000071274:0.037074[&&NHX:D=N:T=75366]):0.035154[&&NHX:D=Y:B=100:T=2743694],ENSDARP00000099674:0.101043[&&NHX:D=N:T=7955]):0.247776[&&NHX:D=N:B=100:T=30727]):0.127786[&&NHX:D=N:B=98:T=186626]):0.062612[&&NHX:D=N:B=25:T=186625],(ENSPKIP00000013632:0.279788[&&NHX:D=N:T=1676925],ENSSFOP00015002218:0.291858[&&NHX:D=N:T=113540]):0.102594[&&NHX:D=N:B=88:T=41712]):0.110179[&&NHX:D=N:B=0:T=1489341],ENSLOCP00000009962:0.210021[&&NHX:D=N:T=7918]):0.138094[&&NHX:D=N:B=2:T=41665],ENSECRP00000005112:0.560007[&&NHX:D=N:T=27687]):0.12002[&&NHX:D=N:B=55:T=7898]):0.072614[&&NHX:D=N:B=3:T=117571],ENSCMIP00000046776:0.395803[&&NHX:D=N:T=7868]):0.1[&&NHX:D=N:B=4:T=7776],ENSEBUP00000009898:0.958294[&&NHX:D=N:T=7764]):0.1[&&NHX:D=N:B=0:T=7742];\",\n            \"nhx2\" : \"((((POP23a_CIOIN_ENSCING00000016202,POP23b_CIOIN_ENSCING00000016169)[&&NHX:Ev=duplication],POP23_CIOSA_ENSCSAVG00000000248),((POP23a_BRAFL_C3ZMF1,POP23b_BRAFL_121417)[&&NHX:Ev=duplication],(((POP3_ORYLA_ENSORLG00000019669,POP3_GASAC_ENSGACG00000014023,POP3_DANRE_Q6JWW1),(POP3_XENTR_B1H1F6,(POP3_CHICK_Q9DG25,(POP3_ORNAN_ENSOANG00000004179,POP3_MONDO_ENSMODG00000018033,((POP3_MOUSE_Q9ES81,POP3_RAT_Q3BCU3),POP3_RABIT_ENSOCUG00000025973,POP3_MACMU_ENSMMUG00000014473,POP3_HUMAN_Q9HBV1))))),(((POP2_GASAC_ENSGACG00000001420,POP2_ORYLA_ENSORLG00000008627,POP2_TAKRU_ENSTRUG00000015933),POP2_DANRE_ENSDARG00000069922),POP2_XENTR_ENSXETG00000018064,(((POP2_TAEGU_ENSTGUG00000013383,POP2_CHICK_Q6T9Z5),POP2_ANOCA_ENSACAG00000003557),((POP2_MACEU_ENSMEUG00000015825,POP2_MONDO_ENSMODG00000018205),((POP2_RABIT_ENSOCUG00000009515,(POP2_RAT_Q6P722,POP2_MOUSE_Q9ES82)),(POP2_MACMU_ENSMMUG00000000905,POP2_HUMAN_Q9HBU9))))))[&&NHX:Ev=duplication])),((POP1_CIOSA_ENSCSAVG00000000247,POP1_CIOIN_ENSCING00000000496),((POP1_DANRE_Q5PQZ7,(POP1_ORYLA_ENSORLG00000019663,POP1_GASAC_ENSGACG00000014015,POP1_TAKRU_ENSORLG00000019663)),(POP1_XENTR_B1H1G2,(POP1_ANOCA_ENSACAG00000003910,(POP1_TAEGU_ENSTGUG00000012218,POP1_CHICK_Q9DG23)),POP1_ORNAN_ENSOANG00000004180,POP1_MONDO_ENSMODG00000018034,(POP1_RABIT_ENSOCUG00000016944,(POP1_RAT_Q3BCU4,POP1_MOUSE_Q9ES83),(POP1_HUMAN_Q8NE79,POP1_MACMU_ENSMMUG00000014471))))))[&&NHX:Ev=duplication];\",\n            \"rokas\" : \"(Schizosaccharomyces pombe:0.545914,(Saitoella complicata:0.57412,((Arthrobotrys oligospora:0.539923,((Parastagonospora nodorum:0.465825,(Xylona heveae:0.272728,(Coccidioides immitis:0.254443,Aspergillus nidulans:0.266048)1:0.18207)1:0.041547)1:0.0419986,((Botrytis cinerea:0.0493876,Sclerotinia sclerotiorum:0.0433921)1:0.237364,(Neurospora crassa:0.27673,Fusarium graminearum:0.291175)1:0.153952)1:0.127477)1:0.210957)1:0.198261,(((Lipomyces suomiensis NRRL Y-17356:0.234623,Lipomyces oligophaga NRRL Y-17247:0.370846)1:0.0775974,((Lipomyces japonicus NRRL Y-17848:0.3372,Lipomyces lipofer NRRL Y-11555:0.166258)1:0.0562401,(Lipomyces doorenjongii NRRL Y-27504:0.289327,(Lipomyces kononenkoae NRRL Y-11553:0.0897564,(Lipomyces starkeyi NRRL Y-11557:0.0198789,(Lipomyces mesembrius NRRL Y-27506:0.0193032,Lipomyces arxii NRRL Y-17921:0.0198748)1:0.00839469)1:0.0452686)1:0.113493)1:0.0365204)1:0.0522388)1:0.351588,(((Trigonopsis vinaria NRRL Y-5715:0.32117,Trigonopsis variabilis NRRL Y-1579:0.36434)1:0.434566,(Botryozyma nematodophila NRRL Y-17705:0.702864,(Tortispora starmeri NRRL Y-63665:0.502464,(Tortispora caseinolytica NRRL Y-17796:0.0396928,Tortispora ganteri NRRL Y-17035:0.0458542)1:0.458583)1:0.374135)1:0.158759)1:0.0771598,((((Nadsonia fulvescens var. elongata DSM 6958:0.0202083,Nadsonia fulvescens NRRL Y-12810:0.0176171)1:0.536297,(Candida hispaniensis NRRL Y-5580:0.422522,(Yarrowia bubula NRRL Y-63668:0.0502129,(Yarrowia keelungensis JCM 14894:0.0300806,(Yarrowia lipolytica:0.0264517,(Yarrowia divulgata NRRL Y-63741:0.00987236,Yarrowia deformans JCM 1694:0.0108765)1:0.0239202)1:0.00862142)1:0.0258247)1:0.296485)1:0.408355)1:0.0777756,((Middelhovenomyces tepae NRRL Y-17670:0.443049,((Saprochaete clavata:0.309611,Magnusiomyces tetrasperma NRRL Y-7288:0.34292)1:0.186613,(Galactomyces candidus Phaff 72-186:0.207517,(Dipodascus geniculatus NRRL Y-17628:0.0852517,Dipodascus albidus NRRL Y-12859:0.0862487)1:0.229904)1:0.189193)1:0.149192)1:0.0518788,(((Deakozyma indianensis NRRL YB-1937:0.184702,Candida incommunis NRRL Y-17085:0.20747)1:0.543275,((Wickerhamiella infanticola DS02:0.528425,Wickerhamiella cacticola NRRL Y-27362:0.692381)1:0.075832,(Wickerhamiella versatilis JCM 5958:0.645274,(Wickerhamiella domercqiae:0.626221,(Candida apicola NRRL Y-50540:0.434359,Starmerella bombicola JCM 9596:0.383847)1:0.356841)1:0.0846685)1:0.155283)1:0.413088)1:0.0954418,(((Sugiyamaella lignohabitans CBS 10342:0.411366,(Diddensiella caesifluorescens NRRL Y-48781:0.336519,Spencermartinsiella europaea NRRL Y-48265:0.41893)1:0.0421993)1:0.0384646,(Groenewaldozyma salmanticensis NRRL Y-17090:0.561259,(Zygoascus meyerae NRRL Y-17319:0.366231,Zygoascus ofunaensis NRRL Y-10998:0.397239)1:0.214422)1:0.0535895)1:0.0458319,(Blastobotrys muscicola NRRL Y-7993:0.458918,((Blastobotrys mokoenaii NRRL Y-27120:0.362928,(Blastobotrys proliferans NRRL Y-17577:0.228429,Blastobotrys nivea NRRL Y-17581:0.269851)1:0.158495)1:0.079695,(Blastobotrys serpentis NRRL Y-48249:0.327946,((Blastobotrys raffinosifermentans:0.0217085,Blastobotrys adeninivorans:0.018147)1:0.222596,(Blastobotrys peoriensis NRRL YB-2290:0.169572,Blastobotrys americana NRRL Y-6844:0.161305)1:0.170868)1:0.173794)1:0.0621326)1:0.0484003)1:0.062313)1:0.0537951)1:0.0469088)1:0.0867807)1:0.0634323,((Alloascoidea hylecoeti JCM 7604:0.573891,(Sporopachydermia lactativora NRRL Y-11591:0.293628,Sporopachydermia quercuum JCM 9486:0.229415)1:0.463025)1:0.0601744,((((Ascoidea asiatica JCM 7603:0.367013,Ascoidea rubescens:0.321961)1:0.263464,(Saccharomycopsis capsularis NRRL Y-17639:0.190582,Saccharomycopsis malanga JCM 7620:0.198358)1:0.40498)1:0.163324,((Candida ponderosae NRRL YB-2307:0.38206,((Starmera quercuum NRRL YB-4281:0.250343,(Starmera amethionina NRRL Y-10978:0.208149,Candida stellimalicola NRRL Y-17912:0.200412)1:0.200109)1:0.0953975,((Wickerhamomyces ciferrii NRRL Y-1031:0.190972,Wickerhamomyces anomalus:0.135192)1:0.110022,((Wickerhamomyces hampshirensis NRRL YB-4128:0.251418,(Candida freyschussii:0.200517,((Cyberlindnera xylosilytica NRRL YB-2097:0.171593,(Cyberlindnera fabianii JCM 3601:0.173452,(Cyberlindnera petersonii NRRL YB-3808:0.146495,(Cyberlindnera americana NRRL Y-2156:0.124404,Candida mycetangii NRRL Y-6843:0.138201)1:0.021936)1:0.0555066)1:0.0255677)1:0.104307,((Cyberlindnera mrakii NRRL Y-1364:0.0362246,(Cyberlindnera saturnus NRRL Y-17396:0.0192395,Cyberlindnera suaveolens NRRL Y-17391:0.0161438)1:0.0136523)1:0.121465,((Cyberlindnera jadinii NRRL Y-1542:0.216631,Candida vartiovaarae:0.174307)1:0.0287187,(Cyberlindnera maclurae NRRL Y-5377:0.0723855,Cyberlindnera misumaiensis NRRL Y-17389:0.0590068)1:0.157678)1:0.0254444)1:0.128382)1:0.0244259)1:0.0399877)1:0.0690847,((Wickerhamomyces alni NRRL Y-11625:0.198181,(Wickerhamomyces canadensis NRRL Y-1888:0.0181265,Wickerhamomyces sp.:0.0258553)1:0.152098)1:0.104484,(Wickerhamomyces bovis NRRL YB-4184:0.238507,((Barnettozyma hawaiiensis NRRL Y-27270:0.0769162,(Barnettozyma californica NRRL Y-17395:0.0637227,Barnettozyma populi NRRL Y-12728:0.069715)1:0.012496)1:0.171001,((Barnettozyma pratensis NRRL Y-12696:0.134345,Barnettozyma salicaria NRRL Y-6780:0.201535)1:0.0253729,(Candida montana NRRL Y-17326:0.18273,((Phaffomyces thermotolerans NRRL Y-11709:0.0347558,Candida orba NRRL Y-27336:0.0268361)1:0.0450689,(Phaffomyces opuntiae NRRL Y-11707:0.0227806,Phaffomyces antillensis NRRL Y-12881:0.0381186)1:0.0503677)1:0.136412)1:0.0550969)1:0.0252933)1:0.148508)1:0.0456798)1:0.0515684)1:0.0559147)1:0.0396837)1:0.0394501)1:0.188948,(((Hanseniaspora osmophila NRRL Y-1613:0.0533805,Hanseniaspora vineae:0.0482455)1:0.375889,((Hanseniaspora singularis:0.230831,Hanseniaspora valbyensis NRRL Y-1626:0.170847)1:0.0889552,(Kloeckera hatyaiensis:0.149005,(Hanseniaspora pseudoguilliermondii:0.11701,(Hanseniaspora uvarum:0.0603265,Hanseniaspora clermontiae NRRL Y-27515:0.0811774)1:0.037012)1:0.118708)1:0.169466)1:0.805928)1:0.306057,((((Kluyveromyces aestuarii NRRL YB-4510:0.247878,(Kluyveromyces marxianus CBS6556:0.14186,(Kluyveromyces lactis NRRL Y-1140:0.0794227,Kluyveromyces dobzhanskii NRRL Y-1974:0.107991)1:0.0644926)1:0.119991)1:0.234335,((Eremothecium coryli CBS 5749:0.245286,Eremothecium sinecaudum ATCC 58844:0.262753)1:0.0575176,(Eremothecium cymbalariae DBVPG 7215:0.226178,(Eremothecium gossypii ATCC 10895:0.046311,Ashbya aceri:0.0356574)1:0.257241)1:0.0330026)1:0.17076)1:0.0607471,(Lachancea kluyveri:0.221801,((Lachancea fermentati:0.125926,Lachancea cidri:0.116386)1:0.108281,(Lachancea mirantina:0.360697,((Lachancea waltii:0.155994,(Lachancea quebecensis:0.0412753,Lachancea thermotolerans CBS 6340:0.0381374)1:0.122374)1:0.048069,(Lachancea nothofagi:0.125696,(Lachancea dasiensis:0.187333,(Lachancea meyersii CBS 8951:0.0930237,(Lachancea fantastica:0.0613265,Lachancea lanzarotensis CBS 12615:0.0662562)1:0.080869)1:0.0868343)1:0.0232028)1:0.0796876)1:0.11944)1:0.0368276)1:0.0869217)1:0.0544235)1:0.046723,(((Zygosaccharomyces rouxii CBS 732:0.143413,(Zygosaccharomyces kombuchaensis NRRL YB-4811:0.0926322,(Zygosaccharomyces bisporus NRRL Y-12626:0.083556,Zygosaccharomyces bailii:0.0939337)1:0.0304452)1:0.0574531)1:0.176842,((Zygotorulaspora florentina NRRL Y-1560:0.131232,Zygotorulaspora mrakii NRRL Y-12654:0.168677)1:0.11848,(Torulaspora microellipsoides:0.15825,(Torulaspora maleeae CBS 10694:0.172696,(Torulaspora delbrueckii:0.0799621,(Torulaspora franciscae NRRL Y-17532:0.0354865,Torulaspora pretoriensis NRRL Y-17251:0.0343667)1:0.0834631)1:0.0804511)1:0.0953121)1:0.0235795)1:0.0481102)1:0.0871222,(((Tetrapisispora blattae:0.271746,Yueomyces sinensis NRRL Y-17406:0.347888)1:0.216158,(Vanderwaltozyma polyspora:0.261306,(Tetrapisispora iriomotensis NRRL Y-27309:0.150965,(Tetrapisispora phaffii CBS 4417:0.100885,(Tetrapisispora namnaoensis NRRL Y-27982:0.0531639,Tetrapisispora fleetii NRRL Y-27350:0.0682282)1:0.0667913)1:0.0911273)1:0.204252)1:0.0968006)1:0.049682,((((Nakaseomyces bacillisporus CBS 7720:0.318907,_Candida_ castellii CBS 4332:0.44969)1:0.119593,(_Candida_ glabrata CBS 138:0.19376,(_Candida_ bracarensis CBS 10154:0.0791127,(_Candida_ nivariensis CBS 9983:0.0591139,Nakaseomyces delphensis CBS 2170:0.1071)1:0.0282267)1:0.118561)1:0.24292)1:0.043942,((Saccharomyces uvarum:0.01864,Saccharomyces eubayanus:0.0211527)1:0.0363173,(Saccharomyces arboricola:0.0587131,(Saccharomyces kudriavzevii:0.0570128,(Saccharomyces mikatae IFO 1815:0.0529368,(Saccharomyces paradoxus:0.0250749,Saccharomyces cerevisiae S288C:0.0325262)1:0.0191755)1:0.0192692)1:0.00934172)1:0.0155583)1:0.277733)1:0.0304696,((Naumovozyma dairenensis:0.244773,Naumovozyma castellii:0.223994)1:0.116605,(((Kazachstania africana CBS 2517:0.302329,Kazachstania viticola NRRL Y-27206:0.304357)1:0.0420759,((Kazachstania turicensis NRRL Y-48834:0.232443,Kazachstania kunashirensis NRRL Y-27209:0.160829)1:0.120327,(Kazachstania spencerorum NRRL Y-17920:0.238158,Kazachstania rosinii NRRL Y-17919:0.204563)1:0.0374176)1:0.0694195)1:0.0333483,((Kazachstania intestinalis NRRL Y-48847:0.427517,Kazachstania martiniae NRRL Y-409:0.262551)1:0.0379646,((Kazachstania naganishii CBS 8797:0.335856,Kazachstania bromeliacearum NRRL Y-48836:0.198593)1:0.0338563,(Kazachstania taianensis NRRL Y-48846:0.27887,((Kazachstania transvaalensis NRRL Y-17245:0.111612,Kazachstania yakushimaensis NRRL Y-48837:0.0900106)1:0.290831,(Kazachstania siamensis NRRL Y-48842:0.114965,(Kazachstania unispora NRRL Y-1556:0.0645858,(Kazachstania solicola NRRL Y-27207:0.0241196,Kazachstania aerobia NRRL Y-27976:0.0305719)1:0.0678491)1:0.059458)1:0.1733)1:0.0384928)1:0.0508605)1:0.0761265)1:0.0382292)1:0.0669668)1:0.036691)1:0.0374781)1:0.0230192)1:0.115608)1:0.127779)1:0.342113)1:0.0913588)1:0.0347262,(((Pachysolen tannophilus NRRL Y-2460:0.313751,((Peterozyma xylosa NRRL Y-12939:0.0402272,Peterozyma toletana NRRL YB-4247:0.0398928)1:0.321195,(Nakazawaea peltata JCM 9829:0.323069,Nakazawaea holstii NRRL Y-2155:0.206923)1:0.167264)1:0.0471457)1:0.163091,(((Citeromyces siamensis NRRL Y-27975:0.199314,(Citeromyces hawaiiensis NRRL Y-11581:0.0676646,Citeromyces matritensis NRRL Y-2407:0.0674657)1:0.134721)1:0.41892,(Komagataella pastoris:0.0617151,(Komagataella populi NRRL YB-455:0.0093125,Komagataella pseudopastoris NRRL Y-27603:0.00934262)1:0.0520784)1:0.548169)1:0.0572955,(Kuraishia ogatae NRRL Y-48474:0.423004,((Kuraishia capsulata:0.167402,Kuraishia molischiana NRRL Y-27899:0.174477)1:0.340405,(Candida boidinii JCM 9604:0.409104,((Ogataea methylivora NRRL Y-17250:0.262112,(Ogataea ramenticola NRRL YB-1985:0.331126,(Candida succiphila JCM 9445:0.377882,Ogataea naganishii NRRL Y-7654:0.377342)1:0.0486474)1:0.0581327)1:0.0742491,((((Ogataea nitratoaversa NRRL Y-48449:0.140695,Ogataea pilisensis NRRL Y-27598:0.121524)1:0.101152,(Candida arabinofermentans NRRL YB-2248:0.23367,(Ogataea trehalophila NRRL Y-6781:0.0634693,Ogataea methanolica JCM 10240:0.0635138)1:0.143303)1:0.0364214)1:0.0681563,((Ogataea trehaloabstinens NRRL Y-27595:0.240241,Ogataea populi-albae NRRL Y-48632:0.19583)1:0.109824,((Ogataea zsoltii NRRL Y-27601:0.106801,(Ogataea glucozyma NRRL YB-2185:0.125497,(Ogataea henricii NRRL YB-2194:0.0652918,Ogataea pini NRRL Y-11528:0.0832313)1:0.0564285)1:0.0349258)1:0.117879,((Ogataea minuta NRRL Y-411:0.0815234,Ogataea nonfermentans NRRL YB-2203:0.0649159)1:0.0858242,(Ogataea kodamae NRRL Y-17234:0.276318,(Ogataea philodendri NRRL Y-7210:0.16107,(Ogataea polymorpha NCYC 495 leu1.1:0.0237039,Ogataea parapolymorpha:0.0123489)1:0.137202)1:0.0329933)1:0.0274717)1:0.178127)1:0.0484727)1:0.0552351)1:0.0549412,((Ambrosiozyma maleeae NRRL Y-63635:0.258273,((Ambrosiozyma kashinagacola JCM 15019:0.196206,(Ambrosiozyma pseudovanderkliftii NRRL Y-63632:0.103065,Ambrosiozyma vanderkliftii NRRL Y-63633:0.0839667)1:0.0913495)1:0.0409106,(Ambrosiozyma monospora JCM 7599:0.234639,(Ambrosiozyma oregonensis NRRL Y-6106:0.0826625,(Ambrosiozyma philentoma NRRL Y-7523:0.0357081,Ambrosiozyma ambrosiae NRRL Y-7524:0.0705379)1:0.026201)1:0.130669)1:0.03731)1:0.0668046)1:0.117317,((Brettanomyces custersianus NRRL Y-6653:0.31306,(Brettanomyces anomalus:0.0854333,Brettanomyces bruxellensis CBS 2499:0.0907076)1:0.224162)1:0.282927,((Kregervanrija fluxuum NRRL YB-4273:0.0355143,Kregervanrija delftensis NRRL Y-7119:0.0311594)1:0.225534,((Martiniozyma abiesophila NRRL Y-11514:0.320478,((Saturnispora mendoncae NRRL Y-11515:0.161201,Saturnispora silvae NRRL Y-6725:0.331441)1:0.105865,(Saturnispora saitoi NRRL Y-6671:0.0911533,(Saturnispora zaruensis NRRL Y-7008:0.0580631,(Saturnispora dispora NRRL Y-1447:0.031157,(Saturnispora serradocipensis NRRL Y-48717:0.0165811,Saturnispora hagleri NRRL Y-27828:0.0129394)1:0.0233711)1:0.0308985)1:0.0776961)1:0.125167)1:0.181222)1:0.143022,((Candida sorboxylosa JCM 1536:0.372151,Pichia terricola NRRL YB-4310:0.256406)1:0.0700447,(Pichia membranifaciens KS47-1:0.213499,((Pichia heedii NRRL Y-10967:0.130518,Pichia nakasei NRRL Y-7686:0.123153)1:0.187264,((Pichia norvegensis NRRL Y-7687:0.307748,Pichia kudriavzevii:0.274245)1:0.047663,(Pichia occidentalis NRRL Y-7552:0.190823,Pichia exigua NRRL Y-10920:0.216283)1:0.0273444)1:0.0202107)1:0.0282289)1:0.0444849)1:0.151672)1:0.0978808)1:0.150478)1:0.0843851)1:0.0446598)1:0.111139)1:0.0367086)1:0.137306)1:0.0425494)1:0.0600483)1:0.0499527)1:0.103505,(Babjeviella inositovora NRRL Y-12698:0.594547,((Cephaloascus albidus:0.18956,Cephaloascus fragrans:0.210025)1:0.210658,((Candida schatavii NRRL Y-17078:0.29428,(Candida fragi NRRL Y-17910:0.0714581,Kurtzmaniella cleridarum NRRL Y-48386:0.0735961)1:0.306068)1:0.108229,(((Candida athensensis NRRL Y-27644:0.132895,(Meyerozyma guilliermondii ATCC 6260:0.0289919,(Candida carpophila JCM 9396:0.0151985,Meyerozyma caribbica:0.0185042)1:0.0206601)1:0.0934175)1:0.329014,(Candida ascalaphidarum NRRL Y-27908:0.414658,((Candida gorgasii NRRL Y-27707:0.221357,Candida tammaniensis NRRL Y-8257:0.186332)1:0.101116,(Yamadazyma scolyti NRRL Y-5512:0.270025,(Yamadazyma tenuis:0.191175,(Yamadazyma nakazawae NRRL Y-7903:0.0860963,Yamadazyma philogaea NRRL Y-7813:0.119211)1:0.13583)1:0.0698957)1:0.0621763)1:0.179539)1:0.0478873)1:0.0252656,(((Millerozyma acaciae JCM 10732:0.318905,(Debaryomyces maramus NRRL Y-2171:0.126252,(Debaryomyces nepalensis NRRL Y-7108:0.107212,(Debaryomyces hansenii:0.0420625,(Debaryomyces prosopidis NRRL Y-27369:0.0489959,(Debaryomyces subglobosus NRRL Y-6666:0.0269918,Debaryomyces fabryi NRRL Y-17914:0.0215588)1:0.00458487)1:0.0217112)1:0.0474478)1:0.0562497)1:0.0791464)1:0.0717927,((Priceomyces carsonii NRRL YB-4275:0.202197,(Priceomyces medius NRRL Y-7122:0.126528,(Priceomyces haplophilus JCM 1635:0.134127,Priceomyces castillae NRRL Y-7501:0.0664317)1:0.052666)1:0.106057)1:0.170928,(((Wickerhamia fluorescens JCM 1821:0.309207,(Teunomyces gatunensis NRRL Y-48064:0.139302,(Teunomyces cretensis NRRL Y-27777:0.0373482,Teunomyces kruisii NRRL Y-17087:0.0354532)1:0.0674172)1:0.152253)1:0.0395823,((Suhomyces pyralidae NRRL Y-27085:0.207777,(Suhomyces tanzawaensis NRRL Y-17324:0.114461,(Suhomyces canberraensis NRRL YB-2417:0.126395,Suhomyces emberorum NRRL Y-27606:0.157814)1:0.0330656)1:0.074523)1:0.0880461,(Aciculoconidium aculeatum NRRL YB-4298:0.278681,(Kodamaea laetipori NRRL Y-27713:0.166081,(Kodamaea ohmeri NRRL Y-1932:0.120016,Candida restingae NRRL Y-27358:0.122045)1:0.175941)1:0.0561324)1:0.13211)1:0.0306706)1:0.0320665,((Scheffersomyces stipitis:0.162145,Scheffersomyces lignosus JCM 9837:0.141854)1:0.103183,(((Spathaspora hagerdaliae:0.0274865,Spathaspora gorwiae UFMG-CM-Y312:0.0270552)1:0.185213,(Spathaspora passalidarum NRRL Y-27907:0.0756431,(Spathaspora arborariae:0.0863436,Spathaspora girioi:0.103206)1:0.0276678)1:0.158335)1:0.0543878,((Candida corydali NRRL Y-27910:0.321211,(Lodderomyces elongisporus:0.271322,(Candida parapsilosis:0.0662414,Candida orthopsilosis:0.0591273)1:0.173632)1:0.103296)1:0.0375885,((Candida dubliniensis CD36:0.0370067,Candida albicans WO-1:0.0309348)1:0.126495,(Candida tropicalis ATCC 200956 MY1012:0.0573369,Candida sojae GF41:0.0691758)1:0.118022)1:0.0968903)1:0.0675366)1:0.119154)1:0.0332128)1:0.0611332)1:0.0307845)1:0.0194503,(((Hyphopichia homilentoma JCM 1507:0.231014,Hyphopichia burtonii NRRL Y-1933:0.195628)1:0.0539724,(Danielozyma ontarioensis NRRL YB-1246:0.28361,(Candida gotoi NRRL Y-27225:0.0656244,(Hyphopichia heimii NRRL Y-7502:0.0226493,Candida rhagii NRRL Y-2594:0.0238606)1:0.068766)1:0.157449)1:0.0369338)1:0.0713511,((Candida heveicola NRRL Y-48716:0.134205,_Candida_ auris:0.137532)1:0.207365,(Candida oregonensis NRRL Y-5850:0.222047,(((Candida intermedia JCM 1607:0.130323,Candida blattae NRRL Y-27698:0.127583)1:0.100258,(Clavispora lusitaniae:0.147865,Clavispora fructus NRRL Y-17072:0.15848)1:0.137841)1:0.0302907,((Candida wancherniae NRRL Y-48709:0.246543,(Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993:0.172847,Candida golubevii NRRL Y-48707:0.168165)1:0.0922754)1:0.0530619,(Candida hawaiiana:0.166731,(Metschnikowia kipukae UWOPS 00-669.2:0.116121,((Metschnikowia hibisci UWOPS 95-797.2:0.0472722,(Metschnikowia shivogae UWOPS 04-310.1:0.0168883,Metschnikowia aberdeeniae SUB 05-213.1:0.0146631)1:0.0315668)1:0.0981931,((Metschnikowia proteae:0.00747509,Metschnikowia drakensbergensis:0.00548386)1:0.0718813,((Metschnikowia arizonensis UWOPS 99-103.4:0.0768031,(Metschnikowia similis UWOPS 03-133.4:0.0158634,(Metschnikowia dekortorum:0.00848135,Metschnikowia bowlesiae:0.00946469)1:0.00906119)1:0.100881)1:0.019975,((Metschnikowia kamakouana UWOPS 04-112.5:0.0238126,(Metschnikowia hawaiiensis UWOPS 87-2203.2:0.0113058,(Metschnikowia hamakuensis UWOPS 04-199.1:0.0101785,Metschnikowia mauinuiana UWOPS 04-190.1:0.00865049)1:0.00277958)1:0.0283861)1:0.0126143,((Candida ipomoeae UWOPS 10-104.1:0.0100707,Metschnikowia borealis SUB 99-207.1:0.0167867)1:0.00210267,((Metschnikowia lochheadii UWOPS 99-661.1:0.00996666,(Metschnikowia matae var. matae UFMG-CM-Y391A:0.00424069,Metschnikowia matae var. maris UFMG-CM-Y397T:0.00348643)1:0.00958686)1:0.00918633,(Metschnikowia continentalis UWOPS 95-402.1:0.00666829,(Metschnikowia santaceciliae UWOPS 01-517a1:0.00622675,Metschnikowia cerradonensis:0.00638518)1:0.00224705)1:0.00605543)1:0.00228128)1:0.0140057)1:0.0477555)1:0.0216892)1:0.0216014)1:0.0448311)1:0.0790685)1:0.148907)1:0.104645)1:0.0330591)1:0.0346064)1:0.191308)1:0.0501198)1:0.0235663)1:0.0497414)1:0.249136)1:0.0750128)1:0.0732652)1:0.049717)1:0.219066)1:0.165959)1:0.126267)1:0.0731174)1:0.168976)1:0.15046)1:0.545914);\",\n            \"r2t\" : \"(Schizosaccharomyces pombe:0.126204,(Saitoella complicata:0.0885746,((Arthrobotrys oligospora:0.0619566,(((Botrytis cinerea:0.0159599,Sclerotinia sclerotiorum:0.0144928)100:0.0963903,(Fusarium graminearum:0.0510591,(Neurospora crassa:0.0739745,Thermothelomyces heterothallicus:0.0683393)100:0.0362615)100:0.0584987)100:0.0447412,(((Zymoseptoria tritici:0.0711361,Passalora fulva:0.0715012)100:0.0977923,(Curvularia lunata:0.0396482,Parastagonospora nodorum:0.0402995)100:0.0997238)100:0.0445184,(Xylona heveae:0.0827906,(Coccidioides immitis:0.084686,(Aspergillus glaucus:0.0668904,(Aspergillus nidulans:0.0401227,Aspergillus oryzae:0.0447877)100:0.0146822)100:0.0489525)100:0.0540695)100:0.0225032)100:0.0234296)97:0.0417394)100:0.0878736,((Lipomyces japonicus NRRL Y-17848:0.083055,((Lipomyces suomiensis NRRL Y-17356:0.063608,Lipomyces oligophaga NRRL Y-17247:0.0762265)100:0.0217226,(Lipomyces doorenjongii NRRL Y-27504:0.0786482,(Lipomyces lipofer NRRL Y-11555:0.0650201,(Lipomyces kononenkoae NRRL Y-11553:0.0459803,((Lipomyces starkeyi NRRL Y-11557:0.00681505,Lipomyces starkeyi:0.00528117)100:0.0119879,(Lipomyces mesembrius NRRL Y-27506:0.0232923,Lipomyces arxii NRRL Y-17921:0.0349869)100:0.00929258)100:0.0178152)100:0.0224125)100:0.0117255)100:0.0112742)100:0.0161427)100:0.0443967,(((Trigonopsis variabilis NRRL Y-1579:0.0918385,Trigonopsis vinaria NRRL Y-5715:0.0778916)100:0.0634075,(Botryozyma nematodophila NRRL Y-17705:0.126145,(Tortispora starmeri NRRL Y-63665:0.0822969,(Tortispora caseinolytica NRRL Y-17796:0.0293182,Tortispora ganteri NRRL Y-17035:0.0348557)100:0.0511304)100:0.0413347)100:0.0281241)100:0.0197302,(((Middelhovenomyces tepae NRRL Y-17670:0.111319,((Galactomyces candidus Phaff 72-186:0.0669059,(Dipodascus geniculatus NRRL Y-17628:0.0585418,Dipodascus albidus NRRL Y-12859:0.0802071)100:0.032647)100:0.0352005,((Saprochaete clavata:0.0573717,(Magnusiomyces capitatus:0.0225681,Magnusiomyces capitatus:0.00343673)100:0.0266914)100:0.0426538,(Magnusiomyces tetrasperma NRRL Y-7288:0.0909393,(Magnusiomyces ingens:0.00426038,Magnusiomyces ingens:0.00454468)100:0.0594328)100:0.0145665)100:0.037234)100:0.0271195)100:0.0160277,(((Candida incommunis NRRL Y-17085:0.0714356,Deakozyma indianensis NRRL YB-1937:0.0665043)100:0.0862172,((Wickerhamiella infanticola DS02:0.112297,Wickerhamiella cacticola NRRL Y-27362:0.121855)100:0.0593741,(Candida hispaniensis NRRL Y-5580:0.0908408,((Yarrowia sp. JCM 30694:0.00421429,Yarrowia bubula NRRL Y-63668:0.0066085)100:0.0141797,((Yarrowia deformans JCM 1694:0.00474947,Yarrowia divulgata NRRL Y-63741:0.00788674)100:0.00896605,(Yarrowia lipolytica:0.00855678,(Yarrowia sp. JCM 30696:0.00457866,(Yarrowia sp. JCM 30695:0.00109815,Yarrowia keelungensis JCM 14894:0.000746909)100:0.00339822)100:0.00776074)100:0.0030877)100:0.00797457)100:0.0687327)100:0.084079)99:0.0269638)99:0.0226604,(((Groenewaldozyma salmanticensis NRRL Y-17090:0.11507,(Zygoascus ofunaensis NRRL Y-10998:0.0905002,(Zygoascus hellenicus NRRL Y-7136:0.0177705,Zygoascus meyerae NRRL Y-17319:0.033743)100:0.0524429)100:0.0360027)100:0.0174588,((Spencermartinsiella europaea NRRL Y-48265:0.0911582,Diddensiella caesifluorescens NRRL Y-48781:0.0884185)100:0.0161105,(Sugiyamaella valdiviana:0.0815797,(Sugiyamaella americana NRRL YB-2067:0.0856077,Sugiyamaella lignohabitans CBS 10342:0.0351246)100:0.0195916)100:0.0261745)100:0.0136807)100:0.0169933,(Blastobotrys muscicola NRRL Y-7993:0.11487,((Blastobotrys mokoenaii NRRL Y-27120:0.0956722,(Blastobotrys attinorum Y-27639:0.0521706,(Blastobotrys nivea NRRL Y-17581:0.0858854,Blastobotrys proliferans NRRL Y-17577:0.0888617)100:0.0122257)100:0.014012)100:0.0192743,(Blastobotrys serpentis NRRL Y-48249:0.10963,((Blastobotrys americana NRRL Y-6844:0.0632957,Blastobotrys peoriensis NRRL YB-2290:0.056484)100:0.0312416,(Blastobotrys adeninivorans:0.0201089,Blastobotrys raffinosifermentans:0.016445)100:0.0638897)100:0.0369131)100:0.0165191)100:0.0160658)100:0.0187613)100:0.0218206)99:0.0218424)99:0.0323467,((Nadsonia fulvescens NRRL Y-12810:0.0431276,Nadsonia fulvescens var. elongata DSM 6958:0.0290928)100:0.100074,((Alloascoidea hylecoeti JCM 7604:0.142779,(Sporopachydermia lactativora NRRL Y-11591:0.0716173,Sporopachydermia quercuum JCM 9486:0.060207)100:0.0533148)77:0.0184655,(((Ascoidea asiatica JCM 7603:0.0909876,Ascoidea rubescens:0.0923764)100:0.0555868,(Saccharomycopsis fermentans NRRL Y-17710:0.0670507,(Saccharomycopsis malanga JCM 7620:0.0537866,Saccharomycopsis capsularis NRRL Y-17639:0.0726377)100:0.0293327)100:0.0505221)100:0.0351169,((((Candida ponderosae NRRL YB-2307:0.116821,(Starmera quercuum NRRL YB-4281:0.0867524,(Candida stellimalicola NRRL Y-17912:0.0710683,Starmera amethionina NRRL Y-10978:0.0660149)100:0.038032)100:0.024918)91:0.0146313,((Wickerhamomyces anomalus:0.0497049,Wickerhamomyces ciferrii NRRL Y-1031:0.0512548)100:0.0264792,(((Wickerhamomyces alni NRRL Y-11625:0.0754478,(Wickerhamiella azyma NRRL Y-17067:0.0310146,Wickerhamomyces canadensis NRRL Y-1888:0.0326725)100:0.0453877)100:0.0288606,(Wickerhamomyces bovis NRRL YB-4184:0.083978,((Barnettozyma hawaiiensis NRRL Y-27270:0.0506112,(Barnettozyma populi NRRL Y-12728:0.0521714,Barnettozyma californica NRRL Y-17395:0.0407995)100:0.00921085)100:0.0371517,((Barnettozyma pratensis NRRL Y-12696:0.0622423,Barnettozyma salicaria NRRL Y-6780:0.069559)100:0.0123131,(Candida montana NRRL Y-17326:0.0751889,((Candida orba NRRL Y-27336:0.0339559,Phaffomyces thermotolerans NRRL Y-11709:0.0339438)100:0.0210789,(Phaffomyces antillensis NRRL Y-12881:0.0392326,Phaffomyces opuntiae NRRL Y-11707:0.0320823)100:0.0209823)100:0.0419267)100:0.0220956)100:0.0105821)100:0.0313017)100:0.0153705)100:0.0180182,((Wickerhamomyces hampshirensis NRRL YB-4128:0.0842166,Candida freyschussii:0.0702627)100:0.0145882,(((Cyberlindnera xylosilytica NRRL YB-2097:0.0615196,Cyberlindnera fabianii JCM 3601:0.0530417)100:0.011541,(Cyberlindnera petersonii NRRL YB-3808:0.0626946,(Candida mycetangii NRRL Y-6843:0.0582128,Cyberlindnera americana NRRL Y-2156:0.0598929)100:0.0114685)100:0.0159979)100:0.0264469,((Cyberlindnera maclurae NRRL Y-5377:0.0526604,Cyberlindnera misumaiensis NRRL Y-17389:0.0442506)100:0.0440499,(Cyberlindnera jadinii NRRL Y-1542:0.0725383,(Candida vartiovaarae:0.0625927,(Cyberlindnera mrakii NRRL Y-1364:0.0367754,(Cyberlindnera saturnus NRRL Y-17396:0.0287399,Cyberlindnera suaveolens NRRL Y-17391:0.0232996)100:0.0160669)100:0.0292767)100:0.0102841)100:0.0092162)100:0.0263359)100:0.0154825)100:0.0219838)100:0.0164339)95:0.0119649)100:0.0468189,((Saccharomycodes ludwigii UTAD17:0.114355,((Hanseniaspora vineae:0.0341913,Hanseniaspora osmophila NRRL Y-1613:0.0381317)100:0.0685352,((Hanseniaspora singularis:0.0663886,Hanseniaspora valbyensis NRRL Y-1626:0.0517474)100:0.0155812,(Kloeckera hatyaiensis:0.0523116,(Hanseniaspora pseudoguilliermondii:0.0562921,(Hanseniaspora uvarum:0.0346921,Hanseniaspora clermontiae NRRL Y-27515:0.0475276)100:0.0145255)100:0.0211695)100:0.0279143)100:0.114557)100:0.0384264)100:0.0348094,(((((Eremothecium cymbalariae DBVPG 7215:0.0482528,Eremothecium gossypii ATCC 10895:0.0869488)100:0.0173328,(Eremothecium sinecaudum ATCC 58844:0.0547745,Eremothecium coryli CBS 5749:0.0443996)55:0.00927931)100:0.0479904,(Kluyveromyces aestuarii NRRL YB-4510:0.0661155,(Kluyveromyces marxianus CBS6556:0.0381194,(Kluyveromyces dobzhanskii NRRL Y-1974:0.0402393,Kluyveromyces lactis NRRL Y-1140:0.0242856)100:0.0197354)100:0.0335599)100:0.051824)100:0.0229944,(Lachancea kluyveri:0.0625351,((Lachancea cidri:0.185105,Lachancea mirantina:0.119783)99:0.0288772,((Lachancea dasiensis:0.1214,(Lachancea waltii:0.00819208,(Lachancea meyersii CBS 8951:0.183661,Lachancea nothofagi:0.158248)92:0.0175256)35:0.000265047)81:0.0265036,(Lachancea lanzarotensis CBS 12615:0.0483696,(Lachancea quebecensis:0.0129892,(Lachancea thermotolerans CBS 6340:0.00142213,Lachancea thermotolerans:0.00168073)100:0.00945148)100:0.0453357)95:0.0251145)61:0.0240587)100:0.0154712)100:0.0115994)100:0.0190621,((((Zygosaccharomyces kombuchaensis NRRL YB-4811:0.046758,(Zygosaccharomyces bisporus NRRL Y-12626:0.0360355,Zygosaccharomyces bailii:0.0398601)100:0.0121151)100:0.0202831,(Zygosaccharomyces sapae:0.0121896,(Zygosaccharomyces rouxii v1:0.00340107,Zygosaccharomyces rouxii:0.00320738)100:0.00810975)100:0.0509075)100:0.0714314,((Torulaspora microellipsoides:0.0475723,(Zygotorulaspora florentina NRRL Y-1560:0.0483917,Zygotorulaspora mrakii NRRL Y-12654:0.055265)100:0.0283279)99:0.00902968,(Torulaspora maleeae CBS 10694:0.052034,(Torulaspora delbrueckii:0.0233883,(Torulaspora franciscae NRRL Y-17532:0.0262398,Torulaspora pretoriensis NRRL Y-17251:0.0244877)100:0.0186046)100:0.018761)100:0.0240214)100:0.0161415)100:0.0295256,(((Tetrapisispora blattae:0.0525052,Yueomyces sinensis NRRL Y-17406:0.099179)100:0.0421829,(Vanderwaltozyma polyspora:0.0729678,(Tetrapisispora iriomotensis NRRL Y-27309:0.0560405,(Tetrapisispora phaffii CBS 4417:0.0338951,(Tetrapisispora fleetii NRRL Y-27350:0.0348304,Tetrapisispora namnaoensis NRRL Y-27982:0.0327815)100:0.0179)100:0.0198241)100:0.048753)100:0.0314575)100:0.0246669,((Naumovozyma castellii:0.0505552,(((Kazachstania africana CBS 2517:0.0646844,(Kazachstania viticola NRRL Y-27206:0.0759366,Kazachstania martiniae NRRL Y-409:0.0521419)100:0.0130001)97:0.0077118,((Kazachstania rosinii NRRL Y-17919:0.0596281,Kazachstania spencerorum NRRL Y-17920:0.0768462)100:0.0126981,(Kazachstania turicensis NRRL Y-48834:0.0431203,Kazachstania kunashirensis NRRL Y-27209:0.0559373)100:0.0293573)100:0.0207873)97:0.0114597,(Kazachstania intestinalis NRRL Y-48847:0.0833165,(Kazachstania bromeliacearum NRRL Y-48836:0.079683,((Kazachstania taianensis NRRL Y-48846:0.078128,Kazachstania naganishii CBS 8797:0.0939904)100:0.0218932,((Kazachstania yakushimaensis NRRL Y-48837:0.0243461,Kazachstania transvaalensis NRRL Y-17245:0.0430026)100:0.0585229,(Kazachstania siamensis NRRL Y-48842:0.0457349,(Kazachstania unispora NRRL Y-1556:0.0380544,(Kazachstania solicola NRRL Y-27207:0.0275766,Kazachstania aerobia NRRL Y-27976:0.0259698)100:0.024771)100:0.0190303)100:0.0346524)100:0.0155365)100:0.010997)100:0.0149155)97:0.0121949)100:0.0163685)100:0.0115806,(((Nakaseomyces bacillisporus CBS 7720:0.0602697,_Candida_ castellii CBS 4332:0.0552284)100:0.0196278,(_Candida_ glabrata CBS 138:0.0400934,(_Candida_ bracarensis CBS 10154:0.0249734,(_Candida_ nivariensis CBS 9983:0.0220311,Nakaseomyces delphensis CBS 2170:0.029392)100:0.00532474)100:0.016744)100:0.0575278)100:0.0195602,(Lachancea fermentati:0.180518,(((Saccharomyces bayanus NBRC1948:0.00599558,(Saccharomyces eubayanus:0.0311309,(Saccharomyces pastorianus CBS 1503:0.0081642,Saccharomyces pastorianus CBS 1513:0.0041158)100:0.00354016)100:0.00386148)100:0.0060333,(Candida norvegica:0.0339226,(Saccharomyces bayanus CBS 7001:0.0182511,(Saccharomyces bayanus 623-6C CBS 7001:0.00237523,Saccharomyces uvarum:0.00363307)100:0.00208439)100:0.00457913)100:0.00367531)100:0.0171416,(Saccharomyces arboricola:0.0257175,(Saccharomyces kudriavzevii:0.0231824,((Saccharomyces jurei:0.00897546,(Saccharomyces mikatae IFO 1815:0.00132382,Saccharomyces mikatae:0.00400149)100:0.00689138)100:0.0136218,(Saccharomyces cerevisiae x Saccharomyces kudriavzevii x Saccharomyces uvarum CBS 2834:0.00682362,(Saccharomyces cerevisiae x Saccharomyces kudriavzevii:0.00517659,((Saccharomyces cerevisiae x Saccharomyces eubayanus Hybrid H1:0.00776694,(Saccharomyces pastorianus VTT A-63015:0.00325668,Saccharomyces pastorianus Weihenstephan 34/70:0.0116326)100:0.00241464)100:0.0019361,((Saccharomyces cerevisiae Vin13:0.00163674,((Saccharomyces cerevisiae x Saccharomyces mikatae:0.00797371,(Saccharomyces cerevisiae FostersO:0.00307742,(Saccharomyces paradoxus:0.0129436,Saccharomyces cerevisiae x Saccharomyces paradoxus DBVPG1373xZ1:0.00341844)100:0.00492533)99:0.00226386)88:0.000728143,(Ogataea polymorpha RB11:0.000245516,((Candida tropicalis CBS 94:0.000399229,Ogataea polymorpha CBS 4732:0.000452355)100:0.000174036,((Zygosaccharomyces rouxii CBS 732:0.000356679,Lachancea thermotolerans CBS 6340:0.000527001)87:0.000158257,(Millerozyma farinosa CBS 7064:0.000250795,(Kluyveromyces marxianus CBS 712:0.000321026,(Saccharomyces cerevisiae S288C:0.000481844,Saccharomyces cerevisiae AWRI796:0.00294417)100:0.000752871)98:0.000129624)100:0.000812457)79:6.41111e-05)78:0.000115355)100:0.00113339)88:0.000426612)88:0.000745475,(Candida gropengiesseri:0.00398597,(Candida batistae:0.00191938,((Wickerhamiella domercqiae:0.0731683,Wickerhamiella versatilis JCM 5958:0.0917899)100:0.0201985,((Candida stellata:0.0447414,(Candida davenportii:0.0883913,Starmerella bacillaris NP2:0.0706162)100:0.0389893)100:0.0266105,((Starmerella bombicola JCM 9596:0.085771,(Candida bombi:0.0676886,Candida apicola NRRL Y-50540:0.0505998)100:0.0206182)100:0.0320175,(Candida geochares:0.0607001,(Candida sorbosivorans:0.0414339,(Wickerhamiella galacta:0.00713286,Candida magnoliae:0.0215597)100:0.016667)100:0.00941328)100:0.0286677)100:0.0198253)100:0.0223772)100:0.106092)100:0.00330585)100:0.00340044)88:0.000881557)94:0.0026942)94:0.00647231)94:0.00702113)100:0.00371471)100:0.00556456)100:0.00752715)100:0.0530619)100:0.0292997)100:0.015258)100:0.0168147)100:0.0146565)100:0.0355872)100:0.027864)100:0.102054)100:0.0402833,(((Pachysolen tannophilus NRRL Y-2460:0.0808212,((Peterozyma xylosa NRRL Y-12939:0.0413235,Peterozyma toletana NRRL YB-4247:0.0363934)100:0.079557,(Nakazawaea peltata JCM 9829:0.0790579,(Nakazawaea holstii NRRL Y-2155:0.076221,Nakazawaea wickerhamii NRRL Y-2563:0.0830923)100:0.0236035)100:0.0313818)100:0.0167062)100:0.0309597,(((Citeromyces siamensis NRRL Y-27975:0.0596415,(Citeromyces hawaiiensis NRRL Y-11581:0.0404304,Citeromyces matritensis NRRL Y-2407:0.0405154)100:0.0300409)100:0.0722959,((Komagataella populi NRRL YB-455:0.00452192,Komagataella pseudopastoris NRRL Y-27603:0.00450592)100:0.0174026,(Komagataella pastoris:0.00889631,(Komagataella phaffii:0.000148318,(Komagataella phaffii GS115:4.69073e-05,Komagataella phaffii:0.000106001)100:7.7985e-05)100:0.00811704)100:0.0144677)100:0.140854)100:0.0285972,((Kuraishia ogatae NRRL Y-48474:0.0914258,(Kuraishia molischiana NRRL Y-27899:0.0581477,Kuraishia capsulata:0.0467181)100:0.0478643)100:0.0195164,(Candida boidinii JCM 9604:0.110969,(((Candida succiphila JCM 9445:0.0886966,Ogataea naganishii NRRL Y-7654:0.0959386)100:0.0167412,(Ogataea methylivora NRRL Y-17250:0.0855903,Ogataea ramenticola NRRL YB-1985:0.0987928)100:0.0178331)100:0.0227408,((((Ogataea pilisensis NRRL Y-27598:0.066275,Ogataea nitratoaversa NRRL Y-48449:0.0642773)100:0.028961,(Candida arabinofermentans NRRL YB-2248:0.0849656,(Ogataea trehalophila NRRL Y-6781:0.0487782,Ogataea methanolica JCM 10240:0.0493589)100:0.0293327)100:0.0140467)100:0.0279201,(Ogataea trehaloabstinens NRRL Y-27595:0.099808,((Ogataea zsoltii NRRL Y-27601:0.0533496,(Ogataea glucozyma NRRL YB-2185:0.0502725,(Ogataea henricii NRRL YB-2194:0.0474431,(Ogataea pini NRRL Y-11528:0.000173811,Ogataea populi-albae NRRL Y-48632:0.000238677)100:0.0473245)100:0.0117949)100:0.010016)100:0.0313845,((Ogataea nonfermentans NRRL YB-2203:0.0463412,Ogataea minuta NRRL Y-411:0.0528823)100:0.0269107,(Ogataea philodendri NRRL Y-7210:0.0685447,(Ogataea kodamae NRRL Y-17234:0.0684285,(Ogataea parapolymorpha:0.019301,(Ogataea angusta:0.00598477,Ogataea polymorpha NCYC 495 leu1.1:0.000116775)100:0.00806111)100:0.0330794)100:0.0111215)100:0.0117704)100:0.0279163)100:0.0145388)100:0.0167219)100:0.0177219,((Ambrosiozyma maleeae NRRL Y-63635:0.0833518,((Ambrosiozyma kashinagacola JCM 15019:0.0693266,(Ambrosiozyma pseudovanderkliftii NRRL Y-63632:0.0577148,Ambrosiozyma vanderkliftii NRRL Y-63633:0.0566447)100:0.0243184)100:0.0165422,(Ambrosiozyma monospora JCM 7599:0.0768011,(Ambrosiozyma oregonensis NRRL Y-6106:0.0577061,(Ambrosiozyma philentoma NRRL Y-7523:0.0407241,Ambrosiozyma ambrosiae NRRL Y-7524:0.058601)95:0.0150731)100:0.0404117)100:0.0150307)100:0.0199196)100:0.0274069,((Candida sp. JCM 15000:0.0941246,(Brettanomyces custersianus NRRL Y-6653:0.086231,(Brettanomyces anomalus:0.0318015,(Brettanomyces bruxellensis:0.000593528,(Brettanomyces bruxellensis CBS 2499:0.00109505,Brettanomyces bruxellensis:0.00264587)100:0.000384652)100:0.0247517)100:0.0615694)100:0.0521429)100:0.0778521,((Kregervanrija fluxuum NRRL YB-4273:0.0374345,Kregervanrija delftensis NRRL Y-7119:0.0405164)100:0.0638635,((Martiniozyma abiesophila NRRL Y-11514:0.109633,((Saturnispora silvae NRRL Y-6725:0.0831621,Saturnispora mendoncae NRRL Y-11515:0.067902)100:0.0265947,(Saturnispora saitoi NRRL Y-6671:0.0588065,(Saturnispora zaruensis NRRL Y-7008:0.0528894,(Saturnispora dispora NRRL Y-1447:0.0370446,(Saturnispora hagleri NRRL Y-27828:0.0255079,Saturnispora serradocipensis NRRL Y-48717:0.0340521)100:0.0169599)100:0.0125902)100:0.0247621)100:0.0299834)100:0.0367605)100:0.0308369,((Pichia terricola NRRL YB-4310:0.074898,Candida sorboxylosa JCM 1536:0.0758895)100:0.0245451,((Candida californica:0.0648764,(Pichia membranifaciens NRRL Y-2026:0.0243445,Pichia membranifaciens KS47-1:0.0209896)100:0.0311224)59:0.0177483,((Pichia norvegensis NRRL Y-7687:0.0887783,Pichia kudriavzevii:0.082125)100:0.0177134,((Pichia nakasei NRRL Y-7686:0.067107,Pichia heedii NRRL Y-10967:0.0588032)100:0.0369725,(Pichia occidentalis NRRL Y-7552:0.0675481,Pichia exigua NRRL Y-10920:0.0755201)59:0.0151337)59:0.0107938)59:0.0109712)100:0.0124365)100:0.0326334)100:0.0231644)100:0.0331026)100:0.0335554)100:0.0176088)100:0.0289504)99:0.0137276)100:0.034821)100:0.0193198)100:0.0237829)100:0.0278153,(Babjeviella inositovora NRRL Y-12698:0.0830192,((Cephaloascus fragrans:0.0569461,Cephaloascus albidus:0.0718853)100:0.0346833,((Candida schatavii NRRL Y-17078:0.091576,(Candida fragi NRRL Y-17910:0.0453009,Kurtzmaniella cleridarum NRRL Y-48386:0.0568199)100:0.0648921)100:0.0253452,((((Candida ascalaphidarum NRRL Y-27908:0.098612,Diutina catenulata:0.148142)95:0.0200365,(Candida athensensis NRRL Y-27644:0.0392514,((Meyerozyma guilliermondii:0.000908622,Meyerozyma guilliermondii ATCC 6260:0.00309795)100:0.0101255,(Meyerozyma caribbica:0.009389,Candida carpophila JCM 9396:0.00717367)100:0.00816186)100:0.0269725)100:0.0762289)92:0.0167428,((Candida tammaniensis NRRL Y-8257:0.0674796,Candida gorgasii NRRL Y-27707:0.0694565)100:0.0285249,(Yamadazyma scolyti NRRL Y-5512:0.0774375,(Candida aaseri SH-14:0.0654444,((Yamadazyma laniorum yHMH7:0.0417828,Yamadazyma tenuis:0.0402424)100:0.0282539,(Yamadazyma nakazawae NRRL Y-7903:0.0408872,Yamadazyma philogaea NRRL Y-7813:0.0504395)100:0.0356588)100:0.0194215)100:0.0124815)100:0.0205036)100:0.0585866)77:0.0121471,(((Priceomyces carsonii NRRL YB-4275:0.0773801,(Priceomyces medius NRRL Y-7122:0.0599315,(Priceomyces castillae NRRL Y-7501:0.0479101,Priceomyces haplophilus JCM 1635:0.0517119)100:0.0177603)100:0.0293383)100:0.0429337,(Millerozyma acaciae JCM 10732:0.0740945,(Debaryomyces maramus NRRL Y-2171:0.0742901,((Debaryomyces hansenii:0.0094309,Debaryomyces tyrocola:0.00741868)100:0.0123071,(Debaryomyces fabryi NRRL Y-17914:0.0115779,(Debaryomyces hansenii J6:0.00478424,(Debaryomyces subglobosus NRRL Y-6666:0.00307223,(Debaryomyces prosopidis NRRL Y-27369:0.0266364,Debaryomyces nepalensis NRRL Y-7108:0.0590941)100:0.0214071)100:0.0162527)100:0.0127128)100:0.00837282)100:0.0302908)100:0.0281444)100:0.0204554)98:0.014532,((((Wickerhamia fluorescens JCM 1821:0.0804346,(Teunomyces gatunensis NRRL Y-48064:0.0543253,(Teunomyces kruisii NRRL Y-17087:0.0250798,Teunomyces cretensis NRRL Y-27777:0.0295176)100:0.0240266)100:0.0384231)100:0.0131621,((Aciculoconidium aculeatum NRRL YB-4298:0.0837536,(Kodamaea laetipori NRRL Y-27713:0.0636316,(Kodamaea ohmeri NRRL Y-1932:0.0490485,Candida restingae NRRL Y-27358:0.0479262)100:0.0351338)100:0.0169767)100:0.0342227,(Suhomyces pyralidae NRRL Y-27085:0.0720593,((Suhomyces canberraensis NRRL YB-2417:0.0513793,Suhomyces emberorum NRRL Y-27606:0.0573297)100:0.013494,(Suhomyces tanzawaensis:0.000172874,Suhomyces tanzawaensis NRRL Y-17324:0.000124577)100:0.0429432)100:0.0187886)100:0.0236942)100:0.0114544)100:0.012213,(((Scheffersomyces lignosus JCM 9837:0.0282656,Scheffersomyces shehatae ATY839:0.0176242)100:0.034077,(Scheffersomyces stipitis:0.000518897,Scheffersomyces stipitis NRRL Y-7124:0.00119922)100:0.0475992)100:0.0326218,(((Spathaspora gorwiae UFMG-CM-Y312:0.0172059,Spathaspora sp.:0.017776)100:0.0470127,(Spathaspora arborariae:0.0407776,(Spathaspora sp.:0.0365321,(Spathaspora passalidarum NRRL Y-27907:0.000681504,(Spathaspora passalidarum:0.00100702,Spathaspora passalidarum:0.000326132)100:0.00040554)100:0.0255792)100:0.0120683)100:0.040913)100:0.0204885,((Candida corydali NRRL Y-27910:0.0859408,(Lodderomyces elongisporus:0.0706966,(Candida metapsilosis:0.0259618,(Candida orthopsilosis:0.0216995,Candida parapsilosis:0.0233949)100:0.00841778)100:0.0372902)100:0.0291739)100:0.0147675,((Candida sojae GF41:0.0310027,Candida tropicalis ATCC 200956 MY1012:0.0110004)100:0.0223129,(Candida dubliniensis CD36:0.0709642,(Naumovozyma dairenensis:0.00144647,(Candida albicans WO-1:0.00123288,Candida albicans:0.00103971)100:0.000641177)100:0.0102161)100:0.0290815)100:0.0324332)100:0.0267713)100:0.0394725)95:0.0128346)95:0.02227,(((Hyphopichia homilentoma JCM 1507:0.0587536,Hyphopichia burtonii NRRL Y-1933:0.0713047)100:0.016959,(Danielozyma ontarioensis NRRL YB-1246:0.0873366,(Candida gotoi NRRL Y-27225:0.0455032,(Candida rhagii NRRL Y-2594:0.0222124,Hyphopichia heimii NRRL Y-7502:0.0224423)100:0.0230844)100:0.0392466)100:0.0145792)100:0.0209346,((_Candida_ auris:0.0455892,(Candida heveicola NRRL Y-48716:0.0410977,Candida pseudohaemulonis B12108:0.0394728)100:0.0226688)100:0.0469312,((Candida oregonensis NRRL Y-5850:0.0865896,((Candida intermedia JCM 1607:0.042487,Candida blattae NRRL Y-27698:0.0530799)100:0.0238467,(Clavispora fructus NRRL Y-17072:0.0576833,Clavispora lusitaniae:0.0491396)100:0.0272481)100:0.0102521)96:0.0107527,(Metschnikowia bicuspidata:0.104942,((Candida wancherniae NRRL Y-48709:0.0784867,(Candida golubevii NRRL Y-48707:0.0554815,(Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993:0.0413189,(Metschnikowia fructicola:0.0157945,Metschnikowia fructicola:0.0148367)100:0.0299732)100:0.0118293)100:0.0209009)100:0.0131789,((Metschnikowia drosophilae UWOPS83-1135.3:0.021045,Candida torresii CBS 5152:0.0230134)100:0.0543554,((Metschnikowia orientalis UWOPS99-745.6:0.0433538,Candida hawaiiana:0.0375214)100:0.0152737,(Metschnikowia sp. M2Y3 EBD-CdV M2Y3:0.0331658,((Metschnikowia kipukae UWOPS 00-669.2:0.0297972,(Metschnikowia hibisci UWOPS 95-797.2:0.0265758,(Metschnikowia aberdeeniae SUB 05-213.1:0.0117725,Metschnikowia shivogae UWOPS 04-310.1:0.0110661)100:0.0119074)100:0.015541)58:0.00570717,((Metschnikowia proteae:0.0057267,Metschnikowia drakensbergensis:0.0055943)100:0.0241508,(((Metschnikowia arizonensis UWOPS 99-103.4:0.0370555,Metschnikowia colocasiae UWOPS 03-202.1:0.0171738)93:0.00452229,(Metschnikowia sp. 03-147.1 UWOPS 03-147.1:0.0208946,(Metschnikowia similis UWOPS 03-133.4:0.0111303,(Metschnikowia dekortorum:0.00697665,Metschnikowia bowlesiae:0.00921332)100:0.00571605)100:0.023746)93:0.00417948)100:0.00628612,((Metschnikowia hawaiiensis UWOPS 87-2203.2:0.0301812,Metschnikowia sp. 04-218.3 UWOPS 04-218.3:0.0150044)100:0.0108385,((Metschnikowia lochheadii UWOPS 99-661.1:0.00971309,(Metschnikowia matae var. matae UFMG-CM-Y391A:0.00687815,Metschnikowia matae var. maris UFMG-CM-Y397T:0.00685245)100:0.00661365)100:0.00543424,((Metschnikowia sp. 04-226.1 UWOPS 04-226.1:0.00877917,(Metschnikowia continentalis UWOPS 95-402.1:0.00829922,(Metschnikowia santaceciliae UWOPS 01-517a1:0.00694966,Metschnikowia cerradonensis:0.00643801)100:0.0022256)100:0.00393078)100:0.00346672,((Metschnikowia cubensis MUCL 45751:0.0116299,Metschnikowia sp. 01-655c1 UWOPS 01-655c1:0.010726)100:0.00475537,(Candida ipomoeae UWOPS 10-104.1:0.0120555,(Metschnikowia borealis SUB 99-207.1:0.00434673,Metschnikowia sp. 13-106.1 UWOPS 13-106.1:0.0046889)100:0.0079509)100:0.00239546)100:0.00300571)100:0.00344102)100:0.00898957)100:0.0120361)100:0.00782286)100:0.00621084)58:0.0061066)100:0.0152811)100:0.0320067)56:0.00960016)100:0.0151264)100:0.014359)99:0.0138301)100:0.0445971)100:0.014915)94:0.00905625)92:0.0102603)100:0.0178837)100:0.0562855)100:0.0243772)100:0.0198609)100:0.0259199)57:0.0176658)100:0.0501942)100:0.045588)99:0.0241612)100:0.0456527)100:0.0313927)100:0.0580377)100:0.0449143)1:0.126204);\",\n            \"LRF1\" : \"((((((((((((((((((TP53_AmelENSAMEP00000017825:0.0263[&&NHX:D=N:T=9646],TP53_MpfuENSMPUP00000008945:0.066538[&&NHX:D=N:T=9669])speciation:0.032561[&&NHX:D=N:B=99:T=379584:DD=],TP53_CfamENSCAFP00000024579:0.086484[&&NHX:D=N:T=9615])speciation:0.034068[&&NHX:D=N:B=81:T=379584:DD=],TP53_FcatENSFCAP00000008925:0.06619[&&NHX:D=N:T=9685])speciation:0.025911[&&NHX:D=N:B=31:T=33554:DD=],TP53_EcabENSECAP00000006210:0.04971[&&NHX:D=N:T=9796])speciation:0.01224[&&NHX:D=N:T=314145:B=17:DD=],(((TP53_BtauENSBTAP00000001420:0.043108[&&NHX:D=N:T=9913],TP53_OariENSOARP00000016707:0.049064[&&NHX:D=N:T=9940])speciation:0.055294[&&NHX:D=N:B=98:T=9895:DD=],TP53_TtruENSTTRP00000009721:0.022529[&&NHX:D=N:T=9739])speciation:0.022515[&&NHX:D=N:T=91561:B=39:DD=],TP53_SscrENSSSCP00000019016:0.065797[&&NHX:D=N:T=9823])speciation:0.020972[&&NHX:D=N:T=91561:B=35:DD=])speciation:0.006996[&&NHX:D=N:B=9:T=314145:DD=],TP53_SaraENSSARP00000005616:0.149927[&&NHX:D=N:T=42254])speciation:0.013221[&&NHX:D=N:T=314145:B=7:DD=],TP53_PvamENSPVAP00000015400:0.117578[&&NHX:D=N:T=132908])speciation:0.0[&&NHX:D=N:B=1:T=314145:DD=],((ENSMLUG00000006411_MlucENSMLUP00000005861:0.003702[&&NHX:D=N:T=59463],ENSMLUG00000025140_MlucENSMLUP00000016733:0.12569[&&NHX:D=N:T=59463])duplication:0.131525[&&NHX:D=Y:T=59463:B=100],TP53_EeurENSEEUP00000013295:0.183463[&&NHX:D=N:T=9365])speciation:0.042602[&&NHX:D=N:T=314145:B=33:DD=])duplication:0.018327[&&NHX:DD=Y:T=314145:B=0:D=],(((((Trp53_MmusENSMUSP00000104298:0.002681[&&NHX:D=N:T=10090],Trp53_MsspMGP_SPRETEiJ_P0028933:0.017851[&&NHX:D=N:T=10096])speciation:0.064969[&&NHX:D=N:B=100:T=862507:DD=],Tp53_RnorENSRNOP00000074031:0.079068[&&NHX:D=N:T=10116])speciation:0.12872[&&NHX:D=N:T=39107:B=100:DD=],LOC100910954_RnorENSRNOP00000064177:0.056502[&&NHX:D=N:T=10116])duplication:0.0[&&NHX:D=Y:B=5:T=39107],TP53_OpriENSOPRP00000005906:0.185911[&&NHX:D=N:T=9978])speciation:0.0[&&NHX:D=N:T=314147:B=0:DD=],((((TP53_MmurENSMICP00000039812:0.054544[&&NHX:D=N:T=30608],TP53_OgarENSOGAP00000015106:0.095719[&&NHX:D=N:T=30611])duplication:0.012762[&&NHX:D=N:B=52:T=376911:DD=],((((((TP53_HsapENSP00000269305:0.0[&&NHX:D=N:T=9606],TP53_GgorENSGGOP00000009561:0.002907[&&NHX:D=N:T=9595])speciation:0.001345[&&NHX:D=N:B=61:T=207598:DD=],TP53_PtroENSPTRP00000014836:0.000592[&&NHX:D=N:T=9598])speciation:0.00877[&&NHX:D=N:B=61:T=207598:DD=],TP53_PabeENSPPYP00000008923:0.009552[&&NHX:D=N:T=9601])speciation:4.8e-05[&&NHX:D=N:T=9604:B=100:DD=],TP53_NleuENSNLEP00000011861:0.032229[&&NHX:D=N:T=61853])speciation:0.004444[&&NHX:D=N:T=314295:B=97:DD=],((TP53_PanuENSPANP00000019643:0.007102[&&NHX:D=N:T=9555],TP53_CsabENSCSAP00000007551:0.010543[&&NHX:D=N:T=60711])speciation:0.000953[&&NHX:D=N:B=100:T=9528:DD=],TP53_MmulENSMMUP00000035274:0.043449[&&NHX:D=N:T=9544])speciation:0.019535[&&NHX:D=N:T=9528:B=55:DD=])speciation:0.013822[&&NHX:D=N:T=9526:B=52:DD=],TP53_CjacENSCJAP00000027663:0.047099[&&NHX:D=N:T=9483])speciation:0.027286[&&NHX:D=N:B=57:T=314293:DD=])speciation:0.013265[&&NHX:D=N:T=9443:B=4:DD=],TP53_TbelENSTBEP00000010189:0.222843[&&NHX:D=N:T=37347])speciation:0.008121[&&NHX:D=N:B=0:T=314146:DD=],((TP53_ItriENSSTOP00000019678:0.08339[&&NHX:D=N:T=43179],Tp53_CporENSCPOP00000012841:0.120892[&&NHX:D=N:T=10141])speciation:0.018406[&&NHX:D=N:T=9989:B=42:DD=],(ENSOCUG00000001138_OcunENSOCUP00000000989:0.013142[&&NHX:D=N:T=9986],ENSOCUG00000022109_OcunENSOCUP00000025959:0.090881[&&NHX:D=N:T=9986])duplication:0.069194[&&NHX:D=Y:T=9986:B=97])speciation:0.015339[&&NHX:D=N:T=314147:B=15:DD=])speciation:0.019539[&&NHX:D=N:B=0:T=314146:DD=])duplication:0.026935[&&NHX:DD=Y:T=314146:B=0:D=])speciation:0.017095[&&NHX:D=N:T=1437010:B=0:DD=],(((((((ENSLAFG00000028692_LafrENSLAFP00000023554:0.00886[&&NHX:D=N:T=9785],ENSLAFG00000030880_LafrENSLAFP00000027441:0.052436[&&NHX:D=N:T=9785])duplication:0.006909[&&NHX:D=Y:B=0:T=9785],ENSLAFG00000030555_LafrENSLAFP00000027808:0.044446[&&NHX:D=N:T=9785])duplication:0.003043[&&NHX:D=Y:T=9785:B=0],(ENSLAFG00000028299_LafrENSLAFP00000024998:0.011792[&&NHX:D=N:T=9785],ENSLAFG00000032042_LafrENSLAFP00000023389:0.017693[&&NHX:D=N:T=9785])duplication:0.015904[&&NHX:D=Y:T=9785:B=74])duplication:0.0[&&NHX:D=Y:B=0:T=9785],(((ENSLAFG00000027365_LafrENSLAFP00000025852:0.011873[&&NHX:D=N:T=9785],ENSLAFG00000026238_LafrENSLAFP00000027253:0.026457[&&NHX:D=N:T=9785])duplication:0.019571[&&NHX:D=Y:T=9785:B=81],ENSLAFG00000027669_LafrENSLAFP00000028793:0.027495[&&NHX:D=N:T=9785])duplication:0.016599[&&NHX:D=Y:T=9785:B=70],ENSLAFG00000027820_LafrENSLAFP00000028173:0.058133[&&NHX:D=N:T=9785])duplication:0.031788[&&NHX:D=Y:T=9785:B=87])duplication:0.038135[&&NHX:D=Y:T=9785:B=10],(ENSLAFG00000027348_LafrENSLAFP00000027515:0.028441[&&NHX:D=N:T=9785],ENSLAFG00000027474_LafrENSLAFP00000018379:0.03464[&&NHX:D=N:T=9785])duplication:0.131904[&&NHX:D=Y:B=100:T=9785],ENSLAFG00000007483_LafrENSLAFP00000006292:0.058399[&&NHX:D=N:T=9785])duplication:0.0075[&&NHX:D=Y:T=9785:B=23],TP53_PcapENSPCAP00000011892:0.114307[&&NHX:D=N:T=9813])speciation:0.010282[&&NHX:D=N:T=311790:B=18:DD=],(ENSETEG00000008987_EtelENSETEP00000007296:0.0[&&NHX:D=N:T=9371],ENSETEG00000009984_EtelENSETEP00000008111:0.105253[&&NHX:D=N:T=9371])duplication:0.154739[&&NHX:D=Y:B=100:T=9371])speciation:0.044399[&&NHX:D=N:T=311790:B=35:DD=])speciation:0.041158[&&NHX:D=N:B=0:T=9347:DD=],TP53_DnovENSDNOP00000004075:0.078395[&&NHX:D=N:T=9361])speciation:0.080059[&&NHX:D=N:B=0:T=9347:DD=],((TP53_SharENSSHAP00000018268:0.0496[&&NHX:D=N:T=9305],ENSMODG00000007271_MdomENSMODP00000009014:0.172546[&&NHX:D=N:T=13616])speciation:0.024952[&&NHX:D=N:T=9263:B=83:DD=],ENSMEUG00000013135_MeugENSMEUP00000011978:0.069167[&&NHX:D=N:T=9315])speciation:0.225429[&&NHX:D=N:B=83:T=9263:DD=])speciation:0.228895[&&NHX:D=N:B=81:T=32525:DD=],tp53_XtroENSXETP00000053759:0.483686[&&NHX:D=N:T=8364])speciation:0.095084[&&NHX:D=N:B=55:T=32523:DD=],(TP53_PsinENSPSIP00000014905:0.228951[&&NHX:D=N:T=13735],ENSOANG00000011981_OanaENSOANP00000018980:0.553865[&&NHX:D=N:T=9258])speciation:0.126185[&&NHX:D=N:B=48:T=32524:DD=])duplication:0.03737[&&NHX:DD=Y:B=17:T=32523:D=],TP53_LchaENSLACP00000015915:0.317935[&&NHX:D=N:T=7897])speciation:0.062274[&&NHX:D=N:B=13:T=8287:DD=],(((tp53_DrerENSDARP00000051548:0.365455[&&NHX:D=N:T=7955],tp53_AmexENSAMXP00000021366:0.579505[&&NHX:D=N:T=7994])speciation:0.105036[&&NHX:D=N:B=46:T=186626:DD=],((((((tp53_TrubENSTRUP00000030645:0.158124[&&NHX:D=N:T=31033],tp53_TnigENSTNIP00000013035:0.25403[&&NHX:D=N:T=99883])speciation:0.1396[&&NHX:D=N:T=31031:B=100:DD=],tp53_OlatENSORLP00000008029:0.359414[&&NHX:D=N:T=8090])speciation:0.040022[&&NHX:D=N:T=1489872:B=1:DD=],(tp53_GacuENSGACP00000025614:0.249641[&&NHX:D=N:T=69293],tp53_OnilENSONIP00000023874:0.251831[&&NHX:D=N:T=8128])speciation:0.085834[&&NHX:D=N:T=1489872:B=100:DD=])duplication:0.070104[&&NHX:DD=Y:T=1489872:B=0:D=],(tp53_PforENSPFOP00000007556:0.070709[&&NHX:D=N:T=48698],tp53_XmacENSXMAP00000015753:0.165631[&&NHX:D=N:T=8083])speciation:0.290725[&&NHX:D=N:B=100:T=586240:DD=])duplication:0.058888[&&NHX:DD=Y:B=2:T=1489872:D=],ENSGMOG00000007755_GmorENSGMOP00000008291:0.272843[&&NHX:D=N:T=8049])speciation:0.143728[&&NHX:D=N:T=123368:B=3:DD=],TP531ofmany_AmexENSAMXP00000007265:0.383807[&&NHX:D=N:T=7994])speciation:0.129809[&&NHX:D=N:T=186625:B=41:DD=])duplication:0.079851[&&NHX:D=Y:B=6:T=186625],tp53_LocuENSLOCP00000017063:0.263043[&&NHX:D=N:T=7918])speciation:0.079504[&&NHX:D=N:T=41665:B=5:DD=])speciation:0.205725[&&NHX:D=N:B=10:T=117571:DD=],ENSPMAG00000009535_PmarENSPMAP00000010479:0.363682[&&NHX:D=N:T=7757])speciation:0.005138[&&NHX:D=N:B=0:T=7742:DD=],((((((((((((TP63_MgalENSMGAP00000001036:0.00675[&&NHX:D=N:T=9103],TP63_GgalENSGALP00000032705:0.02786[&&NHX:D=N:T=9031])speciation:0.018196[&&NHX:D=N:B=100:T=9005:DD=],TP63_AplaENSAPLP00000012746:0.025285[&&NHX:D=N:T=8839])speciation:0.020559[&&NHX:D=N:B=100:T=1549675:DD=],(TP63_TgutENSTGUP00000009686:0.018245[&&NHX:D=N:T=59729],TP63_FalbENSFALP00000007718:0.02902[&&NHX:D=N:T=59894])speciation:0.022707[&&NHX:D=N:B=100:T=9126:DD=])speciation:0.046097[&&NHX:D=N:T=8825:B=100:DD=],TP63_PsinENSPSIP00000018044:0.123057[&&NHX:D=N:T=13735])speciation:0.005555[&&NHX:D=N:T=1329799:B=37:DD=],TP63_AcarENSACAP00000000376:0.736631[&&NHX:D=N:T=28377])speciation:0.010123[&&NHX:D=N:B=0:T=32561:DD=],((((((((((Trp63_MmusENSMUSP00000110965:0.000847[&&NHX:D=N:T=10090],Trp63_MsspMGP_SPRETEiJ_P0042982:0.004734[&&NHX:D=N:T=10096])speciation:0.021561[&&NHX:D=N:B=100:T=862507:DD=],Tp63_RnorENSRNOP00000033463:0.030383[&&NHX:D=N:T=10116])speciation:0.048568[&&NHX:D=N:T=39107:B=100:DD=],Trp63_DordENSDORP00000001930:0.044582[&&NHX:D=N:T=10020],TP63_ItriENSSTOP00000012357:0.057295[&&NHX:D=N:T=43179])speciation:0.000474[&&NHX:D=N:T=33553:B=0:DD=],TP63_CporENSCPOP00000013308:0.058396[&&NHX:D=N:T=10141])speciation:0.003336[&&NHX:D=N:B=0:T=9989:DD=],TP63_OpriENSOPRP00000002632:0.076764[&&NHX:D=N:T=9978])speciation:0.001386[&&NHX:D=N:B=0:T=314147:DD=],(TP63_OcunENSOCUP00000014157:0.04305[&&NHX:D=N:T=9986],TP63_OgarENSOGAP00000003415:0.053686[&&NHX:D=N:T=30611])speciation:0.018263[&&NHX:D=N:B=56:T=314146:DD=])duplication:0.0[&&NHX:DD=Y:T=314146:B=0:D=],TP63_TbelENSTBEP00000003655:0.050557[&&NHX:D=N:T=37347])speciation:0.000127[&&NHX:D=N:B=0:T=314146:DD=],(((((((TP63_PvamENSPVAP00000008543:0.02784[&&NHX:D=N:T=132908],TP63_MlucENSMLUP00000014213:0.029592[&&NHX:D=N:T=59463])speciation:0.007063[&&NHX:D=N:B=37:T=9397:DD=],(((TP63_AmelENSAMEP00000000831:0.015923[&&NHX:D=N:T=9646],TP63_CfamENSCAFP00000020585:0.020935[&&NHX:D=N:T=9615])speciation:0.003042[&&NHX:D=N:T=379584:B=80:DD=],TP63_MpfuENSMPUP00000003407:0.032827[&&NHX:D=N:T=9669])speciation:0.009414[&&NHX:D=N:B=64:T=379584:DD=],TP63_FcatENSFCAP00000000731:0.02322[&&NHX:D=N:T=9685])speciation:0.017067[&&NHX:D=N:T=33554:B=74:DD=])speciation:0.001436[&&NHX:D=N:T=314145:B=0:DD=],((((TP63_BtauENSBTAP00000020544:0.005072[&&NHX:D=N:T=9913],TP63_OariENSOARP00000021997:0.009983[&&NHX:D=N:T=9940])speciation:0.025469[&&NHX:D=N:T=9895:B=100:DD=],TP63_TtruENSTTRP00000011034:0.022489[&&NHX:D=N:T=9739])speciation:0.005877[&&NHX:D=N:B=58:T=91561:DD=],TP63_SscrENSSSCP00000025960:0.02089[&&NHX:D=N:T=9823])speciation:0.005665[&&NHX:D=N:B=29:T=91561:DD=],TP63_VpacENSVPAP00000011479:0.032735[&&NHX:D=N:T=30538])speciation:0.007589[&&NHX:D=N:B=13:T=91561:DD=])speciation:0.001552[&&NHX:D=N:B=0:T=314145:DD=],(TP63_EcabENSECAP00000016315:0.020605[&&NHX:D=N:T=9796],TP63_EeurENSEEUP00000012623:0.068478[&&NHX:D=N:T=9365])speciation:0.015388[&&NHX:D=N:B=15:T=314145:DD=])speciation:0.00388[&&NHX:D=N:T=314145:B=0:DD=],((((((((TP63_HsapENSP00000264731:0.001872[&&NHX:D=N:T=9606],TP63_GgorENSGGOP00000020551:0.002754[&&NHX:D=N:T=9595])speciation:0.000918[&&NHX:D=N:T=207598:B=46:DD=],TP63_PtroENSPTRP00000027067:0.001869[&&NHX:D=N:T=9598])speciation:0.002874[&&NHX:D=N:T=207598:B=46:DD=],TP63_PabeENSPPYP00000016106:0.004542[&&NHX:D=N:T=9601])speciation:0.000913[&&NHX:D=N:T=9604:B=70:DD=],TP63_NleuENSNLEP00000008197:0.004734[&&NHX:D=N:T=61853])speciation:0.000949[&&NHX:D=N:T=314295:B=66:DD=],((TP63_MmulENSMMUP00000038274:0.003714[&&NHX:D=N:T=9544],TP63_CsabENSCSAP00000005295:0.026509[&&NHX:D=N:T=60711])speciation:0.0[&&NHX:D=N:B=31:T=9528:DD=],TP63_PanuENSPANP00000003169:0.001823[&&NHX:D=N:T=9555])speciation:0.010162[&&NHX:D=N:B=31:T=9528:DD=])speciation:0.010185[&&NHX:D=N:T=9526:B=95:DD=],TP63_CjacENSCJAP00000026376:0.015601[&&NHX:D=N:T=9483])speciation:0.013295[&&NHX:D=N:T=314293:B=100:DD=],TP63_MmurENSMICP00000022696:0.021271[&&NHX:D=N:T=30608])speciation:0.0[&&NHX:D=N:B=42:T=9443:DD=],(TP63_TsyrENSTSYP00000003403:0.025783[&&NHX:D=N:T=1868482],TP63_SaraENSSARP00000011553:0.056367[&&NHX:D=N:T=42254])speciation:0.010618[&&NHX:D=N:B=14:T=1437010:DD=])duplication:0.006497[&&NHX:DD=Y:B=1:T=1437010:D=])duplication:0.0[&&NHX:DD=Y:B=0:T=1437010:D=],(TP63_DnovENSDNOP00000012853:0.025753[&&NHX:D=N:T=9361],TP63_ChofENSCHOP00000009300:0.040693[&&NHX:D=N:T=9358])speciation:0.020456[&&NHX:D=N:B=76:T=9348:DD=])speciation:0.001941[&&NHX:D=N:T=9347:B=0:DD=],((TP63_LafrENSLAFP00000020806:0.016207[&&NHX:D=N:T=9785],TP63_PcapENSPCAP00000004708:0.030306[&&NHX:D=N:T=9813])speciation:0.00755[&&NHX:D=N:T=311790:B=91:DD=],TP63_EtelENSETEP00000001864:0.071017[&&NHX:D=N:T=9371])speciation:0.015236[&&NHX:D=N:T=311790:B=8:DD=])speciation:0.007477[&&NHX:D=N:B=0:T=9347:DD=])duplication:0.052158[&&NHX:DD=Y:B=0:T=9347:D=],((TP63_MdomENSMODP00000018831:0.034607[&&NHX:D=N:T=13616],TP63_MeugENSMEUP00000014131:0.045944[&&NHX:D=N:T=9315])speciation:0.011561[&&NHX:D=N:T=9263:B=100:DD=],TP63_SharENSSHAP00000008666:0.303146[&&NHX:D=N:T=9305])speciation:0.054652[&&NHX:D=N:B=12:T=9263:DD=])speciation:0.017647[&&NHX:D=N:B=2:T=32525:DD=],TP63_OanaENSOANP00000021753:0.079276[&&NHX:D=N:T=9258])speciation:0.043447[&&NHX:D=N:T=40674:B=2:DD=])speciation:0.034349[&&NHX:D=N:T=32524:B=0:DD=],tp63_XtroENSXETP00000055541:0.267401[&&NHX:D=N:T=8364])speciation:0.032348[&&NHX:D=N:B=0:T=32523:DD=],(ENSACAG00000002961_AcarENSACAP00000002870:0.0[&&NHX:D=N:T=28377],ENSACAG00000022533_AcarENSACAP00000021196:1.16541[&&NHX:D=N:T=28377])duplication:0.116614[&&NHX:D=Y:T=28377:B=0])duplication:0.005373[&&NHX:D=Y:T=32523:B=0],TP63_LchaENSLACP00000022643:0.17787[&&NHX:D=N:T=7897])speciation:0.031924[&&NHX:D=N:T=8287:B=0:DD=],(((((((tp63_PforENSPFOP00000001124:0.014737[&&NHX:D=N:T=48698],tp63_XmacENSXMAP00000016461:0.044393[&&NHX:D=N:T=8083])speciation:0.052269[&&NHX:D=N:B=99:T=586240:DD=],tp63_OlatENSORLP00000019616:0.105223[&&NHX:D=N:T=8090])speciation:0.020917[&&NHX:D=N:B=24:T=1489913:DD=],tp63_OnilENSONIP00000024326:0.065197[&&NHX:D=N:T=8128])speciation:0.01928[&&NHX:D=N:T=1489908:B=16:DD=],(tp63_TnigENSTNIP00000016776:0.042973[&&NHX:D=N:T=99883],tp63_TrubENSTRUP00000008025:0.048688[&&NHX:D=N:T=31033])speciation:0.043668[&&NHX:D=N:B=100:T=31031:DD=])speciation:0.020832[&&NHX:D=N:B=77:T=1489872:DD=],(ENSGACG00000013629_GacuENSGACP00000018012:0.069577[&&NHX:D=N:T=69293],ENSGMOG00000000413_GmorENSGMOP00000000401:0.110102[&&NHX:D=N:T=8049])speciation:0.067443[&&NHX:D=N:B=97:T=123368:DD=])duplication:0.040724[&&NHX:DD=Y:B=65:T=123368:D=],(tp63_AmexENSAMXP00000004961:0.092792[&&NHX:D=N:T=7994],tp63_DrerENSDARP00000108362:0.121291[&&NHX:D=N:T=7955])speciation:0.046115[&&NHX:D=N:T=186626:B=86:DD=])speciation:0.034365[&&NHX:D=N:T=186625:B=37:DD=],tp63_LocuENSLOCP00000006202:0.102939[&&NHX:D=N:T=7918])speciation:0.049371[&&NHX:D=N:B=52:T=41665:DD=])speciation:0.110844[&&NHX:D=N:B=0:T=117571:DD=],(((((((((((TP73_LafrENSLAFP00000005892:0.029578[&&NHX:D=N:T=9785],TP73_PcapENSPCAP00000000662:0.051492[&&NHX:D=N:T=9813])speciation:0.003183[&&NHX:D=N:T=311790:B=90:DD=],TP73_EtelENSETEP00000007165:0.095673[&&NHX:D=N:T=9371])speciation:0.033805[&&NHX:D=N:T=311790:B=0:DD=],TP73_DnovENSDNOP00000028722:0.457081[&&NHX:D=N:T=9361])speciation:0.006287[&&NHX:D=N:B=0:T=9347:DD=],((((((((TP73_BtauENSBTAP00000007643:0.009498[&&NHX:D=N:T=9913],TP73_OariENSOARP00000017005:0.019572[&&NHX:D=N:T=9940])speciation:0.012531[&&NHX:D=N:T=9895:B=100:DD=],ENSSSCG00000025685_SscrENSSSCP00000022771:0.057187[&&NHX:D=N:T=9823])speciation:0.018712[&&NHX:D=N:T=91561:B=1:DD=],TP73_TtruENSTTRP00000003223:0.039795[&&NHX:D=N:T=9739])speciation:0.015091[&&NHX:D=N:T=91561:B=0:DD=],(((TP73_AmelENSAMEP00000009745:0.040276[&&NHX:D=N:T=9646],TP73_MpfuENSMPUP00000007349:0.069423[&&NHX:D=N:T=9669])speciation:0.011068[&&NHX:D=N:B=5:T=379584:DD=],TP73_CfamENSCAFP00000028819:0.025289[&&NHX:D=N:T=9615])speciation:0.003214[&&NHX:D=N:B=4:T=379584:DD=],TP73_FcatENSFCAP00000010792:0.059719[&&NHX:D=N:T=9685])speciation:0.021832[&&NHX:D=N:B=20:T=33554:DD=])speciation:0.009094[&&NHX:D=N:T=314145:B=0:DD=],TP73_PvamENSPVAP00000008433:0.078992[&&NHX:D=N:T=132908])speciation:0.005352[&&NHX:D=N:T=314145:B=0:DD=],TP73_EeurENSEEUP00000011975:0.098606[&&NHX:D=N:T=9365])speciation:0.0[&&NHX:D=N:B=0:T=314145:DD=],TP73_EcabENSECAP00000001313:0.038035[&&NHX:D=N:T=9796])speciation:0.007356[&&NHX:D=N:T=314145:B=0:DD=],((((((Trp73_MsspMGP_SPRETEiJ_P0068738:0.0082[&&NHX:D=N:T=10096],Trp73_MmusENSMUSP00000101269:0.011834[&&NHX:D=N:T=10090])speciation:0.027464[&&NHX:D=N:B=100:T=862507:DD=],Tp73_RnorENSRNOP00000052265:0.034464[&&NHX:D=N:T=10116])speciation:0.085459[&&NHX:D=N:T=39107:B=100:DD=],TP73_ItriENSSTOP00000022492:0.061184[&&NHX:D=N:T=43179])speciation:0.008334[&&NHX:D=N:B=2:T=33553:DD=],Trp73_DordENSDORP00000013966:0.076743[&&NHX:D=N:T=10020])speciation:0.0[&&NHX:D=N:T=33553:B=0:DD=],TP73_CporENSCPOP00000009800:0.075508[&&NHX:D=N:T=10141])speciation:0.004958[&&NHX:D=N:T=9989:B=0:DD=],((TP73_MmurENSMICP00000031305:0.033995[&&NHX:D=N:T=30608],TP73_OgarENSOGAP00000005402:0.043894[&&NHX:D=N:T=30611])speciation:0.017054[&&NHX:D=N:T=376911:B=93:DD=],((((((TP73_GgorENSGGOP00000015180:0.00182[&&NHX:D=N:T=9595],TP73_HsapENSP00000367545:0.005775[&&NHX:D=N:T=9606])speciation:0.0[&&NHX:D=N:T=207598:B=92:DD=],TP73_PtroENSPTRP00000000118:0.05274[&&NHX:D=N:T=9598])speciation:0.005412[&&NHX:D=N:B=81:T=207598:DD=],TP73_PabeENSPPYP00000002277:0.013149[&&NHX:D=N:T=9601])speciation:0.000495[&&NHX:D=N:B=30:T=9604:DD=],TP73_NleuENSNLEP00000009887:0.326917[&&NHX:D=N:T=61853])speciation:0.010918[&&NHX:D=N:T=314295:B=0:DD=],((TP73_PanuENSPANP00000007545:0.004788[&&NHX:D=N:T=9555],TP73_CsabENSCSAP00000017283:0.012519[&&NHX:D=N:T=60711])speciation:0.000519[&&NHX:D=N:T=9528:B=86:DD=],TP73_MmulENSMMUP00000040655:0.025402[&&NHX:D=N:T=9544])duplication:0.013713[&&NHX:D=N:B=75:T=9528:DD=])speciation:0.010332[&&NHX:D=N:T=9526:B=0:DD=],TP73_CjacENSCJAP00000005070:0.291972[&&NHX:D=N:T=9483])speciation:0.022859[&&NHX:D=N:B=0:T=314293:DD=])speciation:0.014731[&&NHX:D=N:B=0:T=9443:DD=])speciation:0.020217[&&NHX:D=N:T=314146:B=0:DD=])speciation:0.01086[&&NHX:D=N:T=1437010:B=0:DD=])speciation:0.048685[&&NHX:D=N:T=9347:B=0:DD=],ENSSSCG00000003361_SscrENSSSCP00000003644:0.097446[&&NHX:D=N:T=9823])duplication:0.016508[&&NHX:D=Y:T=9347:B=0],((TP73_MeugENSMEUP00000000705:0.023362[&&NHX:D=N:T=9315],TP73_MdomENSMODP00000008216:0.259151[&&NHX:D=N:T=13616])speciation:0.035881[&&NHX:D=N:B=57:T=9263:DD=],TP73_SharENSSHAP00000006513:0.042193[&&NHX:D=N:T=9305])speciation:0.069704[&&NHX:D=N:T=9263:B=36:DD=])speciation:0.023293[&&NHX:D=N:T=32525:B=2:DD=],TP73_OanaENSOANP00000019815:0.30572[&&NHX:D=N:T=9258])speciation:0.017992[&&NHX:D=N:B=0:T=40674:DD=],(((((TP73_GgalENSGALP00000001485:0.002093[&&NHX:D=N:T=9031],TP73_MgalENSMGAP00000001059:0.036491[&&NHX:D=N:T=9103])speciation:0.047733[&&NHX:D=N:T=9005:B=100:DD=],TP73_AplaENSAPLP00000003415:0.02254[&&NHX:D=N:T=8839])speciation:0.021618[&&NHX:D=N:T=1549675:B=97:DD=],(TP73_TgutENSTGUP00000002829:0.010561[&&NHX:D=N:T=59729],TP73_FalbENSFALP00000010031:0.030208[&&NHX:D=N:T=59894])speciation:0.023763[&&NHX:D=N:T=9126:B=100:DD=])speciation:0.016346[&&NHX:D=N:B=97:T=8825:DD=],TP73_PsinENSPSIP00000004448:0.109544[&&NHX:D=N:T=13735])speciation:0.026517[&&NHX:D=N:T=1329799:B=84:DD=],TP73_AcarENSACAP00000001746:0.128451[&&NHX:D=N:T=28377])speciation:0.019965[&&NHX:D=N:B=67:T=32561:DD=])speciation:0.036745[&&NHX:D=N:T=32524:B=15:DD=],tp73_XtroENSXETP00000010981:0.182635[&&NHX:D=N:T=8364])speciation:0.011019[&&NHX:D=N:B=1:T=32523:DD=],TP73_LchaENSLACP00000021702:0.142378[&&NHX:D=N:T=7897])speciation:0.024057[&&NHX:D=N:B=0:T=8287:DD=],((((((tp73_TnigENSTNIP00000014938:0.027328[&&NHX:D=N:T=99883],tp73_TrubENSTRUP00000038165:0.032469[&&NHX:D=N:T=31033])speciation:0.059199[&&NHX:D=N:T=31031:B=100:DD=],tp73_GacuENSGACP00000008676:0.048591[&&NHX:D=N:T=69293])speciation:0.007086[&&NHX:D=N:T=1489922:B=29:DD=],(((tp73_PforENSPFOP00000010896:0.013197[&&NHX:D=N:T=48698],tp73_XmacENSXMAP00000017403:0.030558[&&NHX:D=N:T=8083])speciation:0.063838[&&NHX:D=N:B=100:T=586240:DD=],tp73_OlatENSORLP00000005521:0.062083[&&NHX:D=N:T=8090])speciation:0.017304[&&NHX:D=N:B=58:T=1489913:DD=],tp73_OnilENSONIP00000002627:0.053778[&&NHX:D=N:T=8128])speciation:0.014746[&&NHX:D=N:T=1489908:B=29:DD=])speciation:0.072637[&&NHX:D=N:B=14:T=1489872:DD=],tp73_GmorENSGMOP00000016675:0.181445[&&NHX:D=N:T=8049])speciation:0.038065[&&NHX:D=N:T=123368:B=98:DD=],(tp73_AmexENSAMXP00000014358:0.086906[&&NHX:D=N:T=7994],tp73_DrerENSDARP00000109674:0.134572[&&NHX:D=N:T=7955])speciation:0.064476[&&NHX:D=N:T=186626:B=100:DD=])speciation:0.04364[&&NHX:D=N:T=186625:B=43:DD=],tp73_LocuENSLOCP00000006343:0.115822[&&NHX:D=N:T=7918])speciation:0.046704[&&NHX:D=N:T=41665:B=14:DD=])speciation:0.167736[&&NHX:D=N:T=117571:B=27:DD=])duplication:0.067299[&&NHX:D=Y:B=0:T=117571],tp63_PmarENSPMAP00000007639:0.797694[&&NHX:D=N:T=7757])speciation:0.076045[&&NHX:D=N:T=7742:B=0:DD=],(('p53/p73-b CintENSCINP00000004447':0.450754[&&NHX:D=N:T=7719],ENSCSAVG00000009788_CsavENSCSAVP00000016659:0.47517[&&NHX:D=N:T=51511])speciation:0.378426[&&NHX:D=N:B=100:T=7718:DD=],(ENSCING00000001960_CintENSCINP00000003956:0.141945[&&NHX:D=N:T=7719],ENSCSAVG00000009964_CsavENSCSAVP00000016940:0.26284[&&NHX:D=N:T=51511])speciation:0.525939[&&NHX:D=N:T=7718:B=100:DD=])duplication:0.603292[&&NHX:D=Y:B=100:T=7718])duplication:0.0[&&NHX:D=N:T=7711:B=0:DD=];\",\n            \"LRF2\" : \"((((((((((((((((((TP53_AmelENSAMEP00000017825:0.0263[&&NHX:D=N:T=9646],TP53_MpfuENSMPUP00000008945:0.066538[&&NHX:D=N:T=9669])speciation:0.032561[&&NHX:D=N:B=99:T=379584:DD=],TP53_CfamENSCAFP00000024579:0.086484[&&NHX:D=N:T=9615])speciation:0.034068[&&NHX:D=N:B=81:T=379584:DD=],TP53_FcatENSFCAP00000008925:0.06619[&&NHX:D=N:T=9685])speciation:0.025911[&&NHX:D=N:B=31:T=33554:DD=],TP53_EcabENSECAP00000006210:0.04971[&&NHX:D=N:T=9796])speciation:0.01224[&&NHX:D=N:T=314145:B=17:DD=],(((TP53_BtauENSBTAP00000001420:0.043108[&&NHX:D=N:T=9913],TP53_OariENSOARP00000016707:0.049064[&&NHX:D=N:T=9940])speciation:0.055294[&&NHX:D=N:B=98:T=9895:DD=],TP53_TtruENSTTRP00000009721:0.022529[&&NHX:D=N:T=9739])speciation:0.022515[&&NHX:D=N:T=91561:B=39:DD=],TP53_SscrENSSSCP00000019016:0.065797[&&NHX:D=N:T=9823])speciation:0.020972[&&NHX:D=N:T=91561:B=35:DD=])speciation:0.006996[&&NHX:D=N:B=9:T=314145:DD=],TP53_SaraENSSARP00000005616:0.149927[&&NHX:D=N:T=42254])speciation:0.013221[&&NHX:D=N:T=314145:B=7:DD=],TP53_PvamENSPVAP00000015400:0.117578[&&NHX:D=N:T=132908])speciation:0.0[&&NHX:D=N:B=1:T=314145:DD=],((ENSMLUG00000006411_MlucENSMLUP00000005861:0.003702[&&NHX:D=N:T=59463],ENSMLUG00000025140_MlucENSMLUP00000016733:0.12569[&&NHX:D=N:T=59463])duplication:0.131525[&&NHX:D=Y:T=59463:B=100],TP53_EeurENSEEUP00000013295:0.183463[&&NHX:D=N:T=9365])speciation:0.042602[&&NHX:D=N:T=314145:B=33:DD=])duplication:0.018327[&&NHX:DD=Y:T=314145:B=0:D=],(((((Trp53_MmusENSMUSP00000104298:0.002681[&&NHX:D=N:T=10090],Trp53_MsspMGP_SPRETEiJ_P0028933:0.017851[&&NHX:D=N:T=10096])speciation:0.064969[&&NHX:D=N:B=100:T=862507:DD=],Tp53_RnorENSRNOP00000074031:0.079068[&&NHX:D=N:T=10116])speciation:0.12872[&&NHX:D=N:T=39107:B=100:DD=],LOC100910954_RnorENSRNOP00000064177:0.056502[&&NHX:D=N:T=10116])duplication:0.0[&&NHX:D=Y:B=5:T=39107],TP53_OpriENSOPRP00000005906:0.185911[&&NHX:D=N:T=9978])speciation:0.0[&&NHX:D=N:T=314147:B=0:DD=],((((TP53_MmurENSMICP00000039812:0.054544[&&NHX:D=N:T=30608],TP53_OgarENSOGAP00000015106:0.095719[&&NHX:D=N:T=30611])speciation:0.012762[&&NHX:D=N:B=52:T=376911:DD=],((((((TP53_HsapENSP00000269305:0.0[&&NHX:D=N:T=9606],TP53_GgorENSGGOP00000009561:0.002907[&&NHX:D=N:T=9595])speciation:0.001345[&&NHX:D=N:B=61:T=207598:DD=],TP53_PtroENSPTRP00000014836:0.000592[&&NHX:D=N:T=9598])speciation:0.00877[&&NHX:D=N:B=61:T=207598:DD=],TP53_PabeENSPPYP00000008923:0.009552[&&NHX:D=N:T=9601])speciation:4.8e-05[&&NHX:D=N:T=9604:B=100:DD=],TP53_NleuENSNLEP00000011861:0.032229[&&NHX:D=N:T=61853])speciation:0.004444[&&NHX:D=N:T=314295:B=97:DD=],((TP53_PanuENSPANP00000019643:0.007102[&&NHX:D=N:T=9555],TP53_CsabENSCSAP00000007551:0.010543[&&NHX:D=N:T=60711])speciation:0.000953[&&NHX:D=N:B=100:T=9528:DD=],TP53_MmulENSMMUP00000035274:0.043449[&&NHX:D=N:T=9544])speciation:0.019535[&&NHX:D=N:T=9528:B=55:DD=])speciation:0.013822[&&NHX:D=N:T=9526:B=52:DD=],TP53_CjacENSCJAP00000027663:0.047099[&&NHX:D=N:T=9483])speciation:0.027286[&&NHX:D=N:B=57:T=314293:DD=])speciation:0.013265[&&NHX:D=N:T=9443:B=4:DD=],TP53_TbelENSTBEP00000010189:0.222843[&&NHX:D=N:T=37347])speciation:0.008121[&&NHX:D=N:B=0:T=314146:DD=],((TP53_ItriENSSTOP00000019678:0.08339[&&NHX:D=N:T=43179],Tp53_CporENSCPOP00000012841:0.120892[&&NHX:D=N:T=10141])speciation:0.018406[&&NHX:D=N:T=9989:B=42:DD=],(ENSOCUG00000001138_OcunENSOCUP00000000989:0.013142[&&NHX:D=N:T=9986],ENSOCUG00000022109_OcunENSOCUP00000025959:0.090881[&&NHX:D=N:T=9986])duplication:0.069194[&&NHX:D=Y:T=9986:B=97])speciation:0.015339[&&NHX:D=N:T=314147:B=15:DD=])speciation:0.019539[&&NHX:D=N:B=0:T=314146:DD=])duplication:0.026935[&&NHX:DD=Y:T=314146:B=0:D=])speciation:0.017095[&&NHX:D=N:T=1437010:B=0:DD=],((((((((ENSLAFG00000028692_LafrENSLAFP00000023554:0.00886[&&NHX:D=N:T=9785],ENSLAFG00000030880_LafrENSLAFP00000027441:0.052436[&&NHX:D=N:T=9785])duplication:0.006909[&&NHX:D=Y:B=0:T=9785],ENSLAFG00000030555_LafrENSLAFP00000027808:0.044446[&&NHX:D=N:T=9785])duplication:0.003043[&&NHX:D=Y:T=9785:B=0],(ENSLAFG00000028299_LafrENSLAFP00000024998:0.011792[&&NHX:D=N:T=9785],ENSLAFG00000032042_LafrENSLAFP00000023389:0.017693[&&NHX:D=N:T=9785])duplication:0.015904[&&NHX:D=Y:T=9785:B=74])duplication:0.0[&&NHX:D=Y:B=0:T=9785],(((ENSLAFG00000027365_LafrENSLAFP00000025852:0.011873[&&NHX:D=N:T=9785],ENSLAFG00000026238_LafrENSLAFP00000027253:0.026457[&&NHX:D=N:T=9785])duplication:0.019571[&&NHX:D=Y:T=9785:B=81],ENSLAFG00000027669_LafrENSLAFP00000028793:0.027495[&&NHX:D=N:T=9785])duplication:0.016599[&&NHX:D=Y:T=9785:B=70],ENSLAFG00000027820_LafrENSLAFP00000028173:0.058133[&&NHX:D=N:T=9785])duplication:0.031788[&&NHX:D=Y:T=9785:B=87])duplication:0.038135[&&NHX:D=Y:T=9785:B=10],(ENSLAFG00000027348_LafrENSLAFP00000027515:0.028441[&&NHX:D=N:T=9785],ENSLAFG00000027474_LafrENSLAFP00000018379:0.03464[&&NHX:D=N:T=9785])duplication:0.131904[&&NHX:D=Y:B=100:T=9785])duplication:0.082412[&&NHX:D=Y:T=9785:B=96],ENSLAFG00000007483_LafrENSLAFP00000006292:0.058399[&&NHX:D=N:T=9785])duplication:0.0075[&&NHX:D=Y:T=9785:B=23],TP53_PcapENSPCAP00000011892:0.114307[&&NHX:D=N:T=9813])speciation:0.010282[&&NHX:D=N:T=311790:B=18:DD=],(ENSETEG00000008987_EtelENSETEP00000007296:0.0[&&NHX:D=N:T=9371],ENSETEG00000009984_EtelENSETEP00000008111:0.105253[&&NHX:D=N:T=9371])duplication:0.154739[&&NHX:D=Y:B=100:T=9371])speciation:0.044399[&&NHX:D=N:T=311790:B=35:DD=])speciation:0.041158[&&NHX:D=N:B=0:T=9347:DD=],TP53_DnovENSDNOP00000004075:0.078395[&&NHX:D=N:T=9361])speciation:0.080059[&&NHX:D=N:B=0:T=9347:DD=],((TP53_SharENSSHAP00000018268:0.0496[&&NHX:D=N:T=9305],ENSMODG00000007271_MdomENSMODP00000009014:0.172546[&&NHX:D=N:T=13616])speciation:0.024952[&&NHX:D=N:T=9263:B=83:DD=],ENSMEUG00000013135_MeugENSMEUP00000011978:0.069167[&&NHX:D=N:T=9315])speciation:0.225429[&&NHX:D=N:B=83:T=9263:DD=])speciation:0.228895[&&NHX:D=N:B=81:T=32525:DD=],tp53_XtroENSXETP00000053759:0.483686[&&NHX:D=N:T=8364])speciation:0.095084[&&NHX:D=N:B=55:T=32523:DD=],(TP53_PsinENSPSIP00000014905:0.228951[&&NHX:D=N:T=13735],ENSOANG00000011981_OanaENSOANP00000018980:0.553865[&&NHX:D=N:T=9258])speciation:0.126185[&&NHX:D=N:B=48:T=32524:DD=])duplication:0.03737[&&NHX:DD=Y:B=17:T=32523:D=],TP53_LchaENSLACP00000015915:0.317935[&&NHX:D=N:T=7897])speciation:0.062274[&&NHX:D=N:B=13:T=8287:DD=],(((tp53_DrerENSDARP00000051548:0.365455[&&NHX:D=N:T=7955],tp53_AmexENSAMXP00000021366:0.579505[&&NHX:D=N:T=7994])speciation:0.105036[&&NHX:D=N:B=46:T=186626:DD=],((((((tp53_TrubENSTRUP00000030645:0.158124[&&NHX:D=N:T=31033],tp53_TnigENSTNIP00000013035:0.25403[&&NHX:D=N:T=99883])speciation:0.1396[&&NHX:D=N:T=31031:B=100:DD=],tp53_OlatENSORLP00000008029:0.359414[&&NHX:D=N:T=8090])speciation:0.040022[&&NHX:D=N:T=1489872:B=1:DD=],(tp53_GacuENSGACP00000025614:0.249641[&&NHX:D=N:T=69293],tp53_OnilENSONIP00000023874:0.251831[&&NHX:D=N:T=8128])speciation:0.085834[&&NHX:D=N:T=1489872:B=100:DD=])duplication:0.070104[&&NHX:DD=Y:T=1489872:B=0:D=],(tp53_PforENSPFOP00000007556:0.070709[&&NHX:D=N:T=48698],tp53_XmacENSXMAP00000015753:0.165631[&&NHX:D=N:T=8083])speciation:0.290725[&&NHX:D=N:B=100:T=586240:DD=])duplication:0.058888[&&NHX:DD=Y:B=2:T=1489872:D=],ENSGMOG00000007755_GmorENSGMOP00000008291:0.272843[&&NHX:D=N:T=8049])speciation:0.143728[&&NHX:D=N:T=123368:B=3:DD=],TP531ofmany_AmexENSAMXP00000007265:0.383807[&&NHX:D=N:T=7994])speciation:0.129809[&&NHX:D=N:T=186625:B=41:DD=])duplication:0.079851[&&NHX:D=Y:B=6:T=186625],tp53_LocuENSLOCP00000017063:0.263043[&&NHX:D=N:T=7918])speciation:0.079504[&&NHX:D=N:T=41665:B=5:DD=])speciation:0.205725[&&NHX:D=N:B=10:T=117571:DD=],ENSPMAG00000009535_PmarENSPMAP00000010479:0.363682[&&NHX:D=N:T=7757])speciation:0.005138[&&NHX:D=N:B=0:T=7742:DD=],((((((((((((TP63_MgalENSMGAP00000001036:0.00675[&&NHX:D=N:T=9103],TP63_GgalENSGALP00000032705:0.02786[&&NHX:D=N:T=9031])speciation:0.018196[&&NHX:D=N:B=100:T=9005:DD=],TP63_AplaENSAPLP00000012746:0.025285[&&NHX:D=N:T=8839])speciation:0.020559[&&NHX:D=N:B=100:T=1549675:DD=],(TP63_TgutENSTGUP00000009686:0.018245[&&NHX:D=N:T=59729],TP63_FalbENSFALP00000007718:0.02902[&&NHX:D=N:T=59894])speciation:0.022707[&&NHX:D=N:B=100:T=9126:DD=])speciation:0.046097[&&NHX:D=N:T=8825:B=100:DD=],TP63_PsinENSPSIP00000018044:0.123057[&&NHX:D=N:T=13735])speciation:0.005555[&&NHX:D=N:T=1329799:B=37:DD=],TP63_AcarENSACAP00000000376:0.736631[&&NHX:D=N:T=28377])speciation:0.010123[&&NHX:D=N:B=0:T=32561:DD=],(((((((((((Trp63_MmusENSMUSP00000110965:0.000847[&&NHX:D=N:T=10090],Trp63_MsspMGP_SPRETEiJ_P0042982:0.004734[&&NHX:D=N:T=10096])speciation:0.021561[&&NHX:D=N:B=100:T=862507:DD=],Tp63_RnorENSRNOP00000033463:0.030383[&&NHX:D=N:T=10116])speciation:0.048568[&&NHX:D=N:T=39107:B=100:DD=],Trp63_DordENSDORP00000001930:0.044582[&&NHX:D=N:T=10020])speciation:0.014056[&&NHX:D=N:B=17:T=33553:DD=],TP63_ItriENSSTOP00000012357:0.057295[&&NHX:D=N:T=43179])speciation:0.000474[&&NHX:D=N:T=33553:B=0:DD=],TP63_CporENSCPOP00000013308:0.058396[&&NHX:D=N:T=10141])speciation:0.003336[&&NHX:D=N:B=0:T=9989:DD=],TP63_OpriENSOPRP00000002632:0.076764[&&NHX:D=N:T=9978])speciation:0.001386[&&NHX:D=N:B=0:T=314147:DD=],(TP63_OcunENSOCUP00000014157:0.04305[&&NHX:D=N:T=9986],TP63_OgarENSOGAP00000003415:0.053686[&&NHX:D=N:T=30611])speciation:0.018263[&&NHX:D=N:B=56:T=314146:DD=])duplication:0.0[&&NHX:DD=Y:T=314146:B=0:D=],TP63_TbelENSTBEP00000003655:0.050557[&&NHX:D=N:T=37347])speciation:0.000127[&&NHX:D=N:B=0:T=314146:DD=],(((((((TP63_PvamENSPVAP00000008543:0.02784[&&NHX:D=N:T=132908],TP63_MlucENSMLUP00000014213:0.029592[&&NHX:D=N:T=59463])speciation:0.007063[&&NHX:D=N:B=37:T=9397:DD=],(((TP63_AmelENSAMEP00000000831:0.015923[&&NHX:D=N:T=9646],TP63_CfamENSCAFP00000020585:0.020935[&&NHX:D=N:T=9615])speciation:0.003042[&&NHX:D=N:T=379584:B=80:DD=],TP63_MpfuENSMPUP00000003407:0.032827[&&NHX:D=N:T=9669])speciation:0.009414[&&NHX:D=N:B=64:T=379584:DD=],TP63_FcatENSFCAP00000000731:0.02322[&&NHX:D=N:T=9685])speciation:0.017067[&&NHX:D=N:T=33554:B=74:DD=])speciation:0.001436[&&NHX:D=N:T=314145:B=0:DD=],((((TP63_BtauENSBTAP00000020544:0.005072[&&NHX:D=N:T=9913],TP63_OariENSOARP00000021997:0.009983[&&NHX:D=N:T=9940])speciation:0.025469[&&NHX:D=N:T=9895:B=100:DD=],TP63_TtruENSTTRP00000011034:0.022489[&&NHX:D=N:T=9739])speciation:0.005877[&&NHX:D=N:B=58:T=91561:DD=],TP63_SscrENSSSCP00000025960:0.02089[&&NHX:D=N:T=9823])speciation:0.005665[&&NHX:D=N:B=29:T=91561:DD=],TP63_VpacENSVPAP00000011479:0.032735[&&NHX:D=N:T=30538])speciation:0.007589[&&NHX:D=N:B=13:T=91561:DD=])speciation:0.001552[&&NHX:D=N:B=0:T=314145:DD=],(TP63_EcabENSECAP00000016315:0.020605[&&NHX:D=N:T=9796],TP63_EeurENSEEUP00000012623:0.068478[&&NHX:D=N:T=9365])speciation:0.015388[&&NHX:D=N:B=15:T=314145:DD=])speciation:0.00388[&&NHX:D=N:T=314145:B=0:DD=],((((((((TP63_HsapENSP00000264731:0.001872[&&NHX:D=N:T=9606],TP63_GgorENSGGOP00000020551:0.002754[&&NHX:D=N:T=9595])speciation:0.000918[&&NHX:D=N:T=207598:B=46:DD=],TP63_PtroENSPTRP00000027067:0.001869[&&NHX:D=N:T=9598])speciation:0.002874[&&NHX:D=N:T=207598:B=46:DD=],TP63_PabeENSPPYP00000016106:0.004542[&&NHX:D=N:T=9601])speciation:0.000913[&&NHX:D=N:T=9604:B=70:DD=],TP63_NleuENSNLEP00000008197:0.004734[&&NHX:D=N:T=61853])speciation:0.000949[&&NHX:D=N:T=314295:B=66:DD=],((TP63_MmulENSMMUP00000038274:0.003714[&&NHX:D=N:T=9544],TP63_CsabENSCSAP00000005295:0.026509[&&NHX:D=N:T=60711])speciation:0.0[&&NHX:D=N:B=31:T=9528:DD=],TP63_PanuENSPANP00000003169:0.001823[&&NHX:D=N:T=9555])speciation:0.010162[&&NHX:D=N:B=31:T=9528:DD=])speciation:0.010185[&&NHX:D=N:T=9526:B=95:DD=],TP63_CjacENSCJAP00000026376:0.015601[&&NHX:D=N:T=9483])speciation:0.013295[&&NHX:D=N:T=314293:B=100:DD=],TP63_MmurENSMICP00000022696:0.021271[&&NHX:D=N:T=30608])speciation:0.0[&&NHX:D=N:B=42:T=9443:DD=],(TP63_TsyrENSTSYP00000003403:0.025783[&&NHX:D=N:T=1868482],TP63_SaraENSSARP00000011553:0.056367[&&NHX:D=N:T=42254])speciation:0.010618[&&NHX:D=N:B=14:T=1437010:DD=])duplication:0.006497[&&NHX:DD=Y:B=1:T=1437010:D=])duplication:0.0[&&NHX:DD=Y:B=0:T=1437010:D=],(TP63_DnovENSDNOP00000012853:0.025753[&&NHX:D=N:T=9361],TP63_ChofENSCHOP00000009300:0.040693[&&NHX:D=N:T=9358])speciation:0.020456[&&NHX:D=N:B=76:T=9348:DD=])speciation:0.001941[&&NHX:D=N:T=9347:B=0:DD=],((TP63_LafrENSLAFP00000020806:0.016207[&&NHX:D=N:T=9785],TP63_PcapENSPCAP00000004708:0.030306[&&NHX:D=N:T=9813])speciation:0.00755[&&NHX:D=N:T=311790:B=91:DD=],TP63_EtelENSETEP00000001864:0.071017[&&NHX:D=N:T=9371])speciation:0.015236[&&NHX:D=N:T=311790:B=8:DD=])speciation:0.007477[&&NHX:D=N:B=0:T=9347:DD=])duplication:0.052158[&&NHX:DD=Y:B=0:T=9347:D=],((TP63_MdomENSMODP00000018831:0.034607[&&NHX:D=N:T=13616],TP63_MeugENSMEUP00000014131:0.045944[&&NHX:D=N:T=9315])speciation:0.011561[&&NHX:D=N:T=9263:B=100:DD=],TP63_SharENSSHAP00000008666:0.303146[&&NHX:D=N:T=9305])speciation:0.054652[&&NHX:D=N:B=12:T=9263:DD=])speciation:0.017647[&&NHX:D=N:B=2:T=32525:DD=],TP63_OanaENSOANP00000021753:0.079276[&&NHX:D=N:T=9258])speciation:0.043447[&&NHX:D=N:T=40674:B=2:DD=])speciation:0.034349[&&NHX:D=N:T=32524:B=0:DD=],tp63_XtroENSXETP00000055541:0.267401[&&NHX:D=N:T=8364])speciation:0.032348[&&NHX:D=N:B=0:T=32523:DD=],(ENSACAG00000002961_AcarENSACAP00000002870:0.0[&&NHX:D=N:T=28377],ENSACAG00000022533_AcarENSACAP00000021196:1.16541[&&NHX:D=N:T=28377])duplication:0.116614[&&NHX:D=Y:T=28377:B=0])duplication:0.005373[&&NHX:D=Y:T=32523:B=0],TP63_LchaENSLACP00000022643:0.17787[&&NHX:D=N:T=7897])speciation:0.031924[&&NHX:D=N:T=8287:B=0:DD=],(((((((tp63_PforENSPFOP00000001124:0.014737[&&NHX:D=N:T=48698],tp63_XmacENSXMAP00000016461:0.044393[&&NHX:D=N:T=8083])speciation:0.052269[&&NHX:D=N:B=99:T=586240:DD=],tp63_OlatENSORLP00000019616:0.105223[&&NHX:D=N:T=8090])speciation:0.020917[&&NHX:D=N:B=24:T=1489913:DD=],tp63_OnilENSONIP00000024326:0.065197[&&NHX:D=N:T=8128])speciation:0.01928[&&NHX:D=N:T=1489908:B=16:DD=],(tp63_TnigENSTNIP00000016776:0.042973[&&NHX:D=N:T=99883],tp63_TrubENSTRUP00000008025:0.048688[&&NHX:D=N:T=31033])speciation:0.043668[&&NHX:D=N:B=100:T=31031:DD=])speciation:0.020832[&&NHX:D=N:B=77:T=1489872:DD=],(ENSGACG00000013629_GacuENSGACP00000018012:0.069577[&&NHX:D=N:T=69293],ENSGMOG00000000413_GmorENSGMOP00000000401:0.110102[&&NHX:D=N:T=8049])speciation:0.067443[&&NHX:D=N:B=97:T=123368:DD=])duplication:0.040724[&&NHX:DD=Y:B=65:T=123368:D=],(tp63_AmexENSAMXP00000004961:0.092792[&&NHX:D=N:T=7994],tp63_DrerENSDARP00000108362:0.121291[&&NHX:D=N:T=7955])speciation:0.046115[&&NHX:D=N:T=186626:B=86:DD=])speciation:0.034365[&&NHX:D=N:T=186625:B=37:DD=],tp63_LocuENSLOCP00000006202:0.102939[&&NHX:D=N:T=7918])speciation:0.049371[&&NHX:D=N:B=52:T=41665:DD=])speciation:0.110844[&&NHX:D=N:B=0:T=117571:DD=],(((((((((((TP73_LafrENSLAFP00000005892:0.029578[&&NHX:D=N:T=9785],TP73_PcapENSPCAP00000000662:0.051492[&&NHX:D=N:T=9813])speciation:0.003183[&&NHX:D=N:T=311790:B=90:DD=],TP73_EtelENSETEP00000007165:0.095673[&&NHX:D=N:T=9371])speciation:0.033805[&&NHX:D=N:T=311790:B=0:DD=],TP73_DnovENSDNOP00000028722:0.457081[&&NHX:D=N:T=9361])speciation:0.006287[&&NHX:D=N:B=0:T=9347:DD=],((((((((TP73_BtauENSBTAP00000007643:0.009498[&&NHX:D=N:T=9913],TP73_OariENSOARP00000017005:0.019572[&&NHX:D=N:T=9940])speciation:0.012531[&&NHX:D=N:T=9895:B=100:DD=],ENSSSCG00000025685_SscrENSSSCP00000022771:0.057187[&&NHX:D=N:T=9823])speciation:0.018712[&&NHX:D=N:T=91561:B=1:DD=],TP73_TtruENSTTRP00000003223:0.039795[&&NHX:D=N:T=9739])speciation:0.015091[&&NHX:D=N:T=91561:B=0:DD=],(((TP73_AmelENSAMEP00000009745:0.040276[&&NHX:D=N:T=9646],TP73_MpfuENSMPUP00000007349:0.069423[&&NHX:D=N:T=9669])speciation:0.011068[&&NHX:D=N:B=5:T=379584:DD=],TP73_CfamENSCAFP00000028819:0.025289[&&NHX:D=N:T=9615])speciation:0.003214[&&NHX:D=N:B=4:T=379584:DD=],TP73_FcatENSFCAP00000010792:0.059719[&&NHX:D=N:T=9685])speciation:0.021832[&&NHX:D=N:B=20:T=33554:DD=])speciation:0.009094[&&NHX:D=N:T=314145:B=0:DD=],TP73_PvamENSPVAP00000008433:0.078992[&&NHX:D=N:T=132908])speciation:0.005352[&&NHX:D=N:T=314145:B=0:DD=],TP73_EeurENSEEUP00000011975:0.098606[&&NHX:D=N:T=9365])speciation:0.0[&&NHX:D=N:B=0:T=314145:DD=],TP73_EcabENSECAP00000001313:0.038035[&&NHX:D=N:T=9796])speciation:0.007356[&&NHX:D=N:T=314145:B=0:DD=],((((((Trp73_MsspMGP_SPRETEiJ_P0068738:0.0082[&&NHX:D=N:T=10096],Trp73_MmusENSMUSP00000101269:0.011834[&&NHX:D=N:T=10090])speciation:0.027464[&&NHX:D=N:B=100:T=862507:DD=],Tp73_RnorENSRNOP00000052265:0.034464[&&NHX:D=N:T=10116])speciation:0.085459[&&NHX:D=N:T=39107:B=100:DD=],TP73_ItriENSSTOP00000022492:0.061184[&&NHX:D=N:T=43179])speciation:0.008334[&&NHX:D=N:B=2:T=33553:DD=],Trp73_DordENSDORP00000013966:0.076743[&&NHX:D=N:T=10020])speciation:0.0[&&NHX:D=N:T=33553:B=0:DD=],TP73_CporENSCPOP00000009800:0.075508[&&NHX:D=N:T=10141])speciation:0.004958[&&NHX:D=N:T=9989:B=0:DD=],((TP73_MmurENSMICP00000031305:0.033995[&&NHX:D=N:T=30608],TP73_OgarENSOGAP00000005402:0.043894[&&NHX:D=N:T=30611])speciation:0.017054[&&NHX:D=N:T=376911:B=93:DD=],((((((TP73_GgorENSGGOP00000015180:0.00182[&&NHX:D=N:T=9595],TP73_HsapENSP00000367545:0.005775[&&NHX:D=N:T=9606])speciation:0.0[&&NHX:D=N:T=207598:B=92:DD=],TP73_PtroENSPTRP00000000118:0.05274[&&NHX:D=N:T=9598])speciation:0.005412[&&NHX:D=N:B=81:T=207598:DD=],TP73_PabeENSPPYP00000002277:0.013149[&&NHX:D=N:T=9601])speciation:0.000495[&&NHX:D=N:B=30:T=9604:DD=],TP73_NleuENSNLEP00000009887:0.326917[&&NHX:D=N:T=61853])speciation:0.010918[&&NHX:D=N:T=314295:B=0:DD=],((TP73_PanuENSPANP00000007545:0.004788[&&NHX:D=N:T=9555],TP73_CsabENSCSAP00000017283:0.012519[&&NHX:D=N:T=60711])speciation:0.000519[&&NHX:D=N:T=9528:B=86:DD=],TP73_MmulENSMMUP00000040655:0.025402[&&NHX:D=N:T=9544])speciation:0.013713[&&NHX:D=N:B=75:T=9528:DD=])speciation:0.010332[&&NHX:D=N:T=9526:B=0:DD=],TP73_CjacENSCJAP00000005070:0.291972[&&NHX:D=N:T=9483])speciation:0.022859[&&NHX:D=N:B=0:T=314293:DD=])speciation:0.014731[&&NHX:D=N:B=0:T=9443:DD=])speciation:0.020217[&&NHX:D=N:T=314146:B=0:DD=])speciation:0.01086[&&NHX:D=N:T=1437010:B=0:DD=])speciation:0.048685[&&NHX:D=N:T=9347:B=0:DD=],ENSSSCG00000003361_SscrENSSSCP00000003644:0.097446[&&NHX:D=N:T=9823])duplication:0.016508[&&NHX:D=Y:T=9347:B=0],((TP73_MeugENSMEUP00000000705:0.023362[&&NHX:D=N:T=9315],TP73_MdomENSMODP00000008216:0.259151[&&NHX:D=N:T=13616])speciation:0.035881[&&NHX:D=N:B=57:T=9263:DD=],TP73_SharENSSHAP00000006513:0.042193[&&NHX:D=N:T=9305])speciation:0.069704[&&NHX:D=N:T=9263:B=36:DD=])speciation:0.023293[&&NHX:D=N:T=32525:B=2:DD=],TP73_OanaENSOANP00000019815:0.30572[&&NHX:D=N:T=9258])speciation:0.017992[&&NHX:D=N:B=0:T=40674:DD=],(((((TP73_GgalENSGALP00000001485:0.002093[&&NHX:D=N:T=9031],TP73_MgalENSMGAP00000001059:0.036491[&&NHX:D=N:T=9103])speciation:0.047733[&&NHX:D=N:T=9005:B=100:DD=],TP73_AplaENSAPLP00000003415:0.02254[&&NHX:D=N:T=8839])speciation:0.021618[&&NHX:D=N:T=1549675:B=97:DD=],(TP73_TgutENSTGUP00000002829:0.010561[&&NHX:D=N:T=59729],TP73_FalbENSFALP00000010031:0.030208[&&NHX:D=N:T=59894])speciation:0.023763[&&NHX:D=N:T=9126:B=100:DD=])speciation:0.016346[&&NHX:D=N:B=97:T=8825:DD=],TP73_PsinENSPSIP00000004448:0.109544[&&NHX:D=N:T=13735])speciation:0.026517[&&NHX:D=N:T=1329799:B=84:DD=],TP73_AcarENSACAP00000001746:0.128451[&&NHX:D=N:T=28377])speciation:0.019965[&&NHX:D=N:B=67:T=32561:DD=])speciation:0.036745[&&NHX:D=N:T=32524:B=15:DD=],tp73_XtroENSXETP00000010981:0.182635[&&NHX:D=N:T=8364])speciation:0.011019[&&NHX:D=N:B=1:T=32523:DD=],TP73_LchaENSLACP00000021702:0.142378[&&NHX:D=N:T=7897])speciation:0.024057[&&NHX:D=N:B=0:T=8287:DD=],((((((tp73_TnigENSTNIP00000014938:0.027328[&&NHX:D=N:T=99883],tp73_TrubENSTRUP00000038165:0.032469[&&NHX:D=N:T=31033])speciation:0.059199[&&NHX:D=N:T=31031:B=100:DD=],tp73_GacuENSGACP00000008676:0.048591[&&NHX:D=N:T=69293])speciation:0.007086[&&NHX:D=N:T=1489922:B=29:DD=],(((tp73_PforENSPFOP00000010896:0.013197[&&NHX:D=N:T=48698],tp73_XmacENSXMAP00000017403:0.030558[&&NHX:D=N:T=8083])speciation:0.063838[&&NHX:D=N:B=100:T=586240:DD=],tp73_OlatENSORLP00000005521:0.062083[&&NHX:D=N:T=8090])speciation:0.017304[&&NHX:D=N:B=58:T=1489913:DD=],tp73_OnilENSONIP00000002627:0.053778[&&NHX:D=N:T=8128])speciation:0.014746[&&NHX:D=N:T=1489908:B=29:DD=])speciation:0.072637[&&NHX:D=N:B=14:T=1489872:DD=],tp73_GmorENSGMOP00000016675:0.181445[&&NHX:D=N:T=8049])speciation:0.038065[&&NHX:D=N:T=123368:B=98:DD=],(tp73_AmexENSAMXP00000014358:0.086906[&&NHX:D=N:T=7994],tp73_DrerENSDARP00000109674:0.134572[&&NHX:D=N:T=7955])speciation:0.064476[&&NHX:D=N:T=186626:B=100:DD=])speciation:0.04364[&&NHX:D=N:T=186625:B=43:DD=],tp73_LocuENSLOCP00000006343:0.115822[&&NHX:D=N:T=7918])speciation:0.046704[&&NHX:D=N:T=41665:B=14:DD=])speciation:0.167736[&&NHX:D=N:T=117571:B=27:DD=])duplication:0.067299[&&NHX:D=Y:B=0:T=117571],tp63_PmarENSPMAP00000007639:0.797694[&&NHX:D=N:T=7757])speciation:0.076045[&&NHX:D=N:T=7742:B=0:DD=],(('p53/p73-b CintENSCINP00000004447':0.450754[&&NHX:D=N:T=7719],ENSCSAVG00000009788_CsavENSCSAVP00000016659:0.47517[&&NHX:D=N:T=51511])speciation:0.378426[&&NHX:D=N:B=100:T=7718:DD=],(ENSCING00000001960_CintENSCINP00000003956:0.141945[&&NHX:D=N:T=7719],ENSCSAVG00000009964_CsavENSCSAVP00000016940:0.26284[&&NHX:D=N:T=51511])speciation:0.525939[&&NHX:D=N:T=7718:B=100:DD=])duplication:0.603292[&&NHX:D=Y:B=100:T=7718])duplication:0.0[&&NHX:D=N:T=7711:B=0:DD=];\",\n        }\n\n        // this make able the corner placement for all UI elements inside\n        this.container_d3.style('position', 'relative')\n\n        // remove previous placeholder & UI\n        this.container_d3.selectAll(\".corner_placeholder\").remove()\n        this.container_d3.selectAll(\".modal_data\").remove()\n        this.remove_scale()\n        this.remove_all_color_legend()\n        this.container_d3.selectAll(\".menu_settings\").remove()\n        this.container_d3.selectAll(\".empty_message\").remove()\n        this.container_d3.select('#histogram-legend').remove();\n\n        // remove old meta modal with document. function\n        document.querySelectorAll('#modal_meta_' + this.container_object.uid).forEach((el) => { el.remove() })\n        document.querySelectorAll('#exampleModal' + this.container_object.uid).forEach((el) => { el.remove() })\n\n        this.container_d3.select(\"#menu-node\").remove()\n\n/*\n        if (phylo.phylo_embedded &&  !empty_mode){\n\n                tooltip_object[0].hide()\n                tooltip_object[3].hide()\n\n\n        }\n\n\n */\n\n\n        if (empty_mode){\n            this.top_left = this.add_top_left_container()\n            this.add_data_icon()\n            this.add_empty_message()\n            return\n        }\n\n        // Create corner placeholder for UI elements\n        this.bottom_left = this.add_bottom_left_container()\n        this.bottom_right = this.add_bottom_right_container()\n        this.top_left = this.add_top_left_container()\n        this.top_right = this.add_top_right_container()\n\n        // BOTTOM LEFT\n        if (this.viewer.model.settings.use_branch_lenght) {\n            this.scale_text = this.add_scale()\n        }\n        this.loader = this.bottom_left.append('text').style('color', 'red').style('font-size', 'small')\n        if (this.container_object.message_loader){\n            this.update_loader_message()\n        }\n        //this.add_root_badge()\n\n        // BOTTOM RIGHT\n\n        if (this.viewer.model.big_tree){\n            this.add_rescale_zoom()\n        }\n        this.add_maximise()\n        this.add_fit_height()\n        this.add_zoom()\n\n        // TOP LEFT\n        if (!this.api.settings.phylostratigraphy) {\n            if (this.container_object.models.length > 0) {\n                this.add_toggle()\n            }\n            this.add_data_icon()\n        }\n\n        // TOP RIGHT\n        this.add_search()\n        this.add_export()\n        this.add_meta()\n        this.add_settings()\n        this.add_undo()\n        this.add_redo()\n\n\n\n        // COLOR LEGEND\n        if (this.api.settings.compareMode || (this.viewer.model.settings.style.color_accessor['node'] !== null && this.viewer.model.settings.style.color_accessor['node'] !== 'Topology'  )){\n            this.add_color_legend('node')\n        }\n\n\n        if (this.viewer.model.settings.style.color_accessor['leaf'] !== null && !this.viewer.model.settings.sync_coloring){\n\n            this.viewer.model.set_color_scale('leaf', this.api)\n            this.add_color_legend('leaf')\n        }\n\n        if (this.viewer.model.settings.style.color_accessor['circle'] !== null){\n\n            this.viewer.model.set_color_scale('circle', this.api)\n            this.add_color_legend('circle')\n        }\n\n        // Add Stack\n        if (this.viewer.model.settings.has_histogram_data && this.viewer.model.settings.show_histogram){\n\n            this.add_histogram_legend();\n\n        }\n\n    }\n\n    // MODAL\n\n    add_modal_edit_label(node, type){\n\n        var mod_html =  `\n            <div class=\"modal\" id=\"exampleModal_edit\" tabindex=\"-1\">\n                <div class=\"modal-dialog modal-dialog-centered modal-lg\">\n                    <div class=\"modal-content\">\n                    \n                    <div class=\"modal-header\" style=\"height: 128px;border:none !important\">\n                    <h3 class=\"modal-title\" id=\"exampleModalLabel\" style=\"margin: auto; text-align: center\">\n                    <b>Edit Label</b> <br>\n                    \n        \n                    </h3>\n                    \n                  </div>\n            \n                        <div class=\"modal-body\" style=\"background-color: #f8f9fa; padding: 24px 48px;\">\n                        \n                        \n               \n                                <input type=\"text\" id=\"inputPassword6\" class=\"form-control mx-sm-3\" value=\"123456789\">\n                               \n                    \n            \n              \n                      \n                            </div>\n                            \n                            \n                            <div class=\"modal-footer\">\n        <button type=\"button\" class=\"btn btn-primary\" id=\"edit_modal_save\">Save changes</button>\n        <button type=\"button\" class=\"btn btn-secondary\" id=\"edit_modal_close\" data-dismiss=\"modal\">Close</button>\n      </div>\n                            \n                            \n                        </div>\n\n                    </div>\n                </div>\n            </div>\n`\n\n        if (type == 'Default' || type == false){\n            mod_html = mod_html.replace('123456789', node.data.name)\n        }\n        else{\n            mod_html = mod_html.replace('123456789', node.data.extended_informations[type])\n        }\n\n        document.getElementById(this.container_object.div_id).insertAdjacentHTML('afterend',mod_html)\n\n        document.getElementById('edit_modal_save').addEventListener('click', () => {\n\n\n            if (type == 'Default' || type == false){\n                node.data.name = document.getElementById('inputPassword6').value;\n            }\n            else{\n                node.data.extended_informations[type] = document.getElementById('inputPassword6').value;\n            }\n\n\n\n            this.viewer.build_d3_cluster()\n            this.viewer.render(node)\n\n            document.getElementById('exampleModal_edit').remove()\n            document.getElementsByClassName('modal-backdrop')[0].remove()\n\n        })\n\n\n        document.getElementById('edit_modal_close').addEventListener('click', () => {\n            document.getElementById('exampleModal_edit').remove();\n            document.getElementsByClassName('modal-backdrop')[0].remove()\n        })\n\n\n    }\n\n    // PLACEHOLDER\n    add_bottom_left_container() {\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder bottom left\")\n            .style(\"flex-direction\",  \"column\")\n    }\n    add_bottom_right_container(){\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder bottom right\")\n            .style(\"flex-direction\",  \"column\")\n            .style( \"align-items\", \"flex-end\")\n    }\n    add_top_left_container(){\n        return this.container_d3.append(\"div\")\n            .attr(\"class\",\"corner_placeholder top left\")\n    }\n    add_top_right_container(){\n        var div =  this.container_d3.append(\"div\").attr(\"class\",\"corner_placeholder top right\")\n            .style(\"flex-direction\",'column')\n            .style(\"align-items\",'end')\n\n        this.tr_buttons = div.append(\"div\").attr(\"class\",\"tr-button\").style(\"display\",'flex')\n\n        this.tr_menus = div.append(\"div\").attr(\"class\",\"tr-menus\")\n\n        return div\n    }\n\n    update_loader_message(){\n        this.loader.text(this.container_object.message_loader)\n    }\n\n\n    add_histogram_legend() {\n\n\n        d3__WEBPACK_IMPORTED_MODULE_1__.select('#histogram-legend').remove();\n\n        var width = 230;\n        var height = 80;\n        var svgHeight = height + 25;\n        var legendRectSize = 20;\n        var left_margin = 25;\n        var top_margin = 50;\n\n        if (this.api.settings.phylostratigraphy){\n            top_margin = 25;\n        }\n\n        var legendTxtSize = 13;\n        // center text in the middle of the legend colored rectangle, rounding it to smaller Y-value\n        var legendTxtYPadding = (legendRectSize + legendTxtSize) / 2\n\n        if(this.viewer.model.settings.stack.type == \"genes\"){\n            var dataLabels = [\"Gained\", \"Duplicated\", \"Retained\", \"Lost\" ]\n        } else {\n            var dataLabels = [\"Gains\", \"Duplications\", \"Losses\" ]\n        }\n\n        // to position legends correctly\n        var rects = dataLabels.length - 1;\n\n\n        var legendSvg = this.viewer.svg.append(\"svg\")\n            .attr(\"id\", \"histogram-legend\")\n            .attr(\"x\", left_margin)\n            .attr(\"y\", top_margin)\n            .attr(\"width\", width + \"px\")\n            .attr(\"height\", svgHeight + \"px\")\n            .append(\"g\")\n\n\n        legendSvg.append(\"line\")\n            .attr(\"x1\", 0)\n            .attr(\"y1\", rects * legendRectSize)\n            .attr(\"x2\", 200)\n            .attr(\"y2\", rects * legendRectSize)\n            .attr(\"class\", \"divline\")\n            .attr(\"stroke-width\", 2)\n            .attr(\"stroke\", \"black\");\n\n        legendSvg.selectAll('rect')\n            .data(dataLabels)\n            .enter()\n            .append('rect')\n            .attr('x', 110)\n            .attr('y', function(d, i){\n                return i * legendRectSize;\n            })\n            .attr('width', legendRectSize)\n            .attr('height', legendRectSize)\n            .attr('fill', (d, i, node) => {\n                return this.viewer.settings.stack.colorMap[d];\n            });\n\n        legendSvg.selectAll('text')\n            .data(dataLabels)\n            .enter()\n            .append('text')\n            .text(function(d){\n                return d;\n            })\n            .attr('x', 110 + legendRectSize + 5)\n            .attr('y', function(d, i){\n                return i * legendRectSize + legendTxtYPadding;\n            })\n            .attr('text-anchor', 'start')\n            .attr('alignment-baseline', 'baseline')\n            .attr(\"font-size\", legendTxtSize).attr(\"stroke\", \"black\");\n\n\n        legendSvg\n            .append('text')\n            .attr(\"class\", \"legendGeneTotal\")\n            .text(\"Total # of \"+this.viewer.model.settings.stack.type)\n            .attr('x', 0)\n            .attr('y', rects * legendRectSize - 5)\n            .attr('text-anchor', 'start')\n            .attr(\"font-size\", legendTxtSize).attr(\"stroke\", \"black\");\n\n        d3__WEBPACK_IMPORTED_MODULE_1__.selectAll(\".legendGeneTotal\").moveToFront();\n\n    }\n\n    // DATA ICON\n\n    get_modal_adder_corpus(){\n        return `\n        \n         <div class=\"container-fluid\">\n                                \n                <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 1: Add data from text or file</b> </h5>\n                  \n                  \n                  <div class=\"row\" style=\" margin-left: 24px\">\n                        <div class=\"col\" >\n                            <textarea class=\"form-control\" placeholder=\"Paste or type your tree here\" id=\"exampleFormControlTextarea1s\" rows=\"3\"></textarea>\n\n\n                        </div>\n                        <div class=\"col-1 my-auto \"><p class=\"align-middle\" style=\"margin: 0px;\"><b>OR</b></p></div>\n                        <div class=\"col my-auto\">\n\n                            <div class=\"input-group mb-3\" style=\"padding-left: 24px;\">\n                                <input class=\"form-control\" type=\"file\" id=\"add_tree_file_input\">                                    <div class=\"input-group-append\">\n                            </div>\n                            </div>\n\n\n                        </div>\n                    </div>\n\n                   <div class=\"row\" style=\"margin-left: 24px\">\n                        <div class=\"col\" >\n                            <h6 class=\"card-subtitle mb-2 text-muted\" style=\"margin-top: 6px\"><small>Example: <a href=\"#\" class=\"t1\">tree #1</a>, <a href=\"#\" class=\"t2\">tree #2</a>, <a href=\"#\" class=\"tbig\">big tree</a>, <a href=\"#\" class=\"nhx_ex\">Extended Newick</a>.</small></h6>\n                        </div>\n                    </div>\n                        \n                </div>\n\n         \n                </div>\n                \n                 <br>\n                 \n                 <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 2: Choose tree data format </b> </h5>\n                  \n                  \n                  <div class=\"text-center\">\n\n                        <select class=\"custom-select\" id=\"add_tree_str_select\" style=\"margin-left: 24px;\">\n                            <option selected value=\"newick\">Newick</option>\n                            <option value=\"nhx\">Extended Newick</option>\n                            <option value=\"phyloxml\">PhyloXML</option>\n                        </select>\n\n\n                    </div>\n                    \n                     <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                      <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"internal_for_branch\" >\n                      <label class=\"form-check-label\" for=\"flexCheckDefault\">\n                        Use internal label for branches (e.g. boostrap values)\n                      </label>\n                    </div>\n                    \n                \n                    \n                </div>\n\n         \n                </div>\n                \n                <br>\n                \n                \n                \n                <div class=\"card\">\n    <div class=\"card-body\">\n        <div style=\"cursor: pointer;\" id=\"toggleStep3\">\n            <h5>\n                <b>Step 3 (Optional): Add a mapping file</b>\n                <a href=\"#\" id=\"menu_help_add_tree\">\n                    <i class=\"bi-question-circle\"></i>\n                </a>\n                <i class=\"bi-caret-down float-end\" id=\"caretStep3\"></i>\n                <small class=\"float-end\" id=\"expandStep3\">Expand</small>\n            </h5>\n        </div>\n        <br>\n        <div id=\"collapseStep3\" style=\"display: none;\">\n            STEP3__\n        </div>\n    </div>\n</div>\n                  \n                <br>\n                 \n                 <div style=\"margin: auto; width: fit-content;\">\n                \n                \n                 <button type=\"button\"  class=\"btn  btn-danger\" data-bs-dismiss=\"modal\">Cancel</button>\n                  <button type=\"button\" id=\"modal_add_tree_final_button\" class=\"btn  btn-success\"  data-bs-dismiss=\"modal\" >Upload tree</button>\n                \n                  </div>\n                \n        </div>\n        \n                    \n                \n        `\n\n\n    }\n\n    add_data_icon() {\n\n        this.container_d3.select(\"#exampleModal\" + this.container_object.uid).remove()\n\n        var b = this.top_left.append('button')\n            .attr('class', '  dashed_button')\n            .attr('id', 'buttonmodal_' + this.container_object.div_id)\n            .attr('data-bs-toggle', 'modal')\n            .attr('data-bs-target', '#exampleModal' + this.container_object.uid)\n            .attr('data-bs-placement', 'right')\n            .attr('title', 'Add a new tree')\n            .append(\"div\")\n            .attr(\"class\", \"label\")\n\n        b.html(\"  <i class='bi bi-plus' style='color:#888'></i> Add tree\")\n\n        let mod_html = this.get_modal_template()\n\n        mod_html = mod_html.replace('TEMPLATE_CORPUS', this.get_modal_adder_corpus())\n        mod_html = mod_html.replace('TITLE_', 'Upload your tree')\n        mod_html = mod_html.replace('SUB_TITLE_', '')\n        mod_html = mod_html.replace('STEP3__', this.get_modal_meta_corpus())\n\n\n        mod_html = mod_html.replace('exampleFormControlTextarea1s', 'exampleFormControlTextarea1s' + this.container_object.uid)\n        mod_html = mod_html.replace('add_tree_file_input', 'add_tree_file_input' + this.container_object.uid)\n        mod_html = mod_html.replace('exampleModal', 'exampleModal' + this.container_object.uid)\n        mod_html = mod_html.replace('add_tree_str_select', 'add_tree_str_select' + this.container_object.uid)\n        mod_html = mod_html.replace('internal_for_branch', 'internal_for_branch' + this.container_object.uid)\n        mod_html = mod_html.replace('modal_add_tree_final_button', 'modal_add_tree_final_button' + this.container_object.uid)\n        mod_html = mod_html.replace('upload_mapping_close', 'upload_mapping_close' + this.container_object.uid)\n        mod_html = mod_html.replace('upload_mapping_validation', 'upload_mapping_validation' + this.container_object.uid)\n\n        // META CORPUS\n\n        mod_html = mod_html.replaceAll('add_meta_file_input', 'tree_adder_modal_add_mapping_file_input' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2', 'tree_adder_mod_meta_card2_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card3', 'tree_adder_mod_meta_card3_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2_radio', 'tree_adder_mod_meta_card2_radio' + this.container_object.uid)\n\n        mod_html = mod_html.replace('flexCheckChecked', 'tree_adder_flexCheckChecked' + this.container_object.uid)\n        mod_html = mod_html.replace('flexCheckDefault', 'tree_adder_flexCheckDefault' + this.container_object.uid)\n\n        mod_html = mod_html.replace('mapping_check_nodes', 'tree_adder_mapping_check_nodes' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_leaf', 'tree_adder_mapping_check_leaf' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_apply_to_all', 'tree_adder_mapping_apply_to_all' + this.container_object.uid)\n\n\n        mod_html = mod_html.replaceAll('add_mapping_ref_select', 'add_mapping_ref_select' + this.container_object.uid)\n\n        mod_html = mod_html.replace('collapseStep3', 'collapse3' + this.container_object.uid)\n        mod_html = mod_html.replace('toggleStep3', 'toggle3' + this.container_object.uid)\n        mod_html = mod_html.replace('caretStep3', 'caret3' + this.container_object.uid)\n        mod_html = mod_html.replace('expandStep3', 'expand3' + this.container_object.uid)\n\n\n        document.getElementById(this.container_object.div_id).insertAdjacentHTML('afterend', mod_html)\n\n        // Add code for the toggle functionality\n\n        const toggleElement = document.getElementById('toggle3' + this.container_object.uid);\n        const contentElement = document.getElementById('collapse3' + this.container_object.uid);\n        const caretElement = document.getElementById('caret3'  + this.container_object.uid);\n        const expandTextElement = document.getElementById('expand3' + this.container_object.uid);\n\n        toggleElement.addEventListener('click', () => {\n            const isHidden = contentElement.style.display === 'none';\n            contentElement.style.display = isHidden ? 'block' : 'none';\n            caretElement.className = isHidden ? 'bi-caret-up float-end' : 'bi-caret-down float-end';\n            expandTextElement.textContent = isHidden ? 'Collapse' : 'Expand';\n        });\n\n\n\n        var modmod = document.getElementById('exampleModal' + this.container_object.uid);\n\n        var thaty = this\n\n        const add_tree_helpers = function (container_object, str, format, mapping) {\n\n            var mapping = (typeof mapping == 'undefined') ? false : mapping;\n\n            container_object.add_tree(str, {'data_type': format})\n            container_object.current_model = container_object.models.length - 1\n\n            // check if internal_for_branch is checked or not and setup default_internal_label_is_for_branch\n\n            if (document.getElementById('internal_for_branch' + container_object.uid).checked) {\n                container_object.models[container_object.current_model].settings.edge_related_data.push('Data');\n            }\n\n            if (mapping !== false) {\n\n                if (mapping.parameters.apply_to_all) {\n\n                    // apply add_meta_leaves to all models in the container\n                    container_object.models.forEach((model) => {\n\n                        model.settings.use_meta_for_leaf = mapping.parameters.use_meta_for_leaf\n                        model.settings.use_meta_for_node = mapping.parameters.use_meta_for_node\n\n                        if (mapping.parameters.use_meta_for_leaf) {\n                            model.add_meta_leaves(mapping.meta, mapping.parameters.headers, container_object.api, mapping.parameters.reference)\n                        }\n                        if (mapping.parameters.use_meta_for_node) {\n                            model.add_meta_nodes(mapping.meta, mapping.parameters.headers, container_object.api, mapping.parameters.reference)\n                        }\n\n\n                    })\n\n                }\n                else {\n\n                    let moddy = container_object.models[container_object.current_model]\n\n                    moddy.settings.use_meta_for_leaf = mapping.parameters.use_meta_for_leaf\n                    moddy.settings.use_meta_for_node = mapping.parameters.use_meta_for_node\n\n                    if (moddy.settings.use_meta_for_leaf) {\n                        moddy.add_meta_leaves(mapping.meta, mapping.parameters.headers, container_object.api, mapping.parameters.reference)\n                    }\n\n                    if (moddy.settings.use_meta_for_node) {\n                        moddy.add_meta_nodes(mapping.meta, mapping.parameters.headers, container_object.api, mapping.parameters.reference)\n                    }\n\n\n                }\n\n\n            }\n\n\n            document.querySelector('#exampleModal' + container_object.uid).style.display = 'none'\n            document.querySelectorAll('.modal-backdrop').forEach(elem => {\n                elem.parentNode.removeChild(elem);\n            });\n            container_object.viewer.set_data(container_object.models[container_object.current_model]);\n            container_object.api.stop_all_workers()\n            container_object.compute_topology_and_render_bounded_viewer()\n            container_object.viewer.render(container_object.viewer.hierarchy);\n            //container_object.viewer.update_collapse_level(container_object.models[container_object.current_model].settings.collapse_level)\n\n            if (mapping) {\n                thaty.open_color_settings()\n            }\n\n\n            if (thaty.api.settings.compute_distance && thaty.api.bound_container.includes(thaty)) {\n                thaty.api.send_worker_distance()\n            }\n        }\n\n        const add_data_from_modal = (format) => {\n\n            // mapping information\n            var mapping_file = document.getElementById('tree_adder_modal_add_mapping_file_input' + that.container_object.uid).files[0];\n\n\n            let s = document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value\n\n            if (s.length > 0) {\n\n                if (mapping_file) {\n\n                    var parameters = that.get_mapping_parameter_from_UI(true)\n\n\n                    const reader = new FileReader();\n\n                    reader.addEventListener('load', (event) => {\n\n                        var meta = []\n                        var ref_id = parameters.reference\n\n                        if (mapping_file.name.split('.').pop() == 'tsv') {\n                            d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {\n                                meta[d[ref_id]] = d\n                            });\n                        } else {\n                            d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {\n                                meta[d[ref_id]] = d\n                            });\n                        }\n\n\n                        add_tree_helpers(this.container_object, s, format, {'meta': meta, 'parameters': parameters})\n                        return\n\n\n                    });\n                    reader.readAsText(mapping_file);\n\n\n                } else {\n                    add_tree_helpers(this.container_object, s, format)\n                    return\n                }\n\n\n            }\n\n            var file = document.getElementById('add_tree_file_input' + this.container_object.uid).files[0];\n\n            if (file) {\n                var reader = new FileReader();\n                reader.readAsText(file, \"UTF-8\");\n                reader.onload = (evt) => {\n\n                    if (mapping_file) {\n                        var parameters = that.get_mapping_parameter_from_UI(true)\n\n                        const reader = new FileReader();\n\n                        reader.addEventListener('load', (event) => {\n\n                            var meta = []\n\n                            var ref_id = parameters.reference\n\n\n                            if (mapping_file.name.split('.').pop() == 'tsv') {\n                                d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {\n                                    meta[d[ref_id]] = d\n                                });\n                            } else {\n                                d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {\n                                    meta[d[ref_id]] = d\n                                });\n                            }\n\n                            add_tree_helpers(this.container_object, evt.target.result, format, {\n                                'meta': meta,\n                                'parameters': parameters\n                            })\n                            return\n\n\n                        });\n                        reader.readAsText(mapping_file);\n\n\n                    } else {\n                        add_tree_helpers(this.container_object, evt.target.result, format)\n                        return\n                    }\n\n\n                }\n                reader.onerror = function (evt) {\n                    console.log(\"error reading file\")\n                }\n            }\n\n\n        }\n\n        document.getElementById('modal_add_tree_final_button' + this.container_object.uid).onclick = () => {\n\n\n            var e = document.getElementById('add_tree_str_select' + this.container_object.uid);\n\n            add_data_from_modal(e.value)\n        }\n\n        modmod.getElementsByClassName('t1')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value = this.examples.small1\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('t1')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value = this.examples.small1\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('t2')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value = this.examples.small2\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('tbig')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value = this.examples.big\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'newick'\n        };\n\n        modmod.getElementsByClassName('nhx_ex')[0].onclick = () => {\n            document.getElementById(\"exampleFormControlTextarea1s\" + this.container_object.uid).value = this.examples.nhx\n            document.getElementById('add_tree_str_select' + this.container_object.uid).value = 'nhx'\n        };\n\n\n        // META DATA UPLOADER\n        document.getElementById('upload_mapping_validation' + this.container_object.uid).style.display = 'none'\n        document.getElementById('upload_mapping_close' + this.container_object.uid).style.display = 'none'\n\n\n        var x = modmod.getElementsByClassName('card')\n        for (var i = 0; i < x.length; i++) {\n            x[i].style.border = 'none';\n        }\n\n        // Add JS for modal corpus\n        var that = this\n\n        document.getElementById('tree_adder_modal_add_mapping_file_input' + this.container_object.uid).onchange = function () {\n            let input = this.files[0];\n\n            if (input) {\n\n                document.getElementById('tree_adder_mod_meta_card2_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('tree_adder_mod_meta_card3_' + that.container_object.uid).style.display = 'block'\n\n                var reader = new FileReader();\n                var data;\n\n                reader.addEventListener(\"load\", parseFile, false);\n                reader.readAsText(input);\n\n                function parseFile() {\n\n                    // load data\n                    if (input.name.split('.').pop() == 'tsv') {\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(reader.result, function (d) {\n                            return d;\n                        });\n                    } else {\n\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(reader.result, function (d) {\n                            return d;\n                        });\n\n                    }\n\n\n                    // Get columns + types\n                    var numerisator = {}\n                    numerisator['id'] = 'cat'\n                    data['columns'].forEach((currentElement) => {\n                        if (currentElement != 'id') {\n                            numerisator[currentElement] = 'num'\n                        }\n                    })\n                    data.forEach((currentElement) => {\n                        for (var key of Object.keys(numerisator)) {\n                            if (isNaN(currentElement[key])) {\n                                numerisator[key] = 'cat'\n                            }\n                        }\n                    })\n\n\n                    // Add columns to select\n                    var select = document.getElementById('add_mapping_ref_select' + that.container_object.uid)\n                    select.innerHTML = '';\n\n                    for (var key of Object.keys(numerisator)) {\n                        var opt = document.createElement('option');\n                        opt.value = key;\n                        opt.innerHTML = key;\n                        select.appendChild(opt);\n                    }\n\n\n                    // creates radios\n                    var radio_container = document.getElementById('tree_adder_mod_meta_card2_radio' + that.container_object.uid)\n                    radio_container.innerHTML = '';\n\n                    var get_el = function () {\n                        return `\n                        \n                            <div  style = \"padding: 12px 24px 0;\">  <span><b style = \"margin-right: 12px\" > Column:  </b> \"NAME_\"</span>  <br>\n\n                    <div class=\"form-check \" style=\"margin-left: 24px\" >\n                        <input class=\"form-check-input \" name=\"flexRadioDefault\"   type=\"radio\" value=\"num\" id=\"RADIO_1\" ATTR_NUM>\n                            <label class=\"form-check-label\" for=\"RADIO_1\">\n                                Numerical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check \" style=\"margin-left: 24px\"  >\n                        <input class=\"form-check-input\"   name=\"flexRadioDefault\" type=\"radio\" value=\"cat\" id=\"RADIO_2\" ATTR_CAT>\n                            <label class=\"form-check-label\" for=\"RADIO_2\">\n                                Categorical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check\" style=\"margin-left: 24px\">\n                        <input class=\"form-check-input\"  name=\"flexRadioDefault\" type=\"radio\" value=\"color\" id=\"RADIO_3\" ATTR_COLOR>\n                            <label class=\"form-check-label\" for=\"RADIO_3\">\n                                Color\n                            </label>\n                    </div>\n   \n                    \n                   \n                    \n                    \n              \n                    \n                </div>\n                        `\n                    }\n\n                    // clean potential old radiobox\n\n                      for (var key of Object.keys(numerisator)) {\n\n                        var rad = get_el()\n\n\n                        rad = rad.replace('NAME_', key)\n                        rad = rad.replaceAll('flexRadioDefault', 'tree_adder_flexRadioDefault_' + key + that.container_object.uid)\n                        rad = rad.replace('RADIO_1', that.container_object.uid + 'mapping_header_radiotree_adder_1' + '__' + key)\n                        rad = rad.replace('RADIO_2', that.container_object.uid + 'mapping_header_radiotree_adder_2' + '__' + key)\n                        rad = rad.replace('RADIO_3', that.container_object.uid + 'mapping_header_radiotree_adder_3' + '__' + key)\n\n\n                        if (numerisator[key] == 'num') {\n                            rad = rad.replace('ATTR_NUM', 'checked')\n                            rad = rad.replace('ATTR_CAT', '')\n                            rad = rad.replace('ATTR_COLOR', '')\n                        }\n                        if ((0,_utils__WEBPACK_IMPORTED_MODULE_3__.check_if_color)(key)) {\n                            rad = rad.replace('ATTR_NUM', '')\n                            rad = rad.replace('ATTR_CAT', '')\n                            rad = rad.replace('ATTR_COLOR', 'checked')\n                        } else {\n                            rad = rad.replace('ATTR_NUM', 'disabled')\n                            rad = rad.replace('ATTR_CAT', 'checked')\n                            rad = rad.replace('ATTR_COLOR', '')\n                        }\n\n\n                        radio_container.insertAdjacentHTML('beforeend', rad)\n\n                    }\n                    radio_container.insertAdjacentHTML('beforeend', '<br>')\n\n                }\n\n            }\n\n        };\n\n        document.getElementById(\"menu_help_add_tree\").onclick = function () {\n            $('#modal_help').modal('show');\n\n        };\n\n\n    }\n\n    get_modal_template() {\n        return `\n            <div class=\"modal\" id=\"exampleModal\" tabindex=\"-1\">\n                <div class=\"modal-dialog modal-dialog-centered modal-lg\">\n                    <div class=\"modal-content\">\n                    \n                    <div class=\"modal-header\" style=\"height: 128px;border:none !important\">\n                    <h3 class=\"modal-title\" id=\"exampleModalLabel\" style=\"margin: auto; text-align: center\">\n                    <b>TITLE_</b> <br>\n                    \n                    <small style=\"color:grey\">\n                    SUB_TITLE_\n            </small>\n                    </h3>\n                    \n                  </div>\n            \n                        <div class=\"modal-body\" style=\"background-color: #f8f9fa; padding: 24px 48px;\">\n            \n            \n                            TEMPLATE_CORPUS\n                          \n                            </div>\n                            \n                            \n                        </div>\n\n                    </div>\n                </div>\n            </div>\n`\n    }\n\n    open_color_settings(){\n        document.getElementsByClassName('menu_settings')[0].style.display = 'block'\n        document.getElementById('accordion_color' + this.container_object.uid).click()\n    }\n\n\n\n    // TOGGLE\n    add_toggle(){\n        var sub_div =  this.top_left.append(\"div\")\n            .style( \"display\", \"flex\")\n            .style('margin', '2px')\n\n\n        var butty_putty = sub_div.append('button')\n            .on('click', d => {return this.container_object.shift_model(-1)})\n            .attr('class', ' square_button')\n            .attr('id', 'buttontoggleleft_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Load previous tree')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-chevron-left ')\n\n        butty_putty.append('p')\n            .text('Previous')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_shiftleft = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttontoggleleft_' + this.container_object.div_id))\n\n\n\n        var stoggle = sub_div.append('div')\n            .attr('class', ' square_button screen_toggle')\n            .style('min-width', '92px')\n            .style('display', 'flex')\n            .style('align-items', 'center')\n            .style('width', 'auto')\n\n\n        var sd = stoggle.append('div')\n\n\n\n\n        sd.append(\"div\")\n            .style('cursor', 'text')\n            .attr('id', 'input_edit_name'+ this.container_object.uid)\n            .attr(\"contenteditable\",\"true\")\n            .attr(\"class\",\"label\")\n            .style('display', 'inline')\n            .text(this.viewer.model.settings.name)\n\n\n\n        var ol = sd.append(\"ul\").attr('class', \"progress-indicator\" )\n            .style('width', 'auto')\n            .style('min-width', \"50px\")\n\n        for (var i = 0; i < this.container_object.models.length; i++) {\n\n            let li = ol.append('li')\n\n            if (i == this.container_object.current_model){\n\n                li.attr('class','completed' )\n\n            }\n\n                li.append('span')\n                .attr('class','bubble' )\n\n        }\n\n\n        sub_div.append('button')\n            .attr('class', 'square_button')\n            .attr('id', 'button_edit_name_check'+ this.container_object.uid)\n            .append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#fff')\n            .attr('class', ' bi bi-check ')\n\n        sub_div.append('button')\n            .attr('class', 'square_button button_edit_name')\n            .attr('id', 'button_edit_name_trash'+ this.container_object.uid)\n            .append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#fff')\n            .attr('class', ' bi bi-trash ')\n\n\n        var butty_putty = sub_div.append('button')\n            .attr('class', ' square_button')\n            .on('click', d => { return this.container_object.shift_model(1)})\n            .attr('id', 'buttonshiftright_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Load next tree')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-chevron-right ')\n\n        butty_putty.append('p')\n            .text('Next')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_shiftright = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonshiftright_' + this.container_object.div_id))\n\n\n\n        // bind events and action to editable div\n\n        var edit_name = document.querySelector('#input_edit_name'+ this.container_object.uid);\n        var edit_name_ok = document.querySelector('#button_edit_name_check'+ this.container_object.uid);\n        var edit_name_trash = document.querySelector('#button_edit_name_trash'+ this.container_object.uid);\n\n        edit_name.addEventListener(\"keypress\",  (e) => {\n            if (e.which == 13) {\n                event.preventDefault();\n                edit_name_ok.style.display = 'none';\n                edit_name_trash.style.display = 'none';\n                var old_name = this.viewer.model.get_name()\n\n                var undo = {'name': 'Rename tree', 'fonction_obj': this.viewer.model, 'fonct':  this.viewer.model.set_name, 'argu': [old_name]}\n                var redo = {'name': 'Rename tree', 'fonction_obj': this.viewer.model, 'fonct':  this.viewer.model.set_name, 'argu': [edit_name.textContent]}\n                this.container_object.add_action(undo, redo, true)\n\n                this.viewer.model.set_name(edit_name.textContent)\n                return false;\n            }\n\n\n            //You can add delete key event code as well over here for windows users.\n            //if(edit_name.textContent.length === 40 && e.keyCode != 8) {\n            //    e.preventDefault();\n            //}\n        });\n\n        edit_name.addEventListener('focus', (event) => {\n            edit_name_ok.style.display = 'inline';\n            edit_name_trash.style.display = 'inline';\n        });\n\n        edit_name.addEventListener('blur', (event) => {\n            setTimeout(() =>  {\n                edit_name_ok.style.display = 'none';\n                edit_name_trash.style.display = 'none';\n                edit_name.textContent = this.viewer.model.get_name()\n            }, 300);\n\n        });\n\n\n        edit_name_trash.addEventListener('click', (event) => {\n            this.container_object.remove_current_tree(true)\n\n        });\n\n        edit_name_ok.addEventListener('click', (event) => {\n            var old_name = this.viewer.model.get_name()\n\n            var undo = {'name': 'Rename tree', 'fonction_obj': this.viewer.model, 'fonct':  this.viewer.model.set_name, 'argu': [old_name]}\n            var redo = {'name': 'Rename tree', 'fonction_obj': this.viewer.model, 'fonct':  this.viewer.model.set_name, 'argu': [edit_name.textContent]}\n            this.container_object.add_action(undo, redo, true)\n\n            this.viewer.model.set_name(edit_name.textContent)\n\n        });\n\n\n\n\n    }\n\n    add_rescale_zoom(){\n\n        var butty_putty =   this.bottom_right.append('button')\n            .on('click', d => {\n\n                this.viewer.force_zoom_rescaling = true;\n                this.viewer.zoomed( {'transform':this.viewer.d3.zoomTransform(this.viewer.svg.node())});\n                this.viewer.force_zoom_rescaling = false;\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'buttonscaleviewer_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Optimise text size')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-fonts ')\n\n        butty_putty.append('p')\n            .text('Optimise text')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonscaleviewer_' + this.container_object.div_id))\n\n    }\n\n    add_fit_height() {\n\n        var butty_putty = this.bottom_right.append('button')\n            .on('click', d => {\n                this.viewer.fit_to_viewer_height()\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'buttonfitviewer_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Optimise view (possible collapse/expand)')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-arrows-angle-contract ')\n\n        butty_putty.append('p')\n            .text('Optimise view')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonfitviewer_' + this.container_object.div_id))\n\n    }\n\n    add_maximise() {\n\n        var butty_putty=  this.bottom_right.append('button')\n            .on('click', d => {\n                this.viewer.maximise_zoom()\n            })\n            .attr('class', ' square_button')\n            .attr('id', 'button_maximise_zoom_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Fit tree into viewer (no collapse/expand)')\n            .style('margin', '2px')\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-arrows-fullscreen ')\n\n        butty_putty.append('p')\n            .text('Fit screen')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_fitviewer = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_maximise_zoom_' + this.container_object.div_id))\n\n    }\n\n    // BADGE ROOTING\n    add_root_badge() {\n\n\n\n        this.bottom_left.append('button')\n            .attr('class', ' square_button')\n            .style('padding', '4px')\n            .style('margin', '2px')\n            .style('cursor', 'default')\n            .style('color', 'white')\n            .style('background', 'rgb(136, 136, 136)')\n            .append(\"div\")\n            .on('click', d => { return this.container_object.toggle_rooting()})\n            .attr(\"class\", \"label\")\n            .append('small')\n            .html(this.viewer.model.rooted ? 'Rooted Tree <i class=\\\"bi bi-sync-alt\\\"></i>' : 'Unrooted Tree <i class=\\\"bi bi-sync-alt\\\"></i> ')\n    }\n\n    // ZOOM\n    add_zoom(){\n\n        var butty_putty =this.bottom_right.append('button')\n            .on('click', d => {return this.viewer.zoom_in()})\n            .attr('class', ' square_button')\n            .attr('id', 'buttonzoomplus_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Zoom in')\n            .style('margin', '2px')\n\n\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-zoom-in ')\n\n        butty_putty.append('p')\n            .text('Zoom in')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_zoomplus = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonzoomplus_' + this.container_object.div_id))\n\n\n        var butty_putty =  this.bottom_right.append('button')\n            .on('click', d => {return this.viewer.zoom_out()})\n            .attr('class', ' square_button')\n            .style('margin', '2px')\n            .attr('id', 'buttonzoomminus_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'left')\n            .attr('title', 'Zoom out')\n\n\n\n        butty_putty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-zoom-out ')\n\n        butty_putty.append('p')\n            .text('Zoom out')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_zoomminus = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonzoomminus_' + this.container_object.div_id))\n\n    }\n\n    // SCALE\n    add_scale(){\n\n        var scaleLineLateralPadding = 10\n        var scaleLineBottomPadding = 10\n\n\n        var gg = this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'scale')\n            .attr(\"transform\", \"translate(0,\" + (this.viewer.height - scaleLineBottomPadding)  + \")\")\n\n        gg.append(\"path\")\n            .attr(\"d\", (d) => {return \"M\" + scaleLineLateralPadding + \",20L\" + (this.scale_pixel_length)  + \",20\"})\n            .attr(\"class\", 'scale_line')\n\n\n        var scale_text = gg.append(\"text\")\n            .attr(\"class\", 'scale_text')\n            .attr(\"x\", this.scale_pixel_length/2)\n            .attr(\"y\", 10)\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'middle')\n            .attr(\"dy\", \".2em\")\n            .text(d => {return this.compute_scale()})\n\n\n        return scale_text\n\n\n\n    }\n    remove_scale(){this.container_d3.select(\".scale\").remove()}\n\n    update_scale_value(zoom_scale){\n        this.scale_text.text(this.compute_scale(zoom_scale))\n\n    }\n\n    compute_scale(zoom_scale){\n        var zoom_scale = zoom_scale || 1;\n        return (this.viewer.scale_branch_length.invert(this.scale_pixel_length)/zoom_scale).toFixed(4);\n    }\n\n    //COLORING\n    add_color_legend(type){\n\n\n        var type = (typeof type !== 'undefined') && (type != 'both') ? type : 'node';\n\n        var tt = this.viewer.model.settings.extended_data_type[this.viewer.model.settings.style.color_accessor[type]]\n        var acc = this.viewer.model.settings.style.color_accessor[type];\n\n        if ( tt === 'cat' || tt === 'color'){return}\n\n        this.container_d3.select(\".colorlegend_\" + type).remove()\n\n        let top_padding = 16;\n        let left_padding = 16;\n        let width = 16;\n        let height = 100;\n        let gutter = 8;\n        let rect_height = height/100;\n\n        var offset = type == 'node' ? (this.viewer.height/2) + 30 : type == 'leaf' ? this.viewer.height/2-height - 10 : this.viewer.height/2 - 2*height - 40;\n\n        let gg = this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'colorlegend_' + type)\n\n\n        var values = []\n\n        if (this.viewer.model.settings.intercolor[type]) {\n            for (let i = 0; i < 100; i++) {\n                let n = this.viewer.model.settings.intercolor[type]((i / 100).toFixed(2));\n                values.push(this.viewer.model.settings.colorScale[type](n));\n            }\n        }\n\n            gg.selectAll(\"rect\")\n            .data(values)\n            .join(\"rect\")\n            .attr(\"x\", left_padding)\n            .attr(\"y\", (d, i) => offset + i)\n            .attr(\"width\", width)\n                .attr(\"height\", rect_height)\n            .attr(\"fill\", d => d);\n\n        gg.append(\"text\")\n            .attr(\"x\", left_padding + width + gutter )\n            .attr(\"y\", offset - 6 )\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'start')\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n\n                if (ms.color_accessor[type]){\n                    var n = ms.color_extent_max[type][ms.color_accessor[type]];\n                    return Number.isInteger(n) ? n : parseFloat(n).toFixed(3);\n\n                }\n                return 1\n                })\n\n        gg.append(\"text\")\n            .attr(\"x\", left_padding + width + gutter )\n            .attr(\"y\", offset + height + 10 )\n            .attr(\"fill\", \"#555\")\n            .attr('text-anchor', 'start')\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n\n                if (ms.color_accessor[type]){\n\n                    var n;\n\n                    if (ms.color_extent_max[type][ms.color_accessor[type]] == ms.color_extent_min[type][ms.color_accessor[type]]){\n                        n = ms.color_extent_min[type][ms.color_accessor[type]]-1;\n                    }else{\n                        n = ms.color_extent_min[type][ms.color_accessor[type]];\n                    }\n\n\n                    return Number.isInteger(n) ? n : parseFloat(n).toFixed(3);\n\n                }\n                return 0\n            })\n\n\n        var xx =  gutter\n        var yy =  offset\n\n        yy +=  type == 'node' ? 5 : height;\n\n        gg.append(\"text\")\n            .attr(\"fill\", \"#555\")\n            .attr('transform', \"translate(\"+xx+\", \" +yy+ \")rotate(-90)\")\n            .attr('text-anchor', () => {return type == 'node' ? 'end' : 'start'})\n            .attr(\"dy\", \".2em\")\n            .text(() => {\n                var ms = this.viewer.model.settings.style;\n                return ms.color_accessor[type] ? ms.color_accessor[type] : \"Topology\"\n\n\n            })\n\n    }\n\n    remove_color_legend(type){\n        type = type == 'both' ? 'node' : type\n        this.container_d3.select(\".colorlegend_\" + type).remove()\n    }\n\n    remove_all_color_legend(){\n        this.container_d3.selectAll(\".colorlegend_node\").remove()\n        this.container_d3.selectAll(\".colorlegend_leaf\").remove()\n        this.container_d3.selectAll(\".colorlegend_circle\").remove()\n    }\n\n    // SEARCH\n\n    autocomplete(inp, arr) {\n\n        var that = this\n\n\n        /*the autocomplete function takes two arguments,\n        the text field element and an array of possible autocompleted values:*/\n        var currentFocus;\n        /*execute a function when someone writes in the text field:*/\n\n        inp.addEventListener(\"input\", function(e) {\n\n\n\n            var a, b, i, val = this.value;\n            /*close any already open lists of autocompleted values*/\n            closeAllLists();\n            if (!val) { return false;}\n            currentFocus = -1;\n            /*create a DIV element that will contain the items (values):*/\n            a = document.createElement(\"DIV\");\n            a.setAttribute(\"id\", this.id + \"autocomplete-list\");\n            a.setAttribute(\"class\", \"autocomplete-items\");\n            /*append the DIV element as a child of the autocomplete container:*/\n            this.parentNode.appendChild(a);\n            /*for each item in the array...*/\n            for (i = 0; i < arr.length; i++) {\n                if (arr[i].toUpperCase().includes(val.toUpperCase()) ){\n                //if (arr[i].substr(0, val.length).toUpperCase() === val.toUpperCase()) {\n                    /*create a DIV element for each matching element:*/\n                    b = document.createElement(\"DIV\");\n                    /*make the matching letters bold:*/\n                    var start_index = arr[i].toUpperCase().indexOf(val.toUpperCase())\n                    b.innerHTML += arr[i].substr(0, start_index);\n                    b.innerHTML += \"<strong>\" + arr[i].substr(start_index,  val.length) + \"</strong>\";\n                    b.innerHTML += arr[i].substr(start_index + val.length);\n                    /*insert a input field that will hold the current array item's value:*/\n                    b.innerHTML += \"<input type='hidden' value='\" + arr[i] + \"'>\";\n                    /*execute a function when someone clicks on the item value (DIV element):*/\n                    b.addEventListener(\"click\", function(e) {\n                        /*insert the value for the autocomplete text field:*/\n                        that.dismiss_blur = true\n                        inp.value = this.getElementsByTagName(\"input\")[0].value;\n\n                        //document.getElementById('buttonsearch_' + this.container_object.div_id ).focus();\n                        that.container_object.highlight_node(inp.value)\n\n                        //that.viewer.maximise_zoom()\n\n                        /*close the list of autocompleted values,\n                        (or any other open lists of autocompleted values:*/\n                        closeAllLists();\n                    });\n                    a.appendChild(b);\n                }\n            }\n        });\n        /*execute a function presses a key on the keyboard:*/\n        inp.addEventListener(\"keydown\", function(e) {\n            var x = document.getElementById(this.id + \"autocomplete-list\");\n            if (x) x = x.getElementsByTagName(\"div\");\n            if (e.keyCode == 40) {\n                /*If the arrow DOWN key is pressed,\n                increase the currentFocus variable:*/\n                currentFocus++;\n                /*and and make the current item more visible:*/\n                addActive(x);\n            } else if (e.keyCode == 38) { //up\n                /*If the arrow UP key is pressed,\n                decrease the currentFocus variable:*/\n                currentFocus--;\n                /*and and make the current item more visible:*/\n                addActive(x);\n            } else if (e.keyCode == 13) {\n                /*If the ENTER key is pressed, prevent the form from being submitted,*/\n                e.preventDefault();\n                if (currentFocus > -1) {\n                    /*and simulate a click on the \"active\" item:*/\n                    if (x) x[currentFocus].click();\n                }\n            }\n        });\n        function addActive(x) {\n            /*a function to classify an item as \"active\":*/\n            if (!x) return false;\n            /*start by removing the \"active\" class on all items:*/\n            removeActive(x);\n            if (currentFocus >= x.length) currentFocus = 0;\n            if (currentFocus < 0) currentFocus = (x.length - 1);\n            /*add class \"autocomplete-active\":*/\n            x[currentFocus].classList.add(\"autocomplete-active\");\n        }\n        function removeActive(x) {\n            /*a function to remove the \"active\" class from all autocomplete items:*/\n            for (var i = 0; i < x.length; i++) {\n                x[i].classList.remove(\"autocomplete-active\");\n            }\n        }\n        function closeAllLists(elmnt) {\n            /*close all autocomplete lists in the document,\n            except the one passed as an argument:*/\n            var x = document.getElementsByClassName(\"autocomplete-items\");\n            for (var i = 0; i < x.length; i++) {\n                if (elmnt != x[i] && elmnt != inp) {\n                    x[i].parentNode.removeChild(x[i]);\n                }\n            }\n        }\n        /*execute a function when someone clicks in the document:*/\n        document.addEventListener(\"click\", function (e) {\n            closeAllLists(e.target);\n        });\n\n\n    }\n\n    add_search(){\n\n\n        this.container_d3.selectAll(\"#searchinp\" + this.viewer.uid).remove()\n\n        // add input\n        this.search_input =  this.tr_buttons.append('input')\n            .attr('class', '  search_input')\n            .style('display', 'none')\n            .style('height', '56px')\n            .attr('id', \"searchinp\" + this.viewer.uid )\n\n        var input_el = document.getElementById(\"searchinp\" + this.viewer.uid );\n\n        // add search button\n        var search_but = this.tr_buttons.append('button')\n            .attr('class', ' square_button search_button')\n            .attr('id', 'buttonsearch_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'search for label')\n            .style('border-top-left-radius', '8px')\n            .style('border-bottom-left-radius', '8px')\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                var display = input_el.style.display;\n\n                if (display == 'none'){\n                    let search_el = document.getElementById('buttonsearch_' + this.container_object.div_id );\n\n                    input_el.style.display = 'inline-block';\n                    search_el.style.borderTopLeftRadius =  '0px';\n                    search_el.style.borderBottomLeftRadius = '0px';\n                }\n                else{\n                    this.container_object.highlight_node(document.getElementById(\"searchinp\" + this.viewer.uid).value)\n                    //this.viewer.maximise_zoom()\n\n                    input_el.style.display = 'none';\n                    search_el.style.borderTopLeftRadius =  '8px';\n                    search_el.style.borderBottomLeftRadius = '8px';\n                    document.getElementById('searchinp' + this.viewer.uid + 'autocomplete-list').remove();\n                }\n            })\n\n\n        search_but.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', ' bi bi-search ')\n\n        search_but.append('p')\n            .text('Search')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_search = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonsearch_' + this.container_object.div_id))\n\n\n\n        let search_el = document.getElementById('buttonsearch_' + this.container_object.div_id );\n\n        this.autocomplete(document.getElementById(\"searchinp\" + this.viewer.uid ), this.viewer.model.settings.suggestions)\n\n        input_el.addEventListener(\"keyup\", ({key}) => {\n            if (key === \"Enter\") {\n                this.container_object.highlight_node(document.getElementById(\"searchinp\" + this.viewer.uid).value)\n                //this.viewer.maximise_zoom()\n            }\n        })\n\n        input_el.addEventListener(\"blur\", (e) => {\n\n            setTimeout(() => {\n\n                if (this.dismiss_blur){\n                    this.dismiss_blur = false\n\n                }\n                else{\n                    input_el.style.display = 'none';\n                    search_el.style.borderTopLeftRadius =  '8px';\n                    search_el.style.borderBottomLeftRadius = '8px';\n                    document.getElementById('searchinp' + this.viewer.uid + 'autocomplete-list').remove();\n\n                }\n            }, 200);\n\n        })\n\n\n    }\n\n    // META\n    get_modal_meta_corpus(){\n        return `\n\n        <div class=\"container-fluid\">\n                                \n                <div class=\"card\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 3.1: Select your mapping file</b> </h5>\n                  \n\n                 <div class=\"input-group mb-3\" style=\"padding: 24px 24px 0;\">\n                                <input class=\"form-control\" type=\"file\" id=\"add_meta_file_input\" > \n                           </div>\n                           \n                            <p style=\"padding: 0 24px;\"><small>\n                            <b>Accepted format:</b> .csv or .tsv with column names in the first row. Use the selector below to choose a reference column matching leaf or node names in the input file.\n                            </small></p>\n                            \n                            <div class=\"text-center\" style=\"margin-left: 48px;margin-right: 48px;\">\n                            \n                            <div class=\"form-floating\">\n                              <select class=\"form-select\" id=\"add_mapping_ref_select\" aria-label=\"Floating label select example\">\n                                <option value=\"id\" selected>id</option>\n                              </select>\n                              <label for=\"add_mapping_ref_select\">Select reference column name</label>\n                            </div>\n                            \n      \n                    </div>\n                            \n                              \n\n                        </div>\n                        \n                </div>\n\n                <br>\n                \n                <div class=\"card\" id=\"mod_meta_card2\" style=\"display: none\">\n                \n                  <div class=\"card-body\" id=\"mod_meta_card2_radio\" >\n                  \n                  <h5> <b>Step 3.2: Configure mapping data types</b> </h5>\n                  \n                  \n                         \n                       </div>\n                        \n                </div>\n                \n                <br>\n                \n                <div class=\"card\" id=\"mod_meta_card3\" style=\"display: none\">\n                \n                  <div class=\"card-body\">\n                  \n                  <h5> <b>Step 3.2: Choose a target for additional data</b> </h5>\n                  \n                <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                  <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"mapping_check_leaf\" checked>\n                  <label class=\"form-check-label\" for=\"flexCheckDefault\">\n                    Apply to leaves\n                  </label>\n                </div>\n                <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                  <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"mapping_check_nodes\" checked>\n                  <label class=\"form-check-label\" for=\"flexCheckChecked\">\n                    Apply to Nodes\n                  </label>\n                  \n                \n                  \n                  \n                </div>\n                \n                <br>\n                \n                 <h5> <b>Optional</b> </h5>\n               \n                <div class=\"form-check\" style=\"padding: 12px 48px 0;\">\n                  <input class=\"form-check-input\" type=\"checkbox\" value=\"\" id=\"mapping_apply_to_all\">\n                  <label class=\"form-check-label\" for=\"flexCheckDefault\">\n                    Apply to all trees\n                  </label>\n                </div>\n                 \n\n                        </div>\n                        \n                </div>\n                \n                <br>\n                \n                <div style=\"margin: auto; width: fit-content;\">\n                \n                  <button type=\"button\"  id=\"upload_mapping_close\"  class=\"btn  btn-danger\" data-bs-dismiss=\"modal\">Cancel</button>\n                  <button type=\"button\" id=\"upload_mapping_validation\" class=\"btn  btn-success\"  data-bs-dismiss=\"modal\" disabled >Upload mapping file</button>\n</div>\n                \n                 \n              \n               </div>\n  \n        `\n    }\n\n    add_meta(){\n\n        let mod_html = this.get_modal_template()\n\n\n        mod_html = mod_html.replace('TEMPLATE_CORPUS', this.get_modal_meta_corpus())\n        mod_html = mod_html.replace('TITLE_', 'Upload your own mapping file')\n        mod_html = mod_html.replace('SUB_TITLE_', 'to add additional information to leaves and nodes')\n\n        mod_html = mod_html.replace('exampleModal', 'modal_meta_' + this.container_object.uid)\n        mod_html = mod_html.replaceAll('add_meta_file_input', 'modal_add_mapping_file_input' + this.container_object.uid)\n\n        mod_html = mod_html.replace('mod_meta_card2', 'mod_meta_card2_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card3', 'mod_meta_card3_' + this.container_object.uid)\n        mod_html = mod_html.replace('mod_meta_card2_radio', 'mod_meta_card2_radio' + this.container_object.uid)\n\n        mod_html = mod_html.replace('flexCheckChecked', 'flexCheckChecked' + this.container_object.uid)\n        mod_html = mod_html.replace('flexCheckDefault', 'flexCheckDefault' + this.container_object.uid)\n\n        mod_html = mod_html.replace('upload_mapping_validation', 'upload_mapping_validation' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_nodes', 'mapping_check_nodes' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_check_leaf', 'mapping_check_leaf' + this.container_object.uid)\n        mod_html = mod_html.replace('mapping_apply_to_all', 'mapping_apply_to_all' + this.container_object.uid)\n\n\n        mod_html = mod_html.replaceAll('add_mapping_ref_select', 'add_mapping_ref_select_modal' + this.container_object.uid)\n\n        mod_html = mod_html.replaceAll('Step 3.1', 'Step 1')\n        mod_html = mod_html.replaceAll('Step 3.2', 'Step 2')\n\n        document.getElementById(this.container_object.div_id).insertAdjacentHTML('afterend',mod_html)\n\n        // Add JS for modal corpus\n        var that = this\n\n        document.getElementById('modal_add_mapping_file_input' + this.container_object.uid).onchange = function() {\n\n            let input = this.files[0];\n\n            if (input) {\n\n                document.getElementById('mod_meta_card2_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('mod_meta_card3_' + that.container_object.uid).style.display = 'block'\n                document.getElementById('upload_mapping_validation' + that.container_object.uid).disabled = false;\n\n\n                var reader = new FileReader();\n                var data;\n\n                reader.addEventListener(\"load\", parseFile, false);\n                reader.readAsText(input);\n                function parseFile(){\n\n                    // load data\n                    if (input.name.split('.').pop() == 'tsv'){\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(reader.result, function(d){\n                            return d;\n                        });\n                    }\n                    else{\n\n                        data = d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(reader.result, function(d){\n                            return d;\n                        });\n\n                    }\n\n\n                    // Get columns + types\n                    var numerisator = {}\n                    numerisator['id'] = 'cat'\n                    data['columns'].forEach((currentElement) => { if (currentElement != 'id'){  numerisator[currentElement] = 'num'}})\n                    data.forEach((currentElement) => {\n                        for (var key of Object.keys(numerisator)) {\n                            if (isNaN(currentElement[key])){\n                                numerisator[key] = 'cat'\n                            }\n                        }\n                    })\n\n                    // Add columns to select\n                    var select = document.getElementById('add_mapping_ref_select_modal' + that.container_object.uid)\n                    select.innerHTML = ''\n                    for (var key of Object.keys(numerisator)){\n                        var opt = document.createElement('option');\n                        opt.value = key;\n                        opt.innerHTML = key;\n                        select.appendChild(opt);\n                    }\n\n\n\n                    // creates radios\n                    var radio_container = document.getElementById( 'mod_meta_card2_radio' + that.container_object.uid)\n                    radio_container.innerHTML = ''\n\n                    var get_el = function(){return `\n                        \n                            <div  style = \"padding: 12px 24px 0;\">  <span><b style = \"margin-right: 12px\" > Column:  </b> \"NAME_\"</span>  <br>\n\n                    <div class=\"form-check \" style=\"margin-left: 24px\" >\n                        <input class=\"form-check-input \" name=\"flexRadioDefault\"   type=\"radio\" value=\"num\" id=\"RADIO_1\" ATTR_NUM>\n                            <label class=\"form-check-label\" for=\"RADIO_1\">\n                                Numerical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check \" style=\"margin-left: 24px\"  >\n                        <input class=\"form-check-input\"   name=\"flexRadioDefault\" type=\"radio\" value=\"cat\" id=\"RADIO_2\" ATTR_CAT>\n                            <label class=\"form-check-label\" for=\"RADIO_2\">\n                                Categorical\n                            </label>\n                    </div>\n                    \n                    <div class=\"form-check\" style=\"margin-left: 24px\">\n                        <input class=\"form-check-input\"  name=\"flexRadioDefault\" type=\"radio\" value=\"color\" id=\"RADIO_3\" ATTR_COLOR>\n                            <label class=\"form-check-label\" for=\"RADIO_3\">\n                                Color\n                            </label>\n                    </div>\n   \n                    \n                   \n                    \n                    \n                    \n                    \n                </div>\n                        `}\n\n                    for (var key of Object.keys(numerisator)){\n\n                        var rad = get_el()\n\n\n                        rad = rad.replace('NAME_', key)\n                        rad = rad.replaceAll('flexRadioDefault', 'flexRadioDefault_' + key +  that.container_object.uid )\n                        rad = rad.replace('RADIO_1',  that.container_object.uid + 'mapping_header_radio1' +  '__' + key )\n                        rad = rad.replace('RADIO_2',  that.container_object.uid + 'mapping_header_radio2'  + '__' + key )\n                        rad = rad.replace('RADIO_3',  that.container_object.uid + 'mapping_header_radio3'  + '__' + key )\n\n\n                        if (numerisator[key] == 'num') {\n                            rad = rad.replace('ATTR_NUM', 'checked')\n                            rad = rad.replace('ATTR_CAT', '')\n                            rad = rad.replace('ATTR_COLOR', '')\n                        }\n                        if ((0,_utils__WEBPACK_IMPORTED_MODULE_3__.check_if_color)(numerisator[key])) {\n                            rad = rad.replace('ATTR_NUM', '')\n                            rad = rad.replace('ATTR_CAT', '')\n                            rad = rad.replace('ATTR_COLOR', 'checked')\n                        }\n                        else {\n                            rad = rad.replace('ATTR_NUM', 'disabled')\n                            rad = rad.replace('ATTR_CAT', 'checked')\n                            rad = rad.replace('ATTR_COLOR', '')\n                        }\n\n\n\n                        radio_container.insertAdjacentHTML('beforeend',rad)\n\n                    }\n                    radio_container.insertAdjacentHTML('beforeend','<br>')\n\n                }\n\n            }\n\n            else {\n                document.getElementById('upload_mapping_validation' + that.container_object.uid).disabled = true;\n            }\n        };\n\n        document.getElementById('upload_mapping_validation' + this.container_object.uid).onclick = function(){\n\n\n            var file = document.getElementById('modal_add_mapping_file_input' + that.container_object.uid).files[0];\n\n            if (file) {\n\n                var parameters = that.get_mapping_parameter_from_UI()\n\n                const reader = new FileReader();\n\n                reader.addEventListener('load', (event) => {\n\n                    var meta = []\n                    var ref_id = parameters.reference\n\n                    if (file.name.split('.').pop() == 'tsv'){\n                        d3__WEBPACK_IMPORTED_MODULE_1__.tsvParse(event.target.result, (d) => {meta[d[ref_id]] = d});\n                    }\n                    else{\n                        d3__WEBPACK_IMPORTED_MODULE_1__.csvParse(event.target.result, (d) => {meta[d[ref_id]] = d});\n                    }\n\n\n\n                    if (parameters.apply_to_all){\n                        // apply add_meta_leaves to all models in the container\n                        that.container_object.models.forEach((model) => {\n\n                            model.settings.use_meta_for_leaf = parameters.use_meta_for_leaf\n                            model.settings.use_meta_for_node = parameters.use_meta_for_node\n\n                            if (parameters.use_meta_for_leaf){\n                                model.add_meta_leaves(meta, parameters.headers, that.container_object.api, parameters.reference)\n                            }\n                            if (parameters.use_meta_for_node){\n                                model.add_meta_nodes(meta, parameters.headers, that.container_object.api, parameters.reference)\n                            }\n\n\n                        })\n\n                    }\n                    else {\n\n                        that.viewer.model.settings.use_meta_for_leaf = parameters.use_meta_for_leaf\n                        that.viewer.model.settings.use_meta_for_node = parameters.use_meta_for_node\n\n                        if (that.viewer.model.settings.use_meta_for_leaf){\n                            that.viewer.model.add_meta_leaves(meta, parameters.headers, that.container_object.api, parameters.reference)\n                        }\n\n                        if (that.viewer.model.settings.use_meta_for_node){\n                            that.viewer.model.add_meta_nodes(meta, parameters.headers, that.container_object.api, parameters.reference)\n                        }\n\n\n                    }\n\n                    that.viewer.interface = new Interface(that.viewer, that.viewer.container_object)\n\n                    that.open_color_settings()\n\n                });\n                reader.readAsText(file);\n\n            }\n\n\n        }\n\n\n        // add the button\n        var ex_b = this.tr_buttons.append('button')\n            .attr('id', 'button_meta' + this.container_object.uid)\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Add additional informations to the tree')\n            .attr('data-bs-toggle', 'modal')\n            .attr('data-bs-target', '#modal_meta_' + this.container_object.uid )\n\n        var divybuty = ex_b.attr('class', ' square_button')\n            .style('margin', '2px')\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'bi bi-file-earmark-medical')\n\n        divybuty.append('p')\n            .text('Mapping')\n            .style('font-size', 'xx-small')\n\n\n    }\n\n    get_mapping_parameter_from_UI(modal){\n\n        var modal = (typeof modal == 'undefined') ? false : modal;\n\n        var p = {'headers':  {}}\n\n        if (modal){\n            var prefix = this.container_object.uid + 'mapping_header_radiotree_adder_'\n        }\n        else{\n            var prefix = this.container_object.uid + 'mapping_header_radio'\n        }\n\n        var checkies = document.querySelectorAll(`[id^=\"${prefix}\"]`);\n\n\n\n        checkies.forEach(element => {\n\n            if (element.checked) {\n                var column_type = element.value\n                var column_name = element.id.split('__').pop()\n\n\n                p['headers'][column_name] = column_type\n            }\n\n\n        });\n\n        if (modal){\n            p['use_meta_for_node'] = document.getElementById( 'tree_adder_mapping_check_nodes' + this.container_object.uid).checked\n            p['use_meta_for_leaf'] = document.getElementById( 'tree_adder_mapping_check_leaf' + this.container_object.uid).checked\n            p['apply_to_all'] = document.getElementById( 'tree_adder_mapping_apply_to_all' + this.container_object.uid).checked\n            p['reference'] = document.getElementById( 'add_mapping_ref_select' + this.container_object.uid).value\n        }\n        else{\n            p['use_meta_for_node'] = document.getElementById( 'mapping_check_nodes' + this.container_object.uid).checked\n            p['use_meta_for_leaf'] = document.getElementById( 'mapping_check_leaf' + this.container_object.uid).checked\n            p['apply_to_all'] = document.getElementById( 'mapping_apply_to_all' + this.container_object.uid).checked\n            p['reference'] = document.getElementById( 'add_mapping_ref_select_modal' + this.container_object.uid).value\n        }\n\n\n        return p\n    }\n\n    // EXPORT\n    add_export() {\n\n        // add the button\n        var ex_b = this.tr_buttons.append('button')\n            .attr('id', 'button_export' + this.container_object.uid)\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Export this tree as graphic or text file')\n\n        var divybuty = ex_b.attr('class', ' square_button')\n                .style('margin', '2px')\n                .on(\"click\", d => {\n                    if (this.menu_export.style('display') === 'none') {\n                        this.menu_settings.style(\"display\", 'none') // make it more general to all menu/button\n                        ex_b.style('background-color', '#CCC');\n                        document.getElementById(\"button_settings\" + this.container_object.uid).style.backgroundColor = 'rgba(239, 239, 239, 0.95)';\n                        return this.menu_export.style(\"display\", 'block')\n                    }\n                    ex_b.style('background-color', 'rgba(239, 239, 239, 0.95)');\n                    return this.menu_export.style(\"display\", 'none')\n                })\n\n        divybuty.append(\"div\")\n            .attr(\"class\", \"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'bi-file-earmark-arrow-up')\n\n        divybuty.append('p')\n            .text('Download')\n            .style('font-size', 'xx-small')\n\n\n        this.tooltip_export = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_export' + this.container_object.uid))\n\n\n        // add the sub menu container\n        this.menu_export = this.tr_menus.append('div')\n            .style(\"background-color\", '#aaa')\n            .attr('class', 'menu_export')\n\n\n        // ADD THE ACCORDION SYSTEM\n\n        this.menu_exportimage_b = this.menu_export.append('button').attr('class', 'accordion').text(\"Export as Graphic\")\n        this.menu_exportimage_p = this.menu_export.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"6px\")\n\n        this.export_as = this.menu_exportimage_p.append('div')\n            .style('display', 'flex')\n\n        this.export_as.append('button') // todo clean click\n            .attr('class', ' square_button')\n            .on(\"click\", d => {\n                this.screen_shot('png')\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"PNG\")\n\n\n        this.export_as.append('button')\n            .attr('class', ' square_button')\n            .on(\"click\", d => { // todo clean\n                this.screen_shot('svg')\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"SVG\")\n\n\n        this.menu_exportfile_b = this.menu_export.append('button').attr('class', 'accordion').text(\"Export as Text\")\n        this.menu_exportfile_p = this.menu_export.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"6px\")\n\n        this.export_as = this.menu_exportfile_p.append('div')\n            .style('display', 'flex')\n\n        this.export_as.append('button')\n            .attr('class', ' square_button')\n            .on(\"click\", d => {\n                this.container_object.export_as_newick()\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"Newick\")\n\n        this.export_as.append('button')\n            .attr('class', ' square_button')\n            .on(\"click\", d => {\n                this.container_object.export_as_nhx()\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"NHX\")\n\n    }\n\n    screen_shot(format) {\n\n        var svg = this.viewer.d3.select(\"#svg\" + this.viewer.uid)\n        this.addLogo(svg);\n        var name = svg.attr(\"id\");\n        var svgString = this.getSVGString(svg.node());\n\n        if(format === 'svg') {\n\n            var blob = new Blob([svgString], {\"type\": \"image/svg+xml;base64,\"+ btoa(svgString)});\n            file_saver__WEBPACK_IMPORTED_MODULE_0__.saveAs(blob, name+\".svg\");\n            svg.select(\"#exportLogo\").remove();\n\n        }\n        else if (format === 'png'){\n            var exportElement = svg.node();\n            var width = exportElement.getBoundingClientRect().width;\n            var height = exportElement.getBoundingClientRect().height;\n            this.svgString2Image(svgString, 2 * width, 2 * height, 'png', save);\n            svg.select(\"#exportLogo\").remove();\n\n            function save(dataBlob, filesize) {\n                var filename = (name) ? name+\".\" : \"\";\n                file_saver__WEBPACK_IMPORTED_MODULE_0__.saveAs(dataBlob, filename+'phylo.io.png'); // FileSaver.js function\n            }\n\n        }\n\n    }\n\n    // UNDO\n    add_undo(){\n\n        var divybuty = this.tr_buttons.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'buttonundo_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title',  d=> { return  this.container_object.history_actions.length > 0 ? 'Undo ' + this.container_object.get_last_action().name :  'Nothing to undo' })\n            .style('margin', '2px')\n           .on(\"click\", d => {\n                this.api.undoing = true;\n                var cta = this.container_object.pop_last_action();\n                cta = cta.undo\n                if (cta && typeof cta.fonct === 'function') {\n                    cta.fonct.apply(cta.fonction_obj, cta.argu);\n\n                    if (cta.refresh_interface) {\n                        let empty = this.container_object.models.length <= 0;\n                        this.container_object.interface = new Interface(this.viewer, this.container_object, empty);\n                    }\n                } else {\n                    console.error('Invalid cta or cta.fonct:', cta);\n                }\n                this.api.undoing = false;\n            })\n\n\n\n\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'bi-arrow-counterclockwise')\n\n        divybuty.append('p')\n            .text('Undo')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_undo = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonundo_' + this.container_object.div_id))\n\n    }\n\n    add_redo(){\n\n        var divybuty = this.tr_buttons.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'buttonredo_' + this.container_object.div_id )\n            .attr('data-bs-placement', 'bottom')\n            .attr('title',  d=> { return  this.container_object.history_actions.length > 0 ? 'Redo ' + this.container_object.get_last_action().redo.name :  'Nothing to redo' })\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                var cta = this.container_object.pop_redo_action();\n                cta = cta.redo\n                if (cta && typeof cta.fonct === 'function') {\n                    cta.fonct.apply(cta.fonction_obj, cta.argu);\n\n                    if (cta.refresh_interface) {\n                        let empty = this.container_object.models.length <= 0;\n                        this.container_object.interface = new Interface(this.viewer, this.container_object, empty);\n                    }\n                } else {\n                    console.error('Invalid cta or cta.fonct:', cta);\n                }\n            })\n\n        divybuty.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'bi-arrow-clockwise')\n\n        divybuty.append('p')\n            .text('Redo')\n            .style('font-size', 'xx-small')\n\n        this.tooltip_undo = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('buttonredo_' + this.container_object.div_id))\n\n    }\n\n    toggle_select_node_face(cid){\n\n        var acc = document.getElementById(\"accordion_branch\"+cid)\n\n\n        if (acc.classList.contains('active')) {\n\n            document.getElementById('selectlt' + cid).style.display = 'block';\n            document.getElementById('selectlb' + cid).style.display = 'block';\n            document.getElementById('selectr' + cid).style.display = 'block';\n\n            document.getElementById('selectlt' + cid).style.top = -90 + 'px';\n            document.getElementById('selectlb' + cid).style.top = -40 + 'px';\n            document.getElementById('selectr' + cid).style.top = -60 + 'px';\n\n            document.getElementById('selectlt' + cid).style.left = '30px';\n            document.getElementById('selectlb' + cid).style.left = '30px';\n            document.getElementById('selectr' + cid).style.left = '130px';\n\n        }\n        else{\n            document.getElementById('selectlt' + cid).style.display = 'none';\n            document.getElementById('selectlb' + cid).style.display = 'none';\n            document.getElementById('selectr' + cid).style.display = 'none';\n        }\n    }\n\n    // SETTINGS\n    add_settings() {\n\n        // add the buttons\n        var set_b = this.tr_buttons.append('button')\n            .attr('data-bs-placement', 'bottom')\n            .attr('title', 'Viewer settings')\n\n        set_b.attr('class', ' square_button')\n        set_b.attr('id', 'button_settings' + this.container_object.uid)\n            .style('margin', '2px')\n            .on(\"click\", d => {\n                if (this.menu_settings.style('display') === 'none') { //make it as funtion\n                    this.menu_export.style(\"display\", 'none')\n                    set_b.style('background-color', '#CCC');\n                    document.getElementById(\"button_export\" + this.container_object.uid).style.backgroundColor = 'rgba(239, 239, 239, 0.95)';\n                    return this.menu_settings.style(\"display\", 'block')\n                }\n                set_b.style('background-color', 'rgba(239, 239, 239, 0.95)');\n                return this.menu_settings.style(\"display\", 'none')\n            })\n\n        set_b.append(\"div\")\n            .attr(\"class\",\"label\")\n            .append('i')\n            .style('color', '#888')\n            .attr('class', 'bi bi-sliders')\n\n        set_b.append('p')\n            .text('Settings')\n            .style('font-size', 'xx-small')\n\n\n\n        this.tooltip_settings = new bootstrap__WEBPACK_IMPORTED_MODULE_2__.Tooltip(document.getElementById('button_settings' + this.container_object.uid))\n\n\n        // add the menu\n        this.menu_settings = this.tr_menus.append('div')\n            .attr('class', 'menu_settings')\n\n\n        // ADD THE ACCORDION SYSTEM todo close other when open one\n\n        this.menu_general_b = this.menu_settings.append('button').attr('id', 'accordion_tree'+this.container_object.uid).attr('class', 'accordion').text(\"Tree\")\n        this.menu_general_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n        this.menu_tree_b = this.menu_settings.append('button').attr('id', 'accordion_branch'+this.container_object.uid).attr('class', 'accordion').text(\"Branches & Labels\")\n        this.menu_tree_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n\n        //this.menu_metadata_b = this.menu_settings.append('button').attr('id', 'accordion_color'+this.container_object.uid).attr('class', 'accordion').text(\"Additional Information\")\n        //this.menu_metadata_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        this.menu_coloring_b = this.menu_settings.append('button').attr('id', 'accordion_color'+this.container_object.uid).attr('class', 'accordion').text(\"Coloring\")\n        this.menu_coloring_panel =  this.menu_settings.append('div').attr('class', 'panel').attr('id', 'coloring_panel' + this.container_object.uid)\n        this.menu_coloring_p = this.menu_coloring_panel.append(\"div\").style(\"padding\", \"14px\").attr('id', 'coloring_p' + this.container_object.uid)\n\n        this.menu_search_b = this.menu_settings.append('button').attr('id', 'accordion_branch'+this.container_object.uid).attr('class', 'accordion').text(\"Search options\")\n        this.menu_search_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n        if (this.viewer.model.settings.has_histogram_data && this.viewer.model.settings.show_histogram ) {\n        this.menu_stack_b = this.menu_settings.append('button').attr('class', 'accordion').text(\"Bar Graph\")\n        this.menu_stack_p =  this.menu_settings.append('div').attr('class', 'panel').append(\"div\").style(\"padding\", \"14px\")\n\n\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Bar height\", 40, 300, this.viewer.model.settings.stack.stackHeight, 5, \"slider_stack_height_\",\n                (e ) =>{this.viewer.update_stack_height(e.target.value)})\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Bar width\", 10, 150, this.viewer.model.settings.stack.stackWidth, 5, \"slider_stack_width_\",\n                (e ) =>{this.viewer.update_stack_width(e.target.value)})\n\n            this.slider_sts = this.add_slider_UI(this.menu_stack_p, \"Label size\", 6, 40, this.viewer.model.settings.stack.legendTxtSize, 1, \"slider_stack_text_size_\",\n                (e ) =>{this.viewer.update_stack_font(e.target.value)})\n\n            this.menu_stack_p.append(\"p\").text('Labels').style('margin-bottom', \"0px\")\n\n\n            this.stack_type = this.menu_stack_p.append('div')\n                .style('display', 'flex')\n                .style('margin-bottom', \"14px\")\n\n\n\n            this.stack_type.append('button') // todo clean click\n                .attr('class', ' square_button')\n                .attr('id', 'stack_type_events')\n                .style('background-color', d => {return this.viewer.model.settings.stack.type === 'events' ? 'rgb(204, 204, 204)': null })\n                .on(\"click\", d => {\n                    this.viewer.update_stack_type('events')\n                    this.viewer. d3.select(\"#stack_type_events\").style('background-color','rgb(204, 204, 204)')\n                    this.viewer.d3.select(\"#stack_type_genes\").style('background-color', null)\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Events\")\n\n\n            this.stack_type.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'stack_type_genes')\n                .style('background-color', d => {return this.viewer.model.settings.stack.type === 'genes' ? 'rgb(204, 204, 204)': null })\n                .on(\"click\", d => {\n                    this.viewer.update_stack_type('genes')\n                    this.viewer.d3.select(\"#stack_type_genes\").style('background-color','rgb(204, 204, 204)')\n                    this.viewer.d3.select(\"#stack_type_events\").style('background-color', null)\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Genes\")\n\n            this.add_swicth_UI(this.menu_stack_p, (this.viewer.model.settings.stack.maxStackHeight === 'ratio'),\"Fix stack height\",   this.viewer.toggle_height_max_ratio.bind(this.viewer))\n\n            this.add_swicth_UI(this.menu_stack_p, this.viewer.model.settings.stack.showHistogramValues,\"Show numbers\",   this.viewer.toggle_show_stack_number.bind(this.viewer))\n\n            if (this.viewer.model.settings.stack.has_support){\n                this.add_swicth_UI(this.menu_stack_p, this.viewer.model.settings.stack.only_support,\"remove low coverage hogs\",   this.viewer.toggle_only_support.bind(this.viewer))\n\n            }\n\n\n\n\n        }\n\n        // ADD LOGIC TO ACCORDION todo add it general or to this div only\n        var acc = document.getElementById(this.container_object.div_id).getElementsByClassName(\"accordion\");\n        var that = this;\n        var i;\n\n        for (i = 0; i < acc.length; i++) {\n            acc[i].addEventListener(\"click\", function(e) {\n\n                this.classList.toggle(\"active\");\n\n                var panel = this.nextElementSibling;\n                if (panel.style.maxHeight) {\n                    panel.style.maxHeight = null;\n                } else {\n                    panel.style.maxHeight = panel.scrollHeight + \"px\";\n                }\n\n                //that.toggle_select_node_face(that.container_object.uid)\n\n                /*\n\n                var checkExist = setInterval(function() {\n\n                    var obs_h = panel.style.maxHeight ? panel.getBoundingClientRect().height : 0\n                    var exp_h = panel.style.maxHeight ? panel.scrollHeight : 0\n\n                    if (obs_h == exp_h ) {\n                        that.toggle_select_node_face(that.container_object.uid)\n                        clearInterval(checkExist);\n                    }\n\n                    else {\n                        console.log(obs_h, exp_h )\n                    }\n                }, 200);\n\n                 */\n\n            });\n\n\n        }\n\n        // ADD TOGGLE BRANCH LENGTH\n        if(this.viewer.model.settings.has_branch_lenght){\n            this.add_swicth_UI(this.menu_general_p, !this.viewer.model.settings.use_branch_lenght,\"Ignore branch length\",   this.viewer.toggle_use_length.bind(this.viewer))\n        }\n\n        this.add_swicth_UI(this.menu_general_p, this.viewer.model.settings.align_tip,\"Align leaves\",   this.viewer.toggle_align_tip.bind(this.viewer))\n\n        this.add_swicth_UI(this.menu_general_p, this.viewer.model.settings.mirror,\"Mirror tree\",   this.viewer.toggle_mirror.bind(this.viewer))\n\n        // ADD SLIDER RESIZE X/Y\n        /*\n        this.slider_v = this.add_slider_UI(this.menu_general_p, \"Tree height\", 2, 1000, this.viewer.model.settings.tree.node_vertical_size, 1, \"slider_node_vertical_size_\",\n            (e ) =>{this.viewer.modify_node_size('vertical', e.target.value - this.viewer.model.settings.tree.node_vertical_size)})\n\n        this.slider_h = this.add_slider_UI(this.menu_general_p, \"Tree width\", 2, 1000, this.viewer.model.settings.tree.node_horizontal_size, 1, \"slider_node_horyzontal_size_\",\n            (e ) =>{this.viewer.modify_node_size('horizontal', e.target.value - this.viewer.model.settings.tree.node_horizontal_size)})\n  */\n\n\n        //this.buttons_height = this.add_quartet_buttons(this.menu_general_p, \"Tree height\", \"buton_vertical_size_\", this.container_object.modify_node_size_percent, 'vertical')\n        //this.buttons_width = this.add_quartet_buttons(this.menu_general_p, \"Tree width\", \"buton_horyzontal_size_\", this.container_object.modify_node_size_percent, 'horizontal')\n\n        this.add_quartet_buttons_single_line(this.menu_general_p, \"Tree height\", \"buton_vertical_size_\", this.container_object.modify_node_size_percent, 'vertical')\n        this.add_quartet_buttons_single_line(this.menu_general_p, \"Tree width\", \"buton_horyzontal_size_\", this.container_object.modify_node_size_percent, 'horizontal')\n\n\n        // ADD SELECT LEFT NODE LABEL\n        this.add_node_face_UI(this.menu_tree_p, this.container_object.uid)\n\n        // ADD TOGGLE INTERNAL LABEL\n        //this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_internal_label,\"Show internal label\",   this.viewer.toggle_internal_label.bind(this.viewer))\n\n\n        // ADD TOGGLE show internal name for triangle\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.use_internal_node_name_for_triangles,\"Show collapsed subtrees name\",   this.viewer.toggle_triangle_name.bind(this.viewer))\n\n        // ADD TOGGLE tooltips\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.subsample_label,\"Subsample labels\",   this.viewer.toggle_subsample.bind(this.viewer))\n\n        // ADD TOGGLE LEAF LABEL\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_leaves,\"Show leaf labels\",   this.viewer.toggle_leaves.bind(this.viewer))\n\n        // ADD TOGGLE NODE LABEL\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_leaves,\"Show node labels\",   this.viewer.toggle_node_labels.bind(this.viewer))\n\n        // ADD TOGGLE tooltips\n        this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.show_tooltips,\"Show data tooltips\",   this.viewer.toggle_tooltips.bind(this.viewer))\n\n        if (this.viewer.model.settings.has_duplications){\n            // ADD TOGGLE DUPLICATION\n            this.add_swicth_UI(this.menu_tree_p, this.viewer.model.settings.display_duplication,\"Show duplications\",   this.viewer.toggle_duplication.bind(this.viewer))\n\n        }\n\n        //this.add_quartet_buttons(this.menu_tree_p, \"Node radius\", \"buton_node_radius_\", this.container_object.update_node_radius_percent )\n        this.add_quartet_buttons_single_line(this.menu_tree_p, \"Node radius\", \"buton_node_radius_\", this.container_object.update_node_radius_percent)\n\n\n        //this.add_quartet_buttons(this.menu_tree_p, \"Line width\", \"buton_line_width_\", this.container_object.update_line_width_percent)\n        this.add_quartet_buttons_single_line(this.menu_tree_p, \"Line width\", \"buton_line_width_\", this.container_object.update_line_width_percent)\n\n\n\n        // COLLAPSE\n        this.slider_c = this.add_slider_UI(this.menu_general_p,\n            this.viewer.model.settings.collapse_level == 0 ? \"Autocollapse: Off\" : \"Autocollapse: \" + this.viewer.model.settings.collapse_level,\n            0, this.viewer.model.settings.tree.max_depth , this.viewer.model.settings.collapse_level, 0,\"slider_collapse_level_\",)\n        document.getElementById(\"slider_collapse_level_\" + this.container_object.uid).onchange = (e) => {\n\n\n            this.viewer.update_collapse_level(e.target.value, false)\n            var lab = e.target.value == 0 ? \"Autocollapse: Off\" : \"Autocollapse: \" + this.viewer.model.settings.collapse_level;\n\n            document.getElementById(\"slider_collapse_level_\" + this.container_object.uid)\n                .parentElement.previousSibling.innerHTML = lab;\n\n            }\n\n\n        if (this.api.settings.compareMode) {\n            // equalize tree\n            this.menu_general_p.append(\"p\").text('Equalize trees')\n                .style('margin-bottom', '0px')\n\n\n            this.equalize_div = this.menu_general_p.append('div')\n                .style('display', 'flex')\n                .style('margin-top', '0px')\n\n\n            this.equalize_div.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'equ_reroot' + this.viewer.uid)\n                .on(\"click\", d => {\n                    this.container_object.reroot_to_compared_tree()\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Reroot\")\n\n\n            this.equalize_div.append('button')\n                .attr('class', ' square_button')\n                .attr('id', 'equ_reorder' + this.viewer.uid)\n                .on(\"click\", d => {\n                    this.container_object.reorder_to_compared_tree()\n                })\n                .style('margin', '2px')\n                .style('flex-grow', '1')\n                .append(\"text\")\n                .text(\"Reorder\")\n        }\n\n\n        // ADD TOGGLE MULTIPLE SEARCH\n        this.add_swicth_UI(this.menu_search_p, this.viewer.model.settings.multiple_search,\"Keep queries highlighted\",   this.viewer.toggle_multiple_search.bind(this.viewer))\n\n        // ADD reset search button\n\n        this.search_button_div = this.menu_search_p.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n\n\n        this.search_button_div.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'reset_search' + this.viewer.uid)\n            .on(\"click\", d => {\n                this.container_object.remove_highlight_node();\n                this.viewer.set_data(this.container_object.models[this.container_object.current_model])\n                this.viewer.render(this.viewer.hierarchy)\n            })\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"Reset search\")\n\n        /*\n        // ADDITIONAL DATA\n        var meta_div = this.menu_metadata_p.append('div')\n            .style('display','block')\n            //.style('margin','8px')\n\n\n        meta_div.append('p').text(\"Mapping file\").style('font-weight','bold')\n\n\n        meta_div.append('input')\n            .attr('id','filemeta' + this.container_object.uid )\n            .attr('type','file')\n            .style('margin-bottom','16px')\n\n\n        this.add_swicth_UI(this.menu_metadata_p, this.viewer.model.settings.use_meta_for_leaf,\"Apply to leaves\",   this.viewer.toggle_use_meta_for_leaf.bind(this.viewer) )\n        this.add_swicth_UI(this.menu_metadata_p, this.viewer.model.settings.use_meta_for_node,\"Apply to nodes\",   this.viewer.toggle_use_meta_for_node.bind(this.viewer))\n\n\n        this.meta_div = this.menu_metadata_p.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n\n\n        this.button_meta = this.meta_div.append('button')\n            .attr('id','button_add_meta' + this.container_object.uid )\n            .on(\"click\", (e) => {\n\n                var file = document.getElementById('filemeta' + this.container_object.uid).files[0];\n\n                if (file) {\n                    const reader = new FileReader();\n                    reader.addEventListener('load', (event) => {\n\n                        var meta = []\n\n                        d3.csvParse(event.target.result, (d) => {meta[d.id] = d});\n\n                        if (this.viewer.model.settings.use_meta_for_leaf){\n                            this.viewer.model.add_meta_leaves(meta)\n                        }\n\n                        if (this.viewer.model.settings.use_meta_for_node){\n                            this.viewer.model.add_meta_nodes(meta)\n                        }\n\n                        this.viewer.interface = new Interface(this.viewer, this.viewer.container_object)\n\n                    });\n                    reader.readAsText(file);\n\n                }\n\n\n\n            })\n            .attr('class', ' square_button')\n            .style('border-radius', '2px')\n            .style('flex-grow', '1')\n            .style('background-color', '#CCC')\n            .text('Use this file')\n\n\n         */\n\n\n        // COLORING\n\n        this.add_settings_coloring()\n\n        }\n\n\n    add_node_coloring_UI(container_div){\n\n        var that = this;\n\n        container_div.append('p').text(\"Nodes\").style('font-weight','bold').style('margin-top','8px')\n\n        var drop = container_div.append('div')\n            .style('display','block')\n            .style('margin-left','8px')\n\n\n        var options = Array.from(this.viewer.model.settings.colorlabels['node'])\n        options.push(\"None\")\n\n        if (options.length > 0){\n\n            // SELECT DATA\n\n            options.unshift('None')\n\n            drop.append('label').text(\"Data\");\n\n            var selectcoloring = drop.append('select')\n                .attr('id','selectcoloringcircle' + this.container_object.uid )\n                .attr('class','select')\n                .style('float','right')\n                .on('change', function(){\n\n                    that.on_change_coloring_scheme('circle', this.value)\n                })\n\n            selectcoloring.selectAll('option').data(options).enter()\n                .append('option')\n                .attr('value', function (d) {\n                    return d; })\n                .property(\"selected\", (d) => { return d == this.viewer.model.settings.style.color_accessor['circle'] })\n                .text(function (d) { return d; });\n\n\n            this.color_circle_div = container_div.append('div')\n\n            this.minmax_circle_div = container_div.append('div')\n\n\n            if (this.viewer.model.settings.style.color_accessor['circle'] !== null) {\n\n                this.create_color_scheme_picker('circle')\n\n                this.create_min_max_picker('circle')\n            }\n\n\n\n        }\n        else {\n            drop.style('float','right').append('label').text(\"No Data available\");\n            container_div.append('br')\n\n        }\n\n    }\n\n    add_color_collapsing(container_div) {\n\n        var that = this;\n\n        // Add button for collapse uncolored taxon\n        this.collapse_color_button_div = container_div.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n\n\n        this.collapse_color_button_div.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'collapse_color_search' + this.viewer.uid)\n            .on(\"click\", d => {\n                this.container_object.collapse_node_not_colored()\n                this.viewer.build_d3_cluster()\n                this.viewer.render(this.viewer.hierarchy)\n                this.viewer.maximise_zoom()\n            })\n            .style('margin', '12px 0px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"Collapse uncolored subtrees \")\n\n        // Add select for select uncolored\n\n        var color_triangle_div = container_div.append('div')\n            .style('display','flex')\n            .style('float', 'right')\n\n\n        var options_triangle = ['Leaves', 'Nodes', 'Both'];\n\n        color_triangle_div.append('label')\n            .text(\"Using\")\n            .style('margin-right', '8px')\n\n        var selectcoloring_triangle = color_triangle_div.append('select')\n            .attr('id','selectcol_uncol' + this.container_object.uid )\n            .attr('class','select')\n            .style('float','right')\n            .on('change', function(){\n                that.viewer.model.settings.selected_collapse_uncolored = this.value;\n\n                /*\n                that.container_object.collapse_node_not_colored()\n                that.viewer.build_d3_cluster()\n                that.viewer.render(that.viewer.hierarchy)\n                that.viewer.maximise_zoom()\n\n                 */\n\n            })\n\n\n        selectcoloring_triangle.selectAll('option').data(options_triangle).enter()\n            .append('option')\n            .attr('value', function (d) {\n                return d; })\n            .property(\"selected\", (d) => { return d == this.viewer.model.settings.selected_collapse_uncolored })\n            .text(function (d) { return d; });\n\n        container_div.append('br')\n\n\n        // Add button for collapse unicolored taxon\n        this.collapse_unicolor_button_div = container_div.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n\n        this.collapse_unicolor_button_div.append('button')\n            .attr('class', ' square_button')\n            .attr('id', 'collapse_unicolor_search' + this.viewer.uid)\n            .on(\"click\", d => {\n                this.container_object.collapse_node_same_color()\n                this.viewer.build_d3_cluster()\n                this.viewer.render(this.viewer.hierarchy)\n                this.viewer.maximise_zoom()\n            })\n            .style('margin', '12px 0px')\n            .style('flex-grow', '1')\n            .append(\"text\")\n            .text(\"Collapse monocolored subtrees \")\n\n        // Add select for select unicolored\n\n        var color_unicolor_div = container_div.append('div')\n            .style('display','flex')\n            .style('float', 'right')\n\n        var _options_triangle = ['Leaves', 'Nodes', 'Both'];\n\n        color_unicolor_div.append('label')\n            .text(\"Using\")\n            .style('margin-right', '8px')\n\n        var selectcoloring_mono = color_unicolor_div.append('select')\n            .attr('id','selectcol_uncol' + this.container_object.uid )\n            .attr('class','select')\n            .style('float','right')\n\n            .on('change', function(){\n                that.viewer.model.settings.selected_collapse_monocolored = this.value;\n                /*\n                that.container_object.collapse_node_same_color()\n                that.viewer.build_d3_cluster()\n                that.viewer.render(that.viewer.hierarchy)\n                that.viewer.maximise_zoom()\n\n                 */\n               })\n\n\n\n\n        selectcoloring_mono.selectAll('option').data(_options_triangle).enter()\n            .append('option')\n            .attr('value', function (d) {\n                return d; })\n            .property(\"selected\", (d) => { return d == this.viewer.model.settings.selected_collapse_monocolored })\n            .text(function (d) { return d; });\n\n        container_div.append('br')\n    }\n\n    add_settings_coloring(){\n\n        var that = this;\n\n\n        if (this.viewer.model.settings.sync_coloring){\n\n            this.menu_coloring_p.append('p').text(\"Branches & Leaves\").style('font-weight','bold')\n\n            var color_both_div = this.menu_coloring_p.append('div')\n                .style('display','block')\n                .style('margin-left','8px')\n\n            var options_leaf = Array.from(this.viewer.model.settings.colorlabels['leaf'])\n            var options_node = Array.from(this.viewer.model.settings.colorlabels['node'])\n\n            var options = [...new Set( options_leaf.concat(options_node))]\n\n            if (options.length > 0){\n\n                // SELECT DATA\n                options.unshift('None')\n                color_both_div.append('label').text(\"Data\")\n\n                var selectcoloring_both = color_both_div.append('select')\n                    .attr('id','selectcoloring_both' + this.container_object.uid )\n                    .attr('class','select')\n                    .style('float','right')\n                    .on('change', function(){\n                        that.on_change_coloring_scheme('both', this.value)\n                    })\n\n                selectcoloring_both.selectAll('option').data(options).enter()\n                    .append('option')\n                    .attr('value', function (d) {\n                        return d; })\n                    .property(\"selected\", (d) => { return d == this.viewer.model.settings.style.color_accessor['node'] })\n                    .text(function (d) { return d; });\n\n\n                this.color_leaf_both = this.menu_coloring_p.append('div')\n\n                this.minmax_leaf_both = this.menu_coloring_p.append('div')\n\n                this.create_color_scheme_picker('both')\n\n                this.create_min_max_picker('both')\n\n            }\n            else {\n                color_both_div.style('float','right').append('label').text(\"No Data available\");\n                this.menu_coloring_p.append('br')\n\n            }\n\n        }\n\n        else {\n            this.menu_coloring_p.append('p').text(\"Leaf Labels\").style('font-weight','bold')\n\n            var color_leaves_div = this.menu_coloring_p.append('div')\n                .style('display','block')\n                .style('margin-left','8px')\n\n            var options = Array.from(this.viewer.model.settings.colorlabels['leaf'])\n\n\n            if (options.length > 0){\n\n                // SELECT DATA\n\n                options.unshift('None')\n\n                color_leaves_div.append('label').text(\"Data\")\n\n                var selectcoloring_leaf = color_leaves_div.append('select')\n                    .attr('id','selectcoloring_leaf' + this.container_object.uid )\n                    .attr('class','select')\n                    .style('float','right')\n                    .on('change', function(){\n\n                        that.on_change_coloring_scheme('leaf', this.value)\n\n                    })\n\n                selectcoloring_leaf.selectAll('option').data(options).enter()\n                    .append('option')\n                    .attr('value', function (d) {\n                        return d; })\n                    .property(\"selected\", (d) => { return d == this.viewer.model.settings.style.color_accessor['leaf'] })\n                    .text(function (d) { return d; });\n\n\n                this.color_leaf_div = this.menu_coloring_p.append('div')\n\n                this.minmax_leaf_div = this.menu_coloring_p.append('div')\n\n            }\n            else {\n                color_leaves_div.style('float','right').append('label').text(\"No Data available\");\n                this.menu_coloring_p.append('br')\n\n            }\n\n            if (this.viewer.model.settings.style.color_accessor['leaf'] !== null) {\n\n                this.color_leaf_div = this.menu_coloring_p.append('div')\n\n                this.minmax_leaf_div = this.menu_coloring_p.append('div')\n\n                this.create_color_scheme_picker('leaf')\n\n                this.create_min_max_picker('leaf')\n            }\n\n\n            this.menu_coloring_p.append('p').text(\"Branches\").style('font-weight','bold').style('margin-top','8px')\n\n            var drop = this.menu_coloring_p.append('div')\n                .style('display','block')\n                .style('margin-left','8px')\n\n\n            drop.append('label').text(\"Data\");\n\n            var selectcoloring = drop.append('select')\n                .attr('id','selectcoloring' + this.container_object.uid )\n                .attr('class','select')\n                .style('float','right')\n                .on('change', function(){\n\n                    that.on_change_coloring_scheme('node', this.value)\n\n                })\n\n            var options = Array.from(this.viewer.model.settings.colorlabels['node'])\n            options.push(\"None\")\n\n            if (this.viewer.model.settings.style.color_accessor['node'] !== null) {\n\n                selectcoloring.selectAll('option').data(options).enter().append('option').attr('value', function (d) {\n                    return d;\n                })\n                    .property(\"selected\", (d) => {\n                        return d == this.viewer.model.settings.style.color_accessor['node']\n                    })\n                    .text(function (d) {\n                        return d;\n                    });\n\n\n                this.color_node_div = this.menu_coloring_p.append('div')\n\n                this.minmax_node_div = this.menu_coloring_p.append('div')\n\n                this.create_color_scheme_picker('node')\n\n                this.create_min_max_picker('node')\n            }\n        }\n\n        this.add_node_coloring_UI(this.menu_coloring_p)\n\n        this.menu_coloring_p.append('hr').style('margin', '20px 0px 4px 0px')\n\n        this.add_color_collapsing(this.menu_coloring_p)\n\n        this.menu_coloring_p.append('hr').style('margin', '20px 0px 4px 0px')\n\n\n        // add sync coloring\n        this.add_swicth_UI(this.menu_coloring_p, this.viewer.model.settings.sync_coloring,\"Link branch & leaf coloring\",   this.viewer.toggle_sync_coloring.bind(this.viewer))\n\n        var color_triangle_div = this.menu_coloring_p.append('div')\n            .style('display','block')\n            //.style('margin-left','8px')\n\n        var options_triangle = ['None', 'Leaves', 'Branches'];\n\n        color_triangle_div.append('label').text(\"Color collapsed subtrees by\")\n\n            var selectcoloring_triangle = color_triangle_div.append('select')\n                .attr('id','selectcoloring_triangle' + this.container_object.uid )\n                .attr('class','select')\n                .style('float','right')\n                .on('change', function(){\n                    that.viewer.model.settings.selected_triangle_coloring = this.value;\n                    that.viewer.render(that.viewer.hierarchy)\n\n                })\n\n        selectcoloring_triangle.selectAll('option').data(options_triangle).enter()\n                .append('option')\n                .attr('value', function (d) {\n                    return d; })\n                .property(\"selected\", (d) => { return d == this.viewer.model.settings.selected_triangle_coloring })\n                .text(function (d) { return d; });\n    }\n\n    on_change_coloring_scheme(type, val){\n\n        if (type == 'both'){\n            this.viewer.model.settings.style.color_accessor['node'] =  val === 'None' ? null : val;\n            this.viewer.model.settings.style.color_accessor['leaf'] =  val === 'None' ? null : val;\n            var acc = this.viewer.model.settings.style.color_accessor['node']\n        }\n        else {\n            this.viewer.model.settings.style.color_accessor[type] =  val === 'None' ? null : val;\n\n            var acc = this.viewer.model.settings.style.color_accessor[type]\n        }\n\n\n\n        if (!(acc in this.viewer.model.settings.style.number_domain)) {\n            this.viewer.model.settings.style.number_domain[acc] = 3\n        }\n\n        this.create_color_scheme_picker(type)\n\n        this.create_min_max_picker(type)\n\n        if (type == 'both') {\n            this.viewer.model.set_color_scale('node', this.api);\n            this.viewer.model.set_color_scale('leaf', this.api);\n        }\n        else{\n            this.viewer.model.set_color_scale(type, this.api);\n        }\n        this.viewer.render(this.viewer.hierarchy)\n\n\n        if (type == 'both') {\n            this.remove_color_legend('node');\n            this.remove_color_legend('leaf');\n        }\n        else{\n            this.remove_color_legend(type);\n        }\n\n\n\n        if (type == 'both' && this.viewer.model.settings.style.color_accessor['node']) {\n            this.add_color_legend('node')\n        }\n        else if (this.viewer.model.settings.style.color_accessor[type]){\n            this.add_color_legend(type);\n        }\n\n        this.menu_coloring_panel.style(\"max-height\", this.menu_coloring_p.style(\"height\"))\n\n\n    }\n\n    create_color_scheme_picker(type){\n\n        var that = this;\n\n        var acc = type == 'both' ?  this.viewer.model.settings.style.color_accessor['node'] : this.viewer.model.settings.style.color_accessor[type]\n\n        var type_acc = this.viewer.model.settings.extended_data_type[acc]\n\n        if (type == 'leaf'){\n            var container_ = this.color_leaf_div\n            container_.html('')\n        }\n\n        else if (type == 'node'){\n            var container_ = this.color_node_div\n            container_.html('')\n\n\n        }\n\n        else if (type == 'both'){\n            var container_ = this.color_leaf_both\n            container_.html('')\n\n        }\n        else if (type == 'circle'){\n            var container_ = this.color_circle_div\n            container_.html('')\n        }\n\n        if (!acc){return}\n\n        if (type_acc == 'num'){\n\n            var domain_leaf = container_.append('div')\n                .style('display','block')\n                .style('margin','8px')\n                .style('margin-bottom','12px')\n\n            domain_leaf.append('label').text(\"Nb. of colors\");\n\n            domain_leaf.append('input')\n                .attr('id','inputcoloring_' + type + this.container_object.uid )\n                .attr('type','number')\n                .attr('name','quantity')\n                .attr('min','2')\n                .attr('value', this.viewer.model.settings.style.number_domain[acc])\n                .attr('max','5')\n                .style('float','right')\n                .on('change', (d) => {\n\n                    delete this.viewer.model.settings.style.color_domain[acc]\n\n                    this.viewer.model.settings.style.number_domain[acc] =  parseInt(document.getElementById('inputcoloring_' + type + this.container_object.uid ).value);\n                    this.create_color_picker(type)\n                    if (type == 'both') {\n                        this.viewer.model.set_color_scale('node', this.api);\n                        this.viewer.model.set_color_scale('leaf', this.api);\n                    }\n                    else{\n                        this.viewer.model.set_color_scale(type, this.api);\n                    }\n                    this.viewer.render(this.viewer.hierarchy)\n\n                })\n\n\n            var colcol = container_.append('div')\n                .style('display','block')\n                .style('margin','8px')\n\n            colcol.append('label').text(\"Color\");\n\n            colcol.append(\"span\").attr('id',type + '_colorspan_' + this.container_object.uid );\n\n            this.create_color_picker(type)\n\n        }\n\n        else if (type_acc == 'color' ){\n            container_.append('label').text(\"Use color loaded\").style('float', 'right');\n            container_.append('br')\n            if (type == 'both') {\n                this.viewer.model.set_color_scale('node', this.api);\n                this.viewer.model.set_color_scale('leaf', this.api);\n            }\n            else{\n                this.viewer.model.set_color_scale(type, this.api);\n            }\n            this.viewer.render(this.viewer.hierarchy)\n        }\n\n        else if (type_acc == 'cat' || typeof type_acc == 'undefined'){\n\n            var color_scheme_div = container_.append('div')\n                .style('display','block')\n                .style('margin-left','8px')\n\n            var options = Object.keys(d3_scale_chromatic__WEBPACK_IMPORTED_MODULE_4__)\n                    .filter(key => key.startsWith('interpolate'))\n                    .reduce((acc, key) => { acc[key.replace('interpolate', '')] = d3__WEBPACK_IMPORTED_MODULE_1__[key]; return acc; }, {})\n\n            var options_name = Object.keys(options)\n\n\n            // SELECT DATA\n            color_scheme_div.append('label').text(\"Color scheme\")\n\n            var selectcoloring_both = color_scheme_div.append('select')\n                .attr('id','selectcoloring_scheme' + this.container_object.uid )\n                .attr('class','select')\n                .style('float','right')\n                .on('change', function(){\n\n                    if (type == 'both') {\n                        var cs = that.api.get_color_scale(that.viewer.model.settings.style.color_accessor['node']);\n                        cs.update_scheme(options[this.value], this.value );\n                        cs.update();\n                        that.viewer.model.set_color_scale('node', that.api);\n\n                        var cs = that.api.get_color_scale(that.viewer.model.settings.style.color_accessor['leaf']);\n                        cs.update_scheme(options[this.value], this.value );\n                        cs.update();\n                        that.viewer.model.set_color_scale('leaf', that.api);\n\n                    }\n                    else{\n                        var cs = that.api.get_color_scale(that.viewer.model.settings.style.color_accessor[type]);\n                        cs.update_scheme(options[this.value], this.value );\n                        cs.update();\n                        that.viewer.model.set_color_scale(type, that.api);\n\n                    }\n                    that.viewer.render(that.viewer.hierarchy)\n\n                })\n\n            var type_scheme = type == 'both' ? 'node' : type\n\n            selectcoloring_both.selectAll('option').data(options_name).enter()\n                .append('option')\n                .attr('value', function (d) { return d  })\n                .property(\"selected\", (d) => {  return d == this.api.get_color_scale(this.viewer.model.settings.style.color_accessor[type_scheme]).scheme_name })\n                .text(function (d) { return d; });\n\n\n        }\n\n        else{\n            container_.append('label').text(\"\");\n        }\n\n\n\n\n}\n\n    create_min_max_picker(type){\n\n        var acc = type == 'both' ?  this.viewer.model.settings.style.color_accessor['node'] : this.viewer.model.settings.style.color_accessor[type]\n        var type_acc = this.viewer.model.settings.extended_data_type[acc]\n\n\n        if (type == 'leaf'){\n            var container_ = this.minmax_leaf_div\n            container_.html('')\n\n            var val_min = this.viewer.model.settings.style.color_extent_min[type][acc]\n            var val_max = this.viewer.model.settings.style.color_extent_max[type][acc]\n        }\n\n        else if (type == 'node'){\n            var container_ = this.minmax_node_div\n            container_.html('')\n\n            var val_min = this.viewer.model.settings.style.color_extent_min[type][acc]\n            var val_max = this.viewer.model.settings.style.color_extent_max[type][acc]\n        }\n\n        else if (type == 'circle'){\n            var container_ = this.minmax_circle_div\n            container_.html('')\n\n            var max_ = this.viewer.model.settings.style.color_extent_max\n            var min_ = this.viewer.model.settings.style.color_extent_min\n\n            if (max_['circle'][acc] === undefined){\n                max_['circle'][acc] = max_['node'][acc];\n            }\n            if (min_['circle'][acc] === undefined){\n                min_['circle'][acc] = min_['node'][acc];\n            }\n\n\n            var val_min = this.viewer.model.settings.style.color_extent_min['circle'][acc]\n            var val_max = this.viewer.model.settings.style.color_extent_max['circle'][acc]\n\n        }\n\n        else if (type == 'both'){\n            var container_ = this.minmax_leaf_both\n            container_.html('')\n\n            if (this.viewer.model.settings.style.color_extent_min['node'][acc] !=100000){\n                var val_min = this.viewer.model.settings.style.color_extent_min['node'][acc]\n                var val_max = this.viewer.model.settings.style.color_extent_max['node'][acc]\n            }\n            else{\n                var val_min = this.viewer.model.settings.style.color_extent_min['leaf'][acc]\n                var val_max = this.viewer.model.settings.style.color_extent_max['leaf'][acc]\n            }\n\n\n        }\n\n        if (type_acc == 'num'){\n\n            var min_ = container_.append('div')\n                .style('display','block')\n                .style('margin','8px')\n                .style('margin-bottom','12px')\n\n            min_.append('label').text(\"Min scale value\");\n\n            min_.append('input')\n                .attr('type','number')\n                .attr('name','quantity')\n                .attr('min','-9999999999')\n                .attr('value', val_min)\n                .attr('max','9999999999')\n                .style('float','right')\n                .on('change', (d) => {\n\n                    if (type == 'both'){\n                        this.viewer.model.settings.style.color_extent_min['leaf'][acc] = parseFloat(d.target.value)\n                        this.viewer.model.settings.style.color_extent_min['node'][acc] = parseFloat(d.target.value)\n\n                        this.viewer.model.set_color_scale('node', this.api);\n                        this.viewer.model.set_color_scale('leaf', this.api);\n                        this.viewer.render(this.viewer.hierarchy)\n                        this.remove_color_legend('node')\n                        this.remove_color_legend('leaf')\n                        this.add_color_legend('node')\n                    }\n\n                    else {\n                        this.viewer.model.settings.style.color_extent_min[type][acc] = parseFloat(d.target.value)\n\n                        this.viewer.model.set_color_scale(type, this.api);\n                        this.viewer.render(this.viewer.hierarchy)\n                        this.remove_color_legend(type)\n                        this.add_color_legend(type)\n                    }\n\n\n                })\n\n            var max_ = container_.append('div')\n                .style('display','block')\n                .style('margin','8px')\n                .style('margin-bottom','12px')\n\n            max_.append('label').text(\"Max scale value\");\n\n            max_.append('input')\n                .attr('type','number')\n                .attr('name','quantity')\n                .attr('min','-9999999999')\n                .attr('value', val_max)\n                .attr('max','9999999999')\n                .style('float','right')\n                .on('change', (d) => {\n                    if (type == 'both'){\n                        this.viewer.model.settings.style.color_extent_max['node'][acc] = parseFloat(d.target.value)\n                        this.viewer.model.settings.style.color_extent_max['leaf'][acc] = parseFloat(d.target.value)\n\n                        this.viewer.model.set_color_scale('node', this.api);\n                        this.viewer.model.set_color_scale('leaf', this.api);\n                        this.viewer.render(this.viewer.hierarchy)\n                        this.remove_color_legend('node')\n                        this.remove_color_legend('leaf')\n                        this.add_color_legend('node')\n                    }\n                    else {\n                        this.viewer.model.settings.style.color_extent_max[type][acc] = parseFloat(d.target.value)\n\n                        this.viewer.model.set_color_scale(type, this.api);\n                        this.viewer.render(this.viewer.hierarchy)\n                        this.remove_color_legend(type)\n                        this.add_color_legend(type)\n                    }\n\n                })\n\n            // add button to auto setup min and max from other viewer. It need to accound for compare mode and for other contrainer\n\n            if (this.api.settings.compareMode){\n\n                var button_ = container_.append('div')\n                    .style('display','flex')\n                    .style('margin','8px')\n                    .style('margin-bottom','12px')\n\n                button_.append('button')\n                    .attr('class', ' square_button')\n                    .attr('id', 'auto_minmax_' + type + this.container_object.uid)\n                    .on(\"click\", d => {\n\n                        // get the other compared container using bound_container and .viewer to select wich is the one bind to current interface and not\n                        // the one that is compared\n\n                        var con1 = this.api.bound_container[0]\n                        var con2 =  this.api.bound_container[1]\n                        var other_viewer = con1.viewer == this.viewer ? con2.viewer.model.settings.style : con1.viewer.model.settings.style\n\n\n                        if (type == 'both'){\n\n\n                            this.viewer.model.settings.style.color_extent_max['node'][acc] = other_viewer.color_extent_max['node'][acc]\n                            this.viewer.model.settings.style.color_extent_max['leaf'][acc] = other_viewer.color_extent_max['leaf'][acc]\n\n                            this.viewer.model.settings.style.color_extent_min['node'][acc] = other_viewer.color_extent_min['node'][acc]\n                            this.viewer.model.settings.style.color_extent_min['leaf'][acc] = other_viewer.color_extent_min['leaf'][acc]\n\n                            this.viewer.model.set_color_scale('node', this.api);\n                            this.viewer.model.set_color_scale('leaf', this.api);\n                            this.viewer.render(this.viewer.hierarchy)\n                            this.remove_color_legend('node')\n                            this.remove_color_legend('leaf')\n                            this.add_color_legend('node')\n\n                            min_.select('input').property('value', this.viewer.model.settings.style.color_extent_min['leaf'][acc])\n                            max_.select('input').property('value', this.viewer.model.settings.style.color_extent_max['leaf'][acc])\n\n                        }\n                        else {\n                            this.viewer.model.settings.style.color_extent_max[type][acc] = other_viewer.color_extent_max[type][acc]\n                            this.viewer.model.settings.style.color_extent_min[type][acc] = other_viewer.color_extent_min[type][acc]\n\n                            this.viewer.model.set_color_scale(type, this.api);\n                            this.viewer.render(this.viewer.hierarchy)\n                            this.remove_color_legend(type)\n                            this.add_color_legend(type)\n\n                            min_.select('input').property('value', this.viewer.model.settings.style.color_extent_min[type][acc])\n                            max_.select('input').property('value', this.viewer.model.settings.style.color_extent_max[type][acc])\n                        }\n\n\n\n                    })\n                    .style('margin', '2px')\n                    .style('flex-grow', '1')\n                    .append(\"text\")\n                    .text(\"Auto min/max\")\n\n            }\n\n        }\n\n\n}\n\n    create_color_picker(type){\n\n        var colspan = d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + type + '_colorspan_' + this.container_object.uid)\n\n        colspan.html(\"\")\n\n        var acc = type == 'both' ?  this.viewer.model.settings.style.color_accessor['node'] : this.viewer.model.settings.style.color_accessor[type]\n        var number = this.viewer.model.settings.style.number_domain[acc];\n\n        if (!(acc in this.viewer.model.settings.style.color_domain)) {\n            this.viewer.model.settings.style.color_domain[acc] = this.viewer.model.settings.style.color_domain_default\n\n            var default_color = this.viewer.model.settings.style.color_domain_default\n\n            var w = Math.round(135/number);\n            var color = []\n\n            switch (number) {\n                case 2:\n                    color = [default_color[0], default_color[4]]\n                    break;\n                case 3:\n                    color = [default_color[0],default_color[2], default_color[4]]\n                    break;\n                case 4:\n                    color = [default_color[0],default_color[1],default_color[2], default_color[4]]\n                    break;\n                case 5:\n                    color = default_color\n\n            }\n\n            this.viewer.model.settings.style.color_domain[acc] = color\n        }\n        else {\n            var color = this.viewer.model.settings.style.color_domain[acc]\n        }\n\n\n\n         for (let i = 0; i < number; i++) {\n             var idd = type + '_color_picker_' + this.viewer.container_object.uid + '_' + i;\n             colspan.append(\"span\").style('display',' inline-block').style('float','right')\n                 .html(\"<input class='colpicker_\" + type + \"' type=\\\"color\\\"  id=\\\"\"+idd+\"\\\"  style='width:\" + w +\"px;'name=\\\"favcolor\\\" value=\\\"\" + color[i] + \"\\\">\")\n\n             d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + idd).on('change', () => {\n\n\n                 this.update_color_pickers(type)\n\n                 if (type == 'both'){\n                     this.viewer.model.set_color_scale('node', this.api);\n                     this.viewer.model.set_color_scale('leaf', this.api);\n                 }\n                 else {\n                     this.viewer.model.set_color_scale(type, this.api);\n                 }\n\n                 this.viewer.model.set_color_scale('node', this.api);\n                 this.viewer.model.set_color_scale('leaf', this.api);\n                 this.viewer.render(this.viewer.hierarchy)\n                 this.remove_color_legend(type)\n                 this.add_color_legend(type)\n\n\n             })\n\n         }\n\n    }\n\n    update_color_pickers(type){\n\n        var colspan = d3__WEBPACK_IMPORTED_MODULE_1__.select(\"#\" + type + '_colorspan_' + this.container_object.uid)\n\n\n        var new_col = []\n        colspan.selectAll(\".colpicker_\" + type).each(function(d){\n            new_col.push(this.value)\n        })\n\n        var acc = type == 'both' ? this.viewer.model.settings.style.color_accessor['node'] :this.viewer.model.settings.style.color_accessor[type]\n\n        this.viewer.model.settings.style.color_domain[acc] = new_col\n\n\n    }\n\n    add_swicth_UI(parent, checked, label, f){\n\n        var lab = parent.append('label').style(\"display\", 'inline-block')\n            .attr(\"class\",\"switch\")\n\n        lab.append('input').attr('type', 'checkbox' ).property('checked', checked);\n        lab.append('span').attr(\"class\",\"slider_t round\")\n            .on('click', (d) => { f()} )\n\n        parent.append('p').text(label).style(\"display\", 'inline-block').style(\"margin-left\", '12px')\n        parent.append('br')\n\n    }\n\n    add_node_face_UI(parent,container_id){\n\n        var w = 220;\n        var h = 160;\n        var gutter = 20\n\n        var color_line = 'gray';\n\n        var s = parent.append(\"svg\")\n            .attr('display', 'block')\n            .attr(\"width\", w )\n            .attr(\"height\", h+ gutter)\n\n        // vertical\n        s.append('line')\n            .attr(\"x1\", w/3)\n            .attr(\"y1\", gutter)\n            .attr(\"x2\", w/3)\n            .attr(\"y2\", h-gutter)\n            .attr(\"stroke\", color_line)\n\n        // middle line\n        s.append('line')\n            .attr(\"x1\", gutter/2)\n            .attr(\"y1\", h/2)\n            .attr(\"x2\", w/3)\n            .attr(\"y2\", h/2)\n            .attr(\"stroke\", color_line)\n\n        s.append('circle')\n            .attr('cx', w/3)\n            .attr('cy', h/2)\n            .attr('r', 5)\n            .attr('stroke', 'black')\n            .attr('fill', '#69a3b2');\n\n        s.append(\"text\")\n            .attr(\"x\", w/3 - gutter)\n            .attr(\"y\", h/2 - gutter)\n            .attr(\"dy\", \".35em\")\n            .text('A');\n\n        s.append(\"text\")\n            .attr(\"x\", w/3 + gutter)\n            .attr(\"y\", h/2 )\n            .attr(\"dy\", \".35em\")\n            .text('B');\n\n        s.append(\"text\")\n            .attr(\"x\", w/3 - gutter)\n            .attr(\"y\", h/2 + gutter)\n            .attr(\"dy\", \".35em\")\n            .text('C');\n\n\n\n        // top horizontal\n        s.append('line')\n            .attr(\"stroke\", color_line)\n            .attr(\"x1\", w/3)\n            .attr(\"y1\", gutter)\n            .attr(\"x2\", w-3*gutter)\n            .attr(\"y2\", gutter);\n\n        s.append(\"text\")\n            .attr(\"x\", w-2.5*gutter)\n            .attr(\"y\", gutter - 4)\n            .attr(\"dy\", \".35em\")\n            .text('...');\n\n        // bottom horizontal\n        s.append('line')\n            .attr(\"stroke\", color_line)\n            .attr(\"x1\", w/3)\n            .attr(\"y1\", h-gutter)\n            .attr(\"x2\", w-3*gutter)\n            .attr(\"y2\", h-gutter);\n\n\n        s.append('circle')\n            .attr('cx', w-3*gutter)\n            .attr('cy', h-gutter)\n            .attr('r', 2)\n            .attr('fill', 'black');\n\n        s.append(\"text\")\n            .attr(\"x\", w-2*gutter)\n            .attr(\"y\", h-gutter)\n            .attr(\"dy\", \".35em\")\n            .text('E');\n\n        s.append(\"text\")\n            .attr(\"x\", w-4*gutter)\n            .attr(\"y\", h-2*gutter)\n            .attr(\"dy\", \".35em\")\n            .text('D');\n\n        s.append(\"text\")\n            .attr(\"x\", w-4*gutter)\n            .attr(\"y\", h)\n            .attr(\"dy\", \".35em\")\n            .text('F');\n\n\n\n\n        // NODE DATUM\n\n        parent.append(\"p\").text('Node labels')\n            .style('margin-bottom','0px')\n            .style('font-weight','bold')\n\n\n        var l = Array.from(this.viewer.model.settings.labels['node'])\n\n        var options = [\"None\", 'Topology']\n        options = options.concat(l)\n\n        var that = this\n\n        parent.append('text').style('display','inline').text('A').style('margin-right','4px').style('margin-left','12px')\n        var selectlt = parent.append('select').attr('id','selectlt' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label_left_top = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n        parent.append('br')\n\n        parent.append('text').style('display','inline').text('B').style('margin-right','4px').style('margin-left','12px')\n        var selectr = parent.append('select').attr('id','selectr' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n        parent.append('br')\n\n        parent.append('text').style('display','inline').text('C').style('margin-right','4px').style('margin-left','12px')\n        var selectlb = parent.append('select').attr('id','selectlb' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_internal_label_left_bottom = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n        parent.append('br')\n\n        selectlt.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectlb.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectr.selectAll('option').data(options).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n\n        this.add_quartet_buttons_single_line(this.menu_tree_p, \"Font size\", \"buton_node_label_\", this.container_object.update_font_size_node_percent)\n\n\n        parent.append('br')\n\n        // LEAF DATUM\n\n        parent.append(\"p\").text('Leaf labels')\n            .style('margin-bottom','0px')\n            .style('font-weight','bold')\n\n\n        var l2 = Array.from(this.viewer.model.settings.labels['leaf'])\n\n        var options2 = [\"None\"]\n        options2 = options2.concat(l2)\n\n        var options2_name = [\"Default\"]\n        options2_name = options2_name.concat(l2)\n\n        var that = this\n\n        parent.append('text').style('display','inline').text('D').style('margin-right','4px').style('margin-left','12px')\n        var selectltl = parent.append('select').attr('id','selectltl' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_leaf_label_left_top = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n        parent.append('br')\n\n        parent.append('text').style('display','inline').text('E').style('margin-right','4px').style('margin-left','12px')\n        var selectrl = parent.append('select').attr('id','selectrl' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_leaf_label = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n        parent.append('br')\n\n        parent.append('text').style('display','inline').text('F').style('margin-right','4px').style('margin-left','12px')\n        var selectlbl = parent.append('select').attr('id','selectlbl' + container_id ).attr('class','select_node_face').on('change', function(){\n\n            var value =  this.value === 'None' ? false : this.value\n\n            that.viewer.model.settings.display_leaf_label_left_bottom = value\n\n            that.viewer.render(that.viewer.hierarchy)\n\n        })\n\n\n\n        selectltl.selectAll('option').data(options2).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectlbl.selectAll('option').data(options2).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n        selectrl.selectAll('option').data(options2_name).enter().append('option').attr('value', function (d) { return d; }).text(function (d) { return d; });\n\n        this.add_quartet_buttons_single_line(this.menu_tree_p, \"Font size\", \"buton_leaf_label_size_\", this.container_object.update_font_size_leaf_percent)\n\n        parent.append('br')\n\n\n        function selectElement(id, valueToSelect) {\n            let element = document.getElementById(id);\n            element.value = valueToSelect;\n        }\n\n        selectElement('selectr' + container_id, this.viewer.model.settings.display_internal_label == false ? \"None\" : this.viewer.model.settings.display_internal_label )\n        selectElement('selectlb' + container_id, this.viewer.model.settings.display_internal_label_left_bottom == false ? \"None\" : this.viewer.model.settings.display_internal_label_left_bottom )\n        selectElement('selectlt' + container_id, this.viewer.model.settings.display_internal_label_left_top == false ? \"None\" : this.viewer.model.settings.display_internal_label_left_top )\n\n        selectElement('selectrl' + container_id, this.viewer.model.settings.display_leaf_label == false ? \"Default\" : this.viewer.model.settings.display_leaf_label )\n        selectElement('selectlbl' + container_id, this.viewer.model.settings.display_leaf_label_left_bottom == false ? \"None\" : this.viewer.model.settings.display_leaf_label_left_bottom )\n        selectElement('selectltl' + container_id, this.viewer.model.settings.display_leaf_label_left_top == false ? \"None\" : this.viewer.model.settings.display_leaf_label_left_top )\n\n\n    }\n\n    add_quartet_buttons_single_line(parent, label, id, f, aux){\n\n        var f = f || function(){};\n        var aux = aux || null;\n\n        var container = parent.append('div')\n            .style('display', 'flex')\n            .style('align-items', 'center');\n\n        container.append(\"p\").text(label)\n            .style('margin-bottom','0px')\n            .style('font-weight','bold')\n            .style('font-size','small')\n            .style('margin-right','8px')\n\n        var buttons = container.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty1 = buttons.append('button')\n            .attr('class', ' square_button mini')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'first' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n\n        butty_putty1.append('p')\n            .text('- 50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        var butty_putty2 = buttons.append('button')\n            .attr('class', ' square_button mini')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'second' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty2.append('p')\n            .text('- 20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty3 = buttons.append('button')\n            .attr('class', ' square_button mini')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'third' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n\n        butty_putty3.append('p')\n            .text('+ 20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n\n        var butty_putty4 = buttons.append('button')\n            .attr('class', ' square_button mini')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'fourth' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty4.append('p')\n            .text('+ 50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        return buttons\n\n\n\n    }\n\n    add_quartet_buttons(parent, label, id, f, aux){\n\n        var f = f || function(){};\n        var aux = aux || null;\n\n        parent.append(\"p\").text(label)\n            .style('margin-bottom','0px')\n            .style('font-weight','bold')\n\n        var buttons = parent.append('div')\n            .style('display', 'flex')\n            .style('margin-top', '0px')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty1 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'first' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n        butty_putty1.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '12px')\n            .attr('class', ' bi bi-dash ')\n\n        butty_putty1.append('p')\n            .text('-50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        var butty_putty2 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'second' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,-0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n        butty_putty2.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '8px')\n            .attr('class', ' bi bi-dash ')\n\n        butty_putty2.append('p')\n            .text('-20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n        var butty_putty3 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'third' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.20, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty3.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '8px')\n            .attr('class', ' bi bi-plus ')\n\n        butty_putty3.append('p')\n            .text('+20%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n\n\n        var butty_putty4 = buttons.append('button')\n            .attr('class', ' square_button')\n            .style('border-radius', '0px')\n            .style('padding', '2px')\n            .attr('id', id + 'fourth' +  this.container_object.uid )\n            .on(\"click\", (e) =>  f.call(this.container_object,0.50, aux  ) )\n            .style('margin', '2px')\n            .style('flex-grow', '1')\n\n\n\n        butty_putty4.append(\"div\").append('i')\n            .style('color', '#888')\n            .style('font-size', '12px')\n            .attr('class', ' bi bi-plus ')\n\n        butty_putty4.append('p')\n            .text('+50%')\n            .style('font-size', 'xx-small')\n            .style('line-height', 'normal')\n            .style('margin-bottom', '4px')\n\n        return buttons\n\n\n\n    }\n\n    add_slider_UI(parent, label, min, max, current, step, id, f){\n\n        var f = f || function(){};\n\n        parent.append(\"p\").text(label).style('margin-bottom','0px').style('font-weight','bold')\n\n        var d = parent.append('div')\n            .attr(\"class\",\"slidecontainer\")\n\n        var input =  d.append('input').attr(\"class\",\"slider\")\n            .attr('type', 'range' )\n            .attr('min', min )\n            .attr('max', max )\n            .attr('value', current )\n            //.attr('step', step )\n            .attr('id', id + this.container_object.uid )\n            .on('click', (e) => { f(e)} )\n            .style('margin-bottom','12px')\n\n        return input\n\n\n\n    }\n\n    update_slider(slide ,value){\n        slide.attr('value', value);\n    }\n\n    //OLD PHYLO COPY PASTE todo clean\n    // Below are the functions that handle actual exporting:\n    // getSVGString ( svgNode ) and svgString2Image( svgString, width, height, format, callback )\n    getSVGString( svgNode ) {\n        svgNode.setAttribute('xlink', 'http://www.w3.org/1999/xlink');\n        var cssStyleText = getCSSStyles( svgNode );\n        appendCSS( cssStyleText, svgNode );\n\n        var serializer = new XMLSerializer();\n        var svgString = serializer.serializeToString(svgNode);\n        svgString = svgString.replace(/(\\w+)?:?xlink=/g, 'xmlns:xlink='); // Fix root xlink without namespace\n        svgString = svgString.replace(/NS\\d+:href/g, 'xlink:href'); // Safari NS namespace fix\n\n        return svgString;\n\n        function getCSSStyles( parentElement ) {\n            var selectorTextArr = [];\n\n            // Add Parent element Id and Classes to the list\n            selectorTextArr.push( '#'+parentElement.id );\n            for (var c = 0; c < parentElement.classList.length; c++)\n                if ( !contains('.'+parentElement.classList[c], selectorTextArr) )\n                    selectorTextArr.push( '.'+parentElement.classList[c] );\n\n            // Add Children element Ids and Classes to the list\n            var nodes = parentElement.getElementsByTagName(\"*\");\n            for (var i = 0; i < nodes.length; i++) {\n                var id = nodes[i].id;\n                if ( !contains('#'+id, selectorTextArr) )\n                    selectorTextArr.push( '#'+id );\n\n                var classes = nodes[i].classList;\n                for (var c = 0; c < classes.length; c++)\n                    if ( !contains('.'+classes[c], selectorTextArr) )\n                        selectorTextArr.push( '.'+classes[c] );\n            }\n\n            // Extract CSS Rules\n            var extractedCSSText = \"\";\n            for (var i = 0; i < document.styleSheets.length; i++) {\n                var s = document.styleSheets[i];\n\n                try {\n                    if(!s.cssRules) continue;\n                } catch( e ) {\n                    if(e.name !== 'SecurityError') throw e; // for Firefox\n                    continue;\n                }\n\n                var cssRules = s.cssRules;\n                for (var r = 0; r < cssRules.length; r++) {\n                    if ( contains( cssRules[r].selectorText, selectorTextArr ) )\n                        extractedCSSText += cssRules[r].cssText;\n                }\n            }\n\n\n            return extractedCSSText;\n\n            function contains(str,arr) {\n                return arr.indexOf( str ) === -1 ? false : true;\n            }\n\n        }\n\n        function appendCSS( cssText, element ) {\n            var styleElement = document.createElement(\"style\");\n            styleElement.setAttribute(\"type\",\"text/css\");\n            styleElement.innerHTML = cssText;\n            var refNode = element.hasChildNodes() ? element.children[0] : null;\n            element.insertBefore( styleElement, refNode );\n        }\n    }\n\n    svgString2Image( svgString, width, height, format, callback ) {\n        var format = format ? format : 'png';\n\n        var imgsrc = 'data:image/svg+xml;base64,'+ btoa( unescape( encodeURIComponent( svgString ) ) ); // Convert SVG string to dataurl\n\n        var canvas = document.createElement(\"canvas\");\n        var context = canvas.getContext(\"2d\");\n\n        canvas.width = width;\n        canvas.height = height;\n\n        var image = new Image;\n        image.onload = function() {\n\n            context.clearRect ( 0, 0, width, height );\n            context.fillStyle = \"#ffffff\";\n            context.fillRect(0, 0, width, height);\n            context.drawImage(image, 0, 0, width, height);\n\n            canvas.toBlob( function(blob) {\n                var filesize = Math.round( blob.length/1024 ) + ' KB';\n                if ( callback ) callback( blob, filesize );\n            });\n        };\n        image.src = imgsrc;\n    }\n\n    addLogo(svg) {\n        // TODO load with ajax\n        var logo_xml = '<svg id=\"exportLogo\" x=\"0\" y=\"0\"><g id=\"g4169\"> <path d=\"m 29.606259,23.679171 1.905511,0 c 0.193778,0.617882 0.290669,1.188505 0.290672,1.711869 0.466506,-0.545171 1.022728,-0.99222 1.668668,-1.341146 0.653108,-0.348904 1.295455,-0.523362 1.927043,-0.523373 0.976073,1.1e-5 1.86603,0.261698 2.669869,0.78506 0.810999,0.523383 1.442581,1.221215 1.894747,2.093495 0.459321,0.865028 0.688986,1.802739 0.688998,2.813134 -1.2e-5,1.010407 -0.229677,1.951752 -0.688998,2.824038 -0.452166,0.865023 -1.083748,1.559219 -1.894747,2.082592 -0.803839,0.516105 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-0.473692,10e-6 -0.96891,0.243524 -1.485653,0.730544 -0.509576,0.487036 -0.925846,1.05039 -1.24881,1.69006 -0.315795,0.632417 -0.47369,1.177598 -0.473687,1.635543 l 0,5.53904 -1.711731,0\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4147\" /> <path d=\"m 53.581256,23.679171 1.776325,0 3.423461,8.472114 3.337338,-8.472114 1.797856,0 -6.4163,16.388142 -1.819387,0 2.22848,-5.658979 -4.327773,-10.729163\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4149\" /> <path d=\"m 67.415055,34.75725 -1.71173,0 0,-16.279106 1.71173,0 0,16.279106\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4151\" /> <path d=\"m 80.882824,26.361462 c 0.523914,0.872297 0.785877,1.824546 0.785889,2.856748 -1.2e-5,1.032215 -0.261975,1.984463 -0.785889,2.856749 -0.523937,0.872291 -1.234467,1.562854 -2.131589,2.071689 -0.897143,0.501566 -1.873223,0.752348 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style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee Bold\" id=\"path4153\" /> <path d=\"m 84.532366,34.0049 c -2e-6,-0.247148 0.08612,-0.457951 0.258374,-0.63241 0.172247,-0.181725 0.380382,-0.272588 0.624405,-0.27259 0.244018,2e-6 0.452152,0.09087 0.624405,0.27259 0.179424,0.174459 0.269137,0.385262 0.269141,0.63241 -4e-6,0.239881 -0.08972,0.454318 -0.269141,0.643314 -0.17943,0.181727 -0.387564,0.27259 -0.624405,0.27259 -0.236846,0 -0.444981,-0.09087 -0.624405,-0.27259 -0.172252,-0.188996 -0.258376,-0.403433 -0.258374,-0.643314\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee\" id=\"path4155\" /> <path d=\"m 89.527608,21.08411 c -10e-7,-0.239866 0.08253,-0.447035 0.247608,-0.621507 0.172248,-0.174444 0.380383,-0.261673 0.624406,-0.261687 0.23684,1.4e-5 0.437798,0.08724 0.602874,0.261687 0.172246,0.174472 0.258371,0.381641 0.258374,0.621507 -3e-6,0.247162 -0.08254,0.457964 -0.247609,0.632409 -0.165075,0.167203 -0.369621,0.250796 -0.613639,0.250783 -0.244023,1.3e-5 -0.452158,-0.08358 -0.624406,-0.250783 -0.165074,-0.174445 -0.247609,-0.385247 -0.247608,-0.632409 m 1.356465,13.67314 -0.968904,0 0,-11.056271 0.968904,0 0,11.056271\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee\" id=\"path4157\" /> <path d=\"m 99.593447,23.526521 c 0.753583,1.1e-5 1.474873,0.149027 2.163883,0.447048 0.68899,0.298043 1.28468,0.701476 1.78709,1.210302 0.50238,0.508844 0.90072,1.115812 1.19499,1.820905 0.29424,0.705108 0.44137,1.442918 0.44139,2.213434 -2e-5,0.777797 -0.14715,1.519242 -0.44139,2.224339 -0.29427,0.705104 -0.69261,1.312071 -1.19499,1.820905 -0.50241,0.501568 -1.0981,0.905001 -1.78709,1.210301 -0.68901,0.298033 -1.4103,0.447049 -2.163883,0.447049 -1.543077,0 -2.860068,-0.556084 -3.950979,-1.668254 -1.090916,-1.112166 -1.636373,-2.456945 -1.636372,-4.03434 -10e-7,-1.032202 0.247608,-1.984451 0.742827,-2.856748 0.502393,-0.87955 1.180625,-1.570111 2.0347,-2.071688 0.861243,-0.508825 1.797849,-0.763242 2.809824,-0.763253 m -4.629212,5.691689 c -2e-6,1.301171 0.452153,2.416973 1.356467,3.347412 0.911483,0.923175 2.009573,1.38476 3.294277,1.384759 1.284681,10e-7 2.379191,-0.461584 3.283511,-1.384759 0.91147,-0.930439 1.36721,-2.046241 1.36722,-3.347412 -1e-5,-1.293889 -0.45575,-2.402423 -1.36722,-3.325603 -0.90432,-0.923164 -1.99883,-1.38475 -3.283511,-1.38476 -1.284704,10e-6 -2.382794,0.461596 -3.294277,1.38476 -0.904314,0.92318 -1.356469,2.031714 -1.356467,3.325603\" style=\"font-size:22.18883514px;font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;text-align:start;line-height:125%;letter-spacing:0px;word-spacing:0px;writing-mode:lr-tb;text-anchor:start;fill:#000000;fill-opacity:1;stroke:none;font-family:Sawasdee;-inkscape-font-specification:Sawasdee\" id=\"path4159\" /> </g> <g id=\"g4014\" transform=\"translate(12.84,20.592727)\"> <g transform=\"translate(0,-0.065)\" id=\"g3992\"> <polygon style=\"fill:#939598\" id=\"polygon461\" points=\"5.7,0.23 11.86,0.23 11.86,1.65 7.12,1.65 7.12,6.04 11.86,6.04 11.86,7.46 11.86,7.46 5.7,7.46 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon463\" points=\"0,7.08 3.51,7.08 3.51,8.49 1.43,8.49 1.45,15.84 12.68,15.84 12.68,17.26 12.68,17.26 0.04,17.26 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon465\" points=\"10.49,11.02 10.49,12.44 10.49,12.44 2.84,12.44 2.84,7.79 4.26,7.79 4.26,11.02 \" class=\"cls-2\" transform=\"translate(0,-0.15225398)\" /> <polygon style=\"fill:#bcbec0\" id=\"polygon467\" points=\"4.26,4.55 4.26,7.79 4.26,7.79 2.84,7.79 2.84,3.13 6.41,3.13 6.41,4.55 \" class=\"cls-3\" transform=\"matrix(1,0,0,0.85463687,0,0.4549866)\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-3\" width=\"1.4240631\" height=\"1.7319686\" x=\"2.8396611\" y=\"7.0799503\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-6\" width=\"1.3864813\" height=\"1.6934805\" x=\"5.7012329\" y=\"2.9206221\" /> </g> <g id=\"g4005\"> <g id=\"g3984\"> <polygon class=\"cls-2\" points=\"94.93,12.33 94.93,10.91 99.87,10.91 99.87,6.46 94.93,6.46 94.93,5.04 101.29,5.04 101.29,12.33 101.29,12.33 \" id=\"polygon453\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"94.72,17.36 94.72,15.94 104.87,15.94 104.9,5.41 102.74,5.41 102.74,3.99 106.32,3.99 106.29,17.36 106.29,17.36 \" id=\"polygon455\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"95.51,1.42 95.51,0 103.45,0 103.45,4.7 103.45,4.7 102.03,4.7 102.03,1.42 \" id=\"polygon457\" style=\"fill:#939598\" /> <polygon class=\"cls-3\" points=\"102.03,7.97 102.03,4.7 103.45,4.7 103.45,9.39 103.45,9.39 100.65,9.39 100.65,7.97 \" id=\"polygon459\" style=\"fill:#bcbec0\" /> <rect y=\"3.9876499\" x=\"102.02941\" height=\"1.4238259\" width=\"1.4579451\" id=\"rect3926\" style=\"fill:#939598;fill-opacity:1\" /> <rect y=\"7.884686\" x=\"99.887817\" height=\"1.6934805\" width=\"1.397205\" id=\"rect3926-7\" style=\"fill:#939598;fill-opacity:1\" /> </g> </g> </g> </g> </svg>';\n\n\n        svg.append(\"g\").html(logo_xml);\n\n    }\n\n    add_empty_message(){\n\n\n        this.container_d3.selectAll(\".empty_message\").remove()\n\n\n        /*if (phylo.phylo_embedded){\n\n            if (phylo.bound_container[0]==this.container_object){\n                tooltip_object[0].show()\n                tooltip_object[3].show()\n                }\n\n        }\n\n         */\n\n\n\n        this.viewer.svg_d3.node().append('g')\n            .attr(\"class\", 'empty_message')\n            .attr('width',this.viewer.width )\n            .attr(\"transform\", \"translate(\"+ (this.viewer.width/2)+\",\" + (this.viewer.height/2)  + \")\")\n            .append(\"text\")\n            .attr(\"fill\", \"#333\")\n            .attr('text-anchor', 'middle')\n            .style('font-size', '1.2em')\n            .html('No tree here! You can <a href=\"#\" id=\"add_tree_link' + this.container_object.uid +'\">add a tree</a> or use the examples below.')\n\n        document.querySelector('#add_tree_link'+ this.container_object.uid).addEventListener('click', event => {\n            $('#exampleModal' + this.container_object.uid).modal('show')\n        });\n\n\n\n        this.viewer.svg_d3.node().append('text')\n            .attr(\"class\", 'empty_message')\n            .attr(\"transform\", \"translate(\"+ (this.viewer.width/2)+\",\" + (this.viewer.height/2 + 24)  + \")\")\n            .attr('text-anchor', 'middle')\n            .attr(\"fill\", \"#bbb\")\n            .html(\"Ready to use examples: <a id='ex1\"+ this.container_object.uid +\"' style='cursor:pointer;text-decoration: underline'> Tree collection #1</a> - <a style='cursor:pointer;text-decoration: underline' id='ex2\"+ this.container_object.uid +\"'>Tree collection #2</a> \")\n\n\n\n            document.querySelector('#ex1'+ this.container_object.uid).addEventListener('click', event => {\n                this.container_object.add_tree(this.examples[\"LRF1\"],{'data_type': 'nhx'})\n                this.container_object.add_tree(this.examples[\"r2t\"])\n                this.container_object.add_tree(this.examples[\"unrooted1\"])\n                this.container_object.add_tree(this.examples[\"small1\"])\n\n\n                this.api.start()\n            });\n\n        document.querySelector('#ex2'+ this.container_object.uid).addEventListener('click', event => {\n\n            this.container_object.add_tree(this.examples[\"LRF2\"],{'data_type': 'nhx'})\n            this.container_object.add_tree(this.examples[\"rokas\"])\n            this.container_object.add_tree(this.examples[\"nhx\"],{'data_type': 'nhx'})\n            this.container_object.add_tree(this.examples[\"unrooted2\"])\n            this.container_object.add_tree(this.examples[\"small2\"])\n            this.container_object.add_tree(this.examples[\"stack\"],{'data_type': 'json', 'use_branch_lenght': false, 'show_histogram':true, 'collapse_level': 2})\n            this.api.start()\n        });\n\n    }\n\n\n}\n\n//# sourceURL=webpack://PhyloIO/./src/interface.js?");
 
 /***/ }),
 
@@ -8736,7 +8624,17 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Model)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var minhashjs__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! minhashjs */ \"./node_modules/minhashjs/index.js\");\n/* harmony import */ var biojs_io_newick__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! biojs-io-newick */ \"./node_modules/biojs-io-newick/src/index.js\");\n\n\n\n\nvar uid_model = 0\nvar uid_untitle_counter = 0\n;\nconst { parse_nhx } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\")\n\nclass Model {\n\n    constructor(data, settings, from_raw_data = true) {\n\n        this.zoom;\n        this.settings = {\n            'uid': null,\n            'domain_extended_data' : {},\n            'extended_data_type' : {'Topology': 'num'},\n            'labels' : {'leaf' : new Set(), 'node':new Set()},\n            'colorlabels' :{'leaf' : new Set(), 'node':new Set([\"Topology\"])},\n            'display_leaves' : true,\n            'mirror': false,\n            'name': null,\n            'first_time_render': true,\n            'data_type' : 'newick',\n            'use_branch_lenght' : true,\n            'show_tooltips' : false,\n            'subsample_label' : true,\n            'display_internal_label' : false,\n            'display_internal_label_left_top' : false,\n            'display_internal_label_left_bottom' : false,\n            'display_duplication' : false,\n            'has_branch_lenght' : true,\n            'has_duplications' : false,\n            'dessimode': false,\n            'multiple_search':false,\n            'show_histogram' : false,\n            'align_tip' : false,\n            'use_meta_for_leaf' : true,\n            'use_meta_for_node' : false,\n            'has_histogram_data' : false,\n            'similarity': [],\n            'style': {\n                'font_size_internal' : 14,\n                'color_accessor' : {'leaf' : null, 'node': \"Topology\"},\n                'color_extent_min': {'leaf' : {}, 'node': {\"Topology\":0}},\n                'color_extent_max':{'leaf' : {}, 'node': {\"Topology\":1}},\n                'number_domain':{'leaf' : '3', 'node': '5'},\n                'color_domain':{'leaf' : ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC'], 'node': ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC']},\n                'color_domain_default':{'leaf' : ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC'], 'node': ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC']},\n        },\n            'tree': {\n                'node_vertical_size' : 30,\n                'node_horizontal_size' : 40,\n                'node_radius' : 6, // move to style\n                'line_width' : 3,// move to style\n                'font_size':14, // move to style\n                'max_depth' : 0,\n            },\n            'collapse_level': 0,\n            'stack' : {\n                'type': 'genes',//'events',\n                'showHistogramValues' : false,\n                'showHistogramSummaryValue' : true,\n                'legendTxtSize' : 12,\n                'margin' : 8,\n                'xInitialRightMargin' : 45,\n                'stackHeight' : 120,\n                'stackWidth' : 30,\n                'maxStackHeight': 'max', // ratio -> stack height fixed | max -> largest data = stack height\n                'has_support' : false,\n                'only_support' : false,\n\n            },\n        }\n\n        if (settings) {\n\n            for(var key in settings) {\n\n                if (key == 'labels_array_leaf'){\n                    var value = settings[key];\n                    this.settings['labels']['leaf'] = new Set(value);\n                }\n                if (key == 'labels_array_node'){\n                    var value = settings[key];\n                    this.settings['labels']['node'] = new Set(value);\n                }\n                if (key == 'colorlabels_array_leaf'){\n                    var value = settings[key];\n                    this.settings['colorlabels']['leaf'] = new Set(value);\n                }\n\n                if (key == 'colorlabels_array_node'){\n                    var value = settings[key];\n                    this.settings['colorlabels']['node'] = new Set(value);\n                }\n\n                else{\n                    var value = settings[key];\n                    this.settings[key] = value;\n                }\n\n\n            }\n\n        }\n\n        this.settings.name = this.settings.name ? this.settings.name : \"Untitled \" + uid_untitle_counter++\n\n        this.uid = null\n        this.input_data = data;\n        this.leaves = []\n\n\n\n        if (from_raw_data){\n            this.uid = uid_model++;\n            this.settings.uid = this.uid;\n            this.data = this.factory(this.parse());\n        }\n        else{\n            this.uid = settings.uid;\n            this.settings.uid = this.uid;\n            this.data = data\n            data.leaves = this.get_leaves(data)\n            this.traverse(data, function(n,c){\n                n.leaves = this.get_leaves(n)\n            })\n        }\n\n        this.data.root = true;\n        this.data.elementS = {}\n        this.data.elementBCN = {}\n        this.rooted = this.data.children.length !== 3\n        this.big_tree = (this.leaves.length > 500)\n\n        // check that histogram data is present and compute\n        if(this.settings.show_histogram && this.data.evolutionaryEvents) {\n            this.settings.has_histogram_data  = true;\n            this.largestGenome =  0;\n            this.largestEvents = 0; // todo\n\n            this.traverse(this.data , function(n,c){\n\n                let g = n.nr_hogs ? n.nr_hogs : n.nr_proteins\n                if (g > this.largestGenome ) {this.largestGenome = g;}\n\n                if (n.evolutionaryEvents){\n\n                    var ga = n.evolutionaryEvents.gained ? n.evolutionaryEvents.gained : 0\n                    var l = n.evolutionaryEvents.lost ? n.evolutionaryEvents.lost : 0\n                    var d = n.evolutionaryEvents.duplications ? n.evolutionaryEvents.duplications : 0\n\n                    let e = ga + l + d\n\n\n                    if (e > this.largestEvents ) {this.largestEvents = e;}\n\n                }\n\n                if (this.settings.stack.has_support){\n\n                    let g_support = n.nr_hogs_support ? n.nr_hogs_support : n.nr_proteins_support\n                    if (g_support > this.largestGenome_support ) {this.largestGenome_support = g_support;}\n\n                    if (n.evolutionaryEvents_support){\n\n\n                        var ga_support = n.evolutionaryEvents_support.gained ? n.evolutionaryEvents_support.gained : 0\n                        var l_support = n.evolutionaryEvents_support.lost ? n.evolutionaryEvents_support.lost : 0\n                        var d_support = n.evolutionaryEvents_support.duplications ? n.evolutionaryEvents_support.duplications : 0\n\n                        let e_support = ga_support + l_support + d_support\n\n                        if (e_support > this.largestEvents_support ) {this.largestEvents_support = e_support;}\n\n                    }\n                }\n\n\n\n            })\n\n\n        }\n\n    }\n\n    get_name(){\n        return this.settings.name\n    }\n\n    set_name(name){\n        this.settings.name = name\n    }\n\n    traverse(o,func_pre, func_post) {\n\n        if (func_pre){\n            func_pre.apply(this,[o,o[\"children\"]])\n        }\n\n        if(o[\"children\"]){\n\n            for (var c in o[\"children\"] ) {\n\n                var child = o[\"children\"][c]\n\n                child = this.traverse(child, func_pre, func_post)\n\n                if (func_post) {\n                    func_post.apply(this,[child,o])\n                }\n\n\n            }\n\n\n        }\n\n        return o\n\n    }\n\n    traverse_hierarchy(o,func_pre, func_post) {\n\n        var children = o[\"children\"] ? o[\"children\"] : o[\"_children\"]\n\n        if (func_pre){\n            func_pre.apply(this,[o,children])\n        }\n\n        if(children ){\n\n            for (var c in children) {\n\n                var child = children[c]\n\n                child = this.traverse_hierarchy(child, func_pre, func_post)\n\n                if (func_post) {\n                    func_post.apply(this,[child,o])\n                }\n\n\n            }\n\n\n        }\n\n        return o\n\n    }\n\n    set_parent(node,parent){\n        node.parent = parent\n    }\n\n    set_cumulated_length(node, children){\n        if (node.parent) {\n            node.depth = node.parent.depth + 1\n            node.distance_to_root = node.parent.distance_to_root + node.branch_length\n        }\n        else{\n            node.distance_to_root = 0\n        node.depth = 0}\n\n    }\n\n    factory(json){ // todo do one traversal with all in one function\n\n        var p;\n\n        //has_branch_lenght\n        this.settings.has_branch_lenght = false;\n\n        json.children.forEach((child) => {\n            if (typeof child.branch_length != 'undefined') { this.settings.has_branch_lenght = true; }\n        })\n\n        if (this.settings.has_branch_lenght) {\n            this.settings.labels['node'].add('Length')\n            this.settings.colorlabels['node'].add('Length')\n            this.settings.extended_data_type['Length'] = 'num'\n\n            this.settings.style.color_extent_max['node']['Length'] = 0;\n            this.settings.style.color_extent_min['node']['Length'] = 1000000000;\n        }\n\n\n        // if branch size is not used put 1\n        if (!this.settings.has_branch_lenght) {\n            p = this.traverse(json, function(n,c){n.branch_length=1})\n            p.branch_length = 0 // root\n        }\n        else{ // sanity check\n            p = this.traverse(json, function(n,c){if (typeof n.branch_length == 'undefined') {n.branch_length=1} })\n            if (typeof p.branch_length == 'undefined') {p.branch_length=1}\n        }\n\n        // set parent attribute\n        p = this.traverse(json, null , this.set_parent)\n\n        // compute cumulated  lenght\n        p = this.traverse(p, this.set_cumulated_length , null)\n\n        this.traverse(p, function(n,c){\n\n            n.extended_informations = {}\n            n.elementS = {}\n            n.elementBCN = {}\n\n            if(n.branch_length){\n                n.extended_informations['Length'] = n.branch_length;\n                if (this.settings.style.color_extent_max['node']['Length'] < n.branch_length){\n                    this.settings.style.color_extent_max['node']['Length'] = n.branch_length\n                }\n\n                if (this.settings.style.color_extent_min['node']['Length'] > n.branch_length){\n                    this.settings.style.color_extent_min['node']['Length'] = n.branch_length\n                }\n            }\n\n            if (typeof c !== 'undefined' && typeof n.name !== 'undefined' && n.name !== \"\" ) {\n                n.extended_informations['Data'] = n.name;\n                this.settings.labels['node'].add('Data')\n                this.settings.extended_data_type['Data'] = 'num'\n\n                if (!isNaN(n.name)){\n\n                    if (!this.settings.colorlabels['node'].has('Data')){\n                        this.settings.colorlabels['node'].add('Data');\n                        this.settings.style.color_extent_max['node']['Data'] = 0;\n                        this.settings.style.color_extent_min['node']['Data'] = 1000000000;\n                    }\n\n                    if (this.settings.style.color_extent_max['node']['Data'] <n.name){\n                        this.settings.style.color_extent_max['node']['Data'] = n.name\n                    }\n\n                    if (this.settings.style.color_extent_min['node']['Data'] > n.name){\n                        this.settings.style.color_extent_min['node']['Data'] = n.name\n                    }\n\n                }\n\n                else {this.settings.extended_data_type['Data'] = 'cat'}\n            }\n\n            if(n.data_nhx && Object.keys(n.data_nhx).length > 0){\n\n                Object.entries(n.data_nhx).forEach(([key, value]) => {\n\n                    this.settings.labels['node'].add(key)\n\n                    switch(key){\n                        case 'Ev':\n                            if (value == 'duplication') {\n                                n.duplication = true\n                                this.settings.has_duplications = true;\n                            }\n                            n.extended_informations.events = value\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type['Ev'] = 'cat'\n                            break;\n                        case 'DD':\n                        case 'D':\n                            if (value == 'Y') {\n                                n.duplication = true\n                                this.settings.has_duplications = true;\n\n                            }\n                            else if (value == 'N'){\n                                n.duplication = false\n                                this.settings.has_duplications = true;\n                            }\n                            n.extended_informations.events = value\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type['D'] = 'cat'\n                            break;\n                        default:\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type[key] = 'cat'\n                            break;\n                    }\n                });\n\n\n            }\n\n\n            if (n.depth > this.settings.tree.max_depth){\n                this.settings.tree.max_depth = n.depth\n            }\n            if (!(n.hasOwnProperty('children'))){\n                this.leaves.push(n)\n                n.correspondingLeaf = {}\n\n            }\n\n            n.leaves = this.get_leaves(n)\n\n        })\n\n        this.settings.suggestions = [] // autocomplete name\n        this.traverse(json, function(n,c){\n            if (n.name !== ''){this.settings.suggestions.push(n.name)}}) //todo add id also and ncBI and more + check empty cfucntion\n        return p\n    }\n\n    build_hierarchy_mockup(){\n        return d3__WEBPACK_IMPORTED_MODULE_0__.hierarchy(this.data, d => d.children );\n    }\n\n    parse(){\n\n        if (this.settings.data_type === \"newick\") {\n            return biojs_io_newick__WEBPACK_IMPORTED_MODULE_2__.parse_newick(this.input_data);\n        }\n\n        else if (this.settings.data_type === \"nhx\") {\n            return parse_nhx(this.input_data);\n        }\n\n        else if (this.settings.data_type === \"json\") {\n            return this.input_data\n        }\n\n\n\n\n    }\n\n    collapse(data, action){\n        if (!data.children){return}\n        if (action) {data.collapse = true}\n        else if (action == false){data.collapse = false}\n        else{data.collapse ? data.collapse = false : data.collapse = true;}\n\n    }\n\n    collapseAll(data, action){\n        if (action) {\n            this.traverse(data, (n,c) => {\n                this.collapse(n, true)\n                //n.collapse = true\n            } , null)}\n        else if (action == false){\n            this.traverse(data, (n,c) => {\n                this.collapse(n, false)\n                //n.collapse = false\n            } , null)}\n\n\n    }\n\n    get_all_collapse(data){\n\n        var collapsed = []\n\n        this.traverse(data, (n,c) => {if (n.collapse){\n                collapsed.push(n)\n            }}, null)\n\n        return collapsed\n\n    }\n\n    apply_collapse_to_list(collapsed){\n        this.traverse(this.data, (n,c) => {\n            if (collapsed.includes(n)){\n                this.collapse(n, true)\n            }\n            else{\n                this.collapse(n, false)\n            }\n        } , null)\n    }\n\n    swap_subtrees(data){\n         var e = data.children.pop()\n        data.children.unshift(e)\n        data.leaves = this.get_leaves(data)\n    }\n\n    unswap_subtrees(data){\n        var e = data.children.shift()\n        data.children.push(e)\n        data.leaves = this.get_leaves(data)\n\n    }\n\n    reroot(data){\n\n        // extract meta data (zoom)\n        var meta = this.zoom;\n\n        // create new root r\n\n        var root = {\"children\": [], \"name\": \"\", \"branch_length\": 0, \"extended_informations\": {}}\n\n        for (var key in data.extended_informations) {\n            if (data.extended_informations.hasOwnProperty(key)) {\n                root.extended_informations[key] =  null\n            }\n        }\n\n        // source and target node of the clicked edges\n        var parent = data.parent\n        var child = data\n\n        // insert new root node between target and source and connect\n        root.children.push(child)\n        parent.children.push(root)\n        this.set_parent(child, root )\n        this.set_parent(root, parent )\n        const index = parent.children.indexOf(child);\n        if (index > -1) {\n            parent.children.splice(index, 1);\n        }\n\n        // ajust distance now that distance target/source is splitted in two\n        var old_distance = child.branch_length\n\n        child.branch_length = old_distance/2\n        child.extended_informations['Length'] = old_distance/2\n\n        parent.branch_length_before_reverse = parent.branch_length\n        parent.branch_length = old_distance /2\n        parent.extended_informations['Length'] = old_distance/2\n\n\n\n        // While we are at the old root reverse child/parent order\n        var parent = parent\n        var child = root\n        var stack = []\n\n        while (parent.root != true) {\n\n            stack.push([parent,child])\n\n            child = parent\n            parent = parent.parent\n\n\n            parent.branch_length_before_reverse = parent.branch_length\n            if (child.branch_length_before_reverse){\n                parent.branch_length = child.branch_length_before_reverse\n                parent.extended_informations['Length'] = child.branch_length_before_reverse\n            }\n            else{\n                parent.branch_length = child.branch_length\n                parent.extended_informations['Length'] = child.branch_length\n            }\n\n\n        }\n        stack.push([parent,child])\n        for (var e in stack){\n            var p = stack[e][0]\n            var c = stack[e][1]\n\n            this.reverse_order(p,c)\n\n        }\n\n        // Remove old root\n\n        var old_root = parent\n        var leading_branch = parent.parent\n\n\n\n        if (old_root.children.length == 1){\n\n            const ce = leading_branch.children.indexOf(old_root);\n            if (ce > -1) {\n                leading_branch.children.splice(ce, 1);\n            }\n\n            var i = 0,len = old_root.children.length;\n            while (i < len) {\n                let c = old_root.children[i]\n                c.parent = leading_branch\n                leading_branch.children.push(c)\n                i++\n            }\n\n            old_root = null\n\n\n\n        }\n\n        // For multifurcation we need to keep the root\n        else {\n            old_root.root = false\n            old_root.branch_length = leading_branch.branch_length\n            parent.extended_informations['Length'] = leading_branch.branch_length\n        }\n\n\n        // configure new root\n        root.zoom = meta\n        this.data = root;\n        this.data.root = true;\n\n        root.leaves = this.get_leaves(root)\n\n\n        this.traverse(root, function(n,c){\n            n.leaves = this.get_leaves(n)\n        })\n\n\n\n    }\n\n    trim(branch){\n\n        // source and target node of the clicked edges\n        var parent = branch.parent\n        var child = branch\n\n        var untrim_data = {\n            \"parent\" : null,\n            \"floating\" : null,\n            \"untrim_data\" : null,\n            \"index\": null,\n            \"root_mode\": false,\n        }\n\n\n        if (parent.children.length > 2) {\n            untrim_data.index = this.detach_child(parent,child)\n\n            untrim_data.parent = parent;\n            untrim_data.floating = false;\n            untrim_data.child =  child;\n\n            return untrim_data;\n        }\n\n        else{\n\n            if (typeof parent.parent == 'undefined'){ // parent is root\n                untrim_data.root_mode = true;\n\n                var sibling = parent.children[0] == child ? parent.children[1] : parent.children[0]\n                untrim_data.index = this.detach_child(parent, sibling)\n\n                this.data = sibling;\n\n                untrim_data.parent = null;\n                untrim_data.floating = parent;\n                untrim_data.child =  sibling;\n\n                return untrim_data;\n\n            }\n\n            else{\n\n                this.detach_child(parent.parent, parent)\n                var sibling = parent.children[0] == child ? parent.children[1] : parent.children[0]\n                untrim_data.index = this.detach_child(parent, sibling)\n                this.attach_child(parent.parent, sibling)\n\n                untrim_data.parent = parent.parent;\n                untrim_data.floating = parent;\n                untrim_data.child =  sibling;\n\n                return untrim_data;\n\n            }\n\n\n        }\n\n    }\n\n    untrim(parent, floating, child, index, root_mode){\n\n        if (floating != false){\n            if (root_mode){\n                this.data = floating\n                this.attach_child(floating,child, index)\n\n            }else{\n                this.detach_child(parent,child)\n                this.attach_child(parent,floating)\n                this.attach_child(floating,child, index)\n            }\n\n        }\n        else {\n            this.attach_child(parent,child, index)\n        }\n    }\n\n    detach_child(parent, child){\n        var index = parent.children.indexOf(child);\n        if (index > -1) {\n            parent.children.splice(index, 1);\n        }\n        return index\n    }\n\n    attach_child(parent,child_to_adopt, index){\n\n        if (typeof index !== 'undefined') {\n            parent.children.splice( index, 0, child_to_adopt );\n            child_to_adopt.parent = parent;\n\n        } else {\n            parent.children.push(child_to_adopt);\n            child_to_adopt.parent = parent;\n        }\n\n\n    }\n\n    interleave_node(parent, to_insert,child){\n        this.detach_child(parent, child)\n        this.attach_child(parent,to_insert)\n        this.attach_child(to_insert, child)\n    }\n\n    store_zoomTransform(zoom){\n\n        this.zoom = {\n            \"k\":zoom.k,\n            \"x\":zoom.x,\n            \"y\":zoom.y,\n        };\n    }\n\n    /**\n     Description:\n     Creates list of leaves of each node in subtree rooted at v\n\n     Note:\n     Difference between deep leaf list and leaves in:\n     (A:0.1,B:0.2,(C:0.3,D:0.4):0.5);\n     - Root has leaves: A, B, C and D (terminal leaves)\n     - Root has deep leaves: A, B, C, D and CD (terminal leaves + intermediate leaves)\n     */\n    createDeepLeafList(filter) {\n\n        function is_leaf(str) {\n            return !str.includes(\"||\");\n        }\n\n         var build_deepLeafList = function(child, node){\n\n             if ( child.hasOwnProperty('children') ){\n                 var dp = child.deepLeafList.filter(is_leaf).sort()\n                 if (!dp.every((e) => e === '')){\n                     child.deepLeafList.push(dp.join('||'));\n                 }\n\n             }\n\n             node.deepLeafList = node.deepLeafList.concat(child.deepLeafList)\n        }\n\n        var build_deepLeafLeaves = function(node,children){\n\n             if (!(node.hasOwnProperty('children') )){\n\n                 if (typeof filter != 'undefined') {\n                     if (filter.includes(node.name)){\n                         node.deepLeafList = [node.name]\n                     }\n                     else{\n                         node.deepLeafList = []\n                     }\n\n                 }\n                 else{\n                     node.deepLeafList = [node.name]\n                 }\n\n             }\n             else {\n                 node.deepLeafList = []\n             }\n\n\n        }\n\n        this.traverse(this.data, build_deepLeafLeaves, build_deepLeafList)\n\n    }\n\n    createMinHash(){\n\n        var assign_hash = function(node,children){\n\n            node.min_hash = new minhashjs__WEBPACK_IMPORTED_MODULE_1__.MinHash.MinHash()\n            node.deepLeafList.map(function(w) { node.min_hash.update(w) });\n        }\n\n        this.traverse(this.data, assign_hash, null)\n    }\n\n    removeMinHash(){\n\n        var remove_hash = function(node,children){\n\n            node.min_hash = null\n        }\n\n        this.traverse(this.data, remove_hash, null)\n\n    }\n\n    reverse_order(parent,child) {\n\n        child.children.push(parent)\n        parent.parent =child\n\n        const b = parent.children.indexOf(child);\n        if (b > -1) {\n            parent.children.splice(b, 1);\n        }\n\n    }\n\n    get_leaves(node){\n\n\n        var l = []\n\n        this.traverse(node, function(n,c){\n            if (!(n.hasOwnProperty('children'))){\n                l.push(n)\n            }\n\n\n    })\n        return l\n    }\n\n    remove_circularity(){ // safe my model\n        var data = Object.assign({}, this.data);\n\n        this.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n            n.correspondingLeaf = {}\n            n.elementBCN = null})\n\n        return data\n    }\n\n    remove_circularity_only_parent_and_leaves(){ // safe my model\n        var data = Object.assign({}, this.data);\n\n        this.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n        })\n\n        return data\n    }\n\n    add_circularity_back(){\n\n        this.data.leaves = this.get_leaves(this.data)\n\n        this.traverse(this.data, function(n,c){n.leaves = this.get_leaves(n)}, this.set_parent)\n\n\n    }\n\n    add_meta_leaves(meta, headers, api){\n\n        // headers: column_name -> type\n\n        Object.keys(headers).forEach(item => {\n            if (item != 'id' || item != 'Length' ) {\n\n                this.settings.extended_data_type[item] = headers[item]\n                this.settings.domain_extended_data[item] = []\n                this.settings.labels['leaf'].add(item)\n                this.settings.colorlabels['leaf'].add(item)\n\n                if (headers[item] == 'num'){\n                    this.settings.style.color_extent_max['leaf'][item] = 0\n                    this.settings.style.color_extent_min['leaf'][item] = 100000\n                }\n            }\n\n        })\n\n            this.get_leaves(this.data).forEach(d => {\n            if (d.name in meta){\n\n                Object.entries(meta[d.name]).forEach(item => {\n                    if (item[0] != 'id'){\n\n                        d.extended_informations[item[0]]= item[1]\n\n                        if (this.settings.extended_data_type[item[0]] == 'num' && !isNaN(item[1])) {\n\n                            item[1] = item[1].toString().indexOf('.') != -1 ? parseFloat(item[1]) : parseInt(item[1])\n\n                            if (this.settings.style.color_extent_max['leaf'][item[0]] < item[1]) {\n                                this.settings.style.color_extent_max['leaf'][item[0]] = item[1]\n                            }\n\n                            if (this.settings.style.color_extent_min['leaf'][item[0]] > item[1]) {\n                                this.settings.style.color_extent_min['leaf'][item[0]] = item[1]\n                            }\n\n                        }\n\n                        if (this.settings.extended_data_type[item[0]] == 'cat'){\n\n                            var cs = api.get_color_scale(item[0])\n                            cs.add_value_to_map(item[1])\n\n                            this.settings.domain_extended_data[item[0]].push(item[1])\n                        }\n\n                    }\n\n                })\n\n            }\n\n        })\n\n\n        Object.keys(headers).forEach(item => {\n            if (item != 'id' || item != 'Length' ) {\n\n\n                if (headers[item] == 'cat'){\n                    api.get_color_scale(item).update()\n\n                }\n            }\n\n        })\n\n\n\n    }\n\n    add_meta_nodes(meta, headers, api){\n\n\n        Object.keys(headers).forEach(item => {\n            if (item != 'id' || item != 'Length' ) {\n                this.settings.extended_data_type[item] = headers[item]\n                this.settings.domain_extended_data[item] = []\n                this.settings.labels['node'].add(item)\n                this.settings.colorlabels['node'].add(item)\n\n                if (headers[item] == 'num'){\n                    this.settings.style.color_extent_max['node'][item] = 0\n                    this.settings.style.color_extent_min['node'][item] = 100000\n                }\n            }\n\n        })\n\n\n        this.traverse(this.data, function(n,c){\n\n            if (n.extended_informations['Data'] in meta){\n\n                Object.entries(meta[n.extended_informations['Data']]).forEach(item => {\n                    if (item[0] != 'id'){\n                        n.extended_informations[item[0]]= item[1]\n\n                        if (this.settings.extended_data_type[item[0]] == 'cat'){\n\n                            var cs = api.get_color_scale(item[0])\n                            cs.add_value_to_map(item[1])\n\n                        }\n\n                        else if (this.settings.extended_data_type[item[0]] == 'num' && !isNaN(item[1]) ) {\n\n                            item[1] = item[1].toString().indexOf('.') != -1 ? parseFloat(item[1]) : parseInt(item[1])\n\n                            if (this.settings.style.color_extent_max['node'][item[0]] < item[1]) {\n                                this.settings.style.color_extent_max['node'][item[0]] = item[1]\n                            }\n\n                            if (this.settings.style.color_extent_min['node'][item[0]] > item[1]) {\n                                this.settings.style.color_extent_min['node'][item[0]] = item[1]\n                            }\n\n                        }\n                    }\n                })\n\n            }\n        })\n\n        Object.keys(headers).forEach(item => {\n\n            if (item != 'id' || item != 'Length' ) {\n\n\n                if (headers[item] == 'cat'){\n                    api.get_color_scale(item).update()\n\n                }\n            }\n\n        })\n    }\n\n    get_node_by_leafset(lset){\n\n        function setsAreEqual(a, b) {\n            if (a.size !== b.size) {\n                return false;\n            }\n\n            return Array.from(a).every(element => {\n                return b.has(element);\n            });\n        }\n\n        lset = new Set(lset.map(leaf => leaf.toString()))\n\n        var target = false\n\n\n        var check = function(node,children){\n\n            var nl = new Set(node.leaves.map(leaf => leaf.name.replaceAll(\"'\", '').toString()))\n\n            if ( setsAreEqual(nl,lset)){\n                target = node\n            }\n\n        }\n\n        this.traverse(this.data, check, null)\n\n        return target\n    }\n\n};\n\n//# sourceURL=webpack://PhyloIO/./src/model.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Model)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var minhashjs__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! minhashjs */ \"./node_modules/minhashjs/index.js\");\n/* harmony import */ var biojs_io_newick__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! biojs-io-newick */ \"./node_modules/biojs-io-newick/src/index.js\");\n\n\n\n\nvar uid_model = 0\nvar uid_untitle_counter = 0\n;\nconst { parse_nhx } = __webpack_require__(/*! ./utils.js */ \"./src/utils.js\");\nconst { phyloXml } = __webpack_require__(/*! ./phyloxml.js */ \"./src/phyloxml.js\");\n\nclass Model {\n\n    constructor(data, settings, from_raw_data = true) {\n\n        this.zoom;\n        this.settings = {\n            'uid': null,\n            'domain_extended_data' : {},\n            'edge_related_data' : ['Length'],\n            'default_internal_label_is_for_branch': false,\n            'extended_data_type' : {'Topology': 'num'},\n            'labels' : {'leaf' : new Set(), 'node':new Set()},\n            'colorlabels' :{'leaf' : new Set(), 'node':new Set([\"Topology\"])},\n            'display_leaves' : true,\n            'display_nodes_labels' : true,\n            'mirror': false,\n            'name': null,\n            'first_time_render': true,\n            'data_type' : 'newick',\n            'use_branch_lenght' : true,\n            'show_tooltips' : false,\n            'subsample_label' : true,\n            'use_internal_node_name_for_triangles' : true,\n            'display_internal_label' : false,\n            'display_internal_label_left_top' : false,\n            'display_internal_label_left_bottom' : false,\n            'display_leaf_label' : false,\n            'display_leaf_label_left_top' : false,\n            'display_leaf_label_left_bottom' : false,\n            'display_duplication' : false,\n            'has_branch_lenght' : true,\n            'has_duplications' : false,\n            'multiple_search':false,\n            'show_histogram' : false,\n            'align_tip' : false,\n            'use_meta_for_leaf' : true,\n            'use_meta_for_node' : false,\n            'has_histogram_data' : false,\n            'similarity': [],\n            'style': {\n                'font_size_internal' : 14,\n                'color_accessor' : {'leaf' : null, 'node': \"Topology\", 'circle': null},\n                'color_extent_min': {'leaf' : {}, 'node': {\"Topology\":0}, 'circle': {} },\n                'color_extent_max':{'leaf' : {}, 'node': {\"Topology\":1}, 'circle': {}},\n                'number_domain':{ 'Topology': 5, 'Length': 5},\n                'color_domain':{'Topology' : ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC'], 'Length': ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC']},\n                'color_domain_default': ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC'],\n        },\n            'tree': {\n                'node_vertical_size' : 30,\n                'node_horizontal_size' : 40,\n                'node_radius' : 6, // move to style\n                'line_width' : 3,// move to style\n                'font_size':14, // move to style\n                'max_depth' : 0,\n            },\n            'collapse_level': 0,\n            'stack' : {\n                'type': 'genes',//'events',\n                'showHistogramValues' : false,\n                'showHistogramSummaryValue' : true,\n                'legendTxtSize' : 12,\n                'margin' : 8,\n                'xInitialRightMargin' : 45,\n                'stackHeight' : 120,\n                'stackWidth' : 30,\n                'maxStackHeight': 'max', // ratio -> stack height fixed | max -> largest data = stack height\n                'has_support' : false,\n                'only_support' : false,\n\n            },\n            'sync_coloring': false,\n            'selected_triangle_coloring': 'None',\n            'selected_collapse_uncolored': 'Leaves',\n            'selected_collapse_monocolored': 'Leaves',\n            'colorScale': {'leaf' : null, 'node':null, 'circle': {}},\n            'intercolor': {'leaf' : null, 'node': null, 'circle': {}}\n        }\n\n        if (settings) {\n\n            for(var key in settings) {\n\n                if (key == 'labels_array_leaf'){\n                    var value = settings[key];\n                    this.settings['labels']['leaf'] = new Set(value);\n                }\n                if (key == 'labels_array_node'){\n                    var value = settings[key];\n                    this.settings['labels']['node'] = new Set(value);\n                }\n                if (key == 'colorlabels_array_leaf'){\n                    var value = settings[key];\n                    this.settings['colorlabels']['leaf'] = new Set(value);\n                }\n\n                if (key == 'colorlabels_array_node'){\n                    var value = settings[key];\n                    this.settings['colorlabels']['node'] = new Set(value);\n                }\n\n                else{\n                    var value = settings[key];\n                    this.settings[key] = value;\n                }\n\n\n            }\n\n        }\n\n        this.settings.name = this.settings.name ? this.settings.name : \"Untitled \" + uid_untitle_counter++\n\n        this.uid = null\n        this.input_data = data;\n        this.leaves = []\n\n\n\n        if (from_raw_data){\n            this.uid = uid_model++;\n            this.settings.uid = this.uid;\n            this.data = this.factory(this.parse());\n        }\n        else{\n            this.uid = settings.uid;\n            this.settings.uid = this.uid;\n            this.data = data\n            data.leaves = this.get_leaves(data)\n            this.traverse(data, function(n,c){\n                n.leaves = this.get_leaves(n)\n            })\n            this.set_color_scale('node');\n            this.set_color_scale('leaf');\n        }\n\n        this.data.root = true;\n        this.data.elementS = {}\n        this.data.elementBCN = {}\n        this.rooted = this.data.children.length !== 3\n        this.big_tree = (this.leaves.length > 500)\n\n        // check that histogram data is present and compute\n        if(this.settings.show_histogram && this.data.evolutionaryEvents) {\n            this.settings.has_histogram_data  = true;\n            this.largestGenome =  0;\n            this.largestEvents = 0; // todo\n\n            this.traverse(this.data , function(n,c){\n\n                let g = n.nr_hogs ? n.nr_hogs : n.nr_proteins\n                if (g > this.largestGenome ) {this.largestGenome = g;}\n\n                if (n.evolutionaryEvents){\n\n                    var ga = n.evolutionaryEvents.gained ? n.evolutionaryEvents.gained : 0\n                    var l = n.evolutionaryEvents.lost ? n.evolutionaryEvents.lost : 0\n                    var d = n.evolutionaryEvents.duplications ? n.evolutionaryEvents.duplications : 0\n\n                    let e = ga + l + d\n\n\n                    if (e > this.largestEvents ) {this.largestEvents = e;}\n\n                }\n\n                if (this.settings.stack.has_support){\n\n                    let g_support = n.nr_hogs_support ? n.nr_hogs_support : n.nr_proteins_support\n                    if (g_support > this.largestGenome_support ) {this.largestGenome_support = g_support;}\n\n                    if (n.evolutionaryEvents_support){\n\n\n                        var ga_support = n.evolutionaryEvents_support.gained ? n.evolutionaryEvents_support.gained : 0\n                        var l_support = n.evolutionaryEvents_support.lost ? n.evolutionaryEvents_support.lost : 0\n                        var d_support = n.evolutionaryEvents_support.duplications ? n.evolutionaryEvents_support.duplications : 0\n\n                        let e_support = ga_support + l_support + d_support\n\n                        if (e_support > this.largestEvents_support ) {this.largestEvents_support = e_support;}\n\n                    }\n                }\n\n\n\n            })\n\n\n        }\n\n    }\n\n    set_all_color_scale(){\n        this.set_color_scale('node');\n        this.set_color_scale('leaf');\n        this.set_color_scale('circle');\n    }\n\n    remove_all_color_scale(){\n        this.settings.colorScale ={'leaf' : null, 'node':null, 'circle': {}}\n        this.settings.intercolor ={'leaf' : null, 'node':null, 'circle': {}}\n    }\n\n\n\n    get_name(){\n        return this.settings.name\n    }\n\n    set_name(name){\n        this.settings.name = name\n    }\n\n    traverse(o,func_pre, func_post) {\n\n        if (func_pre){\n            func_pre.apply(this,[o,o[\"children\"]])\n        }\n\n        if(o[\"children\"]){\n\n            for (var c in o[\"children\"] ) {\n\n                var child = o[\"children\"][c]\n\n                child = this.traverse(child, func_pre, func_post)\n\n                if (func_post) {\n                    func_post.apply(this,[child,o])\n                }\n\n\n            }\n\n\n        }\n\n        return o\n\n    }\n\n    set_color_scale(type, api){\n\n\n        var type = (typeof type !== 'undefined') ? type : 'node';\n        var api = (typeof type !== 'undefined') ? api : null;\n\n\n        var colorScaleDomain = false;\n        var colorScaleRange;\n        var number;\n\n\n        if (typeof this != \"undefined\" && this) {\n\n\n            // If categorical do special\n            var acc = this.settings.style.color_accessor[type]\n            var type_acc = this.settings.extended_data_type[acc]\n\n\n            if (acc === null){\n                this.settings.colorScale[type] = null\n                return\n            }\n\n\n            if (type_acc == 'cat'){\n\n                this.settings.colorScale[type] = api.get_color_scale(acc)\n\n\n                //var dom = this.settings.domain_extended_data[acc]\n                //this.settings.colorScale[type] = d3.scaleOrdinal().domain(dom).range(d3.schemePaired);\n                return\n            }\n\n            else if (type_acc == 'color'){\n\n                this.settings.colorScale[type] = null\n                return\n            }\n\n\n\n            number = this.settings.style.number_domain[acc]\n\n\n            if (this.settings.style.color_accessor[type] != null && this.settings.style.color_accessor[type] != 'Topology' ) {\n\n                var ms = this.settings.style;\n\n                var ca = ms.color_accessor[type];\n\n                if (ms.color_extent_max[type][ca] == ms.color_extent_min[type][ca]){\n                    this.settings.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate( ms.color_extent_max[type][ca], ms.color_extent_max[type][ca]-1)\n                }else{\n                    this.settings.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate( ms.color_extent_max[type][ca], ms.color_extent_min[type][ca])\n                }\n\n\n                colorScaleRange = this.settings.style.color_domain[acc];\n\n            }\n\n            else {\n                this.settings.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate(1,0)\n                colorScaleRange = this.settings.style.color_domain[acc];\n            }\n\n\n\n        }\n        else {\n\n            number = 5;\n            colorScaleRange = ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC']\n            this.settings.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate(1, 0);\n        }\n\n\n        switch (number) {\n            case 2:\n                colorScaleDomain = [this.settings.intercolor[type](0),this.settings.intercolor[type](1)]\n                break;\n            case 3:\n                colorScaleDomain = [this.settings.intercolor[type](0),this.settings.intercolor[type](0.5) , this.settings.intercolor[type](1)]\n                break;\n            case 4:\n                colorScaleDomain = [this.settings.intercolor[type](0),this.settings.intercolor[type](0.33),this.settings.intercolor[type](0.66) , this.settings.intercolor[type](1)]\n                break;\n            case 5:\n                colorScaleDomain = [this.settings.intercolor[type](0),this.settings.intercolor[type](0.25) ,this.settings.intercolor[type](0.5) ,this.settings.intercolor[type](0.75) , this.settings.intercolor[type](1)]\n\n        }\n\n\n        this.settings.colorScale[type] = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear()\n            .domain(colorScaleDomain)\n            .range(colorScaleRange);\n\n\n\n    }\n\n    traverse_hierarchy(o,func_pre, func_post) {\n\n        var children = o[\"children\"] ? o[\"children\"] : o[\"_children\"]\n\n        if (func_pre){\n            func_pre.apply(this,[o,children])\n        }\n\n        if(children ){\n\n            for (var c in children) {\n\n                var child = children[c]\n\n                child = this.traverse_hierarchy(child, func_pre, func_post)\n\n                if (func_post) {\n                    func_post.apply(this,[child,o])\n                }\n\n\n            }\n\n\n        }\n\n        return o\n\n    }\n\n    set_parent(node,parent){\n        node.parent = parent\n    }\n\n    set_cumulated_length(node, children){\n        if (node.parent) {\n            node.depth = node.parent.depth + 1\n            node.distance_to_root = node.parent.distance_to_root + node.branch_length\n        }\n        else{\n            node.distance_to_root = 0\n        node.depth = 0}\n\n    }\n\n    factory(json){ // todo do one traversal with all in one function\n\n        var p;\n\n        //has_branch_lenght\n        this.settings.has_branch_lenght = false;\n\n        json.children.forEach((child) => {\n            if (typeof child.branch_length != 'undefined') { this.settings.has_branch_lenght = true; }\n        })\n\n        if (this.settings.has_branch_lenght) {\n            this.settings.labels['node'].add('Length')\n            this.settings.labels['leaf'].add('Length')\n            this.settings.colorlabels['node'].add('Length')\n            this.settings.colorlabels['leaf'].add('Length')\n            this.settings.extended_data_type['Length'] = 'num'\n\n            this.settings.style.color_extent_max['node']['Length'] = 0;\n            this.settings.style.color_extent_min['node']['Length'] = 1000000000;\n\n            this.settings.style.color_extent_max['leaf']['Length'] = 0;\n            this.settings.style.color_extent_min['leaf']['Length'] = 1000000000;\n        }\n\n\n        // if branch size is not used put 1\n        if (!this.settings.has_branch_lenght) {\n            p = this.traverse(json, function(n,c){n.branch_length=1})\n            p.branch_length = 0 // root\n        }\n        else{ // sanity check\n            p = this.traverse(json, function(n,c){if (typeof n.branch_length == 'undefined') {n.branch_length=1} })\n            if (typeof p.branch_length == 'undefined') {p.branch_length=1}\n        }\n\n        // set parent attribute\n        p = this.traverse(json, null , this.set_parent)\n\n        // compute cumulated  lenght\n        p = this.traverse(p, this.set_cumulated_length , null)\n\n        this.traverse(p, function(n,c){\n\n            n.extended_informations = {}\n            n.elementS = {}\n            n.elementBCN = {}\n            n.force_label_show = null;\n\n            if(n.branch_length){\n                n.extended_informations['Length'] = n.branch_length;\n                if (this.settings.style.color_extent_max['node']['Length'] < n.branch_length){\n                    this.settings.style.color_extent_max['node']['Length'] = n.branch_length\n                    this.settings.style.color_extent_max['leaf']['Length'] = n.branch_length\n                }\n\n                if (this.settings.style.color_extent_min['node']['Length'] > n.branch_length){\n                    this.settings.style.color_extent_min['node']['Length'] = n.branch_length\n                    this.settings.style.color_extent_min['leaf']['Length'] = n.branch_length\n                }\n            }\n\n            if (typeof c !== 'undefined' && typeof n.name !== 'undefined' && n.name !== \"\" ) {\n                n.extended_informations['Data'] = n.name;\n                this.settings.labels['node'].add('Data')\n                this.settings.labels['leaf'].add('Data')\n                this.settings.extended_data_type['Data'] = 'num'\n\n                if (!isNaN(n.name)){\n\n                    if (!this.settings.colorlabels['node'].has('Data')){\n                        this.settings.colorlabels['node'].add('Data');\n                        this.settings.style.color_extent_max['node']['Data'] = 0;\n                        this.settings.style.color_extent_min['node']['Data'] = 1000000000;\n                    }\n\n                    if (this.settings.style.color_extent_max['node']['Data'] <n.name){\n                        this.settings.style.color_extent_max['node']['Data'] = n.name\n                    }\n\n                    if (this.settings.style.color_extent_min['node']['Data'] > n.name){\n                        this.settings.style.color_extent_min['node']['Data'] = n.name\n                    }\n\n                }\n\n                else {this.settings.extended_data_type['Data'] = 'cat'}\n            }\n\n            if(n.data_nhx && Object.keys(n.data_nhx).length > 0){\n\n                Object.entries(n.data_nhx).forEach(([key, value]) => {\n\n                    this.settings.labels['node'].add(key)\n                    this.settings.labels['leaf'].add(key)\n\n                    this.settings.colorlabels['node'].add(key)\n                    this.settings.colorlabels['leaf'].add(key)\n\n\n                    switch(key){\n                        case 'Ev':\n                            if (value == 'duplication') {\n                                n.duplication = true\n                                this.settings.has_duplications = true;\n                            }\n                            n.extended_informations.events = value\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type['Ev'] = 'cat'\n                            break;\n                        case 'DD':\n                        case 'D':\n                            if (value == 'Y') {\n                                n.duplication = true\n                                this.settings.has_duplications = true;\n\n                            }\n                            else if (value == 'N'){\n                                n.duplication = false\n                                this.settings.has_duplications = true;\n                            }\n                            n.extended_informations.events = value\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type['D'] = 'cat'\n                            break;\n                        case 'XB':\n                        case 'B':\n                            this.settings.edge_related_data.push(key)\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type[key] = 'num'\n                        default:\n                            n.extended_informations[key] = value\n                            this.settings.extended_data_type[key] = 'cat'\n                            break;\n                    }\n                });\n\n\n            }\n            // phyloxml specific attributes\n            for (let attr of [\"taxonomies\", \"sequences\"]) {\n                if (n.hasOwnProperty(attr)) {\n                    Object.entries(n[attr][0]).forEach(([key, value]) => {\n                        n.extended_informations[attr + \"_\" + key] = value;\n                        this.settings.extended_data_type[attr + \"_\" + key] = \"cat\";\n                    });\n                    if (n.name === undefined || n.name === \"\") {\n                        if (attr === \"taxonomies\" && n.taxonomies[0].hasOwnProperty(\"scientific_name\")) {\n                            n.name = n.taxonomies[0].scientific_name;\n                        } else if (attr === \"sequences\" && n.sequence.hasOwnProperty(\"name\")) {\n                            n.name = n.sequences[0].name;\n                        }\n                    }\n                }\n            }\n            if (n.hasOwnProperty(\"date\")){\n                n.extended_informations['date'] = n.date;\n                this.settings.extended_data_type['date'] = \"cat\";\n            }\n\n            if (n.depth > this.settings.tree.max_depth){\n                this.settings.tree.max_depth = n.depth\n            }\n            if (!(n.hasOwnProperty('children'))){\n                this.leaves.push(n)\n                n.correspondingLeaf = {}\n\n            }\n\n            n.leaves = this.get_leaves(n)\n\n        })\n\n        // check the type of all extended data\n        this.traverse(p, function(n,c){\n\n            for (var key in n.extended_informations){\n                if (n.extended_informations.hasOwnProperty(key)) {\n\n                    if (this.settings.extended_data_type[key] === 'num'){\n                        continue\n                    }\n\n                    if (!isNaN(n.extended_informations[key])){\n                        this.settings.extended_data_type[key] = 'num'\n                    }\n\n                }\n            }\n\n        })\n\n\n        this.settings.colorlabels['node'].forEach( (value) => {\n            if (this.settings.extended_data_type[value] === 'num' && value !== 'Topology' ) {\n                this.settings.style.color_extent_max['node'][value] = 0\n                this.settings.style.color_extent_min['node'][value] = 1000000000\n            }\n        });\n\n        this.settings.colorlabels['leaf'].forEach( (value) => {\n            if (this.settings.extended_data_type[value] === 'num' ) {\n                this.settings.style.color_extent_max['leaf'][value] = 0\n                this.settings.style.color_extent_min['leaf'][value] = 1000000000\n            }\n        });\n\n\n        this.traverse(p, function(n,c) {\n            for (var key in n.extended_informations) {\n\n                if (n.extended_informations.hasOwnProperty(key)) {\n\n\n\n                    if (this.settings.extended_data_type[key] === 'num') {\n\n                        // check if min and max are set for node and leaf\n\n                        var val = n.extended_informations[key].toString().indexOf('.') != -1 ? parseFloat(n.extended_informations[key]) : parseInt(n.extended_informations[key])\n\n                        if (this.settings.style.color_extent_max['node'][key] < val) {\n                            this.settings.style.color_extent_max['node'][key] = val\n\n                        }\n\n                        if (this.settings.style.color_extent_min['node'][key] > val) {\n                            this.settings.style.color_extent_min['node'][key] = val\n                        }\n\n                        if (this.settings.style.color_extent_max['leaf'][key] < val) {\n                            this.settings.style.color_extent_max['leaf'][key] = val\n                        }\n\n                        if (this.settings.style.color_extent_min['leaf'][key] > val) {\n                            this.settings.style.color_extent_min['leaf'][key] = val\n                        }\n\n                    }\n\n                }\n            }\n\n        })\n\n\n\n        this.settings.suggestions = [] // autocomplete name\n        this.traverse(json, function(n,c){\n\n            if (n.name !== ''){this.settings.suggestions.push(n.name)}}) //todo add id also and ncBI and more + check empty cfucntion\n\n        return p\n    }\n\n    build_hierarchy_mockup(){\n        return d3__WEBPACK_IMPORTED_MODULE_0__.hierarchy(this.data, d => d.children );\n    }\n\n    parse(){\n\n        if (this.settings.data_type === \"newick\") {\n            return biojs_io_newick__WEBPACK_IMPORTED_MODULE_2__.parse_newick(this.input_data);\n        }\n\n        else if (this.settings.data_type === \"nhx\") {\n            return parse_nhx(this.input_data);\n        }\n\n        else if (this.settings.data_type === \"json\") {\n            return this.input_data\n        }\n        else if (this.settings.data_type === \"phyloxml\") {\n            let phylogenies = phyloXml.parse(this.input_data);\n            if (phylogenies === undefined || phylogenies.length === 0){\n                console.error(\"No phylogenies found\");\n                return {};\n            } else if (phylogenies.length > 1) {\n                console.log(\"dataset contains more than one phylogenies: \"+phylogenies.length + \" Will only use the first one\");\n            }\n            return phylogenies[0].children[0];  // return toplevel clade which is returned as children[0].\n        }\n    }\n\n    collapse(data, action){\n        if (!data.children){return}\n        if (action) {data.collapse = true}\n        else if (action == false){data.collapse = false}\n        else{data.collapse ? data.collapse = false : data.collapse = true;}\n\n    }\n\n    toggle_show_label(data){\n        data.force_label_show ||  data.force_label_show == null ? data.force_label_show = false : data.force_label_show = true;\n    }\n\n    collapseAll(data, action){\n        if (action) {\n            this.traverse(data, (n,c) => {\n                this.collapse(n, true)\n                //n.collapse = true\n            } , null)}\n        else if (action == false){\n            this.traverse(data, (n,c) => {\n                this.collapse(n, false)\n                //n.collapse = false\n            } , null)}\n\n\n    }\n\n    get_all_collapse(data){\n\n        var collapsed = []\n\n        this.traverse(data, (n,c) => {if (n.collapse){\n                collapsed.push(n)\n            }}, null)\n\n        return collapsed\n\n    }\n\n    apply_collapse_to_list(collapsed){\n        this.traverse(this.data, (n,c) => {\n            if (collapsed.includes(n)){\n                this.collapse(n, true)\n            }\n            else{\n                this.collapse(n, false)\n            }\n        } , null)\n    }\n\n    swap_subtrees(data){\n         var e = data.children.pop()\n        data.children.unshift(e)\n        data.leaves = this.get_leaves(data)\n    }\n\n    unswap_subtrees(data){\n        var e = data.children.shift()\n        data.children.push(e)\n        data.leaves = this.get_leaves(data)\n\n    }\n\n    reroot(data){\n\n        // extract meta data (zoom)\n        var meta = this.zoom;\n\n        // create new root r\n\n        var root = {\"children\": [], \"name\": \"\", \"branch_length\": 0, \"extended_informations\": {}}\n\n\n        for (var key in data.extended_informations) {\n\n            if (this.settings.edge_related_data.includes(key)) {\n                root.extended_informations[key] =  data.extended_informations[key]\n            }\n\n            else{\n                root.extended_informations[key] =  null\n            }\n\n        }\n\n        // source and target node of the clicked edges\n        var parent = data.parent\n        var child = data\n\n        // insert new root node between target and source and connect\n        root.children.push(child)\n        parent.children.push(root)\n        this.set_parent(child, root )\n        this.set_parent(root, parent )\n        const index = parent.children.indexOf(child);\n        if (index > -1) {\n            parent.children.splice(index, 1);\n        }\n\n        // ajust distance now that distance target/source is splitted in two\n        var old_distance = child.branch_length\n\n        child.branch_length = old_distance/2\n        child.extended_informations['Length'] = old_distance/2\n\n        parent.branch_length_before_reverse = parent.branch_length\n        parent.branch_length = old_distance /2\n        parent.extended_informations['Length'] = old_distance/2\n\n        // Until we reach the old root reverse child/parent order\n        var child = root\n        var stack = []\n\n        while (parent.root != true) {\n\n            stack.push([parent,child])\n\n            child = parent\n            parent = parent.parent\n\n            parent.values_before_reverse = {}\n            parent.branch_length_before_reverse = parent.branch_length\n\n            for (var value of this.settings.edge_related_data) {\n\n                parent.values_before_reverse[value] = parent.extended_informations[value]\n\n                if (value=== 'Length'){\n                    parent.branch_length = child.branch_length_before_reverse || child.branch_length;\n                    parent.extended_informations['Length'] = parent.branch_length;\n\n                }\n                else{\n                    if ( child.values_before_reverse && value in child.values_before_reverse){\n                        parent.extended_informations[value] = child.values_before_reverse[value]\n                    }\n                    else{\n                        parent.extended_informations[value] = child.extended_informations[value]\n                        child.extended_informations[value] = null\n                    }\n\n                }\n\n\n\n            }\n\n\n        }\n        stack.push([parent,child])\n        for (var e in stack){\n            var p = stack[e][0]\n            var c = stack[e][1]\n\n            this.reverse_order(p,c)\n\n        }\n\n        // Remove old root\n\n        var old_root = parent\n        var leading_branch = parent.parent\n\n\n\n        if (old_root.children.length == 1){\n\n            const ce = leading_branch.children.indexOf(old_root);\n            if (ce > -1) {\n                leading_branch.children.splice(ce, 1);\n            }\n\n            var i = 0,len = old_root.children.length;\n            while (i < len) {\n                let c = old_root.children[i]\n                c.parent = leading_branch\n                leading_branch.children.push(c)\n                i++\n            }\n\n            old_root = null\n\n\n\n        }\n\n        // For multifurcation we need to keep the root\n        else {\n            old_root.root = false\n            old_root.branch_length = leading_branch.branch_length\n            parent.extended_informations['Length'] = leading_branch.branch_length\n        }\n\n\n        for (var key of this.settings.edge_related_data) {\n\n            for (var childy of root.children) {\n\n                childy.extended_informations[key] =  root.extended_informations[key]\n\n            }\n\n            root.extended_informations[key] =  null\n        }\n\n\n        // configure new root\n        root.zoom = meta\n        this.data = root;\n        this.data.root = true;\n\n        root.leaves = this.get_leaves(root)\n\n\n        this.traverse(root, function(n,c){\n            n.leaves = this.get_leaves(n)\n            n.values_before_reverse = {}\n            n.branch_length_before_reverse = undefined\n        })\n\n\n\n    }\n\n    trim(branch){\n\n        // source and target node of the clicked edges\n        var parent = branch.parent\n        var child = branch\n\n        var untrim_data = {\n            \"parent\" : null,\n            \"floating\" : null,\n            \"untrim_data\" : null,\n            \"index\": null,\n            \"root_mode\": false,\n        }\n\n\n        if (parent.children.length > 2) {\n            untrim_data.index = this.detach_child(parent,child)\n\n            untrim_data.parent = parent;\n            untrim_data.floating = false;\n            untrim_data.child =  child;\n\n            return untrim_data;\n        }\n\n        else{\n\n            if (typeof parent.parent == 'undefined'){ // parent is root\n                untrim_data.root_mode = true;\n\n                var sibling = parent.children[0] == child ? parent.children[1] : parent.children[0]\n                untrim_data.index = this.detach_child(parent, sibling)\n\n                this.data = sibling;\n\n                untrim_data.parent = null;\n                untrim_data.floating = parent;\n                untrim_data.child =  sibling;\n\n                return untrim_data;\n\n            }\n\n            else{\n\n                this.detach_child(parent.parent, parent)\n                var sibling = parent.children[0] == child ? parent.children[1] : parent.children[0]\n                untrim_data.index = this.detach_child(parent, sibling)\n                this.attach_child(parent.parent, sibling)\n\n                untrim_data.parent = parent.parent;\n                untrim_data.floating = parent;\n                untrim_data.child =  sibling;\n\n                return untrim_data;\n\n            }\n\n\n        }\n\n    }\n\n    untrim(parent, floating, child, index, root_mode){\n\n        if (floating != false){\n            if (root_mode){\n                this.data = floating\n                this.attach_child(floating,child, index)\n\n            }else{\n                this.detach_child(parent,child)\n                this.attach_child(parent,floating)\n                this.attach_child(floating,child, index)\n            }\n\n        }\n        else {\n            this.attach_child(parent,child, index)\n        }\n    }\n\n    detach_child(parent, child){\n        var index = parent.children.indexOf(child);\n        if (index > -1) {\n            parent.children.splice(index, 1);\n        }\n        return index\n    }\n\n    attach_child(parent,child_to_adopt, index){\n\n        if (typeof index !== 'undefined') {\n            parent.children.splice( index, 0, child_to_adopt );\n            child_to_adopt.parent = parent;\n\n        } else {\n            parent.children.push(child_to_adopt);\n            child_to_adopt.parent = parent;\n        }\n\n\n    }\n\n    interleave_node(parent, to_insert,child){\n        this.detach_child(parent, child)\n        this.attach_child(parent,to_insert)\n        this.attach_child(to_insert, child)\n    }\n\n    store_zoomTransform(zoom){\n\n        this.zoom = {\n            \"k\":zoom.k,\n            \"x\":zoom.x,\n            \"y\":zoom.y,\n        };\n    }\n\n    /**\n     Description:\n     Creates list of leaves of each node in subtree rooted at v\n\n     Note:\n     Difference between deep leaf list and leaves in:\n     (A:0.1,B:0.2,(C:0.3,D:0.4):0.5);\n     - Root has leaves: A, B, C and D (terminal leaves)\n     - Root has deep leaves: A, B, C, D and CD (terminal leaves + intermediate leaves)\n     */\n    createDeepLeafList(filter) {\n\n        function is_leaf(str) {\n            return !str.includes(\"|__|\");\n        }\n\n         var build_deepLeafList = function(child, node){\n\n             if ( child.hasOwnProperty('children') ){\n                 var dp = child.deepLeafList.filter(is_leaf).sort()\n                 if (!dp.every((e) => e === '')){\n                     child.deepLeafList.push(dp.join('|__|'));\n                 }\n\n             }\n\n             node.deepLeafList = node.deepLeafList.concat(child.deepLeafList)\n        }\n\n        var build_deepLeafLeaves = function(node,children){\n\n             if (!(node.hasOwnProperty('children') )){\n\n                 if (typeof filter != 'undefined') {\n                     if (filter.includes(node.name)){\n                         node.deepLeafList = [node.name]\n                     }\n                     else{\n                         node.deepLeafList = []\n                     }\n\n                 }\n                 else{\n                     node.deepLeafList = [node.name]\n                 }\n\n             }\n             else {\n                 node.deepLeafList = []\n             }\n\n\n        }\n\n        this.traverse(this.data, build_deepLeafLeaves, build_deepLeafList)\n\n    }\n\n    createMinHash(){\n\n        var assign_hash = function(node,children){\n\n            node.min_hash = new minhashjs__WEBPACK_IMPORTED_MODULE_1__.MinHash.MinHash()\n            node.deepLeafList.map(function(w) { node.min_hash.update(w) });\n        }\n\n        this.traverse(this.data, assign_hash, null)\n    }\n\n    removeMinHash(){\n\n        var remove_hash = function(node,children){\n\n            node.min_hash = null\n        }\n\n        this.traverse(this.data, remove_hash, null)\n\n    }\n\n    reverse_order(parent,child) {\n\n        child.children.push(parent)\n        parent.parent =child\n\n        const b = parent.children.indexOf(child);\n        if (b > -1) {\n            parent.children.splice(b, 1);\n        }\n\n    }\n\n    get_leaves(node){\n\n\n        var l = []\n\n        this.traverse(node, function(n,c){\n            if (!(n.hasOwnProperty('children'))){\n                l.push(n)\n            }\n\n\n    })\n        return l\n    }\n\n    remove_circularity(){ // safe my model\n        var data = Object.assign({}, this.data);\n\n        this.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n            n.correspondingLeaf = {}\n            n.elementBCN = null})\n\n        return data\n    }\n\n    remove_circularity_only_parent_and_leaves(){ // safe my model\n        var data = Object.assign({}, this.data);\n\n        this.traverse(data, function(n,c){\n            n.parent=null;\n            n.leaves=null;\n        })\n\n        return data\n    }\n\n    add_circularity_back(){\n\n        this.data.leaves = this.get_leaves(this.data)\n\n        this.traverse(this.data, function(n,c){n.leaves = this.get_leaves(n)}, this.set_parent)\n\n\n    }\n\n    add_meta_leaves(meta, headers, api, reference){\n\n        // headers: column_name -> type\n\n        Object.keys(headers).forEach(item => {\n\n\n            if (item != reference || item != 'Length' ) {\n\n                this.settings.extended_data_type[item] = headers[item]\n                this.settings.domain_extended_data[item] = []\n                this.settings.labels['leaf'].add(item)\n                this.settings.colorlabels['leaf'].add(item)\n\n                if (headers[item] == 'num'){\n                    this.settings.style.color_extent_max['leaf'][item] = 0\n                    this.settings.style.color_extent_min['leaf'][item] = 100000\n                }\n            }\n\n        })\n\n            this.get_leaves(this.data).forEach(d => {\n            if (d.name in meta){\n\n                Object.entries(meta[d.name]).forEach(item => {\n                    if (item[0] != reference){\n\n                        d.extended_informations[item[0]]= item[1]\n\n                        if (this.settings.extended_data_type[item[0]] == 'num' && !isNaN(item[1])) {\n\n                            item[1] = item[1].toString().indexOf('.') != -1 ? parseFloat(item[1]) : parseInt(item[1])\n\n                            if (this.settings.style.color_extent_max['leaf'][item[0]] < item[1]) {\n                                this.settings.style.color_extent_max['leaf'][item[0]] = item[1]\n                            }\n\n                            if (this.settings.style.color_extent_min['leaf'][item[0]] > item[1]) {\n                                this.settings.style.color_extent_min['leaf'][item[0]] = item[1]\n                            }\n\n                        }\n\n                        if (this.settings.extended_data_type[item[0]] == 'cat'){\n\n                            var cs = api.get_color_scale(item[0])\n                            cs.add_value_to_map(item[1])\n\n                            this.settings.domain_extended_data[item[0]].push(item[1])\n                        }\n\n                    }\n\n                })\n\n            }\n\n        })\n\n\n        Object.keys(headers).forEach(item => {\n            if (item != reference || item != 'Length' ) {\n\n\n                if (headers[item] == 'cat'){\n                    api.get_color_scale(item).update()\n\n                }\n            }\n\n        })\n\n\n\n    }\n\n    add_meta_nodes(meta, headers, api, reference){\n\n\n        Object.keys(headers).forEach(item => {\n            if (item != reference|| item != 'Length' ) {\n                this.settings.extended_data_type[item] = headers[item]\n                this.settings.domain_extended_data[item] = []\n                this.settings.labels['node'].add(item)\n                this.settings.colorlabels['node'].add(item)\n\n                if (headers[item] == 'num'){\n                    this.settings.style.color_extent_max['node'][item] = 0\n                    this.settings.style.color_extent_min['node'][item] = 100000\n                }\n            }\n\n        })\n\n        this.traverse(this.data, function(n,c){\n\n            var name_value = n.name in meta ? n.name : n.extended_informations['Data'] in meta ? n.extended_informations['Data'] : false\n\n            if (name_value){\n\n                Object.entries(meta[name_value]).forEach(item => {\n\n                    if (item[0] != reference){\n                        n.extended_informations[item[0]]= item[1]\n\n                        if (this.settings.extended_data_type[item[0]] == 'cat'){\n\n                            var cs = api.get_color_scale(item[0])\n                            cs.add_value_to_map(item[1])\n\n                        }\n\n                        else if (this.settings.extended_data_type[item[0]] == 'num' && !isNaN(item[1]) ) {\n\n                            item[1] = item[1].toString().indexOf('.') != -1 ? parseFloat(item[1]) : parseInt(item[1])\n\n                            if (this.settings.style.color_extent_max['node'][item[0]] < item[1]) {\n                                this.settings.style.color_extent_max['node'][item[0]] = item[1]\n                            }\n\n                            if (this.settings.style.color_extent_min['node'][item[0]] > item[1]) {\n                                this.settings.style.color_extent_min['node'][item[0]] = item[1]\n                            }\n\n                        }\n                    }\n                })\n\n            }\n        })\n\n        Object.keys(headers).forEach(item => {\n\n            if (item != reference || item != 'Length' ) {\n\n\n                if (headers[item] == 'cat'){\n                    api.get_color_scale(item).update()\n\n                }\n            }\n\n        })\n    }\n\n    get_node_by_leafset(lset){\n\n        function setsAreEqual(a, b) {\n            if (a.size !== b.size) {\n                return false;\n            }\n\n            return Array.from(a).every(element => {\n                return b.has(element);\n            });\n        }\n\n        lset = new Set(lset.map(leaf => leaf.toString()))\n\n        var target = false\n\n\n        var check = function(node,children){\n\n            var nl = new Set(node.leaves.map(leaf => leaf.name.replaceAll(\"'\", '').toString()))\n\n            if ( setsAreEqual(nl,lset)){\n                target = node\n            }\n\n        }\n\n        this.traverse(this.data, check, null)\n\n        return target\n    }\n\n};\n\n//# sourceURL=webpack://PhyloIO/./src/model.js?");
+
+/***/ }),
+
+/***/ "./src/phyloxml.js":
+/*!*************************!*\
+  !*** ./src/phyloxml.js ***!
+  \*************************/
+/***/ ((module, __unused_webpack_exports, __webpack_require__) => {
+
+eval("/**\n *  Copyright (C) 2019 Christian M. Zmasek\n *  Copyright (C) 2019 J. Craig Venter Institute\n *  All rights reserved\n *\n *  This library is free software; you can redistribute it and/or\n *  modify it under the terms of the GNU Lesser General Public\n *  License as published by the Free Software Foundation; either\n *  version 2.1 of the License, or (at your option) any later version.\n *\n *  This library is distributed in the hope that it will be useful,\n *  but WITHOUT ANY WARRANTY; without even the implied warranty of\n *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU\n *  Lesser General Public License for more details.\n *\n *  You should have received a copy of the GNU Lesser General Public\n *  License along with this library; if not, write to the Free Software\n *  Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\n *\n *  Created by czmasek on 7/7/2016.\n */\n\n// v 1.0.0\n// 2019-05-16\n//\n// phyloxml.js is a JavaScript program for reading (SAX style parser)\n// and writing phylogenetic trees in phyloXML format.\n//\n// phyloXML website: http://www.phyloxml.org/\n//\n// Availability:\n//   https://github.com/cmzmasek/phyloxml-js\n//   https://www.npmjs.com/package/phyloxml\n//\n// Dependencies:\n//  sax.js (1.2.4): https://www.npmjs.com/package/sax/v/1.2.4\n//\n//\n// Example:\n// This basic example shows how to parse a phyloXML formatted String into to a\n// object representing a phylogenetic tree. Followed by printing some elements\n// and then converting the object back to a phyloXML formatted String.\n//\n// Change './phyloxml' to 'phyloxml' if you use this code outside of this package\n//\n// var phyloXml = require('./phyloxml').phyloXml;\n//\n// phlyoXmlFormattedString = '<phyloxml xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" ' +\n//     'xmlns=\"http://www.phyloxml.org\" ' +\n//     'xsi:schemaLocation=\"http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd\">' +\n//     '<phylogeny rooted=\"true\" rerootable=\"false\">' +\n//     '<clade><branch_length>0.2</branch_length>' +\n//     '<clade><branch_length>0.4</branch_length><name>A</name></clade>' +\n//     '<clade><branch_length>0.6</branch_length><name>B</name></clade>' +\n//     '</clade>' +\n//     '</phylogeny>' +\n//     '</phyloxml>';\n//\n// var phylogeneticTree = phyloXml.parse(phlyoXmlFormattedString, {trim: true, normalize: true})[0];\n//\n// console.log('Root branch length  : ' + phylogeneticTree.children[0].branch_length);\n// console.log('Node A name         : ' + phylogeneticTree.children[0].children[0].name);\n// console.log('Node A branch length: ' + phylogeneticTree.children[0].children[0].branch_length);\n// console.log('Node B name         : ' + phylogeneticTree.children[0].children[1].name);\n// console.log('Node B branch length: ' + phylogeneticTree.children[0].children[1].branch_length);\n//\n// console.log('Entire tree in phyloXML format:');\n// console.log(phyloXml.toPhyloXML(phylogeneticTree, 4));\n//\n//\n// Synchronous parsing of phyloXML-formatted String:\n//\n// var px = require('./phyloxml').phyloXml;\n// var phys = px.parse(phyloxmlText, {trim: true, normalize: true});\n// console.log(px.toPhyloXML(phys[0], 6));\n//\n//\n// Asynchronous parsing of phyloXML-formatted Stream:\n//\n// var fs = require('fs');\n// var px = require('./phyloxml').phyloXml;\n// var stream = fs.createReadStream(xmlFile, {encoding: 'utf8'});\n// px.parseAsync(stream, {trim: true, normalize: true});\n\n\n(function phyloXml() {\n\n    \"use strict\";\n\n    var sax = null;\n    if ( true && module.exports && !__webpack_require__.g.xmldocAssumeBrowser) {\n        // Being used in a Node-like environment\n        sax = __webpack_require__(/*! sax */ \"./node_modules/sax/lib/sax.js\");\n    }\n    else if (typeof window !== \"undefined\") {\n        // Attached to the Window object in a browser\n        sax = window.sax;\n        if (!sax) {\n            throw new Error(\"Expected sax to be defined. Make sure you are including sax.js before this file.\");\n        }\n    }\n    else {\n        sax = this.sax;\n        if (!sax) {\n            throw new Error(\"Expected sax to be defined. Make sure you are including sax.js before this file.\");\n        }\n    }\n\n    // --------------------------------------------------------------\n    // phyloXML constants\n    // --------------------------------------------------------------\n\n    // Accession\n    var ACCESSION = 'accession';\n    var ACCESSION_SOURCE_ATTR = 'source';\n    var ACCESSION_COMMENT_ATTR = 'comment';\n\n    // Annotation\n    var ANNOTATION = 'annotation';\n    var ANNOTATION_REF_ATTR = 'ref';\n    var ANNOTATION_SOURCE_ATTR = 'source';\n    var ANNOTATION_EVIDENCE_ATTR = 'evidence';\n    var ANNOTATION_TYPE_ATTR = 'type';\n    var ANNOTATION_DESC = 'desc';\n\n    // Clade\n    var CLADE = 'clade';\n    var CLADE_BRANCH_LENGTH = 'branch_length';\n    var CLADE_ID_SOURCE_ATTR = 'id_source';\n    var CLADE_COLLAPSE_ATTR = 'collapse';\n    var CLADE_NAME = 'name';\n    var CLADE_WIDTH = 'width';\n\n    // Clade Relation\n    var CLADE_RELATION = 'clade_relation';\n    var CLADE_RELATION_DISTANCE_ATTR = 'distance';\n    var CLADE_RELATION_ID_REF_0_ATTR = 'id_ref_0';\n    var CLADE_RELATION_ID_REF_1_ATTR = 'id_ref_1';\n    var CLADE_RELATION_TYPE_ATTR = 'type';\n\n    // Sequence Relation\n    var SEQUENCE_RELATION = 'sequence_relation';\n    var SEQUENCE_RELATION_DISTANCE_ATTR = 'distance';\n    var SEQUENCE_RELATION_ID_REF_0_ATTR = 'id_ref_0';\n    var SEQUENCE_RELATION_ID_REF_1_ATTR = 'id_ref_1';\n    var SEQUENCE_RELATION_TYPE_ATTR = 'type';\n\n    // Color\n    var COLOR = 'color';\n    var COLOR_RED = 'red';\n    var COLOR_GREEN = 'green';\n    var COLOR_BLUE = 'blue';\n    var COLOR_ALPHA = 'alpha';\n\n    // Confidence\n    var CONFIDENCE = 'confidence';\n    var CONFIDENCE_TYPE_ATTR = 'type';\n    var CONFIDENCE_STDDEV_ATTR = 'stddev';\n    var CONFIDENCES = 'confidences';\n\n    // Cross References\n    var CROSS_REFERENCES = 'cross_references';\n\n    // Date\n    var DATE = 'date';\n    var DATE_UNIT_ATTR = 'unit';\n    var DATE_DESC = 'desc';\n    var DATE_VALUE = 'value';\n    var DATE_MINIMUM = 'minimum';\n    var DATE_MAXIMUM = 'maximum';\n\n    // Distribution\n    var DISTRIBUTION = 'distribution';\n    var DISTRIBUTION_DESC = 'desc';\n\n    // Domain Architecture\n    var DOMAIN_ARCHITECTURE = 'domain_architecture';\n    var DOMAIN_ARCHITECTURE_LENGTH_ATTR = 'length';\n\n    // Events\n    var EVENTS = 'events';\n    var EVENTS_TYPE = 'type';\n    var EVENTS_DUPLICATIONS = 'duplications';\n    var EVENTS_SPECIATIONS = 'speciations';\n    var EVENTS_LOSSES = 'losses';\n\n    // Id\n    var ID = 'id';\n    var ID_PROVIDER_ATTR = 'provider';\n\n    // Mol Seq\n    var MOLSEQ = 'mol_seq';\n    var MOLSEQ_IS_ALIGNED_ATTR = 'is_aligned';\n\n    // Phylogeny\n    var PHYLOGENY = 'phylogeny';\n\n    // Phyloxml\n    var PHYLOXML = 'phyloxml';\n\n    // Point\n    var POINT = 'point';\n    var POINT_ALT_UNIT_ATTR = 'alt_unit';\n    var POINT_GEODETIC_DATUM_ATTR = 'geodetic_datum';\n    var POINT_LAT = 'lat';\n    var POINT_LONG = 'long';\n    var POINT_ALT = 'alt';\n\n    // Property\n    var PROPERTY = 'property';\n    var PROPERTY_REF_ATTR = 'ref';\n    var PROPERTY_ID_REF_ATTR = 'id_ref';\n    var PROPERTY_UNIT_ATTR = 'unit';\n    var PROPERTY_DATATYPE_ATTR = 'datatype';\n    var PROPERTY_APPLIES_TO_ATTR = 'applies_to';\n    var PROPERTIES = 'properties';\n\n    // Protein Domain\n    var PROTEINDOMAIN = 'domain';\n    var PROTEINDOMAIN_FROM_ATTR = 'from';\n    var PROTEINDOMAIN_TO_ATTR = 'to';\n    var PROTEINDOMAIN_CONFIDENCE_ATTR = 'confidence';\n    var PROTEINDOMAIN_ID_ATTR = 'id';\n\n    // Reference\n    var REFERENCE = 'reference';\n    var REFERENCE_DOI_ATTR = 'doi';\n    var REFERENCE_DESC = 'desc';\n\n    // Sequence\n    var SEQUENCE = 'sequence';\n    var SEQUENCE_ID_SOURCE_ATTR = 'id_source';\n    var SEQUENCE_ID_REF_ATTR = 'id_ref';\n    var SEQUENCE_TYPE_ATTR = 'type';\n    var SEQUENCE_SYMBOL = 'symbol';\n    var SEQUENCE_NAME = 'name';\n    var SEQUENCE_GENE_NAME = 'gene_name';\n    var SEQUENCE_LOCATION = 'location';\n    var SEQUENCES = 'sequences';\n\n    // Taxonomy\n    var TAXONOMY = 'taxonomy';\n    var TAXONOMY_ID_SOURCE_ATTR = 'id_source';\n    var TAXONOMY_CODE = 'code';\n    var TAXONOMY_SCIENTIFIC_NAME = 'scientific_name';\n    var TAXONOMY_AUTHORITY = 'authority';\n    var TAXONOMY_COMMON_NAME = 'common_name';\n    var TAXONOMY_SYNONYM = 'synonym';\n    var TAXONOMY_RANK = 'rank';\n    var TAXONOMIES = 'taxonomies';\n    var TAXONOMY_SYNONYMS = 'synonyms';\n\n    // Uri\n    var URI = 'uri';\n    var URI_TYPE_ATTR = 'type';\n    var URI_DESC_ATTR = 'desc';\n\n    // Phylogeny\n    var PHYLOGENY_ROOTED_ATTR = 'rooted';\n    var PHYLOGENY_REROOTABLE_ATTR = 'rerootable';\n    var PHYLOGENY_BRANCH_LENGTH_UNIT_ATTR = 'branch_length_unit';\n    var PHYLOGENY_TYPE_ATTR = 'type';\n    var PHYLOGENY_NAME = 'name';\n    var PHYLOGENY_DESCRIPTION = 'description';\n    var PHYLOGENY_DATE = 'date';\n\n    // Simple_Characteristics (to be deprecated!)\n    var X_SIMPLE_CHARACTERISTICS = 'Simple_Characteristics';\n    var X_SIMPLE_CHARACTERISTIC_COUNTRY = 'Country';\n    var X_SIMPLE_CHARACTERISTIC_YEAR = 'Year';\n    var X_SIMPLE_CHARACTERISTIC_HOST = 'Host';\n    var X_SIMPLE_CHARACTERISTIC_HA = 'HA';\n    var X_SIMPLE_CHARACTERISTIC_NA = 'NA';\n\n    // appType (special for Virus BRC)\n    var APPTYPE = 'flu_type';\n\n    // Unknown source, id, confidence type:\n    var UNKNOWN = 'unknown';\n\n    // --------------------------------------------------------------\n    // Instance variables\n    // --------------------------------------------------------------\n    var _phylogenies = null;\n    var _phylogeny = null;\n    var _cladeStack = null;\n    var _tagStack = null;\n    var _objectStack = null;\n\n    // --------------------------------------------------------------\n    // Others\n    // --------------------------------------------------------------\n    var PROPERTY_REF_RE = /[a-zA-Z0-9_]+:\\S+/;\n    var PROPERTY_UNIT_RE = /[a-zA-Z0-9_]+:\\S+/;\n    var PROPERTY_DATATYPE_RE = /xsd:\\S+/;\n\n    // --------------------------------------------------------------\n    // Functions for object creation\n    // --------------------------------------------------------------\n    function newAccession(tag) {\n        var parent = _tagStack.get(1);\n        if (!(parent === SEQUENCE || parent === CROSS_REFERENCES)) {\n            throw new PhyloXmlError(\"found accession outside of sequence or cross-references\");\n        }\n        var acc = {};\n        acc.value = null;\n        acc.source = getAttribute(ACCESSION_SOURCE_ATTR, tag.attributes);\n        acc.comment = getAttribute(ACCESSION_COMMENT_ATTR, tag.attributes);\n        if (!acc.source) {\n            acc.source = UNKNOWN;\n        }\n        if (parent === SEQUENCE) {\n            getCurrentObject().accession = acc;\n        }\n        else {\n            addToArrayInCurrentObjectUnnamed(acc);\n        }\n        _objectStack.push(acc);\n    }\n\n    function newAnnotation(tag) {\n        var parent = _tagStack.get(1);\n        if (parent != SEQUENCE) {\n            throw new PhyloXmlError(\"found annotation outside of sequence\");\n        }\n        var ann = {};\n        ann.evidence = getAttribute(ANNOTATION_EVIDENCE_ATTR, tag.attributes);\n        ann.ref = getAttribute(ANNOTATION_REF_ATTR, tag.attributes);\n        ann.source = getAttribute(ANNOTATION_SOURCE_ATTR, tag.attributes);\n        ann.type = getAttribute(ANNOTATION_TYPE_ATTR, tag.attributes);\n        addToArrayInCurrentObject('annotations', ann);\n        _objectStack.push(ann);\n    }\n\n    function newBranchColor() {\n        var parent = _tagStack.get(1);\n        if (parent != CLADE) {\n            throw new PhyloXmlError(\"found branch color outside of clade\");\n        }\n        var col = {};\n        col.red = 0;\n        col.green = 0;\n        col.blue = 0;\n        getCurrentObject().color = col;\n        _objectStack.push(col);\n    }\n\n    function newClade(tag) {\n        var newClade = {};\n        newClade.branch_length = getAttributeAsFloat(CLADE_BRANCH_LENGTH, tag.attributes);\n        newClade.collapse = getAttributeAsBoolean(CLADE_COLLAPSE_ATTR, tag.attributes);\n        if (CLADE_ID_SOURCE_ATTR in tag.attributes) {\n            newClade.id_source = tag.attributes[CLADE_ID_SOURCE_ATTR];\n        }\n        if (_phylogeny === null) {\n            var phylogeny_data = _objectStack.pop();\n            if (!_objectStack.isEmpty()) {\n                throw new PhyloXmlError('severe phyloXML format error');\n            }\n            _phylogeny = phylogeny_data;\n            _phylogeny.children = [newClade];\n        }\n        else {\n            var currClade = getCurrentClade();\n            if (currClade.children === undefined) {\n                currClade.children = [newClade];\n            }\n            else {\n                currClade.children.push(newClade);\n            }\n        }\n        _cladeStack.push(newClade);\n        _objectStack.push(newClade);\n    }\n\n    function newCladeRelation(tag) {\n        var cr = {};\n        cr.distance = getAttributeAsFloat(CLADE_RELATION_DISTANCE_ATTR, tag.attributes);\n        cr.id_ref_0 = getAttribute(CLADE_RELATION_ID_REF_0_ATTR, tag.attributes);\n        cr.id_ref_1 = getAttribute(CLADE_RELATION_ID_REF_1_ATTR, tag.attributes);\n        cr.type = getAttribute(CLADE_RELATION_TYPE_ATTR, tag.attributes);\n        addToArrayInCurrentObject('clade_relations', cr);\n        _objectStack.push(cr);\n    }\n\n    function newSequenceRelation(tag) {\n        var sr = {};\n        sr.distance = getAttributeAsFloat(SEQUENCE_RELATION_DISTANCE_ATTR, tag.attributes);\n        sr.id_ref_0 = getAttribute(SEQUENCE_RELATION_ID_REF_0_ATTR, tag.attributes);\n        sr.id_ref_1 = getAttribute(SEQUENCE_RELATION_ID_REF_1_ATTR, tag.attributes);\n        sr.type = getAttribute(SEQUENCE_RELATION_TYPE_ATTR, tag.attributes);\n        addToArrayInCurrentObject('sequence_relations', sr);\n        _objectStack.push(sr);\n    }\n\n    function newConfidence(tag) {\n        var conf = {};\n        conf.value = null;\n        conf.type = getAttribute(CONFIDENCE_TYPE_ATTR, tag.attributes);\n        conf.stddev = getAttributeAsFloat(CONFIDENCE_STDDEV_ATTR, tag.attributes);\n        var parent = _tagStack.get(1);\n        if (parent === CLADE || parent === PHYLOGENY) {\n            addToArrayInCurrentObject(CONFIDENCES, conf);\n        }\n        else if (parent === ANNOTATION || parent === EVENTS || parent === CLADE_RELATION || parent === SEQUENCE_RELATION) {\n            getCurrentObject().confidence = conf;\n        }\n        _objectStack.push(conf);\n    }\n\n    function newCrossReferences() {\n        var parent = _tagStack.get(1);\n        if (parent != SEQUENCE) {\n            throw new PhyloXmlError(\"found cross-reference outside of sequence\");\n        }\n        var xrefs = [];\n        getCurrentObject().cross_references = xrefs;\n        _objectStack.push(xrefs);\n    }\n\n    function newDate(tag) {\n        var date = {};\n        date.unit = getAttribute(DATE_UNIT_ATTR, tag.attributes);\n        getCurrentObject().date = date;\n        _objectStack.push(date);\n    }\n\n    function newDistribution(tag) {\n        var dist = {};\n        dist.desc = null;\n        dist.unit = getAttribute(DATE_UNIT_ATTR, tag.attributes);\n        addToArrayInCurrentObject('distributions', dist);\n        _objectStack.push(dist);\n    }\n\n    function newDomainArchitecture(tag) {\n        var da = {};\n        da.domains = null;\n        da.length = getAttributeAsInt(DOMAIN_ARCHITECTURE_LENGTH_ATTR, tag.attributes);\n        getCurrentObject().domain_architecture = da;\n        _objectStack.push(da);\n    }\n\n    function newEvents() {\n        var events = {};\n        getCurrentObject().events = events;\n        _objectStack.push(events);\n    }\n\n    function newId(tag) {\n        var i = {};\n        i.value = null;\n        i.provider = getAttribute(ID_PROVIDER_ATTR, tag.attributes);\n        getCurrentObject().id = i;\n        _objectStack.push(i);\n    }\n\n    function newMolecularSequence(tag) {\n        var mol_seq = {};\n        mol_seq.is_aligned = getAttributeAsBoolean(MOLSEQ_IS_ALIGNED_ATTR, tag.attributes);\n        getCurrentObject().mol_seq = mol_seq;\n        _objectStack.push(mol_seq);\n    }\n\n    function newPoint(tag) {\n        var p = {};\n        p.alt_unit = getAttribute(POINT_ALT_UNIT_ATTR, tag.attributes);\n        p.geodetic_datum = getAttribute(POINT_GEODETIC_DATUM_ATTR, tag.attributes);\n        var parent = _tagStack.get(1);\n        if (parent === DISTRIBUTION) {\n            addToArrayInCurrentObject('points', p);\n        }\n        _objectStack.push(p);\n    }\n\n    function newProperty(tag) {\n        var prop = {};\n        prop.ref = getAttribute(PROPERTY_REF_ATTR, tag.attributes);\n        prop.unit = getAttribute(PROPERTY_UNIT_ATTR, tag.attributes);\n        prop.datatype = getAttribute(PROPERTY_DATATYPE_ATTR, tag.attributes);\n        prop.applies_to = getAttribute(PROPERTY_APPLIES_TO_ATTR, tag.attributes);\n        prop.id_ref = getAttribute(PROPERTY_ID_REF_ATTR, tag.attributes);\n\n        if (!prop.ref) {\n            throw new PhyloXmlError('property ref is missing');\n        }\n        if (!prop.datatype) {\n            throw new PhyloXmlError('property data-type is missing');\n        }\n        if (!prop.applies_to) {\n            throw new PhyloXmlError('property applies-to is missing');\n        }\n        if (!PROPERTY_REF_RE.test(prop.ref)) {\n            throw new PhyloXmlError('property ref is ill-formatted: ' + prop.ref);\n        }\n        if (!PROPERTY_DATATYPE_RE.test(prop.datatype)) {\n            throw new PhyloXmlError('property data-type is ill-formatted: ' + prop.datatype);\n        }\n        if (prop.unit && !PROPERTY_UNIT_RE.test(prop.unit)) {\n            throw new PhyloXmlError('property unit is ill-formatted: ' + prop.unit);\n        }\n\n        addToArrayInCurrentObject(PROPERTIES, prop);\n        _objectStack.push(prop);\n    }\n\n    function newProteinDomain(tag) {\n        var pd = {};\n        pd.name = null;\n        pd.from = getAttributeAsInt(PROTEINDOMAIN_FROM_ATTR, tag.attributes);\n        pd.to = getAttributeAsInt(PROTEINDOMAIN_TO_ATTR, tag.attributes);\n        pd.confidence = getAttributeAsFloat(PROTEINDOMAIN_CONFIDENCE_ATTR, tag.attributes);\n        pd.id = getAttribute(PROTEINDOMAIN_ID_ATTR, tag.attributes);\n        addToArrayInCurrentObject('domains', pd);\n        _objectStack.push(pd);\n    }\n\n    function newReference(tag) {\n        var reference = {};\n        reference.doi = getAttribute(REFERENCE_DOI_ATTR, tag.attributes);\n        addToArrayInCurrentObject('references', reference);\n        _objectStack.push(reference);\n    }\n\n    function newSequence(tag) {\n        var seq = {};\n        seq.type = getAttribute(SEQUENCE_TYPE_ATTR, tag.attributes);\n        seq.id_source = getAttribute(SEQUENCE_ID_SOURCE_ATTR, tag.attributes);\n        seq.id_ref = getAttribute(SEQUENCE_ID_REF_ATTR, tag.attributes);\n        addToArrayInCurrentObject(SEQUENCES, seq);\n        _objectStack.push(seq);\n    }\n\n    function newTaxonomy(tag) {\n        var tax = {};\n        tax.id_source = getAttribute(TAXONOMY_ID_SOURCE_ATTR, tag.attributes);\n        addToArrayInCurrentObject(TAXONOMIES, tax);\n        _objectStack.push(tax);\n    }\n\n    function newUri(tag) {\n        var uri = {};\n        uri.value = null;\n        uri.desc = getAttribute(URI_DESC_ATTR, tag.attributes);\n        uri.type = getAttribute(URI_TYPE_ATTR, tag.attributes);\n        addToArrayInCurrentObject('uris', uri);\n        _objectStack.push(uri);\n    }\n\n    function newPhylogeny(tag) {\n        var phy = {};\n        phy.rooted = getAttributeAsBoolean(PHYLOGENY_ROOTED_ATTR, tag.attributes);\n        if (phy.rooted === undefined) {\n            phy.rooted = true;\n        }\n        phy.rerootable = getAttributeAsBoolean(PHYLOGENY_REROOTABLE_ATTR, tag.attributes);\n        if (phy.rerootable === undefined) {\n            phy.rerootable = true;\n        }\n        phy.branch_length_unit = getAttribute(PHYLOGENY_BRANCH_LENGTH_UNIT_ATTR, tag.attributes);\n        phy.type = getAttribute(PHYLOGENY_TYPE_ATTR, tag.attributes);\n        _objectStack.push(phy);\n    }\n\n    function newSimpleCharacteristics() {\n        //To be deprecated.\n        var sc = {};\n        getCurrentObject().simple_characteristics = sc;\n        _objectStack.push(sc);\n    }\n\n\n    // --------------------------------------------------------------\n    // Functions for processing text\n    // --------------------------------------------------------------\n\n    function inAccession(text) {\n        getCurrentObject().value = text;\n    }\n\n    function inAnnotation(text) {\n        if (getCurrentTag() === ANNOTATION_DESC) {\n            getCurrentObject().desc = text;\n        }\n    }\n\n    function inAppType(text) {\n        if (getCurrentTag() === APPTYPE) {\n            getCurrentObject().desc = text;\n        }\n    }\n\n    function inBranchColor(text) {\n        if (getCurrentTag() === COLOR_RED) {\n            getCurrentObject().red = parseIntNumber(text);\n        }\n        else if (getCurrentTag() === COLOR_GREEN) {\n            getCurrentObject().green = parseIntNumber(text);\n        }\n        else if (getCurrentTag() === COLOR_BLUE) {\n            getCurrentObject().blue = parseIntNumber(text);\n        }\n        if (getCurrentTag() === COLOR_ALPHA) {\n            getCurrentObject().alpha = parseIntNumber(text);\n        }\n    }\n\n    function inClade(text) {\n        if (getCurrentTag() === CLADE_NAME) {\n            getCurrentClade().name = text;\n        }\n        else if (getCurrentTag() === CLADE_BRANCH_LENGTH) {\n            getCurrentClade().branch_length = parseFloatNumber(text);\n        }\n        else if (getCurrentTag() === CLADE_WIDTH) {\n            getCurrentClade().width = parseFloatNumber(text);\n        }\n    }\n\n    function inConfidence(text) {\n        getCurrentObject().value = parseFloatNumber(text);\n    }\n\n    function inDate(text) {\n        if (getCurrentTag() === DATE_DESC) {\n            getCurrentObject().desc = text;\n        }\n        else if (getCurrentTag() === DATE_VALUE) {\n            getCurrentObject().value = parseFloatNumber(text);\n        }\n        else if (getCurrentTag() === DATE_MINIMUM) {\n            getCurrentObject().minimum = parseFloatNumber(text);\n        }\n        else if (getCurrentTag() === DATE_MAXIMUM) {\n            getCurrentObject().maximum = parseFloatNumber(text);\n        }\n    }\n\n    function inDistribution(text) {\n        if (getCurrentTag() === DISTRIBUTION_DESC) {\n            getCurrentObject().desc = text;\n        }\n    }\n\n    function inEvents(text) {\n        if (getCurrentTag() === EVENTS_TYPE) {\n            getCurrentObject().type = text;\n        }\n        else if (getCurrentTag() === EVENTS_DUPLICATIONS) {\n            getCurrentObject().duplications = parseIntNumber(text);\n        }\n        else if (getCurrentTag() === EVENTS_SPECIATIONS) {\n            getCurrentObject().speciations = parseIntNumber(text);\n        }\n        else if (getCurrentTag() === EVENTS_LOSSES) {\n            getCurrentObject().losses = parseIntNumber(text);\n        }\n    }\n\n    function inId(text) {\n        getCurrentObject().value = text;\n    }\n\n    function inMolecularSequence(text) {\n        getCurrentObject().value = text;\n    }\n\n    function inPoint(text) {\n        if (getCurrentTag() === POINT_LAT) {\n            getCurrentObject().lat = text;\n        }\n        else if (getCurrentTag() === POINT_LONG) {\n            getCurrentObject().long = text;\n        }\n        else if (getCurrentTag() === POINT_ALT) {\n            getCurrentObject().alt = text;\n        }\n    }\n\n    function inProperty(text) {\n        getCurrentObject().value = text;\n    }\n\n    function inProteinDomain(text) {\n        getCurrentObject().name = text;\n    }\n\n    function inPhylogeny(text) {\n        if (getCurrentTag() === PHYLOGENY_NAME) {\n            getCurrentObject().name = text;\n        }\n        else if (getCurrentTag() === PHYLOGENY_DESCRIPTION) {\n            getCurrentObject().description = text;\n        }\n        else if (getCurrentTag() === PHYLOGENY_DATE) {\n            getCurrentObject().date = text;\n        }\n    }\n\n    function inReference(text) {\n        if (getCurrentTag() === REFERENCE_DESC) {\n            getCurrentObject().desc = text;\n        }\n    }\n\n    function inSequence(text) {\n        if (getCurrentTag() === SEQUENCE_SYMBOL) {\n            getCurrentObject().symbol = text;\n        }\n        else if (getCurrentTag() === SEQUENCE_NAME) {\n            getCurrentObject().name = text;\n        }\n        else if (getCurrentTag() === SEQUENCE_GENE_NAME) {\n            getCurrentObject().gene_name = text;\n        }\n        else if (getCurrentTag() === SEQUENCE_LOCATION) {\n            getCurrentObject().location = text;\n        }\n    }\n\n    function inTaxonomy(text) {\n        if (getCurrentTag() === TAXONOMY_CODE) {\n            getCurrentObject().code = text;\n        }\n        else if (getCurrentTag() === TAXONOMY_SCIENTIFIC_NAME) {\n            getCurrentObject().scientific_name = text;\n        }\n        else if (getCurrentTag() === TAXONOMY_AUTHORITY) {\n            getCurrentObject().authority = text;\n        }\n        else if (getCurrentTag() === TAXONOMY_COMMON_NAME) {\n            getCurrentObject().common_name = text;\n        }\n        else if (getCurrentTag() === TAXONOMY_SYNONYM) {\n            addToArrayInCurrentObject(TAXONOMY_SYNONYMS, text);\n        }\n        else if (getCurrentTag() === TAXONOMY_RANK) {\n            getCurrentObject().rank = text;\n        }\n    }\n\n    function inUri(text) {\n        getCurrentObject().value = text;\n    }\n\n    function inSimpleCharacteristics(text) {\n        //To be deprecated.\n        if (getCurrentTag() === X_SIMPLE_CHARACTERISTIC_COUNTRY) {\n            getCurrentObject().country = text;\n        }\n        else if (getCurrentTag() === X_SIMPLE_CHARACTERISTIC_HOST) {\n            getCurrentObject().host = text;\n        }\n        else if (getCurrentTag() === X_SIMPLE_CHARACTERISTIC_YEAR) {\n            getCurrentObject().year = text;\n        }\n        else if (getCurrentTag() === X_SIMPLE_CHARACTERISTIC_HA) {\n            getCurrentObject().ha = text;\n        }\n        else if (getCurrentTag() === X_SIMPLE_CHARACTERISTIC_NA) {\n            getCurrentObject().na = text;\n        }\n    }\n\n    // --------------------------------------------------------------\n    // Functions for SAX parser\n    // --------------------------------------------------------------\n    function phyloxmlOnopentag(tag) {\n        _tagStack.push(tag.name);\n        switch (tag.name) {\n            case CLADE:\n                newClade(tag);\n                break;\n            case ACCESSION:\n                newAccession(tag);\n                break;\n            case ANNOTATION:\n                newAnnotation(tag);\n                break;\n            case CLADE_RELATION:\n                if (_tagStack.get(1) === PHYLOGENY) {\n                    newCladeRelation(tag);\n                }\n                break;\n            case COLOR:\n                newBranchColor();\n                break;\n            case CONFIDENCE:\n                newConfidence(tag);\n                break;\n            case CROSS_REFERENCES:\n                newCrossReferences();\n                break;\n            case DATE:\n                if (_tagStack.get(1) === CLADE) {\n                    newDate(tag);\n                }\n                break;\n            case DISTRIBUTION:\n                newDistribution(tag);\n                break;\n            case DOMAIN_ARCHITECTURE:\n                newDomainArchitecture(tag);\n                break;\n            case EVENTS:\n                newEvents();\n                break;\n            case ID:\n                newId(tag);\n                break;\n            case MOLSEQ:\n                newMolecularSequence(tag);\n                break;\n            case POINT:\n                newPoint(tag);\n                break;\n            case PROTEINDOMAIN:\n                newProteinDomain(tag);\n                break;\n            case PHYLOGENY:\n                newPhylogeny(tag);\n                break;\n            case PROPERTY:\n                newProperty(tag);\n                break;\n            case REFERENCE:\n                newReference(tag);\n                break;\n            case SEQUENCE:\n                newSequence(tag);\n                break;\n            case SEQUENCE_RELATION:\n                if (_tagStack.get(1) === PHYLOGENY) {\n                    newSequenceRelation(tag);\n                }\n                break;\n            case TAXONOMY:\n                newTaxonomy(tag);\n                break;\n            case URI:\n                newUri(tag);\n                break;\n            case X_SIMPLE_CHARACTERISTICS:\n                //To be deprecated.\n                newSimpleCharacteristics();\n                break;\n            default:\n        }\n    }\n\n    function phyloxmlOnclosetag(tag) {\n        if (tag === CLADE) {\n            _tagStack.pop();\n            _objectStack.pop();\n            _cladeStack.pop();\n        }\n        else if (\n            tag === ACCESSION\n            || tag === ANNOTATION\n            || ( tag === CLADE_RELATION && (_tagStack.get(1) === PHYLOGENY) )\n            || tag === COLOR\n            || tag === CONFIDENCE\n            || tag === CROSS_REFERENCES\n            || ( tag === DATE && (_tagStack.get(1) === CLADE) )\n            || tag === DISTRIBUTION\n            || tag === TAXONOMY\n            || tag === ID\n            || tag === EVENTS\n            || tag === MOLSEQ\n            || tag === REFERENCE\n            || tag === DOMAIN_ARCHITECTURE\n            || tag === PROTEINDOMAIN\n            || tag === SEQUENCE\n            || ( tag === SEQUENCE_RELATION && (_tagStack.get(1) === PHYLOGENY) )\n            || tag === PROPERTY\n            || tag === POINT\n            || tag === URI\n            || tag === X_SIMPLE_CHARACTERISTICS) {\n            _tagStack.pop();\n            _objectStack.pop();\n        }\n        else if (!(tag === PHYLOGENY || tag === PHYLOXML)) {\n            _tagStack.pop();\n        }\n        else if (tag === PHYLOGENY) {\n            phyloxmlOnClosetagSanityCheck();\n            _phylogenies.push(_phylogeny);\n            startNewPhylogeny();\n        }\n    }\n\n    function phyloxmlOntext(text) {\n        var parentTag = _tagStack.get(1);\n        var currentTag = _tagStack.peek();\n        if (parentTag === CLADE) {\n            inClade(text);\n        }\n        else if (parentTag === ANNOTATION) {\n            inAnnotation(text);\n        }\n        else if (parentTag === COLOR) {\n            inBranchColor(text);\n        }\n        else if (parentTag === DATE) {\n            inDate(text);\n        }\n        else if (parentTag === DISTRIBUTION) {\n            inDistribution(text);\n        }\n        else if (parentTag === EVENTS) {\n            inEvents(text);\n        }\n        else if (parentTag === REFERENCE) {\n            inReference(text);\n        }\n        else if (parentTag === PHYLOGENY) {\n            inPhylogeny(text);\n        }\n        else if (parentTag === POINT) {\n            inPoint(text);\n        }\n        else if (parentTag === SEQUENCE) {\n            inSequence(text);\n        }\n        else if (parentTag === TAXONOMY) {\n            inTaxonomy(text);\n        }\n        if (currentTag === ACCESSION) {\n            inAccession(text);\n        }\n        else if (currentTag === APPTYPE) {\n            inAppType(text);\n        }\n        else if (currentTag === CONFIDENCE) {\n            inConfidence(text);\n        }\n        else if (currentTag === ID) {\n            inId(text);\n        }\n        else if (currentTag === MOLSEQ) {\n            inMolecularSequence(text);\n        }\n        else if (currentTag === PROTEINDOMAIN) {\n            inProteinDomain(text);\n        }\n        else if (currentTag === PROPERTY) {\n            inProperty(text);\n        }\n        else if (currentTag === URI) {\n            inUri(text);\n        }\n        else if (parentTag === X_SIMPLE_CHARACTERISTICS) {\n            inSimpleCharacteristics(text);\n        }\n    }\n\n    function phyloxmlOnerror(error) {\n        throw error;\n    }\n\n    function addPhyloxmlParserEvents(sax_parser) {\n        sax_parser.onopentag = phyloxmlOnopentag;\n        sax_parser.onclosetag = phyloxmlOnclosetag;\n        sax_parser.ontext = phyloxmlOntext;\n        sax_parser.onerror = phyloxmlOnerror;\n        // Ignoring: oncdata, oncomment, ondoctype\n    }\n\n    // --------------------------------------------------------------\n    // Helper functions\n    // --------------------------------------------------------------\n    function getCurrentClade() {\n        return _cladeStack.peek();\n    }\n\n    function getCurrentTag() {\n        return _tagStack.peek();\n    }\n\n    function getCurrentObject() {\n        return _objectStack.peek();\n    }\n\n    function getAttribute(attribute_name, attributes) {\n        if (attribute_name in attributes) {\n            return attributes[attribute_name];\n        }\n        return undefined;\n    }\n\n    function getAttributeAsInt(attribute_name, attributes) {\n        if (attribute_name in attributes) {\n            return parseIntNumber(attributes[attribute_name]);\n        }\n        return undefined;\n    }\n\n    function getAttributeAsFloat(attribute_name, attributes) {\n        if (attribute_name in attributes) {\n            return parseFloatNumber(attributes[attribute_name]);\n        }\n        return undefined;\n    }\n\n    function getAttributeAsBoolean(attribute_name, attributes) {\n        if (attribute_name in attributes) {\n            return parseBoolean(attributes[attribute_name]);\n        }\n        return undefined;\n    }\n\n    function addToArrayInCurrentObject(name, value) {\n        var parent = null;\n        if (getCurrentObject()) {\n            parent = getCurrentObject();\n        }\n        else {\n            parent = _phylogeny;\n        }\n        var ary = parent[name];\n        if (ary) {\n            ary.push(value);\n        }\n        else {\n            parent[name] = [value];\n        }\n    }\n\n    function addToArrayInCurrentObjectUnnamed(value) {\n        var obj = getCurrentObject();\n        obj.push(value);\n    }\n\n    function parseFloatNumber(text) {\n        var f = parseFloat(text);\n        if (isNaN(f)) {\n            throw new PhyloXmlError(\"could not parse floating point number from '\" + text + \"'\");\n        }\n        return f;\n    }\n\n    function parseIntNumber(text) {\n        var i = parseInt(text);\n        if (isNaN(i)) {\n            throw new PhyloXmlError(\"could not parse integer number from '\" + text + \"'\");\n        }\n        return i;\n    }\n\n    function parseBoolean(text) {\n        if (text === 'true') {\n            return true;\n        }\n        else if (text === 'false') {\n            return false;\n        }\n        else {\n            throw new PhyloXmlError(\"could not parse boolean from '\" + text + \"'\");\n        }\n    }\n\n    function startNewPhylogeny() {\n        _phylogeny = null;\n        _cladeStack = new Stack();\n        _tagStack = new Stack();\n        _objectStack = new Stack();\n    }\n\n    function phyloxmlOnClosetagSanityCheck() {\n        if (!(_cladeStack.isEmpty() && _objectStack.isEmpty() )) {\n            throw new PhyloXmlError('severe phyloXML format error')\n        }\n    }\n\n    function finalSanityCheck() {\n        if (!_tagStack.isEmpty()) {\n            throw new PhyloXmlError('severe phyloXML format error');\n        }\n    }\n\n    // --------------------------------------------------------------\n    // Stack\n    // --------------------------------------------------------------\n    function Stack() {\n        this._stack = [];\n        this.pop = function () {\n            var p = this._stack.pop();\n            if (p === undefined) {\n                throw new Error('severe phyloXML format error')\n            }\n            return p;\n        };\n        this.push = function (item) {\n            this._stack.push(item);\n        };\n        this.peek = function () {\n            return this._stack[this._stack.length - 1];\n        };\n        this.get = function (i) {\n            return this._stack[this._stack.length - (1 + i)];\n        };\n        this.length = function () {\n            return this._stack.length;\n        };\n        this.isEmpty = function () {\n            return this._stack.length < 1;\n        };\n    }\n\n    // --------------------------------------------------------------\n    // phyloXML error\n    // --------------------------------------------------------------\n    function PhyloXmlError(message) {\n        this.name = 'phyloXmlError';\n        this.message = message || 'phyloXML format error';\n    }\n\n    PhyloXmlError.prototype = Object.create(Error.prototype);\n\n    // --------------------------------------------------------------\n    // To phyloXML\n    // --------------------------------------------------------------\n    phyloXml.toPhyloXML_ = function (phy, dec) {\n        var x = '';\n        var ind = '';\n        openPhyloXml();\n        openPhylogeny(phy, [PHYLOGENY_ROOTED_ATTR, PHYLOGENY_REROOTABLE_ATTR,\n            PHYLOGENY_BRANCH_LENGTH_UNIT_ATTR, PHYLOGENY_TYPE_ATTR]);\n        addSingleElement(PHYLOGENY_NAME, phy.name);\n        addSingleElement(PHYLOGENY_DESCRIPTION, phy.description);\n        addSingleElement(PHYLOGENY_DATE, phy.date);\n        if (phy.children && phy.children.length === 1) {\n            toPhyloXMLhelper(phy.children[0]);\n        }\n        closePhylogeny();\n        closePhyloXml();\n        return x;\n\n        function toPhyloXMLhelper(node) {\n            var l;\n            var i;\n\n            openClade(node, [CLADE_ID_SOURCE_ATTR, CLADE_COLLAPSE_ATTR]);\n\n            addSingleElement(CLADE_NAME, node.name);\n\n            if (node[CLADE_BRANCH_LENGTH]) {\n                addSingleElement(CLADE_BRANCH_LENGTH, (dec && dec > 0) ? roundNumber(node[CLADE_BRANCH_LENGTH], dec) : node[CLADE_BRANCH_LENGTH]);\n            }\n\n            if (node[CONFIDENCES] && node[CONFIDENCES].length > 0) {\n                l = node[CONFIDENCES].length;\n                for (i = 0; i < l; ++i) {\n                    var conf = node[CONFIDENCES][i];\n                    if (!conf[CONFIDENCE_TYPE_ATTR]) {\n                        conf[CONFIDENCE_TYPE_ATTR] = UNKNOWN;\n                    }\n                    addSingleElement(CONFIDENCE, conf.value, conf,\n                        [CONFIDENCE_TYPE_ATTR, CONFIDENCE_STDDEV_ATTR]);\n                }\n            }\n\n            addSingleElement(CLADE_WIDTH, node[CLADE_WIDTH]);\n\n            if (node[COLOR]) {\n                var col = node[COLOR];\n                open(COLOR);\n                addSingleElement(COLOR_RED, col[COLOR_RED]);\n                addSingleElement(COLOR_GREEN, col[COLOR_GREEN]);\n                addSingleElement(COLOR_BLUE, col[COLOR_BLUE]);\n                addSingleElement(COLOR_ALPHA, col[COLOR_ALPHA]);\n                close(COLOR);\n            }\n\n            if (node[TAXONOMIES] && node[TAXONOMIES].length > 0) {\n                l = node[TAXONOMIES].length;\n                for (i = 0; i < l; ++i) {\n                    var tax = node[TAXONOMIES][i];\n                    open(TAXONOMY, tax, [TAXONOMY_ID_SOURCE_ATTR]);\n                    if (tax[ID]) {\n                        if (!tax[ID][ID_PROVIDER_ATTR]) {\n                            tax[ID][ID_PROVIDER_ATTR] = UNKNOWN;\n                        }\n                        addSingleElement(ID, tax[ID].value, tax[ID],\n                            [ID_PROVIDER_ATTR]);\n                    }\n                    addSingleElement(TAXONOMY_CODE, tax[TAXONOMY_CODE]);\n                    addSingleElement(TAXONOMY_SCIENTIFIC_NAME, tax[TAXONOMY_SCIENTIFIC_NAME]);\n                    addSingleElement(TAXONOMY_AUTHORITY, tax[TAXONOMY_AUTHORITY]);\n                    addSingleElement(TAXONOMY_COMMON_NAME, tax[TAXONOMY_COMMON_NAME]);\n                    if (tax[TAXONOMY_SYNONYMS] && tax[TAXONOMY_SYNONYMS].length > 0) {\n                        var ll = tax[TAXONOMY_SYNONYMS].length;\n                        for (var ii = 0; ii < ll; ++ii) {\n                            addSingleElement(TAXONOMY_SYNONYM, tax[TAXONOMY_SYNONYMS][ii]);\n                        }\n                    }\n                    addSingleElement(TAXONOMY_RANK, tax[TAXONOMY_RANK]);\n                    close(TAXONOMY);\n                }\n            }\n\n            if (node[SEQUENCES] && node[SEQUENCES].length > 0) {\n                l = node[SEQUENCES].length;\n                for (i = 0; i < l; ++i) {\n                    var seq = node[SEQUENCES][i];\n                    open(SEQUENCE, seq, [SEQUENCE_TYPE_ATTR, SEQUENCE_ID_SOURCE_ATTR, SEQUENCE_ID_REF_ATTR]);\n                    addSingleElement(SEQUENCE_SYMBOL, seq[SEQUENCE_SYMBOL]);\n                    if (seq[ACCESSION]) {\n                        if (!seq[ACCESSION][ACCESSION_SOURCE_ATTR]) {\n                            seq[ACCESSION][ACCESSION_SOURCE_ATTR] = UNKNOWN;\n                        }\n                        addSingleElement(ACCESSION, seq[ACCESSION].value, seq[ACCESSION],\n                            [ACCESSION_SOURCE_ATTR, ACCESSION_COMMENT_ATTR]);\n                    }\n                    addSingleElement(SEQUENCE_NAME, seq[SEQUENCE_NAME]);\n                    addSingleElement(SEQUENCE_GENE_NAME, seq[SEQUENCE_GENE_NAME]);\n                    addSingleElement(SEQUENCE_LOCATION, seq[SEQUENCE_LOCATION]);\n                    if (seq[MOLSEQ]) {\n                        addSingleElement(MOLSEQ, seq[MOLSEQ].value, seq[MOLSEQ],\n                            [MOLSEQ_IS_ALIGNED_ATTR]);\n                    }\n                    close(SEQUENCE);\n                }\n            }\n\n            if (node[EVENTS]) {\n                var ev = node[EVENTS];\n                open(EVENTS);\n                addSingleElement(EVENTS_TYPE, ev[EVENTS_TYPE]);\n                addSingleElement(EVENTS_DUPLICATIONS, ev[EVENTS_DUPLICATIONS]);\n                addSingleElement(EVENTS_SPECIATIONS, ev[EVENTS_SPECIATIONS]);\n                addSingleElement(EVENTS_LOSSES, ev[EVENTS_LOSSES]);\n                if (ev[CONFIDENCE]) {\n                    var evconf = ev[CONFIDENCE];\n                    addSingleElement(CONFIDENCE, evconf.value, evconf,\n                        [CONFIDENCE_TYPE_ATTR, CONFIDENCE_STDDEV_ATTR]);\n                }\n                close(EVENTS);\n            }\n\n            if (node[PROPERTIES] && node[PROPERTIES].length > 0) {\n                l = node[PROPERTIES].length;\n                for (i = 0; i < l; ++i) {\n                    var prop = node[PROPERTIES][i];\n                    if (!prop[PROPERTY_APPLIES_TO_ATTR]) {\n                        throw new PhyloXmlError(\"property applies-to is missing\");\n                    }\n                    if (!prop[PROPERTY_DATATYPE_ATTR]) {\n                        throw new PhyloXmlError(\"property data-type is missing\");\n                    }\n                    if (!prop[PROPERTY_REF_ATTR]) {\n                        throw new PhyloXmlError(\"property ref is missing\");\n                    }\n                    addSingleElement(PROPERTY, prop.value, prop, [PROPERTY_REF_ATTR,\n                        PROPERTY_UNIT_ATTR, PROPERTY_DATATYPE_ATTR, PROPERTY_APPLIES_TO_ATTR,\n                        PROPERTY_ID_REF_ATTR]);\n                }\n            }\n\n            if (node.children) {\n                l = node.children.length;\n                for (i = 0; i < l; ++i) {\n                    toPhyloXMLhelper(node.children[i]);\n                }\n            }\n            else if (node._children) {\n                l = node._children.length;\n                for (i = 0; i < l; ++i) {\n                    toPhyloXMLhelper(node._children[i]);\n                }\n            }\n\n            closeClade();\n\n        } // toPhyloXMLhelper\n\n        function addSingleElement(elemName, elemValue, object, attributeNames) {\n            if ((elemValue !== null) && (elemValue !== undefined)) {\n                if (typeof elemValue === 'string' || elemValue instanceof String) {\n                    elemValue = elemValue.trim();\n                    if (elemValue.length > 0) {\n                        if ((elemValue.indexOf('&') > -1) || ( elemValue.indexOf('<') > -1) || ( elemValue.indexOf('>') > -1)\n                            || (elemValue.indexOf('\"') > -1) || ( elemValue.indexOf(\"'\") > -1)) {\n                            elemValue = replaceUnsafeChars(elemValue);\n                        }\n                    }\n                    else {\n                        return;\n                    }\n                }\n                x += ( ind + '<' + elemName);\n                if (object && attributeNames && attributeNames.length > 0) {\n                    addAttributes(object, attributeNames);\n                }\n                x += ( '>' + elemValue + '</' + elemName + '>\\n');\n            }\n        }\n\n        function open(elemName, object, attributeNames) {\n            if (object && attributeNames && attributeNames.length > 0) {\n                x += ( ind + '<' + elemName);\n                addAttributes(object, attributeNames);\n                x += '>\\n';\n            }\n            else {\n                x += (ind + '<' + elemName + '>\\n' );\n            }\n            ind = ind + ' ';\n        }\n\n        function close(elemName) {\n            reduceInd();\n            x += ( ind + '</' + elemName + '>\\n' );\n        }\n\n        function openClade(object, attributeNames) {\n            if (object && attributeNames && attributeNames.length > 0) {\n                x += ind + '<clade';\n                addAttributes(object, attributeNames);\n                x += '>\\n';\n            }\n            else {\n                x += ind + '<clade>\\n';\n            }\n            ind = ind + ' ';\n        }\n\n        function closeClade() {\n            reduceInd();\n            x += ind + '</clade>\\n';\n        }\n\n        function openPhylogeny(object, attributeNames) {\n            if (object[PHYLOGENY_ROOTED_ATTR] === undefined ||\n                object[PHYLOGENY_ROOTED_ATTR] === null) {\n                object[PHYLOGENY_ROOTED_ATTR] = true;\n            }\n            if (object[PHYLOGENY_REROOTABLE_ATTR] === undefined ||\n                object[PHYLOGENY_REROOTABLE_ATTR] === null) {\n                object[PHYLOGENY_REROOTABLE_ATTR] = true;\n            }\n            if (object && attributeNames && attributeNames.length > 0) {\n                x += ' <phylogeny';\n                addAttributes(object, attributeNames);\n                x += '>\\n';\n            }\n            else {\n                x += ' <phylogeny>\\n';\n            }\n            ind = '  ';\n        }\n\n        function closePhylogeny() {\n            ind = ' ';\n            x += ' </phylogeny>\\n';\n        }\n\n        function openPhyloXml() {\n            ind = '';\n            x += '<?xml version=\"1.0\" encoding=\"UTF-8\"?>\\n';\n            x += '<phyloxml xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:schemaLocation=\"http://www.phyloxml.org http://www.phyloxml.org/1.20/phyloxml.xsd\" xmlns=\"http://www.phyloxml.org\">\\n';\n        }\n\n        function closePhyloXml() {\n            x += '</phyloxml>\\n';\n        }\n\n        function addAttributes(object, attributeNames) {\n            var l = attributeNames.length;\n            for (var i = 0; i < l; ++i) {\n                var attributeName = attributeNames[i];\n                if (attributeName && ( object[attributeName] !== undefined && object[attributeName] !== null )) {\n                    x += (' ' + attributeName + '=\"' + object[attributeName] + '\"' );\n                }\n            }\n        }\n\n        function roundNumber(num, dec) {\n            return Math.round(num * Math.pow(10, dec)) / Math.pow(10, dec);\n        }\n\n        function replaceUnsafeChars(str) {\n            return str\n                .replace(/&/g, \"&amp;\")\n                .replace(/</g, \"&lt;\")\n                .replace(/>/g, \"&gt;\")\n                .replace(/\"/g, \"&quot;\")\n                .replace(/'/g, \"&apos;\");\n        }\n\n        function reduceInd() {\n            var l = ind.length;\n            ind = '';\n            for (var i = 0; i <= l - 2; ++i) {\n                ind += ' ';\n            }\n        }\n\n    }; // toPhyloXML_\n\n\n    // --------------------------------------------------------------\n    // Main functions\n    // --------------------------------------------------------------\n\n    /**\n     * To parse phyloXML formatted trees from a stream asynchronously.\n     *\n     * @param stream - The stream to be parsed.\n     * @param parseOptions - Options dict for the SAX parser.\n     *                       (example: {trim: true, normalize: true}).\n     */\n    phyloXml.parseAsync = function (stream, parseOptions) {\n        _phylogenies = [];\n        startNewPhylogeny();\n        var sax_parser = sax.createStream(true, parseOptions);\n        addPhyloxmlParserEvents(sax_parser);\n        stream.pipe(sax_parser);\n\n        sax_parser.on('end', function () {\n            finalSanityCheck();\n            var len = _phylogenies.length;\n            console.log(\"parsed \" + len + \" trees\");\n            // for (var i = 0; i < len; ++i) {\n            //    do something, for example:\n            //    var str = JSON.stringify(_phylogenies[i], null, 2);\n            //}\n        });\n\n        process.stdout.on('drain', function () {\n            stream.resume();\n        });\n    };\n\n    /**\n     * To parse a phyloXML formatted source.\n     *\n     * @param source - The source.\n     * @param parseOptions - Options dict for the SAX parser\n     *                       (example: {trim: true, normalize: true}).\n     * @returns {*} - Array of phylogentic tree objects.\n     */\n    phyloXml.parse = function (source, parseOptions) {\n        source && ( source = source.toString().trim());\n\n        if (!source) {\n            throw new Error('phyloXML source is empty');\n        }\n\n        _phylogenies = [];\n        startNewPhylogeny();\n        var sax_parser = sax.parser(true, parseOptions);\n        addPhyloxmlParserEvents(sax_parser);\n\n        sax_parser.onend = function () {\n            finalSanityCheck();\n        };\n\n        sax_parser.write(source).close();\n        return _phylogenies;\n    };\n\n\n    /**\n     * To convert a phylogentic tree object to a phyloXML formatted string.\n     *\n     * @param phy - A phylogentic tree object.\n     * @param decPointsMax - Maximal number of decimal points for branch lengths (optional).\n     * @returns A phyloXML formatted string.\n     */\n    phyloXml.toPhyloXML = function (phy, decPointsMax) {\n        return phyloXml.toPhyloXML_(phy, decPointsMax);\n    };\n\n    // --------------------------------------------------------------\n    // For exporting\n    // --------------------------------------------------------------\n    if ( true && module.exports && !__webpack_require__.g.xmldocAssumeBrowser)\n        module.exports.phyloXml = phyloXml;\n    else if (typeof window !== \"undefined\")\n        window.phyloXml = phyloXml;\n    else\n        this.phyloXml = phyloXml;\n})();\n\n\n//# sourceURL=webpack://PhyloIO/./src/phyloxml.js?");
 
 /***/ }),
 
@@ -8746,7 +8644,7 @@ eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpac
   \**********************/
 /***/ ((module, __unused_webpack_exports, __webpack_require__) => {
 
-eval("const fs = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\")\nconst d3 = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\nfunction traverse(o,func_pre, func_post) {\n\n    if (func_pre){\n        func_pre.apply(this,[o,o[\"children\"]])\n    }\n\n    if(o[\"children\"]){\n\n        for (var c in o[\"children\"] ) {\n\n            var child = o[\"children\"][c]\n\n            child = traverse(child, func_pre, func_post)\n\n            if (func_post) {\n                func_post.apply(this,[child,o])\n            }\n\n\n        }\n\n\n    }\n\n    return o\n\n}\n\nfunction build_table(hierarchy){\n\n    traverse(hierarchy, function(node,children){\n        delete node.left_\n        delete node.right_\n        delete node.weight_\n    }, null)\n\n    var n = hierarchy.leaves().length\n    var X = Array.from(new Array(n), _ => Array(3).fill(null));\n    var S2I = {} //Array(n).fill(0)\n    var I2S = Array(n).fill(null)\n    var n_edges = 0\n\n    var nzl = []\n    traverse(hierarchy, null, function(node,children){nzl.push(node)})\n    nzl.push(hierarchy)\n    var nz = nzl.entries()\n\n    var n1 = nz.next()\n    var n2 = nz.next()\n    var i = 0\n\n    while (true) {\n\n        var node = n1.value[1]\n        var node2 = n2.value[1]\n        var p = node.parent\n        var ii;\n\n        // Do work\n        if (!(node.hasOwnProperty('children'))) {\n            I2S[i] = node.data.name\n            S2I[I2S[i]] = i\n            node.weight_ = 0\n            node.left_ = i\n            node.right_ = i\n            i += 1\n        }\n\n        // propagate up\n        if (typeof p != \"undefined\"){\n            p.left_ = p.hasOwnProperty('left_') ? Math.min(p.left_, node.left_) : node.left_\n            p.right_ = p.hasOwnProperty('right_') ? Math.max(p.right_, node.right_) : node.right_\n            if (p.hasOwnProperty('weight_')){ p.weight_ = p.weight_ + node.weight_ + 1} else {p.weight_ = node.weight_  +=1}\n        }\n\n        if (node.hasOwnProperty('children')) {\n\n            if( node2.hasOwnProperty('weight_') && node2.weight_ > 0 ){ii = node.left_} else { ii = node.right_}\n            X[ii][0] = node.left_\n            X[ii][1] = node.right_\n            if (node.data.hasOwnProperty('branch_length')){\n                X[ii][2] = node.data.branch_length\n            }\n            else {\n                X[ii][2] = 1\n            }\n\n\n            n_edges += 1\n\n        }\n\n        n1 = n2\n        n2 = nz.next()\n\n        if (n2.done){\n\n\n            // process seed node, w=0\n            ii = hierarchy.leaves().length-1\n            X[ii][0] = n1.value[1].left_\n            X[ii][1] = n1.value[1].right_\n            X[ii][2] = n1.value[1].data.branch_length\n            n_edges += 1\n\n            break\n        }\n\n    }\n\n\n\n    if (X[0][0] !== null){\n        X[0] = Array(3).fill(null)\n\n    }\n\n    n_edges = 0\n    for (const n2Key in X) {\n        if (X[n2Key][0] !== null){\n            n_edges++\n        }\n\n    }\n\n    var leaf_to_dist = {}\n\n    hierarchy.leaves().forEach( e=> { leaf_to_dist[e.data.name] = e.data.branch_length })\n\n\n    return {'table': X, 'n_edges': n_edges, 'I2S': I2S, 'S2I': S2I, 'leaf_dict': leaf_to_dist}\n\n\n}\n\nfunction reverse_order(child,parent){\n\n    child.children.push(parent)\n    parent.parent =child\n\n    const b = parent.children.indexOf(child);\n    if (b > -1) {\n        parent.children.splice(b, 1);\n    }\n}\n\nfunction reroot_hierarchy(hierarchy, leaf_name){\n\n\n    let leaf = hierarchy.leaves().find(element => element.data.name == leaf_name );\n\n    //  INVERT PATH TO ROOT\n    var ancestors  = leaf.ancestors()\n    leaf.children = []\n    leaf.root = true\n\n\n    //leaf.branch_length_before_reverse = leaf.data.branch_length\n\n/*\n    for (var j = 0; j < leaf.parent.children.length; j++) {\n\n            if (leaf.parent.children[j] != leaf){\n\n                leaf.data.branch_length = leaf.parent.children[j].data.branch_length\n                break\n\n            }\n\n        }\n\n */\n\n\n    var index\n    for (index = 0; index < ancestors.length; index++) {\n\n        let child = (index === 0) ? leaf : ancestors[index-1]\n        let parent = ancestors[index]\n\n\n        /*\n        parent.branch_length_before_reverse = parent.data.branch_length\n        if (child.branch_length_before_reverse){\n            parent.data.branch_length = child.branch_length_before_reverse\n        }\n        else{\n            parent.data.branch_length = child.data.branch_length\n        }\n        */\n\n\n        reverse_order(child,parent)\n    }\n\n    //DESTROY ROOT\n    var old_root_children = ancestors[ancestors.length-1].children\n\n    var c = ancestors[ancestors.length-2].children.indexOf(ancestors[ancestors.length-1]);\n    if (c > -1) {\n        ancestors[ancestors.length-2].children.splice(c, 1);\n    }\n    for (var j = 0; j < old_root_children.length; j++) {\n\n        let parent = old_root_children[j]\n        let child = ancestors[ancestors.length-2]\n\n        child.children.push(parent)\n        parent.parent =child\n    }\n\n    leaf.parent = null\n    leaf.data.branch_length = leaf.children[0].data.branch_length\n\n    return leaf\n}\n\nfunction addLogo(svg) {\n    // TODO load with ajax\n    var logo_xml = '<svg id=\"exportLogo\" x=\"0\" y=\"0\"><g id=\"g4169\"> <path d=\"m 29.606259,23.679171 1.905511,0 c 0.193778,0.617882 0.290669,1.188505 0.290672,1.711869 0.466506,-0.545171 1.022728,-0.99222 1.668668,-1.341146 0.653108,-0.348904 1.295455,-0.523362 1.927043,-0.523373 0.976073,1.1e-5 1.86603,0.261698 2.669869,0.78506 0.810999,0.523383 1.442581,1.221215 1.894747,2.093495 0.459321,0.865028 0.688986,1.802739 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style=\"fill:#939598\" id=\"polygon461\" points=\"5.7,0.23 11.86,0.23 11.86,1.65 7.12,1.65 7.12,6.04 11.86,6.04 11.86,7.46 11.86,7.46 5.7,7.46 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon463\" points=\"0,7.08 3.51,7.08 3.51,8.49 1.43,8.49 1.45,15.84 12.68,15.84 12.68,17.26 12.68,17.26 0.04,17.26 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon465\" points=\"10.49,11.02 10.49,12.44 10.49,12.44 2.84,12.44 2.84,7.79 4.26,7.79 4.26,11.02 \" class=\"cls-2\" transform=\"translate(0,-0.15225398)\" /> <polygon style=\"fill:#bcbec0\" id=\"polygon467\" points=\"4.26,4.55 4.26,7.79 4.26,7.79 2.84,7.79 2.84,3.13 6.41,3.13 6.41,4.55 \" class=\"cls-3\" transform=\"matrix(1,0,0,0.85463687,0,0.4549866)\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-3\" width=\"1.4240631\" height=\"1.7319686\" x=\"2.8396611\" y=\"7.0799503\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-6\" width=\"1.3864813\" height=\"1.6934805\" x=\"5.7012329\" y=\"2.9206221\" /> </g> <g id=\"g4005\"> <g id=\"g3984\"> <polygon class=\"cls-2\" points=\"94.93,12.33 94.93,10.91 99.87,10.91 99.87,6.46 94.93,6.46 94.93,5.04 101.29,5.04 101.29,12.33 101.29,12.33 \" id=\"polygon453\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"94.72,17.36 94.72,15.94 104.87,15.94 104.9,5.41 102.74,5.41 102.74,3.99 106.32,3.99 106.29,17.36 106.29,17.36 \" id=\"polygon455\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"95.51,1.42 95.51,0 103.45,0 103.45,4.7 103.45,4.7 102.03,4.7 102.03,1.42 \" id=\"polygon457\" style=\"fill:#939598\" /> <polygon class=\"cls-3\" points=\"102.03,7.97 102.03,4.7 103.45,4.7 103.45,9.39 103.45,9.39 100.65,9.39 100.65,7.97 \" id=\"polygon459\" style=\"fill:#bcbec0\" /> <rect y=\"3.9876499\" x=\"102.02941\" height=\"1.4238259\" width=\"1.4579451\" id=\"rect3926\" style=\"fill:#939598;fill-opacity:1\" /> <rect y=\"7.884686\" x=\"99.887817\" height=\"1.6934805\" width=\"1.397205\" id=\"rect3926-7\" style=\"fill:#939598;fill-opacity:1\" /> </g> </g> </g> </g> </svg>';\n\n    svg.append(\"g\").html(logo_xml);\n\n}\n\nfunction getSVGString( svgNode ) {\n    svgNode.setAttribute('xlink', 'http://www.w3.org/1999/xlink');\n    var cssStyleText = getCSSStyles(svgNode);\n    cssStyleText += \"* {font-family:Helvetica}\"\n    appendCSS( cssStyleText, svgNode );\n\n    var serializer = new XMLSerializer();\n    var svgString = serializer.serializeToString(svgNode);\n    svgString = svgString.replace(/(\\w+)?:?xlink=/g, 'xmlns:xlink='); // Fix root xlink without namespace\n    svgString = svgString.replace(/NS\\d+:href/g, 'xlink:href'); // Safari NS namespace fix\n\n    return svgString;\n\n    function getCSSStyles( parentElement ) {\n        var selectorTextArr = [];\n\n        // Add Parent element Id and Classes to the list\n        selectorTextArr.push( '#'+parentElement.id );\n        for (var c = 0; c < parentElement.classList.length; c++)\n            if ( !contains('.'+parentElement.classList[c], selectorTextArr) )\n                selectorTextArr.push( '.'+parentElement.classList[c] );\n\n        // Add Children element Ids and Classes to the list\n        var nodes = parentElement.getElementsByTagName(\"*\");\n        for (var i = 0; i < nodes.length; i++) {\n            var id = nodes[i].id;\n            if ( !contains('#'+id, selectorTextArr) )\n                selectorTextArr.push( '#'+id );\n\n            var classes = nodes[i].classList;\n            for (var c = 0; c < classes.length; c++)\n                if ( !contains('.'+classes[c], selectorTextArr) )\n                    selectorTextArr.push( '.'+classes[c] );\n        }\n\n        // Extract CSS Rules\n        var extractedCSSText = \"\";\n        for (var i = 0; i < document.styleSheets.length; i++) {\n            var s = document.styleSheets[i];\n\n            try {\n                if(!s.cssRules) continue;\n            } catch( e ) {\n                if(e.name !== 'SecurityError') throw e; // for Firefox\n                continue;\n            }\n\n            var cssRules = s.cssRules;\n            for (var r = 0; r < cssRules.length; r++) {\n                if ( contains( cssRules[r].selectorText, selectorTextArr ) )\n                    extractedCSSText += cssRules[r].cssText;\n            }\n        }\n\n\n        return extractedCSSText;\n\n        function contains(str,arr) {\n            return arr.indexOf( str ) === -1 ? false : true;\n        }\n\n    }\n\n    function appendCSS( cssText, element ) {\n        var styleElement = document.createElement(\"style\");\n        styleElement.setAttribute(\"type\",\"text/css\");\n        styleElement.innerHTML = cssText;\n        var refNode = element.hasChildNodes() ? element.children[0] : null;\n        element.insertBefore( styleElement, refNode );\n    }\n}\n\nfunction svgString2Image( svgString, width, height, format, callback ) {\n    var format = format ? format : 'png';\n\n    var imgsrc = 'data:image/svg+xml;base64,'+ btoa( unescape( encodeURIComponent( svgString ) ) ); // Convert SVG string to dataurl\n\n    var canvas = document.createElement(\"canvas\");\n    var context = canvas.getContext(\"2d\");\n\n    canvas.width = width;\n    canvas.height = height;\n\n    var image = new Image;\n    image.onload = function() {\n\n        context.clearRect ( 0, 0, width, height );\n        context.fillStyle = \"#ffffff\";\n        context.fillRect(0, 0, width, height);\n        context.drawImage(image, 0, 0, width, height);\n\n        canvas.toBlob( function(blob) {\n            var filesize = Math.round( blob.length/1024 ) + ' KB';\n            if ( callback ) callback( blob, filesize );\n        });\n    };\n    image.src = imgsrc;\n}\n\nfunction screen_shot({ svg1, svg2, format } = {}){\n\n    addLogo(svg1);\n    var name1 = svg1.attr(\"id\");\n    var svgString1 = getSVGString(svg1.node());\n\n    var t = \"<svg xmlns=\\\"http://www.w3.org/2000/svg\\\" version=\\\"1.1\\\">\\n\" +\n        \"\\n\" +\n        \"  <g transform=\\\"translate(0,0)\\\">\\n\" +\n        svgString1 +\n        \"  </g>\\n\"\n\n    if(svg2){\n\n        addLogo(svg2);\n        var name2 = svg2.attr(\"id\");\n        var svgString2 = getSVGString(svg2.node());\n\n        var w = svg2.node().getBoundingClientRect().width\n        var h = svg2.node().getBoundingClientRect().height\n\n        t += '<line x1=\"' + (w + 5) +'\" y1=\"0\" x2=\"' + (w + 5) +'\" y2=\"' + h+'\" stroke=\"black\" />'\n\n        t += \"  <g transform=\\\"translate(\" + (w + 10)  +\",0)\\\">\\n\" +\n            svgString2 +\n            \"  </g>\\n\"\n\n    }\n\n    t += \"</svg> \"\n\n    if(format === 'svg') {\n\n        var blob = new Blob([t], {\"type\": \"image/svg+xml;base64,\"+ btoa(t)});\n        fs.saveAs(blob, name1+\".svg\");\n        svg1.select(\"#exportLogo\").remove();\n        if(svg2){svg2.select(\"#exportLogo\").remove();}\n\n    }\n\n    else if (format === 'png'){\n\n\n\n        var wi = svg1.node().getBoundingClientRect().width\n        var he = svg1.node().getBoundingClientRect().height\n\n        if(svg2){\n            wi = wi*2;\n        }\n\n        svgString2Image(t,  wi, he, 'png', save);\n\n        svg1.select(\"#exportLogo\").remove();\n        if(svg2){svg2.select(\"#exportLogo\").remove();}\n\n        function save(dataBlob, filesize) {\n            var filename = (name) ? name+\".\" : \"\";\n            fs.saveAs(dataBlob, filename+'phylo.io.png'); // FileSaver.js function\n        }\n\n    }\n}\n\n//Adapted from Extended Newick format parser in JavaScript.\n//Copyright (c) Miguel Pignatelli 2014 based on Jason Davies\nfunction parse_nhx(s) {\n    var ancestors = [];\n    var tree = {'data_nhx' : {}};\n    // var tokens = s.split(/\\s*(;|\\(|\\)|,|:)\\s*/);\n    //[&&NHX:D=N:G=ENSG00000139618:T=9606]\n    var tokens = s.split( /\\s*(;|\\(|\\)|\\[|\\]|,|:|=)\\s*/ );\n    for (var i=0; i<tokens.length; i++) {\n        var token = tokens[i];\n        switch (token) {\n            case '(': // new children\n                var subtree = {'data_nhx' : {}};\n                tree.children = [subtree];\n                ancestors.push(tree);\n                tree = subtree;\n                break;\n            case ',': // another branch\n                var subtree = {'data_nhx' : {}};\n                ancestors[ancestors.length-1].children.push(subtree);\n                tree = subtree;\n                break;\n            case ')': // optional name next\n                tree = ancestors.pop();\n                break;\n            case ':': // optional length next\n                break;\n            default:\n                var x = tokens[i-1];\n                // var x2 = tokens[i-2];\n                if (x == ')' || x == '(' || x == ',') {\n                    tree.name = token;\n                }\n                else if (x == ':') {\n                    var test_type = typeof token;\n                    if(!isNaN(token)){\n                        tree.branch_length = parseFloat(token);\n                    }\n                    // tree.length = parseFloat(token);\n                }\n                else if (x == '='){\n                    tree['data_nhx'][tokens[i-2]] = token\n                }\n                else {\n                    var test;\n                }\n        }\n    }\n    return tree;\n};\n\nfunction save_file_as(filename, data) {\n    const blob = new Blob([data], {type: 'text/csv'});\n    if(window.navigator.msSaveOrOpenBlob) {\n        window.navigator.msSaveBlob(blob, filename);\n    }\n    else{\n        const elem = window.document.createElement('a');\n        elem.href = window.URL.createObjectURL(blob);\n        elem.download = filename;\n        document.body.appendChild(elem);\n        elem.click();\n        document.body.removeChild(elem);\n    }\n}\n\nfunction compute_RF_Euc(X1,X2){\n\n    var n_good  = 0\n    var euclidian = 0.00\n\n    var x2_processed = []\n\n    for (var i = 0; i < X1.table.length; i++) {\n        var s1 = X1.table[i][0]\n        var e1 = X1.table[i][1]\n        var w1 = Math.abs(e1-s1)\n\n        if (w1 > 0){\n\n            var species =  X1.I2S.slice(s1,e1+1)\n            var index = []\n\n            for (const [name, idx] of Object.entries(X2.S2I)) {\n                if (species.includes(name)) {index.push(idx)}\n            }\n\n            if (index.length <= 0) {\n                continue\n            }\n\n            var s2 = Math.min.apply(null,index)\n            var e2 = Math.max.apply(null,index)\n            var w2 = Math.abs(e2-s2)\n\n            if (w1 == w2) {\n\n\n                if (X2.table[e2][0] == s2 && X2.table[e2][1] == e2) {\n                    n_good += 1\n                    euclidian += Math.abs(parseFloat(X1.table[i][2]) - parseFloat(X2.table[e2][2]) )\n                    x2_processed.push(e2)\n                }\n                else if (X2.table[s2][0] == s2 && X2.table[s2][1] == e2){\n\n                    n_good += 1\n                    euclidian += Math.abs(parseFloat(X1.table[i][2]) - parseFloat(X2.table[s2][2]) )\n                    x2_processed.push(s2)\n\n                }\n                else{\n                    euclidian += parseFloat(X1.table[i][2])\n\n                }\n\n            }\n\n\n            else{\n                euclidian += parseFloat(X1.table[i][2])\n            }\n\n\n\n\n\n\n        }\n\n    }\n\n\n    for (var k = 1; k < X2.table.length; k++) {\n        if (!x2_processed.includes(k)){\n\n            var d = parseFloat(X2.table[k][2])\n\n            if(!isNaN(d)) {\n                euclidian += d\n                x2_processed.push(k)\n            }\n\n        }\n    }\n\n    var leaf_dist = 0.00\n    for (var key of Object.keys(X1.leaf_dict)) {\n\n        leaf_dist += Math.abs(X1.leaf_dict[key] - X2.leaf_dict[key])\n    }\n\n    var euc = euclidian + leaf_dist\n\n\n    return {\n        'E':euc.toFixed(2),\n        'RF': (X1.n_edges + X2.n_edges -2*n_good),\n        'good':n_good,\n        'L':X1.n_edges,\n        'R':X2.n_edges,\n\n    }\n}\n\nfunction get_intersection_leaves(h1, h2){\n\n    var leaves1 = h1.leaves().map(x => x.data.name);\n    var leaves2 = h2.leaves().map(x => x.data.name);\n    return Array.from(new Set(leaves1.filter(value => leaves2.includes(value))))\n}\n\nfunction r_child(parent,child){\n    let index = parent.children.indexOf(child);\n    if (index > -1) {\n        parent.children.splice(index, 1);\n    }\n}\n\nfunction get_duplicated(array){\n    return array.filter((e, i, a) => a.indexOf(e) !== i)\n}\n\nfunction remove_from_array(array, to_remove){\n\n    return array.filter(element => !to_remove.includes(element));\n\n}\n\nfunction remove_duplicated_and_unnamed_leaves_hierarchy(h){\n\n    var leaf_space = []\n\n    h.eachAfter(d => {\n\n        if (d.parent && !d.children){\n\n            if (d.data.name.length === 0){\n                r_child(d.parent,d)\n                d= null;\n            }\n            else {\n                leaf_space.push(d.data.name)\n            }\n        }\n\n\n    });\n\n    var dup = get_duplicated(leaf_space)\n\n\n    var to_keep = remove_from_array(leaf_space, dup)\n\n    return filter_leaves_hierarchy(h, to_keep)\n}\n\nfunction filter_leaves_hierarchy(h, leaves_to_keep){\n\n\n    h.eachAfter(d => {\n\n        if (d.children && d.parent){\n\n            if (d.children.length === 0){\n                r_child(d.parent, d)\n                d = null\n            }\n\n            else if (d.children.length === 1){\n                r_child(d.parent, d)\n                d.parent.children.push(d.children[0])\n                d.children[0].parent = d.parent\n                d = null\n\n            }\n        }\n\n        else if (d.parent){\n\n            if (!leaves_to_keep.includes(d.data.name)){\n                r_child(d.parent,d)\n                d= null;\n            }\n        }\n\n\n    });\n\n    if (Array.from(new Set(h.leaves().map(x => x.data.name))).length == leaves_to_keep.length){\n        return h\n    }\n\n    return false\n}\n\nfunction check_whole_hierarchy_labelled(hierarchy ){\n\n\n    traverse(hierarchy, function(node,children){\n\n        if (typeof node.data['duplication'] === 'undefined' ){\n            node.data['duplication'] = false\n        }\n\n\n    }, null)\n\n    return\n}\n\nfunction buildX(hierarchy){\n\n/*\n Define the table X  according to (Day 1985) to have contiguous integers for\n each clade, and define a clade by the left-most and right-most identifiers,\n such as [4,7] for the clade [4,5,6,7].\n\n  Note we extend the table to contain the following fields,\n  which will be populated later in the algorithm:\n  3: node defining the clade in T1\n  4: node defining the clade in T2\n  5: size of the island rooted in the clade in T1\n  6: size of the island rooted in the clade in T2\n  7: labels in the island rooted in the clade in T1\n  8: labels in the island rooted in the clade in T2\n\n */\n\n    var X = []\n    var n = hierarchy.leaves().length\n    var tax2id = {}\n    var n2bip = new Map();\n\n    function buildX_r(T){\n        if (T.children == null && T._children == null){\n            // left right id2taxon nodeT1 nodeT2 sizeIsland1 sizeIsland2 labels1 labels2\n            X.push([0,0,T.data.name,0,0,0,0,new Set(),new Set()])\n            i = X.length -1\n            tax2id[T.data.name] = i\n            return [i,i]\n        }\n\n        else{\n            let min_l = n\n            let max_r = 0\n\n            for (var j = 0; j < T.children.length; j++) {\n                var c = T.children[j]\n\n                var [l,r] = buildX_r(c)\n                min_l = Math.min(l,min_l)\n                max_r = Math.max(r,max_r)\n\n            }\n\n            X[min_l][0]=X[max_r][0]=min_l\n            X[min_l][1]=X[max_r][1]=max_r\n            X[min_l][3]=X[max_r][3]=T\n            n2bip.set(T, [min_l,max_r]);\n\n\n            return [min_l,max_r]\n        }\n\n    }\n\n    buildX_r(hierarchy)\n\n    return [X, tax2id, n2bip]\n}\n\nfunction findgood(hierarchy,X,tax2id){\n\n\n    function findgood_r(T){\n\n        if (T.children == null && T._children == null){\n            var i = tax2id[T.data.name]\n\n            return [i,i,1]\n        }\n        else {\n            var min_l = n\n            var max_r=0\n            var tot_w=0\n\n            for (var j = 0; j < T.children.length; j++) {\n\n                var c = T.children[j]\n\n                var [l, r, w] = findgood_r(c)\n\n                min_l = Math.min(l, min_l)\n                max_r = Math.max(r, max_r)\n                tot_w += w\n            }\n\n            if (max_r-min_l+1 == tot_w){\n\n                if (X[min_l][0]==min_l && X[min_l][1]==max_r){\n                    X[min_l][4]= T\n                    n2bip.set(T, [min_l,max_r]);\n                }\n                else if (X[max_r][0]==min_l && X[max_r][1]==max_r) {\n                    X[max_r][4]=T\n                    n2bip.set(T, [min_l,max_r]);\n                }\n            }\n\n            return [min_l,max_r,tot_w]\n\n\n        }\n    }\n\n    var n2bip =  new Map();\n    var n = hierarchy.leaves().length\n\n    findgood_r(hierarchy)\n\n    return(n2bip)\n}\n\nfunction getIslandsDay(t,X,n2bip,isT1){\n\n    /*\n     An island is separated from the rest of the tree\n     by good edges. In the traversal below, we do a preorder\n     traversal and create a new island whenever we meet a clade\n     defined in X\n                         ____\n                        /\n                 **** x6\n                *       \\___\n         **** x3                ......\n        *       \\___    ______x7\n   ----x1              /        ...\n        *       **** x4        ____\n         **** x2       ``--    /\n                *********** x5\n                              \\_____\n\n     */\n\n    function mytraversal(t,parentIslandId=0){\n\n        if (t.children == null && t._children == null){\n            return\n        }\n\n        if (n2bip.has(t)){\n            var [l,r] = n2bip.get(t)\n        }\n        else {\n            var l = 0;\n            var r = 0;\n        }\n\n        var row = -1\n\n        if (X[l][0]===l && X[l][1]===r && X[l][4]!==0){\n            row = l\n        }\n\n        else if (X[r][0]===l && X[r][1]===r && X[r][4]!==0){\n            row = r\n        }\n\n        // CLADE IS COMMON\n        if (row > -1){\n\n            // end of previous island, so new island.\n            islandId = row\n            X[row][off+2].add(t.data.duplication)\n\n\n            for (var j = 0; j < t.children.length; j++) {\n                var c = t.children[j]\n                mytraversal(c,islandId)\n\n            }\n\n        }\n        else {\n            // continue previous island\n            var islandId = parentIslandId\n\n            X[islandId][off+2].add(t.data.duplication)\n            X[islandId][off] += 1\n\n            for (var j = 0; j < t.children.length; j++) {\n                var c = t.children[j]\n\n                mytraversal(c,islandId)\n\n            }\n\n        }\n\n    }\n\n\n    var off;\n\n    if (isT1){\n        off = 5\n    }\n    else{\n        off = 6\n    }\n\n    mytraversal(t)\n\n    return\n\n}\n\n// ADAPTED FROM https://github.com/DessimozLab/pylabeledrf\nfunction  compute_LRF(t1, t2){\n\n    var [ X, tax2id, n12bip ] = buildX(t1)\n\n    var n22bip = findgood(t2,X,tax2id)\n\n    getIslandsDay(t1,X,n12bip,true)\n    getIslandsDay(t2,X,n22bip,false)\n\n\n    var rf = 0;\n    var subs = 0;\n\n    for (var i = 0; i < X.length; i++) {\n\n        if (X[i][4] != 0){\n\n            rf += X[i][5]+X[i][6]\n\n            let intersection = new Set( [...X[i][7]].filter(x => X[i][8].has(x)));\n\n            if (  intersection.size  == 0){\n                subs +=1\n            }\n        }\n    }\n\n    return rf+subs\n\n}\n\nfunction prepare_and_run_distance(m1,m2){\n\n    var distance = {\n        'no_distance_message': true,\n        'clade': false,\n        'Cl_good': false,\n        'Cl_left': false,\n        'Cl_right': false,\n        'RF': false,\n        'RF_good': false,\n        'RF_left': false,\n        'RF_right': false,\n        'Euc': false,\n        'LRF':false\n    }\n\n    // CHECK INTERSECTING LEAVES\n    var h1_raw = d3.hierarchy(m1.data, d => d.children );\n    var h2_raw = d3.hierarchy(m2.data, d => d.children );\n\n    var h1 = remove_duplicated_and_unnamed_leaves_hierarchy(h1_raw)\n    var h2 = remove_duplicated_and_unnamed_leaves_hierarchy(h2_raw)\n\n    var intersection = get_intersection_leaves(h1,h2)\n\n    if (intersection.length == 0){\n        distance.no_distance_message = 'No leaves in common to compute distance.'\n        return  distance\n    }\n\n    // FILTER TREE TO KEEP ONLY INTERSECTING LEAVES\n    var hierachy1 = filter_leaves_hierarchy(h1, intersection )\n    var table1 = build_table(hierachy1 )\n\n    var hierachy2 = filter_leaves_hierarchy(h2, intersection )\n    var table2 = build_table(hierachy2 )\n\n    // CLADISTIC DISTANCE & EUCLIDIAN\n    var r = compute_RF_Euc(table1,table2)\n    distance.clade = r.RF\n    distance.Cl_good = r.good\n    distance.Cl_left = r.L\n    distance.Cl_right = r.R\n    distance.Euc = r.E\n\n    // RF\n    var hierarchy_mockup_rerooted1 = reroot_hierarchy(hierachy1, intersection[0])\n    var hierarchy_mockup_rerooted2 = reroot_hierarchy(hierachy2, intersection[0])\n\n    // build tables\n    var X1 = build_table(hierarchy_mockup_rerooted1)\n    var X2 = build_table(hierarchy_mockup_rerooted2)\n\n    var r2 = compute_RF_Euc(X1,X2)\n    distance.RF = r2.RF\n    distance.RF_good = r2.good\n    distance.RF_left = r2.L\n    distance.RF_right = r2.R\n\n\n    // LRF\n    if ( m1.settings.has_duplications && m2.settings.has_duplications) {\n        check_whole_hierarchy_labelled(hierarchy_mockup_rerooted1)\n        check_whole_hierarchy_labelled(hierarchy_mockup_rerooted2)\n\n        distance.LRF = compute_LRF(hierarchy_mockup_rerooted1, hierarchy_mockup_rerooted2,'duplication' )\n    }\n\n    return  distance\n}\n\nmodule.exports =  {prepare_and_run_distance, build_table, reroot_hierarchy, screen_shot, parse_nhx, save_file_as, compute_RF_Euc, get_intersection_leaves, filter_leaves_hierarchy, remove_duplicated_and_unnamed_leaves_hierarchy};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/utils.js?");
+eval("const fs = __webpack_require__(/*! file-saver */ \"./node_modules/file-saver/dist/FileSaver.min.js\")\nconst d3 = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n\nfunction traverse(o,func_pre, func_post) {\n\n    if (func_pre){\n        func_pre.apply(this,[o,o[\"children\"]])\n    }\n\n    if(o[\"children\"]){\n\n        for (var c in o[\"children\"] ) {\n\n            var child = o[\"children\"][c]\n\n            child = traverse(child, func_pre, func_post)\n\n            if (func_post) {\n                func_post.apply(this,[child,o])\n            }\n\n\n        }\n\n\n    }\n\n    return o\n\n}\n\nfunction build_table(hierarchy){\n\n    traverse(hierarchy, function(node,children){\n        delete node.left_\n        delete node.right_\n        delete node.weight_\n    }, null)\n\n    var n = hierarchy.leaves().length\n    var X = Array.from(new Array(n), _ => Array(3).fill(null));\n    var S2I = {} //Array(n).fill(0)\n    var I2S = Array(n).fill(null)\n    var n_edges = 0\n\n    var nzl = []\n    traverse(hierarchy, null, function(node,children){nzl.push(node)})\n    nzl.push(hierarchy)\n    var nz = nzl.entries()\n\n    var n1 = nz.next()\n    var n2 = nz.next()\n    var i = 0\n\n    while (true) {\n\n        var node = n1.value[1]\n        var node2 = n2.value[1]\n        var p = node.parent\n        var ii;\n\n        // Do work\n        if (!(node.hasOwnProperty('children'))) {\n            I2S[i] = node.data.name\n            S2I[I2S[i]] = i\n            node.weight_ = 0\n            node.left_ = i\n            node.right_ = i\n            i += 1\n        }\n\n        // propagate up\n        if (typeof p != \"undefined\"){\n            p.left_ = p.hasOwnProperty('left_') ? Math.min(p.left_, node.left_) : node.left_\n            p.right_ = p.hasOwnProperty('right_') ? Math.max(p.right_, node.right_) : node.right_\n            if (p.hasOwnProperty('weight_')){ p.weight_ = p.weight_ + node.weight_ + 1} else {p.weight_ = node.weight_  +=1}\n        }\n\n        if (node.hasOwnProperty('children')) {\n\n            if( node2.hasOwnProperty('weight_') && node2.weight_ > 0 ){ii = node.left_} else { ii = node.right_}\n            X[ii][0] = node.left_\n            X[ii][1] = node.right_\n            if (node.data.hasOwnProperty('branch_length')){\n                X[ii][2] = node.data.branch_length\n            }\n            else {\n                X[ii][2] = 1\n            }\n\n\n            n_edges += 1\n\n        }\n\n        n1 = n2\n        n2 = nz.next()\n\n        if (n2.done){\n\n\n            // process seed node, w=0\n            ii = hierarchy.leaves().length-1\n            X[ii][0] = n1.value[1].left_\n            X[ii][1] = n1.value[1].right_\n            X[ii][2] = n1.value[1].data.branch_length\n            n_edges += 1\n\n            break\n        }\n\n    }\n\n\n\n    if (X[0][0] !== null){\n        X[0] = Array(3).fill(null)\n\n    }\n\n    n_edges = 0\n    for (const n2Key in X) {\n        if (X[n2Key][0] !== null){\n            n_edges++\n        }\n\n    }\n\n    var leaf_to_dist = {}\n\n    hierarchy.leaves().forEach( e=> { leaf_to_dist[e.data.name] = e.data.branch_length })\n\n\n    return {'table': X, 'n_edges': n_edges, 'I2S': I2S, 'S2I': S2I, 'leaf_dict': leaf_to_dist}\n\n\n}\n\nfunction reverse_order(child,parent){\n\n    child.children.push(parent)\n    parent.parent =child\n\n    const b = parent.children.indexOf(child);\n    if (b > -1) {\n        parent.children.splice(b, 1);\n    }\n}\n\nfunction reroot_hierarchy(hierarchy, leaf_name){\n\n\n    let leaf = hierarchy.leaves().find(element => element.data.name == leaf_name );\n\n    //  INVERT PATH TO ROOT\n    var ancestors  = leaf.ancestors()\n    leaf.children = []\n    leaf.root = true\n\n\n    //leaf.branch_length_before_reverse = leaf.data.branch_length\n\n/*\n    for (var j = 0; j < leaf.parent.children.length; j++) {\n\n            if (leaf.parent.children[j] != leaf){\n\n                leaf.data.branch_length = leaf.parent.children[j].data.branch_length\n                break\n\n            }\n\n        }\n\n */\n\n\n    var index\n    for (index = 0; index < ancestors.length; index++) {\n\n        let child = (index === 0) ? leaf : ancestors[index-1]\n        let parent = ancestors[index]\n\n\n        /*\n        parent.branch_length_before_reverse = parent.data.branch_length\n        if (child.branch_length_before_reverse){\n            parent.data.branch_length = child.branch_length_before_reverse\n        }\n        else{\n            parent.data.branch_length = child.data.branch_length\n        }\n        */\n\n\n        reverse_order(child,parent)\n    }\n\n    //DESTROY ROOT\n    var old_root_children = ancestors[ancestors.length-1].children\n\n    var c = ancestors[ancestors.length-2].children.indexOf(ancestors[ancestors.length-1]);\n    if (c > -1) {\n        ancestors[ancestors.length-2].children.splice(c, 1);\n    }\n    for (var j = 0; j < old_root_children.length; j++) {\n\n        let parent = old_root_children[j]\n        let child = ancestors[ancestors.length-2]\n\n        child.children.push(parent)\n        parent.parent =child\n    }\n\n    leaf.parent = null\n    leaf.data.branch_length = leaf.children[0].data.branch_length\n\n    return leaf\n}\n\nfunction addLogo(svg) {\n    // TODO load with ajax\n    var logo_xml = '<svg id=\"exportLogo\" x=\"0\" y=\"0\"><g id=\"g4169\"> <path d=\"m 29.606259,23.679171 1.905511,0 c 0.193778,0.617882 0.290669,1.188505 0.290672,1.711869 0.466506,-0.545171 1.022728,-0.99222 1.668668,-1.341146 0.653108,-0.348904 1.295455,-0.523362 1.927043,-0.523373 0.976073,1.1e-5 1.86603,0.261698 2.669869,0.78506 0.810999,0.523383 1.442581,1.221215 1.894747,2.093495 0.459321,0.865028 0.688986,1.802739 0.688998,2.813134 -1.2e-5,1.010407 -0.229677,1.951752 -0.688998,2.824038 -0.452166,0.865023 -1.083748,1.559219 -1.894747,2.082592 -0.803839,0.516105 -1.693796,0.774156 -2.669869,0.774157 -0.638765,-1e-6 -1.284701,-0.163554 -1.937809,-0.490663 -0.653117,-0.334377 -1.20575,-0.770521 -1.657902,-1.308434 l 0,6.542172 -1.711731,0 0,-12.713622 c -2e-6,-0.552441 -0.04665,-1.170313 -0.139953,-1.853616 -0.08613,-0.683283 -0.20096,-1.148504 -0.344499,-1.395663 m 2.196183,5.539039 c -3e-6,1.133981 0.355261,2.093499 1.065795,2.878557 0.717702,0.777793 1.561006,1.166688 2.529916,1.166687 0.954543,10e-7 1.79067,-0.392528 2.508385,-1.177592 0.717697,-0.785056 1.07655,-1.740939 1.076561,-2.867652 -1.1e-5,-1.1267 -0.358864,-2.082583 -1.076561,-2.867652 -0.717715,-0.79232 -1.553842,-1.188485 -2.508385,-1.188495 -0.96891,10e-6 -1.812214,0.396175 -2.529916,1.188495 -0.710534,0.785069 -1.065798,1.740952 -1.065795,2.867652\" 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style=\"fill:#939598\" id=\"polygon461\" points=\"5.7,0.23 11.86,0.23 11.86,1.65 7.12,1.65 7.12,6.04 11.86,6.04 11.86,7.46 11.86,7.46 5.7,7.46 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon463\" points=\"0,7.08 3.51,7.08 3.51,8.49 1.43,8.49 1.45,15.84 12.68,15.84 12.68,17.26 12.68,17.26 0.04,17.26 \" class=\"cls-2\" /> <polygon style=\"fill:#939598\" id=\"polygon465\" points=\"10.49,11.02 10.49,12.44 10.49,12.44 2.84,12.44 2.84,7.79 4.26,7.79 4.26,11.02 \" class=\"cls-2\" transform=\"translate(0,-0.15225398)\" /> <polygon style=\"fill:#bcbec0\" id=\"polygon467\" points=\"4.26,4.55 4.26,7.79 4.26,7.79 2.84,7.79 2.84,3.13 6.41,3.13 6.41,4.55 \" class=\"cls-3\" transform=\"matrix(1,0,0,0.85463687,0,0.4549866)\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-3\" width=\"1.4240631\" height=\"1.7319686\" x=\"2.8396611\" y=\"7.0799503\" /> <rect style=\"fill:#939598;fill-opacity:1\" id=\"rect3926-6\" width=\"1.3864813\" height=\"1.6934805\" x=\"5.7012329\" y=\"2.9206221\" /> </g> <g id=\"g4005\"> <g id=\"g3984\"> <polygon class=\"cls-2\" points=\"94.93,12.33 94.93,10.91 99.87,10.91 99.87,6.46 94.93,6.46 94.93,5.04 101.29,5.04 101.29,12.33 101.29,12.33 \" id=\"polygon453\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"94.72,17.36 94.72,15.94 104.87,15.94 104.9,5.41 102.74,5.41 102.74,3.99 106.32,3.99 106.29,17.36 106.29,17.36 \" id=\"polygon455\" style=\"fill:#939598\" /> <polygon class=\"cls-2\" points=\"95.51,1.42 95.51,0 103.45,0 103.45,4.7 103.45,4.7 102.03,4.7 102.03,1.42 \" id=\"polygon457\" style=\"fill:#939598\" /> <polygon class=\"cls-3\" points=\"102.03,7.97 102.03,4.7 103.45,4.7 103.45,9.39 103.45,9.39 100.65,9.39 100.65,7.97 \" id=\"polygon459\" style=\"fill:#bcbec0\" /> <rect y=\"3.9876499\" x=\"102.02941\" height=\"1.4238259\" width=\"1.4579451\" id=\"rect3926\" style=\"fill:#939598;fill-opacity:1\" /> <rect y=\"7.884686\" x=\"99.887817\" height=\"1.6934805\" width=\"1.397205\" id=\"rect3926-7\" style=\"fill:#939598;fill-opacity:1\" /> </g> </g> </g> </g> </svg>';\n\n    svg.append(\"g\").html(logo_xml);\n\n}\n\nfunction getSVGString( svgNode ) {\n    svgNode.setAttribute('xlink', 'http://www.w3.org/1999/xlink');\n    var cssStyleText = getCSSStyles(svgNode);\n    cssStyleText += \"* {font-family:Helvetica}\"\n    appendCSS( cssStyleText, svgNode );\n\n    var serializer = new XMLSerializer();\n    var svgString = serializer.serializeToString(svgNode);\n    svgString = svgString.replace(/(\\w+)?:?xlink=/g, 'xmlns:xlink='); // Fix root xlink without namespace\n    svgString = svgString.replace(/NS\\d+:href/g, 'xlink:href'); // Safari NS namespace fix\n\n    return svgString;\n\n    function getCSSStyles( parentElement ) {\n        var selectorTextArr = [];\n\n        // Add Parent element Id and Classes to the list\n        selectorTextArr.push( '#'+parentElement.id );\n        for (var c = 0; c < parentElement.classList.length; c++)\n            if ( !contains('.'+parentElement.classList[c], selectorTextArr) )\n                selectorTextArr.push( '.'+parentElement.classList[c] );\n\n        // Add Children element Ids and Classes to the list\n        var nodes = parentElement.getElementsByTagName(\"*\");\n        for (var i = 0; i < nodes.length; i++) {\n            var id = nodes[i].id;\n            if ( !contains('#'+id, selectorTextArr) )\n                selectorTextArr.push( '#'+id );\n\n            var classes = nodes[i].classList;\n            for (var c = 0; c < classes.length; c++)\n                if ( !contains('.'+classes[c], selectorTextArr) )\n                    selectorTextArr.push( '.'+classes[c] );\n        }\n\n        // Extract CSS Rules\n        var extractedCSSText = \"\";\n        for (var i = 0; i < document.styleSheets.length; i++) {\n            var s = document.styleSheets[i];\n\n            try {\n                if(!s.cssRules) continue;\n            } catch( e ) {\n                if(e.name !== 'SecurityError') throw e; // for Firefox\n                continue;\n            }\n\n            var cssRules = s.cssRules;\n            for (var r = 0; r < cssRules.length; r++) {\n                if ( contains( cssRules[r].selectorText, selectorTextArr ) )\n                    extractedCSSText += cssRules[r].cssText;\n            }\n        }\n\n\n        return extractedCSSText;\n\n        function contains(str,arr) {\n            return arr.indexOf( str ) === -1 ? false : true;\n        }\n\n    }\n\n    function appendCSS( cssText, element ) {\n        var styleElement = document.createElement(\"style\");\n        styleElement.setAttribute(\"type\",\"text/css\");\n        styleElement.innerHTML = cssText;\n        var refNode = element.hasChildNodes() ? element.children[0] : null;\n        element.insertBefore( styleElement, refNode );\n    }\n}\n\nfunction svgString2Image( svgString, width, height, format, callback ) {\n    var format = format ? format : 'png';\n\n    var imgsrc = 'data:image/svg+xml;base64,'+ btoa( unescape( encodeURIComponent( svgString ) ) ); // Convert SVG string to dataurl\n\n    var canvas = document.createElement(\"canvas\");\n    var context = canvas.getContext(\"2d\");\n\n    canvas.width = width;\n    canvas.height = height;\n\n    var image = new Image;\n    image.onload = function() {\n\n        context.clearRect ( 0, 0, width, height );\n        context.fillStyle = \"#ffffff\";\n        context.fillRect(0, 0, width, height);\n        context.drawImage(image, 0, 0, width, height);\n\n        canvas.toBlob( function(blob) {\n            var filesize = Math.round( blob.length/1024 ) + ' KB';\n            if ( callback ) callback( blob, filesize );\n        });\n    };\n    image.src = imgsrc;\n}\n\nfunction screen_shot({ svg1, svg2, format } = {}){\n\n    addLogo(svg1);\n    var name1 = svg1.attr(\"id\");\n    var svgString1 = getSVGString(svg1.node());\n\n    var t = \"<svg xmlns=\\\"http://www.w3.org/2000/svg\\\" version=\\\"1.1\\\">\\n\" +\n        \"\\n\" +\n        \"  <g transform=\\\"translate(0,0)\\\">\\n\" +\n        svgString1 +\n        \"  </g>\\n\"\n\n    if(svg2){\n\n        addLogo(svg2);\n        var name2 = svg2.attr(\"id\");\n        var svgString2 = getSVGString(svg2.node());\n\n        var w = svg2.node().getBoundingClientRect().width\n        var h = svg2.node().getBoundingClientRect().height\n\n        t += '<line x1=\"' + (w + 5) +'\" y1=\"0\" x2=\"' + (w + 5) +'\" y2=\"' + h+'\" stroke=\"black\" />'\n\n        t += \"  <g transform=\\\"translate(\" + (w + 10)  +\",0)\\\">\\n\" +\n            svgString2 +\n            \"  </g>\\n\"\n\n    }\n\n    t += \"</svg> \"\n\n    if(format === 'svg') {\n\n        var blob = new Blob([t], {\"type\": \"image/svg+xml;base64,\"+ btoa(t)});\n        fs.saveAs(blob, name1+\".svg\");\n        svg1.select(\"#exportLogo\").remove();\n        if(svg2){svg2.select(\"#exportLogo\").remove();}\n\n    }\n\n    else if (format === 'png'){\n\n\n\n        var wi = svg1.node().getBoundingClientRect().width\n        var he = svg1.node().getBoundingClientRect().height\n\n        if(svg2){\n            wi = wi*2;\n        }\n\n        svgString2Image(t,  wi, he, 'png', save);\n\n        svg1.select(\"#exportLogo\").remove();\n        if(svg2){svg2.select(\"#exportLogo\").remove();}\n\n        function save(dataBlob, filesize) {\n            var filename = (name) ? name+\".\" : \"\";\n            fs.saveAs(dataBlob, filename+'phylo.io.png'); // FileSaver.js function\n        }\n\n    }\n}\n\n//Adapted from Extended Newick format parser in JavaScript.\n//Copyright (c) Miguel Pignatelli 2014 based on Jason Davies\nfunction parse_nhx(s) {\n    var ancestors = [];\n    var tree = {'data_nhx' : {}};\n    // var tokens = s.split(/\\s*(;|\\(|\\)|,|:)\\s*/);\n    //[&&NHX:D=N:G=ENSG00000139618:T=9606]\n    var tokens = s.split( /\\s*(;|\\(|\\)|\\[|\\]|,|:|=)\\s*/ );\n    for (var i=0; i<tokens.length; i++) {\n        var token = tokens[i];\n        switch (token) {\n            case '(': // new children\n                var subtree = {'data_nhx' : {}};\n                tree.children = [subtree];\n                ancestors.push(tree);\n                tree = subtree;\n                break;\n            case ',': // another branch\n                var subtree = {'data_nhx' : {}};\n                ancestors[ancestors.length-1].children.push(subtree);\n                tree = subtree;\n                break;\n            case ')': // optional name next\n                tree = ancestors.pop();\n                break;\n            case ':': // optional length next\n                break;\n            default:\n                var x = tokens[i-1];\n                // var x2 = tokens[i-2];\n                if (x == ')' || x == '(' || x == ',') {\n                    tree.name = token;\n                }\n                else if (x == ':') {\n                    var test_type = typeof token;\n                    if(!isNaN(token)){\n                        tree.branch_length = parseFloat(token);\n                    }\n                    // tree.length = parseFloat(token);\n                }\n                else if (x == '='){\n                    tree['data_nhx'][tokens[i-2]] = token\n                }\n                else {\n                    var test;\n                }\n        }\n    }\n    return tree;\n};\n\nfunction save_file_as(filename, data) {\n    const blob = new Blob([data], {type: 'text/csv'});\n    if(window.navigator.msSaveOrOpenBlob) {\n        window.navigator.msSaveBlob(blob, filename);\n    }\n    else{\n        const elem = window.document.createElement('a');\n        elem.href = window.URL.createObjectURL(blob);\n        elem.download = filename;\n        document.body.appendChild(elem);\n        elem.click();\n        document.body.removeChild(elem);\n    }\n}\n\nfunction compute_RF_Euc(X1,X2){\n\n    var n_good  = 0\n    var euclidian = 0.00\n\n    var x2_processed = []\n\n    for (var i = 0; i < X1.table.length; i++) {\n        var s1 = X1.table[i][0]\n        var e1 = X1.table[i][1]\n        var w1 = Math.abs(e1-s1)\n\n        if (w1 > 0){\n\n            var species =  X1.I2S.slice(s1,e1+1)\n            var index = []\n\n            for (const [name, idx] of Object.entries(X2.S2I)) {\n                if (species.includes(name)) {index.push(idx)}\n            }\n\n            if (index.length <= 0) {\n                continue\n            }\n\n            var s2 = Math.min.apply(null,index)\n            var e2 = Math.max.apply(null,index)\n            var w2 = Math.abs(e2-s2)\n\n            if (w1 == w2) {\n\n\n                if (X2.table[e2][0] == s2 && X2.table[e2][1] == e2) {\n                    n_good += 1\n                    euclidian += Math.abs(parseFloat(X1.table[i][2]) - parseFloat(X2.table[e2][2]) )\n                    x2_processed.push(e2)\n                }\n                else if (X2.table[s2][0] == s2 && X2.table[s2][1] == e2){\n\n                    n_good += 1\n                    euclidian += Math.abs(parseFloat(X1.table[i][2]) - parseFloat(X2.table[s2][2]) )\n                    x2_processed.push(s2)\n\n                }\n                else{\n                    euclidian += parseFloat(X1.table[i][2])\n\n                }\n\n            }\n\n\n            else{\n                euclidian += parseFloat(X1.table[i][2])\n            }\n\n\n\n\n\n\n        }\n\n    }\n\n\n    for (var k = 1; k < X2.table.length; k++) {\n        if (!x2_processed.includes(k)){\n\n            var d = parseFloat(X2.table[k][2])\n\n            if(!isNaN(d)) {\n                euclidian += d\n                x2_processed.push(k)\n            }\n\n        }\n    }\n\n    var leaf_dist = 0.00\n    for (var key of Object.keys(X1.leaf_dict)) {\n\n        leaf_dist += Math.abs(X1.leaf_dict[key] - X2.leaf_dict[key])\n    }\n\n    var euc = euclidian + leaf_dist\n\n\n    return {\n        'E':euc.toFixed(2),\n        'RF': (X1.n_edges + X2.n_edges -2*n_good),\n        'good':n_good,\n        'L':X1.n_edges,\n        'R':X2.n_edges,\n\n    }\n}\n\nfunction get_intersection_leaves(h1, h2){\n\n    var leaves1 = h1.leaves().map(x => x.data.name);\n    var leaves2 = h2.leaves().map(x => x.data.name);\n    return Array.from(new Set(leaves1.filter(value => leaves2.includes(value))))\n}\n\nfunction r_child(parent,child){\n    let index = parent.children.indexOf(child);\n    if (index > -1) {\n        parent.children.splice(index, 1);\n    }\n}\n\nfunction get_duplicated(array){\n    return array.filter((e, i, a) => a.indexOf(e) !== i)\n}\n\nfunction remove_from_array(array, to_remove){\n\n    return array.filter(element => !to_remove.includes(element));\n\n}\n\nfunction remove_duplicated_and_unnamed_leaves_hierarchy(h){\n\n    var leaf_space = []\n\n    h.eachAfter(d => {\n\n        if (d.parent && !d.children){\n\n            if (d.data.name.length === 0){\n                r_child(d.parent,d)\n                d= null;\n            }\n            else {\n                leaf_space.push(d.data.name)\n            }\n        }\n\n\n    });\n\n    var dup = get_duplicated(leaf_space)\n\n\n    var to_keep = remove_from_array(leaf_space, dup)\n\n    return filter_leaves_hierarchy(h, to_keep)\n}\n\nfunction filter_leaves_hierarchy(h, leaves_to_keep){\n\n\n    h.eachAfter(d => {\n\n        if (d.children && d.parent){\n\n            if (d.children.length === 0){\n                r_child(d.parent, d)\n                d = null\n            }\n\n            else if (d.children.length === 1){\n                r_child(d.parent, d)\n                d.parent.children.push(d.children[0])\n                d.children[0].parent = d.parent\n                d = null\n\n            }\n        }\n\n        else if (d.parent){\n\n            if (!leaves_to_keep.includes(d.data.name)){\n                r_child(d.parent,d)\n                d= null;\n            }\n        }\n\n\n    });\n\n    if (Array.from(new Set(h.leaves().map(x => x.data.name))).length == leaves_to_keep.length){\n        return h\n    }\n\n    return false\n}\n\nfunction check_whole_hierarchy_labelled(hierarchy ){\n\n\n    traverse(hierarchy, function(node,children){\n\n        if (typeof node.data['duplication'] === 'undefined' ){\n            node.data['duplication'] = false\n        }\n\n\n    }, null)\n\n    return\n}\n\nfunction buildX(hierarchy){\n\n/*\n Define the table X  according to (Day 1985) to have contiguous integers for\n each clade, and define a clade by the left-most and right-most identifiers,\n such as [4,7] for the clade [4,5,6,7].\n\n  Note we extend the table to contain the following fields,\n  which will be populated later in the algorithm:\n  3: node defining the clade in T1\n  4: node defining the clade in T2\n  5: size of the island rooted in the clade in T1\n  6: size of the island rooted in the clade in T2\n  7: labels in the island rooted in the clade in T1\n  8: labels in the island rooted in the clade in T2\n\n */\n\n    var X = []\n    var n = hierarchy.leaves().length\n    var tax2id = {}\n    var n2bip = new Map();\n\n    function buildX_r(T){\n        if (T.children == null && T._children == null){\n            // left right id2taxon nodeT1 nodeT2 sizeIsland1 sizeIsland2 labels1 labels2\n            X.push([0,0,T.data.name,0,0,0,0,new Set(),new Set()])\n            i = X.length -1\n            tax2id[T.data.name] = i\n            return [i,i]\n        }\n\n        else{\n            let min_l = n\n            let max_r = 0\n\n            for (var j = 0; j < T.children.length; j++) {\n                var c = T.children[j]\n\n                var [l,r] = buildX_r(c)\n                min_l = Math.min(l,min_l)\n                max_r = Math.max(r,max_r)\n\n            }\n\n            X[min_l][0]=X[max_r][0]=min_l\n            X[min_l][1]=X[max_r][1]=max_r\n            X[min_l][3]=X[max_r][3]=T\n            n2bip.set(T, [min_l,max_r]);\n\n\n            return [min_l,max_r]\n        }\n\n    }\n\n    buildX_r(hierarchy)\n\n    return [X, tax2id, n2bip]\n}\n\nfunction findgood(hierarchy,X,tax2id){\n\n\n    function findgood_r(T){\n\n        if (T.children == null && T._children == null){\n            var i = tax2id[T.data.name]\n\n            return [i,i,1]\n        }\n        else {\n            var min_l = n\n            var max_r=0\n            var tot_w=0\n\n            for (var j = 0; j < T.children.length; j++) {\n\n                var c = T.children[j]\n\n                var [l, r, w] = findgood_r(c)\n\n                min_l = Math.min(l, min_l)\n                max_r = Math.max(r, max_r)\n                tot_w += w\n            }\n\n            if (max_r-min_l+1 == tot_w){\n\n                if (X[min_l][0]==min_l && X[min_l][1]==max_r){\n                    X[min_l][4]= T\n                    n2bip.set(T, [min_l,max_r]);\n                }\n                else if (X[max_r][0]==min_l && X[max_r][1]==max_r) {\n                    X[max_r][4]=T\n                    n2bip.set(T, [min_l,max_r]);\n                }\n            }\n\n            return [min_l,max_r,tot_w]\n\n\n        }\n    }\n\n    var n2bip =  new Map();\n    var n = hierarchy.leaves().length\n\n    findgood_r(hierarchy)\n\n    return(n2bip)\n}\n\nfunction getIslandsDay(t,X,n2bip,isT1){\n\n    /*\n     An island is separated from the rest of the tree\n     by good edges. In the traversal below, we do a preorder\n     traversal and create a new island whenever we meet a clade\n     defined in X\n                         ____\n                        /\n                 **** x6\n                *       \\___\n         **** x3                ......\n        *       \\___    ______x7\n   ----x1              /        ...\n        *       **** x4        ____\n         **** x2       ``--    /\n                *********** x5\n                              \\_____\n\n     */\n\n    function mytraversal(t,parentIslandId=0){\n\n        if (t.children == null && t._children == null){\n            return\n        }\n\n        if (n2bip.has(t)){\n            var [l,r] = n2bip.get(t)\n        }\n        else {\n            var l = 0;\n            var r = 0;\n        }\n\n        var row = -1\n\n        if (X[l][0]===l && X[l][1]===r && X[l][4]!==0){\n            row = l\n        }\n\n        else if (X[r][0]===l && X[r][1]===r && X[r][4]!==0){\n            row = r\n        }\n\n        // CLADE IS COMMON\n        if (row > -1){\n\n            // end of previous island, so new island.\n            islandId = row\n            X[row][off+2].add(t.data.duplication)\n\n\n            for (var j = 0; j < t.children.length; j++) {\n                var c = t.children[j]\n                mytraversal(c,islandId)\n\n            }\n\n        }\n        else {\n            // continue previous island\n            var islandId = parentIslandId\n\n            X[islandId][off+2].add(t.data.duplication)\n            X[islandId][off] += 1\n\n            for (var j = 0; j < t.children.length; j++) {\n                var c = t.children[j]\n\n                mytraversal(c,islandId)\n\n            }\n\n        }\n\n    }\n\n\n    var off;\n\n    if (isT1){\n        off = 5\n    }\n    else{\n        off = 6\n    }\n\n    mytraversal(t)\n\n    return\n\n}\n\n// ADAPTED FROM https://github.com/DessimozLab/pylabeledrf\nfunction  compute_LRF(t1, t2){\n\n    var [ X, tax2id, n12bip ] = buildX(t1)\n\n    var n22bip = findgood(t2,X,tax2id)\n\n    getIslandsDay(t1,X,n12bip,true)\n    getIslandsDay(t2,X,n22bip,false)\n\n\n    var rf = 0;\n    var subs = 0;\n\n    for (var i = 0; i < X.length; i++) {\n\n        if (X[i][4] != 0){\n\n            rf += X[i][5]+X[i][6]\n\n            let intersection = new Set( [...X[i][7]].filter(x => X[i][8].has(x)));\n\n            if (  intersection.size  == 0){\n                subs +=1\n            }\n        }\n    }\n\n    return rf+subs\n\n}\n\nfunction prepare_and_run_distance(m1,m2){\n\n    var distance = {\n        'no_distance_message': true,\n        'clade': false,\n        'Cl_good': false,\n        'Cl_left': false,\n        'Cl_right': false,\n        'RF': false,\n        'RF_good': false,\n        'RF_left': false,\n        'RF_right': false,\n        'Euc': false,\n        'LRF':false\n    }\n\n    // CHECK INTERSECTING LEAVES\n    var h1_raw = d3.hierarchy(m1.data, d => d.children );\n    var h2_raw = d3.hierarchy(m2.data, d => d.children );\n\n    var h1 = remove_duplicated_and_unnamed_leaves_hierarchy(h1_raw)\n    var h2 = remove_duplicated_and_unnamed_leaves_hierarchy(h2_raw)\n\n    var intersection = get_intersection_leaves(h1,h2)\n\n    if (intersection.length == 0){\n        distance.no_distance_message = 'No leaves in common to compute distance.'\n        return  distance\n    }\n\n    // FILTER TREE TO KEEP ONLY INTERSECTING LEAVES\n    var hierachy1 = filter_leaves_hierarchy(h1, intersection )\n    var table1 = build_table(hierachy1 )\n\n    var hierachy2 = filter_leaves_hierarchy(h2, intersection )\n    var table2 = build_table(hierachy2 )\n\n    // CLADISTIC DISTANCE & EUCLIDIAN\n    var r = compute_RF_Euc(table1,table2)\n    distance.clade = r.RF\n    distance.Cl_good = r.good\n    distance.Cl_left = r.L\n    distance.Cl_right = r.R\n    distance.Euc = r.E\n\n    // RF\n    var hierarchy_mockup_rerooted1 = reroot_hierarchy(hierachy1, intersection[0])\n    var hierarchy_mockup_rerooted2 = reroot_hierarchy(hierachy2, intersection[0])\n\n    // build tables\n    var X1 = build_table(hierarchy_mockup_rerooted1)\n    var X2 = build_table(hierarchy_mockup_rerooted2)\n\n    var r2 = compute_RF_Euc(X1,X2)\n    distance.RF = r2.RF\n    distance.RF_good = r2.good\n    distance.RF_left = r2.L\n    distance.RF_right = r2.R\n\n\n    // LRF\n    if ( m1.settings.has_duplications && m2.settings.has_duplications) {\n        check_whole_hierarchy_labelled(hierarchy_mockup_rerooted1)\n        check_whole_hierarchy_labelled(hierarchy_mockup_rerooted2)\n\n        distance.LRF = compute_LRF(hierarchy_mockup_rerooted1, hierarchy_mockup_rerooted2,'duplication' )\n    }\n\n    return  distance\n}\n\nfunction check_if_color(query){\n    var accepted_spelling = ['color', 'colour'];\n\n    if (accepted_spelling.includes(query.toLowerCase())){\n        return true;\n    }\n    else {\n        return false;\n    }\n}\n\nfunction hexToRgb(hex) {\n    const bigint = parseInt(hex.slice(1), 16);\n    const r = (bigint >> 16) & 255;\n    const g = (bigint >> 8) & 255;\n    const b = bigint & 255;\n    return { r, g, b };\n}\n\nfunction colorDifference(hex1, hex2) {\n    const color1 = hexToRgb(hex1);\n    const color2 = hexToRgb(hex2);\n    const rDiff = color1.r - color2.r;\n    const gDiff = color1.g - color2.g;\n    const bDiff = color1.b - color2.b;\n    const distance = Math.sqrt(rDiff * rDiff + gDiff * gDiff + bDiff * bDiff);\n    const maxDistance = Math.sqrt(255 * 255 * 3);\n    return (distance / maxDistance) * 100;\n}\n\nmodule.exports =  {colorDifference, check_if_color, prepare_and_run_distance, build_table, reroot_hierarchy, screen_shot, parse_nhx, save_file_as, compute_RF_Euc, get_intersection_leaves, filter_leaves_hierarchy, remove_duplicated_and_unnamed_leaves_hierarchy};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/utils.js?");
 
 /***/ }),
 
@@ -8757,7 +8655,7 @@ eval("const fs = __webpack_require__(/*! file-saver */ \"./node_modules/file-sav
 /***/ ((__unused_webpack_module, __webpack_exports__, __webpack_require__) => {
 
 "use strict";
-eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Viewer)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var _interface_js__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./interface.js */ \"./src/interface.js\");\n/* harmony import */ var d3_v6_tip__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! d3-v6-tip */ \"./node_modules/d3-v6-tip/build/d3-v6-tip.js\");\n/* harmony import */ var d3_v6_tip__WEBPACK_IMPORTED_MODULE_2___default = /*#__PURE__*/__webpack_require__.n(d3_v6_tip__WEBPACK_IMPORTED_MODULE_2__);\n\n\n\n\nd3__WEBPACK_IMPORTED_MODULE_0__.selection.prototype.moveToFront = function() {\n    return this.each(function() {\n        this.parentNode.appendChild(this);\n    });\n};\n\nvar uid_viewer = 0 // unique id generator is bound to a single Viewer()\nconst collapse_ratio_vertical = 0.2 // how much a triangle is vertically narrow\n\n// D3 viewer that render any model tree\nclass Viewer {\n\n    constructor(container) {\n\n        // General\n        this.container_object = container // related Container()\n        this.uid = uid_viewer ++; // unique viewer() id\n        this.data; // current model.data used\n        this.model = false; // current model\n\n        // D3\n        this.d3 = d3__WEBPACK_IMPORTED_MODULE_0__ // d3.js instance that contain information about zoom, etc..\n        this.hierarchy; // converted model data into d3 comptabile data format\n        this.d3_cluster; // d3 layout to compute 2D position for d3 hierarchy object\n        this.d3_cluster_data; // d3 layout fed with d3 hierarchy data\n        this.zoom;\n        this.id_gen = 0; // unique id generator for d3 id\n        this.max_length;\n        this.scale_branch_length; // scale between branch length and x pos\n\n        // DOM\n        this.svg;\n        this.svg_d3;\n        this.G;\n        this.G_d3;\n        this.container = document.getElementById(this.container_object.div_id);\n        this.container_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.container);\n        this.container_d3.style('font-family', 'monospace !important' )\n\n        this.interface;\n\n        // Settings\n        this.settings = {\n            'duration' : 500,\n            'max_visible_leaves' : 30,\n            'style': {\n                'offset_top_fit': 140,\n                'translate_top_fit': 60,\n                'margin' : {top: 16, right: 16, bottom: 16, left: 96},\n\n            },\n            'stack':{\n                'labels' : [\"Retained\", \"Duplicated\", \"Gained\", \"Lost\", \"Duplications\", \"Gains\", \"Losses\"],\n                'colors' : [\"#1f77b4\", \"#ff7f0e\", \"#2ca02c\", \"#d62728\", \"#ff7f0e\", \"#2ca02c\", \"#d62728\"],\n                'colorMap' : {},\n            }\n\n        }\n\n        this.width = parseFloat(window.getComputedStyle(this.container).width)  -  this.settings.style.margin.left - 2*this.settings.style.margin.right;\n        this.height = parseFloat(window.getComputedStyle(this.container).height) - 2*this.settings.style.margin.top - this.settings.style.margin.bottom;\n\n        this.colorScale = {'leaf' : null, 'node':null}\n        this.intercolor = {'leaf' : null, 'node': null}\n        this.set_color_scale()\n\n        // ZOOM\n        this.force_zoom_rescaling = false\n        this.zoom = d3__WEBPACK_IMPORTED_MODULE_0__.zoom().on(\"zoom\", (d, i) =>  { return this.zoomed(d,i)} )\n\n\n        // SVG\n        this.svg = this.container_d3.append(\"svg\")\n            .attr(\"id\", \"svg\" + this.uid)\n            .attr(\"width\", this.width + this.settings.style.margin.left + this.settings.style.margin.right )\n            .attr(\"height\", this.height + this.settings.style.margin.top + this.settings.style.margin.bottom)\n            .call(this.zoom)\n            .on(\"dblclick.zoom\", null)\n            .call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(this.settings.style.margin.left,  (this.height/2 +  this.settings.style.margin.top) ))\n\n\n        this.svg_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.svg)\n\n        // G element for zoom/transform\n        //this.G = this.svg.append(\"g\")\n        //    .attr(\"id\", \"master_g\" + this.uid)\n        //    .attr(\"transform\", \"translate(\"+ this.settings.style.margin.left + \",\" + (this.height/2 +  this.settings.style.margin.top) + \")\")\n        //this.G_d3 = d3.select(this.G);\n\n        this.build_master_g()\n\n        // D3 TREE LAYOUT\n        this.d3_cluster = d3__WEBPACK_IMPORTED_MODULE_0__.cluster()\n            .separation((a,b) =>  {return this.separate(a,b)})\n\n        // MISC.\n        this.settings.stack.colorMap = this.compute_color_map_stack()\n\n\n\n    }\n\n    // DATA\n    set_data(model, refresh_interface = true){\n\n\n        this.data = model.data;\n        this.model = model;\n\n        this.d3_cluster.nodeSize([this.model.settings.tree.node_vertical_size,this.model.settings.tree.node_horizontal_size])\n\n        this.build_d3_data();\n\n        this.set_color_scale()\n\n        if (refresh_interface){\n            this.interface = new _interface_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](this, this.container_object)\n        }\n\n\n    }\n\n    remove_data(){\n\n        this.data = null;\n        this.model = null;\n        this.destroy_master_g()\n        this.build_master_g()\n\n    }\n\n    destroy_master_g(){\n        this.svg.select(\"#master_g\" + this.uid).remove()\n        this.G = null\n        this.G_d3 = null\n    }\n\n    build_master_g(){\n        this.G = this.svg.append(\"g\")\n            .attr(\"id\", \"master_g\" + this.uid)\n            .attr(\"transform\", \"translate(\"+ this.settings.style.margin.left + \",\" + (this.height/2 +  this.settings.style.margin.top) + \")\")\n        this.G_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.G);\n\n\n    }\n\n    build_d3_data(){\n\n        // Build d3 hierarchy\n        this.hierarchy = d3__WEBPACK_IMPORTED_MODULE_0__.hierarchy(this.data, d => d.children );\n        this.hierarchy.x0 = this.height / 2;\n        this.hierarchy.y0 = 0;\n\n        // Transfer \"collapse\" information from model data to d3 data\n        this.hierarchy.each(d => {\n\n            d.ID = null;\n\n            if (d.data.collapse) {\n                d._children = d.children;\n                d.children = null;\n            }\n            else {\n                d._children = null;\n            }\n        })\n\n        this.build_d3_cluster()\n\n\n\n    }\n\n    build_d3_cluster(){\n\n        // Build d3 layout\n        this.d3_cluster_data = this.d3_cluster(this.hierarchy);\n\n        // compute the branch length from the root till each nodes (d.branch_size)\n        this.max_length = 0\n        this.max_depth = 0\n        this.hierarchy.eachBefore(d => {\n            if (d.parent) {\n                d.branch_size = d.parent.branch_size + d.data.branch_length\n                if (d.branch_size > this.max_length) {\n                    this.max_length = d.branch_size\n                }\n                if (d.depth > this.max_depth) {\n                    this.max_depth = d.depth\n                }\n\n            } else {\n                d.branch_size = 0\n            }\n        })\n\n        this.compute_stack_data()\n\n        this.build_scale_branch_length() // todo dont build scale on collapse\n\n        //this.interface = new Interface(this, this.container_object)\n\n\n\n    }\n\n    compute_stack_data(){\n        // store required data for stack on node\n        if (this.model.settings.has_histogram_data){\n            this.hierarchy.eachBefore((d, i, node) => {\n\n                if( d.data.evolutionaryEvents) {\n\n                    let stackData = []\n                    stackData['genes'] = this.barStack(d, 'genes');\n                    stackData['events'] = this.barStack(d, 'events');\n\n                    d.stackData = stackData\n                }\n\n                if( this.model.settings.stack.has_support &&d.data.evolutionaryEvents_support) {\n\n                    let stackData_support = []\n                    stackData_support['genes'] = this.barStack(d, 'genes', true);\n                    stackData_support['events'] = this.barStack(d, 'events', true);\n\n                    d.stackData_support = stackData_support\n                }\n\n            })\n        }\n    }\n\n    build_scale_branch_length(){\n\n        var max_y = 0;\n        this.d3_cluster_data.descendants().forEach(d => {\n            if (d.y > max_y) {\n                max_y = d.y\n            }\n        })\n\n\n\n\n        this.scale_branch_length = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear().domain([0, this.max_length]).range([this.d3_cluster_data.y, max_y])\n        this.scale_branch_depth = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear().domain([0, this.max_depth]).range([this.d3_cluster_data.y, max_y])\n    }\n\n    // RENDERING\n    render(source){\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\"#menu-node\").remove()\n\n\n        this.render_tooltip()\n\n        // Get the nodes and edges\n        this.nodes = this.d3_cluster_data.descendants();\n        this.nodes = this.nodes.sort((a,b) => {return a.x - b.x})\n\n        this.links = this.d3_cluster_data.descendants().slice(1);\n\n\n        // And render them\n        this.render_nodes(source)\n        this.render_edges(source)\n\n\n        if (this.model.settings.first_time_render) {\n            this.model.settings.first_time_render = false\n\n            if (this.container_object.api.settings.phylostratigraphy){\n\n\n                source.children.forEach(element =>\n                    this.container_object.trigger_(\"collapseAll\", element.data, element));\n\n                this.maximise_zoom()\n                this.svg.call(this.zoom.scaleBy, 0.5)\n                this.container_object.history_actions = []\n\n            }\n\n            else{\n                this.fit_to_viewer_height()\n\n            }\n\n        }\n\n\n    }\n\n    render_tooltip(){\n\n        var idd = \"tooltip\" + this.uid\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\".tooltip\").remove()\n\n        this.tooltip = this.d3.select('body').append(\"div\")\n            .style(\"opacity\", 0)\n            .style(\"position\", 'absolute')\n            .attr(\"class\", \"tooltip\")\n            .attr(\"id\", idd)\n            .style(\"background-color\", \"white\")\n            .style(\"border\", \"solid\")\n            .style(\"border-width\", \"1px\")\n            .style(\"border-radius\", \"5px\")\n            .style(\"padding\", \"10px\")\n\n\n    }\n\n    set_tooltip_text(node){\n\n        var html = \"\";\n\n        if (this.container_object.api.settings.phylostratigraphy){\n\n            if (this.model.settings.stack.has_support && this.model.settings.stack.only_support){\n                var datum = node.data.evolutionaryEvents_support\n            }\n            else {\n                var datum = node.data.evolutionaryEvents\n            }\n\n\n\n            html += `<b># Events</b> <br>`\n            html += `Gains: ${datum.gained} <br>`\n            html += `Duplications: ${datum.duplications} <br>`\n            html += `Losses: ${datum.lost} <br> <br>`\n\n            html += `<b># Genes</b> <br>`\n            html += `Gained: ${datum.gained} <br>`\n            html += `Duplicated: ${datum.duplicated} <br>`\n            html += `Retained: ${datum.retained} <br>`\n            html += `Lost: ${datum.lost} <br>`\n        }\n\n        else {\n            for (var [key, value] of Object.entries(node.data.extended_informations)) {\n\n                if  ((/^-?[\\d]*(\\.[\\d]+)?$/g).test(value)) {\n\n                    if (value % 1 === 0) {\n                        html += `${key}: ${value} <br>`\n                    }\n\n                    else{\n                        //console.log(value)\n                        html += `${key}: ${parseFloat(value).toFixed(3)} <br>`\n                    }\n                }\n                else{\n                    html += `${key}: ${value} <br>`\n                }\n\n\n            }\n        }\n\n        if (this.container_object.api.settings.phylostratigraphy) {\n            html += `<br> <b>Click to open detail page</b>  <br>`\n        }\n\n        this.tooltip.html(html);\n    }\n\n    render_nodes(source){\n\n        var self_render = this;\n        var on_screen_text_size = this.compute_node_font_size()\n        var subsampling_index = -1\n        var subsampling_module = 1 + Math.floor((on_screen_text_size)/this.model.settings.tree.node_vertical_size)\n        var real_node_radius = this.compute_node_radius()\n        var show_duplications = this.model.settings.display_duplication\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n        var deepest_tip = 0;\n\n        // update x pos with branch length\n        this.nodes.forEach(d => {\n            if (this.model.settings.has_branch_lenght && this.model.settings.use_branch_lenght) {\n                d.y = this.scale_branch_length(d.branch_size)\n            }\n            else{\n                d.y = this.scale_branch_depth(d.depth)\n            }\n\n            if (!this.model.settings.display_leaves){\n                d.subsampled = false;\n                return\n            }\n\n\n            if (!this.model.settings.subsample_label){\n                d.subsampled = true;\n                return\n            }\n\n            if (!d.children ) {\n\n                if (d.data.collapse && d.data.triangle_height >= on_screen_text_size){\n                    d.subsampled  = true\n                    return\n                }\n\n                subsampling_index += 1;\n                d.subsampled = (subsampling_index % subsampling_module === 0) ;\n            }\n\n        })\n\n        // Update the nodes...\n        var node = this.G.selectAll('g.node')\n            .data(this.nodes, d => { return d.ID  || (d.ID = ++this.id_gen); })\n\n        // Enter any new modes at the parent's previous position.\n        var nodeEnter = node.enter().append('g')\n            .attr('class', 'node')\n            .attr(\"id\", d => {return  this.uid + \"_\" + d.ID})\n            .attr(\"transform\", function(d) {\n                return \"translate(\" + mirror_factor*source.y0 + \",\" + source.x0 + \")\";\n            })\n            .on(\"mousedown\", function(d,i) {\n               d.stopPropagation();\n            })\n            .on('click', (d, i) =>  {\n                if (i.children || i._children) {this.click_nodes(d,i)}\n            })\n            .on('mouseover', (d, i) => {\n                if (this.model.settings.show_tooltips){\n\n                    var target = d.target || d.srcElement;\n\n                    if (this.container_object.api.settings.phylostratigraphy && target.nodeName != 'rect' ) {\n                        return\n                    }\n\n                    this.tooltip.transition().duration(50)\n                        .style('display', 'block')\n                        .style('opacity', 0.9)\n                        .style('left', (d.pageX + 12) +  'px')\n                        .style('top', d.pageY  + 'px');\n\n                        this.set_tooltip_text(i);\n\n\n                }\n\n            })\n            .on('mousemove', d => {\n                if (this.model.settings.show_tooltips) {\n                    this.tooltip\n                        .style('left', (d.pageX + 12) + 'px')\n                        .style('top', d.pageY + 'px');\n                }\n            })\n            .on('mouseout', () => {\n                if (this.model.settings.show_tooltips) {\n                    this.tooltip\n                        .style('display', 'none');\n                }\n            });\n\n\n        // Add Circle for the nodes\n        nodeEnter.filter(function(d){\n            return (d.children || d._children)\n        })\n            .append('circle')\n            .attr('class', 'node')\n            .attr('r', 1e-6)\n            .style(\"stroke\",  \"transparent\" )\n            .style(\"stroke-width\",  \"6px\" )\n            .style(\"fill\", function(d) {\n                return d.data.duplication && show_duplications  ? 'red' : d._children ? \"lightsteelblue\" : \"#fff\";\n            });\n\n\n        this.node_face_enter(nodeEnter)\n\n        // create null triangle\n        nodeEnter.append(\"path\")\n            .attr(\"class\", \"triangle\")\n            .style(\"fill\", \"#666\")\n            .attr(\"d\", function (d) {\n                return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n            })\n\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram) {\n            // create null stack\n            nodeEnter.append(\"g\")\n                .attr(\"class\", \"stackGroup\")\n        }\n\n        this.nodeUpdate = nodeEnter.merge(node);\n\n        // Transition to the proper position for the node\n        this.nodeUpdate.transition()\n            .duration(this.settings.duration)\n            .attr(\"transform\", (d) =>  {\n                return \"translate(\" + mirror_factor*d.y + \",\" + d.x + \")\";\n            });\n\n\n        // Update the node attributes and style\n\n        this.nodeUpdate.select('circle.node')\n            .attr('r', d => d._children || (!this.model.rooted && d.data.root ) ?  1e-6 : real_node_radius )\n            .style(\"fill\", function(d) {\n                return d.data.duplication && show_duplications ? 'red' : d._children ? \"lightsteelblue\" : \"#666\";\n            })\n            .attr('cursor', 'pointer');\n\n        this.node_face_update(this.nodeUpdate)\n\n        // Remove any exiting nodes\n        var nodeExit = node.exit().transition()\n            .duration(this.settings.duration)\n            .attr(\"transform\", function(d) {\n                return \"translate(\" + source.y + \",\" + source.x + \")\";\n            })\n            .remove();\n\n\n        // nullify the triangle\n        nodeExit.select(\"path\")\n            .attr(\"d\", function (d) {\n                return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n            });\n\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram) {\n            // create null stack\n            nodeEnter.selectAll(\"g .stackGroup\").remove()\n        }\n\n\n        // On exit reduce the node circles size to 0\n        nodeExit.select('circle')\n            .attr('r', 1e-6);\n\n        this.node_face_exit(nodeExit)\n\n        // Add collapsed triangle\n        this.nodeUpdate.each((d,i,nodes) => {\n\n            if (d._children) {\n\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]).select(\"path\").transition().duration(self_render.settings.duration)\n                    .attr(\"d\",  (d) => {\n\n                        const average = arr => arr.reduce( ( p, c ) => p + c.data.distance_to_root, 0 ) / arr.length;\n\n                        var y = average(self_render.getChildLeaves(d)) -d.data.distance_to_root\n\n                        var y_length = self_render.scale_branch_length(average(self_render.getChildLeaves(d))-d.data.distance_to_root)\n                        var x_length =  self_render.model.settings.tree.node_vertical_size * Math.sqrt(self_render.getChildLeaves(d).length) * collapse_ratio_vertical\n\n\n                       d.data.triangle_height = 2*x_length\n                        d.data.triangle_width = y_length\n\n                        this.node_face_update(d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]) )\n\n\n\n\n                        return \"M\" + 0 + \",\" + 0 + \"L\" + mirror_factor*y_length + \",\" + (-x_length) + \"L\" + mirror_factor*y_length + \",\" + (x_length) + \"L\" + 0 + \",\" + 0;\n                    })\n\n            }\n            if (d.children) {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]).select(\"path\").transition().duration(self_render.settings.duration)\n                    .attr(\"d\", function (d) {\n                        d.data.triangle_height = 0\n                        return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n                    });\n            }\n        })\n\n        // align to tip\n\n        if (this.model.settings.align_tip){\n\n            if (this.model.settings.has_branch_lenght && this.model.settings.use_branch_lenght) {\n\n                // update y pos with branch length\n                this.nodes.forEach(d => {\n\n                    var distance_root_to_tip = this.scale_branch_length(d.data.distance_to_root) + (d.data.triangle_width ? d.data.triangle_width : 0)\n\n                    if (deepest_tip <distance_root_to_tip ){\n                        deepest_tip =  distance_root_to_tip\n                    }\n                })\n\n                // Transition to the proper position for the node\n                this.nodeUpdate.transition()\n                    .duration(this.settings.duration)\n                    .attr(\"transform\", (d) =>  {\n\n                        if (d.children ){\n                            return \"translate(\" + (mirror_factor*d.y) + \",\" + d.x + \")\";\n                        }\n\n                        else if (d._children) {\n                            d.off_set_to_tip =   deepest_tip - this.scale_branch_length(d.data.distance_to_root) - d.data.triangle_width\n                            return \"translate(\" + (mirror_factor*(d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n\n                        else {\n                            d.off_set_to_tip =  deepest_tip - this.scale_branch_length(d.data.distance_to_root)\n                            return \"translate(\" + (mirror_factor* (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n\n\n\n\n                    });\n            }\n            else{\n\n                // update y pos with branch length\n                this.nodes.forEach(d => {\n\n                    var distance_root_to_tip = this.scale_branch_depth(d.data.depth) + (d.data.triangle_width ? d.data.triangle_width : 0)\n\n                    if (deepest_tip <distance_root_to_tip ){\n                        deepest_tip =  distance_root_to_tip\n                    }\n                })\n\n                // Transition to the proper position for the node\n                this.nodeUpdate.transition()\n                    .duration(this.settings.duration)\n                    .attr(\"transform\", (d) =>  {\n\n                        if (d.children ){\n                            return \"translate(\" + (mirror_factor*d.y) + \",\" + d.x + \")\";\n                        }\n\n                        else if (d._children) {\n                            d.off_set_to_tip =   deepest_tip - this.scale_branch_depth(d.data.depth) - d.data.triangle_width\n                            return \"translate(\" + (mirror_factor*(d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n\n                        else {\n                            d.off_set_to_tip =  deepest_tip - this.scale_branch_depth(d.data.depth)\n                            return \"translate(\" + (mirror_factor* (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n\n\n\n\n                    });\n            }\n\n\n\n\n        }\n\n\n        // Add Stack\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram){\n\n            this.nodeUpdate.filter(function(d){\n                return d.stackData && d.data.depth > 0\n            }).each((d, i, nodes) => {this.render_stack(nodes[i],d)});\n\n        }\n\n\n        // Store the old positions for transition.\n        this.nodes.forEach(function(d){\n            d.x0 = d.x;\n            d.y0 = mirror_factor * d.y;\n        });\n\n\n\n\n\n\n    }\n\n    render_edges(source){\n\n        var self_render = this;\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n        var real_edges_width = this.compute_edge_width()\n\n        // Update the links...\n        var link = this.G.selectAll('path.link')\n            .data(this.links,  d => { return d.ID  || (d.ID = ++this.id_gen); });\n\n        // Enter any new links at the parent's previous position.\n        var linkEnter = link.enter().insert('path', \"g\")\n            .attr(\"class\", \"link\")\n            .style(\"cursor\",\"pointer\")\n            .style(\"fill\",\"none\")\n            .style('stroke-width',  real_edges_width + 'px'   )\n            .attr('d', d => this.square_edges(\n                {x: source.x0, y: source.y0},{x: source.x0, y: source.y0}))\n\n        var linkUpdate = linkEnter.merge(link);\n\n\n        var compared_model = false\n        if (this.container_object.api.settings.compareMode && this.container_object.api.bound_container.includes(this.container_object)){\n\n            var con1 = this.container_object.api.bound_container[0]\n            var con2 =  this.container_object.api.bound_container[1]\n\n            var other_container = con1 == this.container_object ? con2 : con1\n\n            if (other_container.models.length > 0 && other_container.viewer.model && this.model.settings.similarity.includes(other_container.viewer.model.uid) ){\n\n                compared_model = other_container.viewer.model.uid\n            }\n\n        }\n\n        // Transition back to the parent element position\n        linkUpdate.transition()\n            .duration(this.settings.duration)\n            .style('stroke', (d) => {return this.color_edge(d, compared_model);})\n            .style('stroke-width',  real_edges_width + 'px'  )\n            .attr('d', d => this.square_edges(d, d.parent))\n\n        linkUpdate.on('click', (d,i) =>  {\n            if (this.container_object.api.settings.phylostratigraphy){return}\n            this.click_edges(d,i)})\n\n        // Remove any exiting links\n        var linkExit = link.exit().transition()\n            .duration(this.settings.duration)\n            .attr('d', d => this.square_edges({x: source.x, y: source.y}, {x: source.x, y: source.y}))\n            .remove();\n\n    }\n\n    color_edge(edge, compared_model){\n\n        if (edge.data.search_path){ return '#FF0000'}\n\n        else if (this.model.settings.style.color_accessor['node'] === \"Topology\" && compared_model !== false && edge.data.elementS[compared_model]  ) {\n\n            return this.colorScale['node'](edge.data.elementS[compared_model])\n        }\n\n        else if (this.model.settings.style.color_accessor['node'] === 'color'){\n\n            var h = edge.data.extended_informations[this.model.settings.style.color_accessor['node']];\n            if (typeof h == \"undefined\" ) {return \"#555\"}\n            else {return h}\n\n        }\n\n        else if (this.model.settings.style.color_accessor['node'] !== null){\n\n            var v = edge.data.extended_informations[this.model.settings.style.color_accessor['node']];\n            if (typeof v == \"undefined\" ) {return \"#555\"}\n            else {return this.colorScale['node'](v)}\n\n        }\n\n        else {\n            return \"#555\"\n        }\n\n    }\n\n    set_color_scale(type){\n\n        var type = (typeof type !== 'undefined') ? type : 'node';\n\n        var colorScaleDomain = false;\n        var colorScaleRange;\n        var number;\n\n\n        if (typeof this.model != \"undefined\" && this.model) {\n\n\n            // If categorical do special\n            var acc = this.model.settings.style.color_accessor[type]\n            var type_acc = this.model.settings.extended_data_type[acc]\n\n\n            if (type_acc == 'cat'){\n\n                this.colorScale[type] = this.container_object.api.get_color_scale(acc)\n\n\n\n                //var dom = this.model.settings.domain_extended_data[acc]\n                //this.colorScale[type] = d3.scaleOrdinal().domain(dom).range(d3.schemePaired);\n                return\n            }\n\n            else if (type_acc == 'color'){\n\n                this.colorScale[type] = null\n                return\n            }\n\n\n\n            number = this.model.settings.style.number_domain[type]\n\n\n\n            if (this.model.settings.style.color_accessor[type] != null && this.model.settings.style.color_accessor[type] != 'Topology' ) {\n\n                var ms = this.model.settings.style;\n\n                var ca = ms.color_accessor[type];\n\n                if (ms.color_extent_max[type][ca] == ms.color_extent_min[type][ca]){\n                    this.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate( ms.color_extent_max[type][ca], ms.color_extent_max[type][ca]-1)\n                }else{\n                    this.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate( ms.color_extent_max[type][ca], ms.color_extent_min[type][ca])\n                }\n\n\n                colorScaleRange = this.model.settings.style.color_domain[type];\n\n            }\n\n            else {\n                this.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate(1,0)\n                colorScaleRange = this.model.settings.style.color_domain[type];\n            }\n\n\n\n        }\n        else {\n\n            number = '5';\n            colorScaleRange = ['#253494', '#2C7FB8', '#41B6C4', '#C7E9B4', '#FFFFCC']\n            this.intercolor[type] = d3__WEBPACK_IMPORTED_MODULE_0__.interpolate(1, 0);\n        }\n\n\n        switch (number) {\n            case '2':\n                colorScaleDomain = [this.intercolor[type](0), this.intercolor[type](1)]\n                break;\n            case '3':\n                colorScaleDomain = [this.intercolor[type](0), this.intercolor[type](0.5) ,  this.intercolor[type](1)]\n                break;\n            case '4':\n                colorScaleDomain = [this.intercolor[type](0), this.intercolor[type](0.33), this.intercolor[type](0.66) ,  this.intercolor[type](1)]\n                break;\n            case '5':\n                colorScaleDomain = [this.intercolor[type](0), this.intercolor[type](0.25) ,this.intercolor[type](0.5) ,this.intercolor[type](0.75) ,  this.intercolor[type](1)]\n\n        }\n\n\n        this.colorScale[type] = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear()\n            .domain(colorScaleDomain)\n            .range(colorScaleRange);\n\n\n\n    }\n\n    separate(a, b) {\n\n        var spacer = 1;\n\n        spacer += a._children ? Math.sqrt(this.getChildLeaves(a).length) * collapse_ratio_vertical  : 0\n        spacer += b._children ? Math.sqrt(this.getChildLeaves(b).length) * collapse_ratio_vertical : 0\n\n        return spacer;\n    }\n\n    zoomed({transform}) {\n\n        var zooming = this.model.zoom ? transform.k != this.model.zoom.k : false;\n\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).attr(\"transform\", transform);\n\n        if (this.interface && this.model.settings.use_branch_lenght) {\n            this.interface.update_scale_value(transform.k);\n        }\n\n        if (typeof this.G != \"undefined\" && this.model != false ){\n\n            if ((zooming && !this.model.big_tree) || this.force_zoom_rescaling) {\n\n                var on_screen_text_size = this.compute_node_font_size()\n                var subsampling_index = -1\n                var subsampling_module = 1 + Math.floor((on_screen_text_size)/this.model.settings.tree.node_vertical_size)\n\n                // update x pos with branch length\n                this.nodes.forEach(d => {\n\n\n                    if (!this.model.settings.display_leaves ){\n                        d.subsampled = false;\n                        return\n                    }\n\n                    if (!this.model.settings.subsample_label){\n                        d.subsampled = true;\n                        return\n                    }\n\n\n\n                    if (!d.children ) {\n\n                        if (d.data.collapse && d.data.triangle_height >= on_screen_text_size){\n                            d.subsampled  = true\n                            return\n                        }\n\n                        subsampling_index += 1;\n                        d.subsampled = (subsampling_index % subsampling_module === 0) ;\n                    }\n\n\n                })\n\n\n                var real_node_radius = this.compute_node_radius()\n                this.G.selectAll('g.node').selectAll('circle').attr('r', (d) => {\n\n                    return d.data.collapse || (!this.model.rooted && d.data.root) ? 1e-6 :  real_node_radius }\n                )\n\n                this.node_face_update(this.G.selectAll('g.node'))\n\n                var real_edges_width = this.compute_edge_width()\n                this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n\n            }\n\n\n\n            this.model.store_zoomTransform(transform)\n\n\n\n\n            // if lock zoom activate\n            if (this.container_object.api.settings.compareMode && this.container_object.api.settings.sync_zoom && !this.container_object.api.settings.syncing_zoom){\n\n                this.container_object.api.settings.syncing_zoom = true\n\n                var other_container = this.container_object.api.bound_container[0] === this.container_object ? this.container_object.api.bound_container[1] : this.container_object.api.bound_container[0]\n\n                if (other_container.models.length > 0 && other_container.viewer.model != false){\n\n                    var m1 = this.get_height_hierarchy().middle*transform.k\n                    var m2 = other_container.viewer.get_height_hierarchy().middle*transform.k\n\n                    other_container.viewer.set_zoom(transform.k,transform.x,transform.y -m2 + m1 )\n\n                }\n                this.container_object.api.settings.syncing_zoom = false\n\n\n\n            }\n\n\n\n\n        }\n\n\n    }\n\n    square_edges(s, d) {\n\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n\n\n        if (!this.model.settings.align_tip || isNaN(s.off_set_to_tip) ){\n            return   \"M\" + mirror_factor*s.y + \",\" + s.x + \"L\" + mirror_factor*d.y + \",\" + s.x + \"L\" + mirror_factor*d.y + \",\" + d.x;\n\n        }\n        else {\n            return \"M\" + (mirror_factor * (s.y +  s.off_set_to_tip)) + \",\" + s.x + \"L\" + mirror_factor * d.y + \",\" + s.x + \"L\" + mirror_factor * d.y  + \",\" + d.x;\n        }\n    }\n\n    click_nodes(event, node) {\n\n        var menu = []\n\n        // phylostratigraphy mode\n        if (this.container_object.api.settings.phylostratigraphy && event.target.tagName === 'rect'){\n\n            this.container_object.api.settings.callback_stack_redirection(node.data.taxid,node.parent.data.taxid);\n            return\n\n        }\n\n         // Default mode\n        else {\n            if  (node.parent != null){\n\n                var menu = [\n                    {\n                        title: node.data.collapse ? 'Expand' : 'Collapse' ,\n                        action: () =>  {this.container_object.trigger_(\"collapse\", node.data, node)}\n                    },\n                    {\n                        title: 'Collapse All' ,\n                        action: () =>  {this.container_object.trigger_(\"collapseAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Expand All' ,\n                        action: () =>  {this.container_object.trigger_(\"expandAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Swap subtrees' ,\n                        action: () =>  {this.container_object.trigger_(\"swap\", node.data, node)}\n                    }\n                ]\n            }\n            else { // root\n                var menu = [\n                    {\n                        title: 'Expand All' ,\n                        action: () =>  {this.container_object.trigger_(\"expandAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Swap subtrees' ,\n                        action: () =>  {this.container_object.trigger_(\"swap\", node.data, node)}\n                    },\n\n                ]\n            }\n\n            if (this.container_object.api.settings.phylostratigraphy){\n\n                menu.push({\n                    title: 'Open genome page' ,\n                    action:  () =>  {this.container_object.api.settings.callback_ancestral_genome_redirection(node.data.taxid)}\n                })\n\n            }\n\n\n        }\n\n\n        menu.push({\n            title: 'Close' ,\n            action: () =>  {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n            }\n        })\n\n        var t = this.d3.zoomTransform(this.svg.node())\n\n        let div_i = this.container_object.div_id;\n\n        let py = document.getElementById(div_i).offsetTop\n        let px = document.getElementById(div_i).offsetLeft\n\n        var xy = t.invert([event.pageX-px,event.pageY-py]);\n\n        if(this.model.settings.mirror){\n            var x=  -xy[0]\n            var y = xy[1]\n        }\n        else{\n            var x=  xy[0]\n            var y = xy[1]\n        }\n\n        this.create_menu_click(menu, x,y,event,node)\n\n    }\n\n    click_edges(event,edge) {\n\n        var t = this.d3.zoomTransform(this.svg.node())\n\n        let div_i = this.container_object.div_id;\n\n        let py = document.getElementById(div_i).offsetTop\n        let px = document.getElementById(div_i).offsetLeft\n\n        var xy = t.invert([event.pageX-px,event.pageY-py]);\n\n        // because Chrome returns a MouseEvent for d3.event while Firefox returns a click. \\o/\n        var node_from_event = event.path ? event.path[0].__data__ : event.target.__data__\n\n\n\n        var menu = [{\n            title: 'Reroot' ,\n            action: () =>  {\n                this.container_object.trigger_(\"reroot\", node_from_event.data)\n            }\n        }, {\n                title: 'Trim subtree' ,\n                action: () =>  {\n                    this.container_object.trigger_(\"trim\", node_from_event)\n                }\n            },{\n            title: 'Open as new tree' ,\n            action: () =>  {\n                this.container_object.create_model_from_hierarchy_node(node_from_event)\n\n            }\n        },\n            {\n            title: 'Close' ,\n            action: () =>  {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n            }\n        }]\n\n        if(this.model.settings.mirror){\n            var x=  -xy[0]\n            var y = xy[1]\n        }\n        else{\n            var x=  xy[0]\n            var y = xy[1]\n        }\n\n        this.create_menu_click(menu,x,y, event, edge)\n    }\n\n    create_menu_click(menu, x ,y, event, e){\n\n        if (this.model.settings.mirror){\n            x=-x;\n        }\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n\n        /* build context menu */\n        var m = this.G.append(\"g\")\n        m.style('display', 'none');\n        m.attr('id', 'menu-node');\n\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        var fs = 20/k // scaled font size\n        var vps = 12/k // scaled vertical margin\n        var hps = 10/k // scaled horizontal margin\n        var rs = 8/k // scaled radius size\n\n        var r = m.append('rect')\n            .attr('height', menu.length * (fs+vps) + vps + 'px')\n            .style('fill', \"#eee\")\n            .attr('rx', rs)\n            .attr('ry', rs)\n\n        var gg = m.selectAll('menu_item')\n            .data(menu)\n            .enter()\n            .append('g')\n            gg.attr('cursor', 'pointer')\n            .attr('transform', function(d, i) {\n                return 'translate(' + hps + ',' + ((i + 1) * (fs+vps)) + ')';\n            })\n            .on('mouseover', function(d){\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(this).style('fill', 'steelblue');\n            })\n            .on('mouseout', function(d){\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(this).style('fill', 'black');\n            })\n            .on('click', function(d,i){\n                i.action(d);\n            })\n\n        var close = null\n\n        var t = gg.append('text')\n            .attr('cursor', 'pointer')\n            .attr(\"font-weight\", (d) =>  {\n                return d.title === \"Close\" ? 900 : 400\n            })\n            .style('font-size', d => {\n                return  fs + 'px';\n            })\n            .text(function(d) {\n                return d.title;\n            })\n\n\n        r.attr('width', 20 );\n        m.attr('transform', 'translate(' + x  + ',' + y  + ')');\n        m.style('display', 'block');\n        m.datum(event);\n\n\n\n        setTimeout(function(){\n\n            var w = 0;\n            var w_close = 0\n\n            t.each(function(d){\n\n                var l = d3__WEBPACK_IMPORTED_MODULE_0__.select(this).node().getComputedTextLength();\n                if (l > w) w = l;\n\n                if (d.title == \"Close\"){\n                    w_close = l;\n                }\n\n            })\n\n            var w_menu = w + 2*hps\n            r.attr('width', w_menu );\n\n            t.each(function(d){\n                if (d.title == \"Close\"){\n                    d3__WEBPACK_IMPORTED_MODULE_0__.select(this).attr('transform', 'translate(' + (w - w_close)/2  + ',' + 0  + ')');\n                }\n            })\n\n\n        }, 50)\n\n\n\n\n\n    }\n\n    apply_collapse_from_data_to_d3(data, d){\n        if (data.collapse && d.children != null ) {\n            d._children = d.children;\n            d.children = null;\n        }\n        else if (data.collapse == false && d._children != null) {\n            d.children = d._children;\n            d._children = null;\n\n        }\n\n    }\n\n    apply_collapseAll_from_data_to_d3(data, root_node){\n\n        var  node = root_node  , nodes = [node], children, i, index = -1;\n\n        while (node = nodes.pop()) {\n\n\n            this.apply_collapse_from_data_to_d3(node.data, node)\n\n\n            if (children = node.children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n            if (children = node._children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n        }\n\n    }\n\n    apply_expandAll_from_data_to_d3(data, root_node){\n\n        var  node = root_node  , nodes = [node], children, i, index = -1;\n\n        while (node = nodes.pop()) {\n\n            this.apply_collapse_from_data_to_d3(node.data, node)\n\n            if (children = node.children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n            if (children = node._children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n        }\n\n    }\n\n    apply_swap_from_data_to_d3(data, d){\n\n        var e = d.children.pop()\n        d.children.unshift(e)\n\n    }\n\n    apply_unswap_from_data_to_d3(data, d){\n\n        var e = d.children.shift()\n        d.children.push(e)\n\n    }\n\n    set_zoom(k,x,y) {\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select('#svg' + this.uid )\n            .call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(x,y).scale(k) );\n    }\n\n    get_height_hierarchy(){\n\n\n        var max_x = 0;\n        var min_x = 9999999999;\n\n        this.hierarchy.each(d => {\n\n            if(d.x > max_x){max_x= d.x}\n            if(d.x < min_x){min_x= d.x}\n        }\n        );\n\n\n        return {\n            'h':max_x - min_x,\n            'max_x':max_x ,\n            'min_x': min_x,\n            'middle': max_x -(max_x - min_x)/2\n        }\n\n    }\n\n    get_number_visible_tree_tips_at_depth(depth){\n\n        var tips = 0;\n\n        this.model.traverse(this.model.data, function(node,children){\n\n            if (node.depth > depth) {return}\n\n            if (children == null || node.collapse == true) {\n                tips+=1\n            }\n            } )\n\n        return tips\n\n    }\n\n    maximise_zoom(){\n\n        var old_zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n        this.container_object.add_action('Stretch tree',  this, this.render_with_settings, [old_zoom.k, old_zoom.x,old_zoom.y,this.model.settings.tree.node_horizontal_size, []] )\n        // Adjust Zoom-y to fit height\n        var r = this.get_height_hierarchy()\n        var vh = this.height - this.settings.style.offset_top_fit\n        var th = (Math.abs(r.min_x)+Math.abs(r.max_x))\n        var h_scale = vh/th // ratio\n\n\n\n        if (this.model.settings.mirror){\n            var x_tr = this.width - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n        else{\n            var x_tr = - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n\n        var off_rooting = (Math.abs(r.min_x)-Math.abs(r.max_x))/2\n        var y_tr =  -this.hierarchy.y + this.height/2 + off_rooting*h_scale\n        this.set_zoom(h_scale, x_tr, y_tr)\n\n\n        var w = 0\n\n        this.hierarchy.leaves().forEach((e) => {\n            let posy = e.y\n            if (e.data.collapse){\n                posy += e.data.triangle_width\n            }\n            w = posy > w ? posy : w\n        })\n\n        var ns = this.model.settings.tree.node_horizontal_size\n        var w_scale = (this.width - 80)/(w*h_scale)\n\n        this.container_object.modify_node_size('horizontal', (ns * w_scale) - ns )\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n\n    }\n\n    fit_to_viewer_height(){\n\n        var collapsed = this.model.get_all_collapse(this.model.data)\n        var old_zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n        this.container_object.add_action('Compact tree',  this, this.render_with_settings, [old_zoom.k, old_zoom.x,old_zoom.y,this.model.settings.tree.node_horizontal_size, collapsed] )\n\n        // Increment Collapsed Depth until \"Visible leaf\" > \"Max visible leaves\"\n        var depth;\n        for (depth = 1; depth < this.model.settings.tree.max_depth; depth++) {\n\n            var X = this.get_number_visible_tree_tips_at_depth(depth)\n            if (X > this.settings.max_visible_leaves) {\n                break\n            }\n        }\n\n        this.update_collapse_level(depth, true)\n\n\n        var r = this.get_height_hierarchy()\n        var estimated_height = r.h\n\n        // Adjust Zoom-y to fit height\n        var vh = this.height - this.settings.style.offset_top_fit // MARGIN\n        var th = (Math.abs(r.min_x)+Math.abs(r.max_x))\n        //var th = estimated_height // this.G.node().getBBox().height\n        var h_scale = vh/th\n\n\n        if (this.model.settings.mirror){\n            var x_tr = this.width - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n        else{\n            var x_tr = - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n\n        var off_rooting = (Math.abs(r.min_x)-Math.abs(r.max_x))/2\n        var y_tr =  -this.hierarchy.y + this.height/2 + off_rooting*h_scale\n        //var y_tr =  (this.height/2) - this.hierarchy.y - (r.min_x + (r.max_x - r.min_x)/2)/2\n\n        this.set_zoom(h_scale, x_tr, y_tr)\n\n\n        var w = 0\n\n\n        this.hierarchy.leaves().forEach((e) => {\n\n            let posy = e.y\n\n            if (e.data.collapse){\n                posy += e.data.triangle_width\n            }\n\n            w = posy > w ? posy : w\n        })\n\n\n        var ns = this.model.settings.tree.node_horizontal_size\n        var w_scale = (this.width - 80)/(w*h_scale)\n\n        this.container_object.modify_node_size('horizontal', (ns * w_scale) - ns )\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n\n\n\n\n\n    }\n\n    render_with_settings(scale, x,y,node_size, collapsed){\n\n        if (collapsed.length > 0){\n            this.model.apply_collapse_to_list(collapsed)\n            this.set_data(this.model)\n            this.render(this.hierarchy)\n        }\n\n        this.set_zoom(scale, x, y)\n\n        var delta_node_size = -(this.model.settings.tree.node_horizontal_size - node_size)\n\n        if (delta_node_size!=0){\n            this.container.modify_node_size('horizontal',  -(this.model.settings.tree.node_horizontal_size - node_size)    )\n        }\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n\n    }\n\n    // TUNNING todo should be in Controller\n    /*\n    modify_node_size(axis, variation){\n\n        if (axis === 'vertical') {\n            if ((this.model.settings.tree.node_vertical_size + variation) <= 0){return}\n            this.model.settings.tree.node_vertical_size += variation\n            //this.interface.update_slider(this.interface.slider_v, this.model.settings.tree.node_vertical_size)\n        }\n        else if (axis === 'horizontal') {\n            if ((this.model.settings.tree.node_horizontal_size + variation) <= 0){return}\n            this.model.settings.tree.node_horizontal_size += variation\n            //this.interface.update_slider(this.interface.slider_h, this.model.settings.tree.node_horizontal_size)\n        }\n\n        this.d3_cluster.nodeSize([ this.model.settings.tree.node_vertical_size,this.model.settings.tree.node_horizontal_size])\n        this.build_d3_cluster()\n        this.render(this.hierarchy)\n\n\n        if (this.interface && this.model.settings.use_branch_lenght) {\n           var k = this.d3.zoomTransform(d3.select(\"#master_g\" + this.uid).node()).k\n            this.interface.update_scale_value(k);\n        }\n\n    }\n\n     */\n\n    toggle_use_length(){\n        this.model.settings.use_branch_lenght = !this.model.settings.use_branch_lenght\n\n        if (!this.model.settings.use_branch_lenght){this.interface.remove_scale()}\n        else{this.interface.add_scale()}\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n        this.maximise_zoom()\n    }\n\n    toggle_align_tip(){\n        this.model.settings.align_tip = !this.model.settings.align_tip\n\n        this.render(this.hierarchy)\n    }\n\n    toggle_mirror(){\n        this.model.settings.mirror = !this.model.settings.mirror\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n        var zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n            this.set_zoom(zoom.k,this.width-zoom.x,zoom.y)\n\n\n    }\n\n    toggle_internal_label(){\n\n        this.model.settings.display_internal_label = !this.model.settings.display_internal_label\n        this.render(this.hierarchy)\n    }\n\n    toggle_duplication(){\n        this.model.settings.display_duplication = !this.model.settings.display_duplication\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_leaves(){\n        this.model.settings.display_leaves = !this.model.settings.display_leaves\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_tooltips(){\n        this.model.settings.show_tooltips = !this.model.settings.show_tooltips\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_subsample(){\n        this.model.settings.subsample_label = !this.model.settings.subsample_label\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        if(this.model.settings.subsample_label){\n            this.model.settings.tree.font_size = this.model.settings.tree.font_size*k\n        }\n        else{\n            this.model.settings.tree.font_size = this.model.settings.tree.font_size/k\n        }\n\n        this.render(this.hierarchy)\n\n        //this.interface.update_slider(this.interface.slider_t, this.model.settings.tree.font_size)\n\n    }\n\n    toggle_multiple_search(){\n        this.model.settings.multiple_search = !this.model.settings.multiple_search\n    }\n\n    toggle_use_meta_for_leaf(){\n        this.model.settings.use_meta_for_leaf = !this.model.settings.use_meta_for_leaf\n    }\n\n    toggle_use_meta_for_node(){\n        this.model.settings.use_meta_for_node = !this.model.settings.use_meta_for_node\n    }\n\n\n    // stack\n\n    toggle_only_support(){\n\n        this.model.settings.stack.only_support = !this.model.settings.stack.only_support\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    toggle_show_stack_number(){\n        if (this.model.settings.stack.showHistogramValues){\n            this.model.settings.stack.showHistogramValues = false\n        }\n        else{\n            this.model.settings.stack.showHistogramValues = true\n        }\n\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    toggle_height_max_ratio(){\n        if (this.model.settings.stack.maxStackHeight === 'max'){\n            this.model.settings.stack.maxStackHeight = 'ratio'\n        }\n        else{\n            this.model.settings.stack.maxStackHeight = 'max'\n        }\n\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n    }\n\n    update_stack_height(val){\n        this.model.settings.stack.stackHeight = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_width(val){\n        this.model.settings.stack.stackWidth = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_font(val){\n        this.model.settings.stack.legendTxtSize = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_type(val){\n        this.model.settings.stack.type = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n\n    update_collapse_level(val, refresh_interface){\n\n        var refresh_interface = (typeof refresh_interface !== 'undefined') ? refresh_interface : true;\n\n\n        this.model.settings.collapse_level = val\n        this.container_object.collapse_depth(this.model.settings.collapse_level, this.model.data)\n        //this.set_data(this.model, refresh_interface)\n        this.build_d3_cluster()\n        this.render(this.hierarchy)\n\n        if (refresh_interface){\n            this.interface = new _interface_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](this, this.container_object)\n        }\n        else{\n            var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n            if (this.interface && this.model.settings.use_branch_lenght){\n                this.interface.update_scale_value(k);\n            }\n\n        }\n\n\n\n    }\n\n\n\n    toggle_dessimode(){\n        this.model.settings.dessimode = !this.model.settings.dessimode\n\n        if (this.model.settings.dessimode) {\n\n            var r= Math.floor(Math.random() * 101);\n\n            if (r > 50) {alert(\"[Common] If I may just give a little feedback... [ following 1200 lines truncated]\")}\n            else if (r > 10) {alert(\"[Rare] If I may just give a little feedback... [ following 1200 lines truncated]\")}\n            else{alert(\"[Lengendary] Have you heard about banana ?\")}\n\n\n        }\n    }\n\n    // HELPER\n    getChildren(d) {\n        return d._children ? d._children : (d.children ? d.children : []);\n    }\n\n    getChildLeaves(d) {\n\n        if (d.children || d._children) {\n            var leaves = [];\n            var children = this.getChildren(d);\n            for (var i = 0; i < children.length; i++) {\n                leaves = leaves.concat(this.getChildLeaves(children[i]));\n            }\n            return leaves;\n        } else {\n            return [d];\n        }\n    }\n\n    get_random_node(){\n        var ns = []\n        this.hierarchy.each(d => ns.push(d));\n        return ns[Math.floor(Math.random() * ns.length)];\n    }\n\n    // UTILS\n    centerNode(source) {\n\n        //this.svg.transition().call(this.zoom.translateTo, source.y0,source.x0)\n        this.svg.transition().call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(this.width/2-source.y0,this.height/2-source.x0).scale(1) )\n\n    }\n\n    zoom_in(){\n        this.svg.transition().call(this.zoom.scaleBy, 2)\n    }\n\n    zoom_out(){\n        this.svg.transition().call(this.zoom.scaleBy, 0.5)\n    }\n\n    zoom_by(val){\n        this.svg.transition().call(this.zoom.scaleBy, val)\n    }\n\n    // STACK\n    render_stack(d,e){\n\n        var ms = this.model.settings.stack\n\n        var data = (ms.has_support && ms.only_support ) ? e.stackData_support[ms.type] : e.stackData[ms.type];\n\n\n        var stackGroup  = this.d3.select(d);\n\n\n\n        var xDistanceFromNode =  parseInt(ms.xInitialRightMargin) + parseInt(ms.stackWidth)\n        var txtDistanceFromBar = parseInt(ms.stackWidth) + parseInt(ms.margin)\n\n        if (ms.showHistogramValues) {\n\n            var legends = stackGroup.selectAll(\".legendtxt\")\n                .data(data)\n                .enter()\n                .append(\"text\")\n                .classed(\"legendtxt\", true)\n                .text(function (d) {\n                    return d[0].realsize !== 0 ? d[0].realsize : \"\";\n                }).attr(\"x\", function () {\n                    return (0 - xDistanceFromNode) + txtDistanceFromBar;\n                }).attr(\"y\", function (d) {\n                    // TODO adjust based on feedback\n                    if(d[0].y0 < 0){\n                        // legend below zero line\n                        return parseInt(ms.legendTxtSize)+2;\n                    }\n\n                    // if bar height smaller than text size, put text on bottom\n                    if(d[0].y < parseInt(ms.legendTxtSize) && d[0].y0 > 0) {\n                        return -(d[0].y0 - d[0].y);\n                    }\n\n                    // center legend text vertically with some extra padding\n                    return -(d[0].y0 - ((d[0].y + parseInt(ms.legendTxtSize))/2));\n                }).attr(\"font-size\", parseInt(ms.legendTxtSize)).attr(\"stroke\", \"black\")\n\n        }\n        if (ms.showHistogramValues) { // todo shulld be showHistogramSummaryValue\n\n            var summaryLegend = stackGroup.selectAll(\".stackGroup\")\n                .data(function (d) {\n                    return [d];\n                })\n                .enter()\n                .append(\"text\")\n                .classed(\"legendsummarytxt\", true)\n                .text(function (d) {\n                    if (ms.has_support && ms.only_support){\n                        var summary_number = ms.type === \"genes\" ? d.data.nr_hogs_support : d.numberEvents_; // todo add nr_proteins and  numberEvents\n                    }\n                    else{\n                        var summary_number = ms.type === \"genes\" ? d.data.nr_hogs : d.numberEvents; // todo add nr_proteins and  numberEvents\n                    }\n\n                    return summary_number > 0 && typeof summary_number == 'number' ? summary_number : \"\";\n                }).attr(\"x\", function () {\n                    return 0 - (xDistanceFromNode + 30)\n                }).attr(\"y\", function (d) {\n                    return 0 - ms.margin;\n                }).attr(\"font-size\", parseInt(ms.legendTxtSize)).attr(\"stroke\", \"black\")\n\n        }\n\n        var stackSlices = stackGroup.selectAll(\"rect\")\n            .data(data)\n            .enter()\n            .append(\"rect\");\n\n        var slices = stackSlices\n            .style(\"fill\", (d,i,node) => { return this.settings.stack.colorMap[d[0].sizelbl]\n            })\n            .style(\"opacity\", 0.8)\n            .attr(\"y\", function (d) {\n                return 0 - d[0].y0 - 0.5;\n            })\n            .attr(\"x\", function (d) {\n                return 0 - xDistanceFromNode;\n            })\n            .attr(\"height\", function (d) {\n                return d[0].size\n            })\n            .attr(\"width\", ms.stackWidth)\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\".stackGroup\").moveToFront();\n\n\n\n    }\n\n    compute_color_map_stack(){\n\n        var l = this.settings.stack.labels\n        var c = this.settings.stack.colors\n\n        var colMap =  c.reduce(function(colMap, col, index) {\n\n            colMap[l[index]] = col;\n            return colMap;\n        }, {})\n\n        return colMap\n\n    }\n\n    getStackNormalizer(d, type){\n\n        var ms = this.model.settings.stack\n\n        var max_genome = (ms.has_support && ms.only_support) ? this.model.largestGenome_support : this.model.largestGenome\n        var max_event = (ms.has_support && ms.only_support) ? this.model.largestGenome_support : this.model.largestGenome\n\n\n        if(type === 'genes' || !type){\n\n            if(ms.maxStackHeight === \"max\" && max_genome > 0){\n                var normalizer = ms.stackHeight / max_genome;\n            } else if(Number.isInteger(ms.maxStackHeight)){\n                var normalizer = ms.maxStackHeight / (d.retained + d.duplicated + d.gained + Math.abs(d.lost));\n            } else {\n                var normalizer = ms.stackHeight / (d.retained + d.duplicated + d.gained + Math.abs(d.lost));\n            }\n\n        } else {\n\n            if(ms.maxStackHeight === \"max\" && max_event > 0){\n                var normalizer = ms.stackHeight / max_event;\n            } else if(Number.isInteger(ms.maxStackHeight)){\n                var normalizer = m.maxStackHeight / (d.duplications + d.gained + Math.abs(d.lost));\n            } else {\n                var normalizer = ms.stackHeight / (d.duplications + d.gained + Math.abs(d.lost));\n            }\n\n        }\n\n        return normalizer;\n\n    }\n\n    barStack(seriesDataAll, type, only_support = false) {\n\n        var data;\n\n        if(type === 'genes' || !type) {\n            data = [[{}], [{}], [{}], [{}]];\n        } else {\n            data = [[{}], [{}], [{}]];\n        }\n\n        var size = 0;\n        if (only_support){\n            var d = seriesDataAll.data.evolutionaryEvents_support;\n        }\n        else{\n            var d = seriesDataAll.data.evolutionaryEvents;\n        }\n\n        var posBase = 0; // positive base\n        var stackIndex = 0;\n        var seriesIndex = 0;\n\n        var normalizer = this.getStackNormalizer(d, type);\n\n        /* in case there's no eveolutionary events */\n        normalizer = !isFinite(normalizer) ? 1 : normalizer;\n\n        if (typeof d.gained == 'undefined'){\n            d.gained = 0\n        }\n\n        if (typeof d.gained == 'undefined'){\n            d.gained = 0\n        }\n\n        if (typeof d.retained == 'undefined'){\n            d.retained = 0\n        }\n\n        if (typeof d.duplicated == 'undefined'){\n            d.duplicated = 0\n        }\n\n        if (typeof d.duplications == 'undefined'){\n            d.duplications = 0\n        }\n\n        if (typeof d.lost == 'undefined'){\n            d.lost = 0\n        }\n\n\n\n\n\n\n        var realSize;\n        var StackSizeretained = (d.retained) ? stackScale(d.retained, normalizer) : 0;\n        var StackSizeDuplicated = (d.duplicated) ? stackScale(d.duplicated, normalizer) : 0;\n        var StackSizeDuplication = (d.duplications) ? stackScale(d.duplications, normalizer) : 0;\n        var StackSizeGained = (d.gained) ? stackScale(d.gained, normalizer) : 0;\n        var StackSizeLost = (d.lost) ? stackScale(d.lost, normalizer) : 0;\n        var posStackSize = StackSizeGained + StackSizeDuplicated + StackSizeretained;\n\n        if(type === 'genes' || !type){\n\n            realSize = Math.abs(d.retained) > 0 ? Math.abs(d.retained) : 0;\n            var posBase = posBase + StackSizeretained;\n            data[stackIndex][seriesIndex] = new seriesElement('Retained', realSize, StackSizeretained, posBase, posStackSize)\n            stackIndex++;\n\n            realSize = Math.abs(d.duplicated);\n            var posBase = posBase + StackSizeDuplicated\n            data[stackIndex][seriesIndex] = new seriesElement('Duplicated', realSize, StackSizeDuplicated, posBase, posStackSize)\n            stackIndex++;\n        } else {\n\n            realSize = Math.abs(d.duplications);\n            var posBase = posBase + StackSizeDuplication\n            data[stackIndex][seriesIndex] = new seriesElement('Duplications', realSize, StackSizeDuplication, posBase, posStackSize)\n            stackIndex++;\n        }\n\n        realSize = Math.abs(d.gained);\n        var posBase = posBase + StackSizeGained\n        data[stackIndex][seriesIndex] = new seriesElement('Gained', realSize, StackSizeGained, posBase, posStackSize)\n        stackIndex++;\n        realSize = Math.abs(d.lost);\n        /* move lost down a little to make it easier to hover it and not the node line */\n        data[stackIndex][seriesIndex] = new seriesElement('Lost', realSize, StackSizeLost, -1, posStackSize)\n\n        function seriesElement(sizeLbl, realSize, size, y0, posStackSize){\n            this.sizelbl = sizeLbl\n            this.realsize = realSize\n            this.size = Math.abs(size)\n            this.y = size\n            this.y0 = y0\n            this.posStackSize = posStackSize;\n        }\n\n        function stackScale(val, normalizer){\n            return val * normalizer;\n        }\n\n        data.extent = d3__WEBPACK_IMPORTED_MODULE_0__.extent(\n            d3__WEBPACK_IMPORTED_MODULE_0__.merge(\n                d3__WEBPACK_IMPORTED_MODULE_0__.merge(\n                    data.map(function(e) {\n                        return e.map(function(f) {\n                            return [f.y0, f.y0 - f.size]\n                        })\n                    })\n                )\n            )\n        )\n\n        return data;\n    }\n\n    isOdd(num) { return num % 2;}\n\n    compute_node_font_size(){\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        if (!this.model.settings.subsample_label){\n           k=1\n        }\n\n        var fs =  this.model.settings.tree.font_size/k ;\n\n        return fs\n\n        /*\n        if (d._children && fs > d.data.triangle_height){\n            fs = d.data.triangle_height\n        }\n\n        var max_leave = this.model.settings.tree.node_vertical_size*k\n\n        if (!d.children && !d._children && fs > max_leave){\n            fs = max_leave\n        }\n\n        return fs+ \"px\"\n\n\n         */\n    }\n\n    compute_node_radius(){\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n        var nr =  this.model.settings.tree.node_radius/k ;\n        return (nr > this.model.settings.tree.node_vertical_size/2) ? this.model.settings.tree.node_vertical_size/2 : nr\n    }\n\n    compute_edge_width(){\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n        var ew = this.model.settings.tree.line_width/k;\n        return (ew > this.model.settings.tree.node_vertical_size/2) ? this.model.settings.tree.node_vertical_size/2 : ew\n    }\n\n    get_label_extended_information(node, type){\n        return (type == 'Name') ? node.data.name :  node.data.extended_informations[type]\n    }\n\n    node_face_enter(nodeEnter){\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        var on_screen_text_size = this.compute_node_font_size()\n        var show_lt = this.model.settings.display_internal_label_left_top !== false\n        var show_lb = this.model.settings.display_internal_label_left_bottom !== false\n        var mirror_factor = this.model.settings.mirror ? true : false;\n\n        // Add labels for the nodes\n        nodeEnter.append('text')\n            .attr(\"class\", \"right\")\n            .attr(\"dy\", \".35em\")\n            .style('font-size', d => {\n\n                var collapse_text = false\n                if (d.data.collapse){\n                    collapse_text = d.data.triangle_height >= on_screen_text_size + 'px' ? true : false\n                }\n\n                return d.subsampled || collapse_text   ? on_screen_text_size : '0px' ;\n            })\n            .attr(\"font-weight\", (d) =>  {\n                return  400\n                //return d.children || d._children ? 900 : 400\n            })\n            .attr('fill', (d) => {\n                return \"#212529\";\n            })\n            .attr(\"y\", (d) => {\n                if (d.parent == null){return 0}\n                else if (d.children || d._children){\n                    if (d.children && this.isOdd(d.children.length)){\n                        return 13\n                    }\n                    if (d._children && this.isOdd(d._children.length)){\n                        return 13 // todo internal name offsetted if collapse\n                    }\n                    return 0\n                }\n                return 0\n            })\n            .attr(\"x\", function(d) {\n                var scale = (d.children || d._children) ? 1 : k\n                return d.parent == null || mirror_factor ? -13/scale : 13/scale;\n            })\n            .attr(\"text-anchor\", function(d) {\n                return d.parent == null || mirror_factor ? \"end\" : \"start\"; // todo better deal with internal name\n            })\n            .text(function(d) { return d.data.name; });\n\n\n        nodeEnter.filter(function(d) { return (d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_top\")\n            .attr(\"dy\", \".35em\")\n            //.attr(\"alignment-baseline\", \"ideographic\" )\n            .style('font-size', d => {\n                return show_lt ? this.model.settings.style.font_size_internal + 'px' : '0px' ;\n            })\n            .attr(\"font-weight\", (d) =>  {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return -13\n            })\n            .attr(\"x\", function(d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function(d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n\n        nodeEnter.filter(function(d) { return (d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_bottom\")\n            .attr(\"dy\", \".35em\")\n            //.attr(\"alignment-baseline\", \"hanging\" )\n            .style('font-size', d => {\n                return show_lb ? this.model.settings.style.font_size_internal + 'px': '0px' ;\n            })\n            .attr(\"font-weight\", (d) => {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return 13\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function (d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n    }\n\n    node_face_update(nodes){\n\n        var on_screen_text_size = this.compute_node_font_size()\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n        var show_r = this.model.settings.display_internal_label !== false\n        var show_lt = this.model.settings.display_internal_label_left_top !== false\n        var show_lb = this.model.settings.display_internal_label_left_bottom !== false\n        var mirror_factor = this.model.settings.mirror;\n\n        nodes.select('text.right')\n            .text((d) => {\n                if (d.children || d._children){\n\n                    if (d.data.collapse){\n\n                        if (this.container_object.api.settings.phylostratigraphy){\n                            return d.data.name\n                        }\n\n                        let l = d.data.leaves\n\n                        if (l.length <= 0){\n                            d.data.leaves = this.model.get_leaves(d.data)\n                        }\n\n                        return '[' + l[0].name + ' ... ' +  l[l.length-1].name + ']'\n                    }\n                    \n                    return show_r ? this.get_label_extended_information(d, this.model.settings.display_internal_label) : '';\n                }\n                return d.data.name;\n            })\n            .attr(\"x\", function(d) {\n                let y_offset = (typeof d.data.triangle_width !== 'undefined') ? d.data.triangle_width : 0;\n\n                var scale = (d.children || d._children) ? 1 : k\n\n                if (mirror_factor){\n                    return  -(y_offset + 13/scale);\n                }\n\n                return d.parent == null ? -13/scale : y_offset + 13/scale;\n            })\n            .attr(\"y\", 0)\n            .attr('fill', (d) => {\n\n                if (!(d.children || d._children)){\n\n\n                    var acc = this.model.settings.style.color_accessor['leaf']\n                    var type_acc = this.model.settings.extended_data_type[acc]\n\n\n\n                    if (type_acc === 'color'){\n\n                        var g = d.data.extended_informations[acc];\n\n                        if (typeof g !== \"undefined\" ) {\n                            return g\n                        }\n\n\n                    }\n\n                    else if (acc !== null){\n\n                        var v = d.data.extended_informations[acc];\n\n                        if (typeof v !== \"undefined\" ) {\n\n                            if (type_acc == 'cat'){\n\n                                var cs = this.container_object.api.get_color_scale(acc)\n                                return cs.get_color(v)\n\n                            }\n\n                            else{\n                                return this.colorScale['leaf'](v)\n                            }\n\n\n                        }\n\n\n                    }\n\n                }\n\n                let c =  d.data.search_node ? \"#FF0000\"  : \"#212529\";\n                return c\n            })\n            .style('font-size', d => {\n\n                if (d.children){\n                    return show_r ? this.model.settings.style.font_size_internal + 'px' : '0px';\n                }\n\n                return d.subsampled   ? on_screen_text_size + 'px' : '0px' ;\n\n\n            })\n\n        nodes.select('text.left_top')\n            .style('font-size', d => {\n                return show_lt ? this.model.settings.style.font_size_internal+ 'px' : '0px';\n            })\n            .text( (d) => {\n                return show_lt ? this.get_label_extended_information(d, this.model.settings.display_internal_label_left_top) : '';\n            })\n\n        nodes.select('text.left_bottom')\n            .style('font-size', d => {\n                return show_lb ? this.model.settings.style.font_size_internal + 'px' : '0px';\n            })\n            .text( (d) => {\n                return show_lb ? this.get_label_extended_information(d, this.model.settings.display_internal_label_left_bottom): '';\n            })\n    }\n\n    node_face_exit(nodeExit){\n\n        // On exit reduce the opacity of text labels\n        nodeExit.select('text')\n            .style('fill-opacity', 1e-6);\n    }\n\n};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/viewer.js?");
+eval("__webpack_require__.r(__webpack_exports__);\n/* harmony export */ __webpack_require__.d(__webpack_exports__, {\n/* harmony export */   \"default\": () => (/* binding */ Viewer)\n/* harmony export */ });\n/* harmony import */ var d3__WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__(/*! d3 */ \"./node_modules/d3/index.js\");\n/* harmony import */ var _interface_js__WEBPACK_IMPORTED_MODULE_1__ = __webpack_require__(/*! ./interface.js */ \"./src/interface.js\");\n/* harmony import */ var d3_v6_tip__WEBPACK_IMPORTED_MODULE_2__ = __webpack_require__(/*! d3-v6-tip */ \"./node_modules/d3-v6-tip/build/d3-v6-tip.js\");\n/* harmony import */ var d3_v6_tip__WEBPACK_IMPORTED_MODULE_2___default = /*#__PURE__*/__webpack_require__.n(d3_v6_tip__WEBPACK_IMPORTED_MODULE_2__);\n\n\n\n\nd3__WEBPACK_IMPORTED_MODULE_0__.selection.prototype.moveToFront = function() {\n    return this.each(function() {\n        this.parentNode.appendChild(this);\n    });\n};\n\nvar uid_viewer = 0 // unique id generator is bound to a single Viewer()\nconst collapse_ratio_vertical = 0.2 // how much a triangle is vertically narrow\n\n// D3 viewer that render any model tree\nclass Viewer {\n\n    constructor(container) {\n\n        // General\n        this.container_object = container // related Container()\n        this.uid = uid_viewer ++; // unique viewer() id\n        this.data; // current model.data used\n        this.model = false; // current model\n\n        // D3\n        this.d3 = d3__WEBPACK_IMPORTED_MODULE_0__ // d3.js instance that contain information about zoom, etc..\n        this.hierarchy; // converted model data into d3 comptabile data format\n        this.d3_cluster; // d3 layout to compute 2D position for d3 hierarchy object\n        this.d3_cluster_data; // d3 layout fed with d3 hierarchy data\n        this.zoom;\n        this.id_gen = 0; // unique id generator for d3 id\n        this.max_length;\n        this.scale_branch_length; // scale between branch length and x pos\n\n        // DOM\n        this.svg;\n        this.svg_d3;\n        this.G;\n        this.G_d3;\n        this.container = document.getElementById(this.container_object.div_id);\n        this.container_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.container);\n        this.container_d3.style('font-family', 'monospace !important' )\n\n        this.interface;\n        this.blinking=0;\n\n        // Settings\n        this.settings = {\n            'duration' : 300,\n            'max_visible_leaves' : 30,\n            'style': {\n                'offset_top_fit': 140,\n                'translate_top_fit': 60,\n                'margin' : {top: 16, right: 16, bottom: 16, left: 96},\n\n            },\n            'stack':{\n                'labels' : [\"Retained\", \"Duplicated\", \"Gained\", \"Lost\", \"Duplications\", \"Gains\", \"Losses\"],\n                'colors' : [\"#1f77b4\", \"#ff7f0e\", \"#2ca02c\", \"#d62728\", \"#ff7f0e\", \"#2ca02c\", \"#d62728\"],\n                'colorMap' : {},\n            }\n\n        }\n\n        this.width = parseFloat(window.getComputedStyle(this.container).width)  -  this.settings.style.margin.left - 2*this.settings.style.margin.right;\n        this.height = parseFloat(window.getComputedStyle(this.container).height) - 2*this.settings.style.margin.top - this.settings.style.margin.bottom;\n\n        if (this.model){\n            this.model.set_color_scale(undefined,this.container_object.api)\n        }\n\n        // ZOOM\n        this.force_zoom_rescaling = false\n        this.zoom = d3__WEBPACK_IMPORTED_MODULE_0__.zoom().on(\"zoom\", (d, i) =>  { return this.zoomed(d,i)} )\n\n\n        // SVG\n        this.svg = this.container_d3.append(\"svg\")\n            .attr(\"id\", \"svg\" + this.uid)\n            .attr(\"width\", this.width + this.settings.style.margin.left + this.settings.style.margin.right )\n            .attr(\"height\", this.height + this.settings.style.margin.top + this.settings.style.margin.bottom)\n            .call(this.zoom)\n            .on(\"dblclick.zoom\", null)\n            .call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(this.settings.style.margin.left,  (this.height/2 +  this.settings.style.margin.top) ))\n\n\n        this.svg_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.svg)\n\n        // G element for zoom/transform\n        //this.G = this.svg.append(\"g\")\n        //    .attr(\"id\", \"master_g\" + this.uid)\n        //    .attr(\"transform\", \"translate(\"+ this.settings.style.margin.left + \",\" + (this.height/2 +  this.settings.style.margin.top) + \")\")\n        //this.G_d3 = d3.select(this.G);\n\n        this.build_master_g()\n\n        // D3 TREE LAYOUT\n        this.d3_cluster = d3__WEBPACK_IMPORTED_MODULE_0__.cluster()\n            .separation((a,b) =>  {return this.separate(a,b)})\n\n        // MISC.\n        this.settings.stack.colorMap = this.compute_color_map_stack()\n\n        // close setting if click outside on svg\n\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#svg\" + this.uid).on(\"click\", (d,i) => {\n            this.interface.menu_settings.style(\"display\", 'none');\n            this.interface.menu_export.style(\"display\", 'none')\n        })\n\n\n    }\n\n    // DATA\n    set_data(model, refresh_interface = true){\n\n\n        this.data = model.data;\n        this.model = model;\n\n        this.d3_cluster.nodeSize([this.model.settings.tree.node_vertical_size,this.model.settings.tree.node_horizontal_size])\n\n        this.build_d3_data();\n\n        if (this.model){\n            this.model.set_color_scale(undefined, this.container_object.api)\n        }\n\n        if (refresh_interface){\n            this.interface = new _interface_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](this, this.container_object)\n        }\n\n\n    }\n\n    remove_data(){\n\n        this.data = null;\n        this.model = null;\n        this.destroy_master_g()\n        this.build_master_g()\n\n    }\n\n    destroy_master_g(){\n        this.svg.select(\"#master_g\" + this.uid).remove()\n        this.G = null\n        this.G_d3 = null\n    }\n\n    build_master_g(){\n        this.G = this.svg.append(\"g\")\n            .attr(\"id\", \"master_g\" + this.uid)\n            .attr(\"transform\", \"translate(\"+ this.settings.style.margin.left + \",\" + (this.height/2 +  this.settings.style.margin.top) + \")\")\n        this.G_d3 = d3__WEBPACK_IMPORTED_MODULE_0__.select(this.G);\n\n\n    }\n\n    build_d3_data(){\n\n        // Build d3 hierarchy\n        this.hierarchy = d3__WEBPACK_IMPORTED_MODULE_0__.hierarchy(this.data, d => d.children );\n        this.hierarchy.x0 = this.height / 2;\n        this.hierarchy.y0 = 0;\n\n        // Transfer \"collapse\" information from model data to d3 data\n        this.hierarchy.each(d => {\n\n            d.ID = null;\n\n            if (d.data.collapse) {\n                d._children = d.children;\n                d.children = null;\n            }\n            else {\n                d._children = null;\n            }\n        })\n\n        this.build_d3_cluster()\n\n\n\n    }\n\n    build_d3_cluster(){\n\n        // Build d3 layout\n        this.d3_cluster_data = this.d3_cluster(this.hierarchy);\n\n        // compute the branch length from the root till each nodes (d.branch_size)\n        this.max_length = 0\n        this.max_depth = 0\n        this.hierarchy.eachBefore(d => {\n            if (d.parent) {\n                d.branch_size = d.parent.branch_size + d.data.branch_length\n                if (d.branch_size > this.max_length) {\n                    this.max_length = d.branch_size\n                }\n                if (d.depth > this.max_depth) {\n                    this.max_depth = d.depth\n                }\n\n            } else {\n                d.branch_size = 0\n            }\n        })\n\n        this.compute_stack_data()\n\n        this.build_scale_branch_length() // todo dont build scale on collapse\n\n        //this.interface = new Interface(this, this.container_object)\n\n\n\n    }\n\n    compute_stack_data(){\n        // store required data for stack on node\n        if (this.model.settings.has_histogram_data){\n            this.hierarchy.eachBefore((d, i, node) => {\n\n                if( d.data.evolutionaryEvents) {\n\n                    let stackData = []\n                    stackData['genes'] = this.barStack(d, 'genes');\n                    stackData['events'] = this.barStack(d, 'events');\n\n                    d.stackData = stackData\n                }\n\n                if( this.model.settings.stack.has_support &&d.data.evolutionaryEvents_support) {\n\n                    let stackData_support = []\n                    stackData_support['genes'] = this.barStack(d, 'genes', true);\n                    stackData_support['events'] = this.barStack(d, 'events', true);\n\n                    d.stackData_support = stackData_support\n                }\n\n            })\n        }\n    }\n\n    build_scale_branch_length(){\n\n        var max_y = 0;\n        this.d3_cluster_data.descendants().forEach(d => {\n            if (d.y > max_y) {\n                max_y = d.y\n            }\n        })\n\n\n\n\n        this.scale_branch_length = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear().domain([0, this.max_length]).range([this.d3_cluster_data.y, max_y])\n        this.scale_branch_depth = d3__WEBPACK_IMPORTED_MODULE_0__.scaleLinear().domain([0, this.max_depth]).range([this.d3_cluster_data.y, max_y])\n    }\n\n    // RENDERING\n    render(source, duration){\n\n        var duration;\n\n        if (typeof duration !== 'undefined') {\n            duration = duration;\n        }\n        else {\n            duration = this.settings.duration;\n        }\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\"#menu-node\").remove()\n\n\n        this.render_tooltip()\n\n        // Get the nodes and edges\n        this.nodes = this.d3_cluster_data.descendants();\n        this.nodes = this.nodes.sort((a,b) => {return a.x - b.x})\n\n        this.links = this.d3_cluster_data.descendants().slice(1);\n\n\n        // And render them\n        this.render_nodes(source, duration)\n        this.render_edges(source, duration)\n\n\n        if (this.model.settings.first_time_render) {\n            this.model.settings.first_time_render = false\n\n            if (this.container_object.api.settings.phylostratigraphy){\n\n\n                source.children.forEach(element =>\n                    this.container_object.trigger_(\"collapseAll\", element.data, element));\n\n                this.maximise_zoom()\n                this.svg.call(this.zoom.scaleBy, 0.5)\n                this.container_object.history_actions = []\n                this.container_object.undone_actions = []\n\n            }\n\n            else{\n                this.fit_to_viewer_height()\n\n            }\n\n        }\n\n\n    }\n\n    render_tooltip(){\n\n        var idd = \"tooltip\" + this.uid\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\".tooltip\").remove()\n\n        this.tooltip = this.d3.select('body').append(\"div\")\n            .style(\"opacity\", 0)\n            .style(\"position\", 'absolute')\n            .attr(\"class\", \"tooltip\")\n            .attr(\"id\", idd)\n            .style(\"background-color\", \"white\")\n            .style(\"border\", \"solid\")\n            .style(\"border-width\", \"1px\")\n            .style(\"border-radius\", \"5px\")\n            .style(\"padding\", \"10px\")\n\n\n    }\n\n    set_tooltip_text(node){\n\n        var html = \"\";\n\n        if (this.container_object.api.settings.phylostratigraphy){\n\n            if (this.model.settings.stack.has_support && this.model.settings.stack.only_support){\n                var datum = node.data.evolutionaryEvents_support\n            }\n            else {\n                var datum = node.data.evolutionaryEvents\n            }\n\n\n\n            html += `<b># Events</b> <br>`\n            html += `Gains: ${datum.gained} <br>`\n            html += `Duplications: ${datum.duplications} <br>`\n            html += `Losses: ${datum.lost} <br> <br>`\n\n            html += `<b># Genes</b> <br>`\n            html += `Gained: ${datum.gained} <br>`\n            html += `Duplicated: ${datum.duplicated} <br>`\n            html += `Retained: ${datum.retained} <br>`\n            html += `Lost: ${datum.lost} <br>`\n        }\n\n        else {\n            for (var [key, value] of Object.entries(node.data.extended_informations)) {\n\n                if  ((/^-?[\\d]*(\\.[\\d]+)?$/g).test(value)) {\n\n                    if (value % 1 === 0) {\n                        html += `${key}: ${value} <br>`\n                    }\n\n                    else{\n                        //console.log(value)\n                        html += `${key}: ${parseFloat(value).toFixed(3)} <br>`\n                    }\n                }\n                else{\n                    html += `${key}: ${value} <br>`\n                }\n\n\n            }\n        }\n\n        if (this.container_object.api.settings.phylostratigraphy) {\n            html += `<br> <b>Click to open detail page</b>  <br>`\n        }\n\n        this.tooltip.html(html);\n    }\n\n    render_nodes(source, duration){\n\n        var self_render = this;\n        var on_screen_text_size = this.compute_node_font_size()\n        var subsampling_index = -1\n        var subsampling_module = 1 + Math.floor((on_screen_text_size)/this.model.settings.tree.node_vertical_size)\n        var real_node_radius = this.compute_node_radius()\n        var show_duplications = this.model.settings.display_duplication\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n        var deepest_tip = 0;\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        // update x pos with branch length\n        this.nodes.forEach(d => {\n            if (this.model.settings.has_branch_lenght && this.model.settings.use_branch_lenght) {\n                d.y = this.scale_branch_length(d.branch_size)\n            }\n            else{\n                d.y = this.scale_branch_depth(d.depth)\n            }\n\n            if (!this.model.settings.display_leaves){\n                d.subsampled = false;\n                return\n            }\n\n\n            if (!this.model.settings.subsample_label){\n                d.subsampled = true;\n                return\n            }\n\n            if (!d.children ) {\n\n                if (d.data.collapse && d.data.triangle_height >= on_screen_text_size){\n                    d.subsampled  = true\n                    return\n                }\n\n                subsampling_index += 1;\n                d.subsampled = (subsampling_index % subsampling_module === 0) ;\n            }\n\n        })\n\n        // Update the nodes...\n        var node = this.G.selectAll('g.node')\n            .data(this.nodes, d => { return d.ID  || (d.ID = ++this.id_gen); })\n\n        // Enter any new modes at the parent's previous position.\n        var nodeEnter = node.enter().append('g')\n            .attr('class', 'node')\n            .attr(\"id\", d => {return  this.uid + \"_\" + d.ID})\n            .attr(\"transform\", function(d) {\n                return \"translate(\" + mirror_factor*source.y0 + \",\" + source.x0 + \")\";\n            })\n            .on(\"mousedown\", function(d,i) {\n               d.stopPropagation();\n            })\n            .on('mouseover', (d, i) => {\n                if (this.model.settings.show_tooltips){\n\n                    var target = d.target || d.srcElement;\n\n                    if (this.container_object.api.settings.phylostratigraphy && target.nodeName != 'rect' ) {\n                        return\n                    }\n\n                    this.tooltip.transition().duration(50)\n                        .style('display', 'block')\n                        .style('opacity', 0.9)\n                        .style('left', (d.pageX + 12) +  'px')\n                        .style('top', d.pageY  + 'px');\n\n                        this.set_tooltip_text(i);\n\n\n                }\n\n            })\n            .on('mousemove', d => {\n                if (this.model.settings.show_tooltips) {\n                    this.tooltip\n                        .style('left', (d.pageX + 12) + 'px')\n                        .style('top', d.pageY + 'px');\n                }\n            })\n            .on('mouseout', () => {\n                if (this.model.settings.show_tooltips) {\n                    this.tooltip\n                        .style('display', 'none');\n                }\n            });\n\n\n        // Add Circle for the nodes\n        nodeEnter.filter(function(d){\n            return (d.children || d._children)\n        })\n            .append('circle')\n            .attr('class', 'node')\n            .attr('r', 1e-6)\n            .style(\"stroke\",  \"transparent\" )\n            .style(\"stroke-width\",  \"6px\" )\n            .style(\"fill\", function(d) {\n                return d.data.duplication && show_duplications  ? 'red' : d._children ? \"lightsteelblue\" : \"#fff\";\n            })\n        .on('click', (d, i) =>  {\n                if (i.children || i._children) {this.click_nodes(d,i)}\n            })\n\n\n        this.node_face_enter(nodeEnter)\n\n        // create null triangle\n        nodeEnter.append(\"path\")\n            .attr(\"class\", \"triangle\")\n            .style(\"fill\", \"#666\")\n            .attr(\"d\", function (d) {\n                return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n            })\n            .on('click', (d, i) =>  {\n                if (i.children || i._children) {this.click_nodes(d,i)}\n            })\n\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram) {\n            // create null stack\n            nodeEnter.append(\"g\")\n                .attr(\"class\", \"stackGroup\")\n        }\n\n        this.nodeUpdate = nodeEnter.merge(node);\n\n        // Transition to the proper position for the node\n        this.nodeUpdate.transition()\n            .duration(duration)\n            .attr(\"transform\", (d) =>  {\n                return \"translate(\" + mirror_factor*d.y + \",\" + d.x + \")\";\n            });\n\n\n        // Update the node attributes and style\n\n        this.nodeUpdate.select('circle.node')\n            .attr('r', d => d._children || (!this.model.rooted && d.data.root ) ?  1e-6 : real_node_radius )\n            .style(\"fill\",   (d) => {\n                if ( (d.data.duplication && show_duplications)){\n                    return 'red'\n                }\n\n                else if (this.model.settings.style.color_accessor['circle'] !== null) {\n\n\n                    var acc = this.model.settings.style.color_accessor['circle']\n                    var type_acc = this.model.settings.extended_data_type[acc]\n                    var g = d.data.extended_informations[acc]\n\n                    if (type_acc == 'cat'){\n\n                        var cs = this.container_object.api.get_color_scale(acc)\n                        return cs.get_color(g)\n\n                    }\n\n                    else{\n                        return this.model.settings.colorScale['circle'](g)\n                    }\n\n\n\n\n                }\n\n                else {\n                    return '#666'\n                }\n\n\n            })\n            .attr('cursor', 'pointer');\n\n        if (this.blinking > 0)  {\n\n            var BCN_nodes = node.select('circle.node').filter(d => d.data._show_BCN);\n\n            BCN_nodes.style('stroke', 'red')\n                .style('stroke-width', (d) => { return  (2/k) + 'px'})\n\n            // Blinking effect\n            let isVisible = true;\n            const interval = setInterval(() => {\n                isVisible = !isVisible;\n                BCN_nodes.style(\"stroke-opacity\", isVisible ? 1 : 0);\n                this.blinking -= 1;\n\n\n                if (this.blinking <= 0) {\n                    clearInterval(interval); // Stop the interval when blinking reaches 0\n                    BCN_nodes.style(\"stroke-opacity\", 0); // Ensure stroke is visible after stopping\n                }\n\n            }, 750); // Blink every 500ms\n\n\n        }\n\n        this.node_face_update(this.nodeUpdate)\n\n        // Remove any exiting nodes\n        var nodeExit = node.exit().transition()\n            .duration(duration)\n            .attr(\"transform\", function(d) {\n                return \"translate(\" + source.y + \",\" + source.x + \")\";\n            })\n            .remove();\n\n\n        // nullify the triangle\n        nodeExit.select(\"path\")\n            .attr(\"d\", function (d) {\n                return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n            });\n\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram) {\n            // create null stack\n            nodeEnter.selectAll(\"g .stackGroup\").remove()\n        }\n\n\n        // On exit reduce the node circles size to 0\n        nodeExit.select('circle')\n            .attr('r', 1e-6);\n\n        this.node_face_exit(nodeExit)\n\n        // Add collapsed triangle\n        this.nodeUpdate.each((d,i,nodes) => {\n\n            if (d._children) {\n\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]).select(\"path\").transition().duration(duration)\n                    .attr(\"d\",  (d) => {\n\n                        const average = arr => arr.reduce( ( p, c ) => p + c.data.distance_to_root, 0 ) / arr.length;\n\n                        var y = average(self_render.getChildLeaves(d)) -d.data.distance_to_root\n\n                        var y_length = self_render.scale_branch_length(average(self_render.getChildLeaves(d))-d.data.distance_to_root)\n                        var x_length =  self_render.model.settings.tree.node_vertical_size * Math.sqrt(self_render.getChildLeaves(d).length) * collapse_ratio_vertical\n\n\n                       d.data.triangle_height = 2*x_length\n                        d.data.triangle_width = y_length\n\n                        this.node_face_update(d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]) )\n\n\n\n\n                        return \"M\" + 0 + \",\" + 0 + \"L\" + mirror_factor*y_length + \",\" + (-x_length) + \"L\" + mirror_factor*y_length + \",\" + (x_length) + \"L\" + 0 + \",\" + 0;\n                    })\n                    .style('fill', (d) => this.color_triangle(d))\n\n            }\n            if (d.children) {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(nodes[i]).select(\"path\").transition().duration(duration)\n                    .attr(\"d\", function (d) {\n                        d.data.triangle_height = 0\n                        return \"M\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0 + \"L\" + 0 + \",\" + 0;\n                    });\n            }\n        })\n\n        // align to tip\n        this.G.selectAll(\"line.dashed_line\").remove()\n        if (this.model.settings.align_tip) {\n\n            var update_dashed = (d) => {\n\n                this.G.append(\"line\")\n                    .attr(\"class\", \"dashed_line\")\n                    .attr(\"x1\", mirror_factor * d.y)\n                    .attr(\"y1\", d.x)\n                    .attr(\"x2\", mirror_factor * (d.y + d.off_set_to_tip))\n                    .attr(\"y2\", d.x)\n                    .style(\"stroke\", \"white\")\n                    .style(\"stroke-dasharray\", this.compute_edge_width() + ', ' + this.compute_edge_width())\n            }\n\n\n\n            if (this.model.settings.has_branch_lenght && this.model.settings.use_branch_lenght) {\n\n                // update y pos with branch length\n                this.nodes.forEach(d => {\n\n                    var distance_root_to_tip = this.scale_branch_length(d.data.distance_to_root) + (d.data.triangle_width ? d.data.triangle_width : 0);\n\n                    if (deepest_tip < distance_root_to_tip) {\n                        deepest_tip = distance_root_to_tip;\n                    }\n                });\n\n                // Transition to the proper position for the node\n                this.nodeUpdate.transition()\n                    .duration(duration)\n                    .attr(\"transform\", (d) => {\n\n                        if (d.children) {\n                            d.off_set_to_tip = 0;\n                            return \"translate(\" + (mirror_factor * d.y) + \",\" + d.x + \")\";\n                        } else if (d._children) {\n                            d.off_set_to_tip = deepest_tip - this.scale_branch_length(d.data.distance_to_root) - d.data.triangle_width;\n\n                            update_dashed(d)\n\n                            return \"translate(\" + (mirror_factor * (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        } else {\n                            d.off_set_to_tip = deepest_tip - this.scale_branch_length(d.data.distance_to_root);\n\n                            update_dashed(d)\n\n                            return \"translate(\" + (mirror_factor * (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n                    });\n            }\n            else {\n\n                // update y pos with branch length\n                this.nodes.forEach(d => {\n\n                    var distance_root_to_tip = this.scale_branch_depth(d.data.depth) + (d.data.triangle_width ? d.data.triangle_width : 0);\n\n                    if (deepest_tip < distance_root_to_tip) {\n                        deepest_tip = distance_root_to_tip;\n                    }\n                });\n\n                // Transition to the proper position for the node\n                this.nodeUpdate.transition()\n                    .duration(duration)\n                    .attr(\"transform\", (d) => {\n\n                        if (d.children) {\n                            d.off_set_to_tip = 0;\n                            return \"translate(\" + (mirror_factor * d.y) + \",\" + d.x + \")\";\n                        } else if (d._children) {\n                            d.off_set_to_tip = deepest_tip - this.scale_branch_depth(d.data.depth) - d.data.triangle_width;\n\n                            update_dashed(d)\n\n                            return \"translate(\" + (mirror_factor * (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        } else {\n                            d.off_set_to_tip = deepest_tip - this.scale_branch_depth(d.data.depth);\n\n                            update_dashed(d)\n\n                            return \"translate(\" + (mirror_factor * (d.y + d.off_set_to_tip)) + \",\" + d.x + \")\";\n                        }\n                    });\n            }\n        }\n\n\n        // Add Stack\n        if (this.model.settings.has_histogram_data && this.model.settings.show_histogram){\n\n            this.nodeUpdate.filter(function(d){\n                return d.stackData && d.data.depth > 0\n            }).each((d, i, nodes) => {this.render_stack(nodes[i],d)});\n\n        }\n\n\n        // Store the old positions for transition.\n        this.nodes.forEach(function(d){\n            d.x0 = d.x;\n            d.y0 = mirror_factor * d.y;\n        });\n\n\n\n\n\n\n    }\n\n    color_triangle(node_){\n\n        var mean = array => array.reduce((a, b) => a + b) / array.length;\n\n        function mostFrequentElement(array) {\n            var frequencyMap = {};\n            var maxCount = 0;\n            var mostFrequentElement;\n\n            for (var i = 0; i < array.length; i++) {\n                var element = array[i];\n                if (frequencyMap[element] === undefined) {\n                    frequencyMap[element] = 1;\n                } else {\n                    frequencyMap[element]++;\n                }\n\n                if (frequencyMap[element] > maxCount) {\n                    maxCount = frequencyMap[element];\n                    mostFrequentElement = element;\n                }\n            }\n\n            return mostFrequentElement;\n        }\n\n        function removeFalsyValues(array) {\n            return array.filter(Boolean);\n        }\n\n        switch (this.model.settings.selected_triangle_coloring) {\n            case 'Leaves':\n                var acc_l = this.model.settings.style.color_accessor['leaf']\n\n                if (acc_l){\n\n                    var metrics = []\n\n                    this.model.traverse_hierarchy(node_, function(node,children){\n                        if (node.children == null && node._children == null){\n                            metrics.push(node.data.extended_informations[acc_l])\n                        }\n                    })\n\n                    metrics = removeFalsyValues(metrics)\n\n                    var type_l = this.model.settings.extended_data_type[acc_l]\n\n                    switch (type_l){\n                        case 'color':\n                            return mostFrequentElement(metrics)\n                        case 'cat':\n                            return this.model.settings.colorScale['leaf'].get_color(mostFrequentElement(metrics))\n                        case 'num':\n                            return this.model.settings.colorScale['leaf'](mean(metrics.map(Number.parseFloat)))\n                    }\n\n                }\n\n                break;\n\n            case 'Branches':\n                var acc_l = this.model.settings.style.color_accessor['node']\n\n                if (acc_l){\n\n                    var metrics = []\n\n                    this.model.traverse_hierarchy(node_, function(node,children){\n                        if (children){\n                            metrics.push(node.data.extended_informations[acc_l])\n                        }\n                    })\n\n                    metrics = removeFalsyValues(metrics)\n\n                    var type_l = this.model.settings.extended_data_type[acc_l]\n\n                    switch (type_l){\n                        case 'color':\n                            return mostFrequentElement(metrics)\n                        case 'cat':\n                            return this.model.settings.colorScale['node'].get_color(mostFrequentElement(metrics))\n                        case 'num':\n                            return this.model.settings.colorScale['node'](mean(metrics.map(Number.parseFloat)))\n                    }\n\n                }\n\n                break\n        }\n\n        return '#666'\n    }\n\n    render_edges(source, duration){\n\n        var self_render = this;\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n        var real_edges_width = this.compute_edge_width()\n\n        // Update the links...\n        var link = this.G.selectAll('path.link')\n            .data(this.links,  d => { return d.ID  || (d.ID = ++this.id_gen); });\n\n        // Enter any new links at the parent's previous position.\n        var linkEnter = link.enter().insert('path', \"g\")\n            .attr(\"class\", \"link\")\n            .style(\"cursor\",\"pointer\")\n            .style(\"fill\",\"none\")\n            .style('stroke-width',  real_edges_width + 'px'   )\n            .attr('d', d => this.square_edges(\n                {x: source.x0, y: source.y0},{x: source.x0, y: source.y0}))\n\n        var linkUpdate = linkEnter.merge(link);\n\n        var compared_model = this.get_compared_model()\n\n\n        // Transition back to the parent element position\n        linkUpdate.transition()\n            .duration(duration)\n            .style('stroke', (d) => {return this.color_edge(d, compared_model);})\n            .style('stroke-width',  real_edges_width + 'px'  )\n            .attr('d', d => this.square_edges(d, d.parent))\n\n        linkUpdate.on('click', (d,i) =>  {\n            if (this.container_object.api.settings.phylostratigraphy){return}\n            this.click_edges(d,i)})\n\n        // Remove any exiting links\n        var linkExit = link.exit().transition()\n            .duration(duration)\n            .attr('d', d => this.square_edges({x: source.x, y: source.y}, {x: source.x, y: source.y}))\n            .remove();\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('.dashed_line').style('stroke-width',  real_edges_width + 'px')\n\n    }\n\n    get_compared_model(){\n\n        var compared_model = false\n\n        if (this.container_object.api.settings.compareMode && this.container_object.api.bound_container.includes(this.container_object)){\n\n            var con1 = this.container_object.api.bound_container[0]\n            var con2 =  this.container_object.api.bound_container[1]\n\n            var other_container = con1 == this.container_object ? con2 : con1\n\n            if (other_container.models.length > 0 && other_container.viewer.model && this.model.settings.similarity.includes(other_container.viewer.model.uid) ){\n\n                compared_model = other_container.viewer.model.uid\n            }\n\n        }\n\n        return compared_model\n\n    }\n\n    color_edge(edge, compared_model){\n\n        if (edge.data.search_path){ return '#FF0000'}\n\n        else if (this.model.settings.style.color_accessor['node'] === \"Topology\" && compared_model !== false && edge.data.elementS[compared_model]  ) {\n\n            return this.model.settings.colorScale['node'](edge.data.elementS[compared_model])\n        }\n\n        else if (this.model.settings.style.color_accessor['node'] === 'color'){\n\n            var h = edge.data.extended_informations[this.model.settings.style.color_accessor['node']];\n            if (typeof h == \"undefined\" ) {return \"#555\"}\n            else {return h}\n\n        }\n\n        else if (this.model.settings.style.color_accessor['node'] !== null){\n\n            var acc = this.model.settings.style.color_accessor['node']\n\n            var v = edge.data.extended_informations[acc];\n\n\n\n            // check if v is undefined or empty\n            if (typeof v == \"undefined\" || !v ) {return \"#555\"}\n            else {\n                if (this.model.settings.extended_data_type[acc] == 'cat') {\n                    return this.model.settings.colorScale['node'].get_color(v)\n                }\n                else if (this.model.settings.extended_data_type[acc] == 'color') {\n                    return v\n                }\n                else {\n                    return this.model.settings.colorScale['node'](v)\n                }\n            }\n\n        }\n\n        else {\n            return \"#555\"\n        }\n\n    }\n\n\n\n    separate(a, b) {\n\n        var spacer = 1;\n\n        spacer += a._children ? Math.sqrt(this.getChildLeaves(a).length) * collapse_ratio_vertical  : 0\n        spacer += b._children ? Math.sqrt(this.getChildLeaves(b).length) * collapse_ratio_vertical : 0\n\n        return spacer;\n    }\n\n    zoomed({transform}) {\n\n        var zooming = this.model.zoom ? transform.k != this.model.zoom.k : false;\n\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).attr(\"transform\", transform);\n\n        if (this.interface && this.model.settings.use_branch_lenght) {\n            this.interface.update_scale_value(transform.k);\n        }\n\n        if (typeof this.G != \"undefined\" && this.model != false ){\n\n            if ((zooming && !this.model.big_tree) || this.force_zoom_rescaling) {\n\n                var on_screen_text_size = this.compute_node_font_size()\n                var subsampling_index = -1\n                var subsampling_module = 1 + Math.floor((on_screen_text_size)/this.model.settings.tree.node_vertical_size)\n\n                // update x pos with branch length\n                this.nodes.forEach(d => {\n\n\n                    if (!this.model.settings.display_leaves ){\n                        d.subsampled = false;\n                        return\n                    }\n\n                    if (!this.model.settings.subsample_label){\n                        d.subsampled = true;\n                        return\n                    }\n\n\n\n                    if (!d.children ) {\n\n                        if (d.data.collapse && d.data.triangle_height >= on_screen_text_size){\n                            d.subsampled  = true\n                            return\n                        }\n\n                        subsampling_index += 1;\n                        d.subsampled = (subsampling_index % subsampling_module === 0) ;\n                    }\n\n\n                })\n\n\n                var real_node_radius = this.compute_node_radius()\n                this.G.selectAll('g.node').selectAll('circle').attr('r', (d) => {\n\n                    return d.data.collapse || (!this.model.rooted && d.data.root) ? 1e-6 :  real_node_radius }\n                )\n\n                this.node_face_update(this.G.selectAll('g.node'))\n\n                var real_edges_width = this.compute_edge_width()\n                this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n                this.G.selectAll('.dashed_line').style('stroke-width',  real_edges_width + 'px')\n\n\n\n            }\n\n            this.model.store_zoomTransform(transform)\n\n\n\n\n            // if lock zoom activate\n            if (this.container_object.api.settings.compareMode && this.container_object.api.settings.sync_zoom && !this.container_object.api.settings.syncing_zoom){\n\n                this.container_object.api.settings.syncing_zoom = true\n\n                var other_container = this.container_object.api.bound_container[0] === this.container_object ? this.container_object.api.bound_container[1] : this.container_object.api.bound_container[0]\n\n                if (other_container.models.length > 0 && other_container.viewer.model != false){\n\n                    var m1 = this.get_height_hierarchy().middle*transform.k\n                    var m2 = other_container.viewer.get_height_hierarchy().middle*transform.k\n\n                    other_container.viewer.set_zoom(transform.k,transform.x,transform.y -m2 + m1 )\n\n                }\n                this.container_object.api.settings.syncing_zoom = false\n\n\n\n            }\n\n\n\n\n        }\n\n\n    }\n\n    square_edges(s, d) {\n\n        var mirror_factor = this.model.settings.mirror ? -1 : 1\n\n\n        if (!this.model.settings.align_tip || isNaN(s.off_set_to_tip) ){\n            return   \"M\" + mirror_factor*s.y + \",\" + s.x + \"L\" + mirror_factor*d.y + \",\" + s.x + \"L\" + mirror_factor*d.y + \",\" + d.x;\n\n        }\n        else {\n            return \"M\" + (mirror_factor * (s.y +  s.off_set_to_tip)) + \",\" + s.x + \"L\" + mirror_factor * d.y + \",\" + s.x + \"L\" + mirror_factor * d.y  + \",\" + d.x;\n        }\n    }\n\n    click_nodes(event, node) {\n\n        var menu = []\n\n        // phylostratigraphy mode\n        if (this.container_object.api.settings.phylostratigraphy && event.target.tagName === 'rect'){\n\n            this.container_object.api.settings.callback_stack_redirection(node.data.taxid,node.parent.data.taxid);\n            return\n\n        }\n\n         // Default mode\n        else {\n            if  (node.parent != null){\n\n                var menu = [\n                    {\n                        title: node.data.collapse ? 'Expand' : 'Collapse node' ,\n                        action: () =>  {this.container_object.trigger_(\"collapse\", node.data, node)}\n                    },\n                    {\n                        title: 'Collapse All' ,\n                        action: () =>  {this.container_object.trigger_(\"collapseAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Expand All' ,\n                        action: () =>  {this.container_object.trigger_(\"expandAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Swap subtrees' ,\n                        action: () =>  {this.container_object.trigger_(\"swap\", node.data, node)}\n                    },\n                    {\n                        title: node.data.force_label_show == null || node.data.force_label_show ? 'Hide label'  : 'Show label' ,\n                        action: () =>  {this.container_object.trigger_(\"force_show_label\", node.data, node)}\n                    }\n                ]\n            }\n            else { // root\n                var menu = [\n                    {\n                        title: 'Expand All' ,\n                        action: () =>  {this.container_object.trigger_(\"expandAll\", node.data, node)}\n                    },\n                    {\n                        title: 'Swap subtrees' ,\n                        action: () =>  {this.container_object.trigger_(\"swap\", node.data, node)}\n                    },\n\n                ]\n            }\n\n            if (this.container_object.api.settings.compareMode && this.container_object.api.bound_container.includes(this.container_object)){\n\n                menu.push({\n                    title: 'Highlight BCN' ,\n                    action: () =>  {this.container_object.trigger_(\"BCN\", node.data, node)}\n                })\n\n            }\n\n            if (this.container_object.api.settings.phylostratigraphy){\n\n                menu.push({\n                    title: 'Open genome page' ,\n                    action:  () =>  {this.container_object.api.settings.callback_ancestral_genome_redirection(node.data.taxid)}\n                })\n\n            }\n\n\n        }\n\n\n\n\n        menu.push({\n            title: 'Close' ,\n            action: () =>  {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n            }\n        })\n\n        var t = this.d3.zoomTransform(this.svg.node())\n\n        let div_i = this.container_object.div_id;\n\n        let py = document.getElementById(div_i).offsetTop\n        let px = document.getElementById(div_i).offsetLeft\n\n        var xy = t.invert([event.pageX-px,event.pageY-py]);\n\n        if(this.model.settings.mirror){\n            var x=  -xy[0]\n            var y = xy[1]\n        }\n        else{\n            var x=  xy[0]\n            var y = xy[1]\n        }\n\n        this.create_menu_click(menu, x,y,event,node)\n\n    }\n\n    click_edges(event,edge) {\n\n        var t = this.d3.zoomTransform(this.svg.node())\n\n        let div_i = this.container_object.div_id;\n\n        let py = document.getElementById(div_i).offsetTop\n        let px = document.getElementById(div_i).offsetLeft\n\n        var xy = t.invert([event.pageX-px,event.pageY-py]);\n\n        // because Chrome returns a MouseEvent for d3.event while Firefox returns a click. \\o/\n        var node_from_event = event.path ? event.path[0].__data__ : event.target.__data__\n\n\n\n        var menu = [{\n            title: 'Reroot' ,\n            action: () =>  {\n                this.container_object.trigger_(\"reroot\", node_from_event.data)\n            }\n        }, {\n                title: 'Trim subtree' ,\n                action: () =>  {\n                    this.container_object.trigger_(\"trim\", node_from_event)\n                }\n            },{\n            title: 'Open as new tree' ,\n            action: () =>  {\n                this.container_object.create_model_from_hierarchy_node(node_from_event);\n                this.container_object.shift_model(this.container_object.models.length - 1 - this.container_object.current_model);\n                this.fit_to_viewer_height()\n\n            }\n        },\n            {\n            title: 'Close' ,\n            action: () =>  {\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n            }\n        }]\n\n        if(this.model.settings.mirror){\n            var x=  -xy[0]\n            var y = xy[1]\n        }\n        else{\n            var x=  xy[0]\n            var y = xy[1]\n        }\n\n        this.create_menu_click(menu,x,y, event, edge)\n    }\n\n    create_menu_click(menu, x ,y, event, e){\n\n        if (this.model.settings.mirror){\n            x=-x;\n        }\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#menu-node\").remove()\n\n        /* build context menu */\n        var m = this.G.append(\"g\")\n        m.style('display', 'none');\n        m.attr('id', 'menu-node');\n\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        var fs = 14/k // scaled font size\n        var vps = 12/k // scaled vertical margin\n        var hps = 10/k // scaled horizontal margin\n        var rs = 8/k // scaled radius size\n\n        var r = m.append('rect')\n            .attr('height', menu.length * (fs+vps) + vps + 'px')\n            .style('fill', \"#eee\")\n            .attr('rx', rs)\n            .attr('ry', rs)\n\n        var gg = m.selectAll('menu_item')\n            .data(menu)\n            .enter()\n            .append('g')\n            gg.attr('cursor', 'pointer')\n            .attr('transform', function(d, i) {\n                return 'translate(' + hps + ',' + ((i + 1) * (fs+vps)) + ')';\n            })\n            .on('mouseover', function(d){\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(this).style('fill', 'steelblue');\n            })\n            .on('mouseout', function(d){\n                d3__WEBPACK_IMPORTED_MODULE_0__.select(this).style('fill', 'black');\n            })\n            .on('click', function(d,i){\n                i.action(d);\n            })\n\n        var close = null\n\n        var t = gg.append('text')\n            .attr('cursor', 'pointer')\n            .attr(\"font-weight\", (d) =>  {\n                return d.title === \"Close\" ? 900 : 400\n            })\n            .style('font-size', d => {\n                return  fs + 'px';\n            })\n            .text(function(d) {\n                return d.title;\n            })\n\n\n        r.attr('width', 20 );\n        m.attr('transform', 'translate(' + x  + ',' + y  + ')');\n        m.style('display', 'block');\n        m.datum(event);\n\n\n\n        setTimeout(function(){\n\n            var w = 0;\n            var w_close = 0\n\n            t.each(function(d){\n\n                var l = d3__WEBPACK_IMPORTED_MODULE_0__.select(this).node().getComputedTextLength();\n                if (l > w) w = l;\n\n                if (d.title == \"Close\"){\n                    w_close = l;\n                }\n\n            })\n\n            var w_menu = w + 2*hps\n            r.attr('width', w_menu );\n\n            t.each(function(d){\n                if (d.title == \"Close\"){\n                    d3__WEBPACK_IMPORTED_MODULE_0__.select(this).attr('transform', 'translate(' + (w - w_close)/2  + ',' + 0  + ')');\n                }\n            })\n\n\n        }, 50)\n\n\n\n\n\n    }\n\n    apply_show_label_from_data_to_d3(data, d){\n        d.force_label_show = data.force_label_show\n    }\n\n    apply_collapse_from_data_to_d3(data, d){\n        if (data.collapse && d.children != null ) {\n            d._children = d.children;\n            d.children = null;\n        }\n        else if (data.collapse == false && d._children != null) {\n            d.children = d._children;\n            d._children = null;\n\n        }\n\n    }\n\n    apply_collapseAll_from_data_to_d3(data, root_node){\n\n        var  node = root_node  , nodes = [node], children, i, index = -1;\n\n        while (node = nodes.pop()) {\n\n\n            this.apply_collapse_from_data_to_d3(node.data, node)\n\n\n            if (children = node.children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n            if (children = node._children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n        }\n\n    }\n\n    apply_expandAll_from_data_to_d3(data, root_node){\n\n        var  node = root_node  , nodes = [node], children, i, index = -1;\n\n        while (node = nodes.pop()) {\n\n            this.apply_collapse_from_data_to_d3(node.data, node)\n\n            if (children = node.children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n            if (children = node._children) {\n                for (i = children.length - 1; i >= 0; --i) {\n                    nodes.push(children[i]);\n                }\n            }\n\n        }\n\n    }\n\n    apply_swap_from_data_to_d3(data, d){\n\n        var e = d.children.pop()\n        d.children.unshift(e)\n\n    }\n\n    apply_unswap_from_data_to_d3(data, d){\n\n        var e = d.children.shift()\n        d.children.push(e)\n\n    }\n\n    set_zoom(k,x,y) {\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.select('#svg' + this.uid )\n            .call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(x,y).scale(k) );\n    }\n\n    get_height_hierarchy(){\n\n\n        var max_x = 0;\n        var min_x = 9999999999;\n\n        this.hierarchy.each(d => {\n\n            if(d.x > max_x){max_x= d.x}\n            if(d.x < min_x){min_x= d.x}\n        }\n        );\n\n\n        return {\n            'h':max_x - min_x,\n            'max_x':max_x ,\n            'min_x': min_x,\n            'middle': max_x -(max_x - min_x)/2\n        }\n\n    }\n\n    get_number_visible_tree_tips_at_depth(depth){\n\n        var tips = 0;\n\n        this.model.traverse(this.model.data, function(node,children){\n\n            if (node.depth > depth) {return}\n\n            if (children == null || node.collapse == true) {\n                tips+=1\n            }\n            } )\n\n        return tips\n\n    }\n\n    maximise_zoom(){\n\n        var old_zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n\n\n\n        // Adjust Zoom-y to fit height\n        var r = this.get_height_hierarchy()\n        var vh = this.height - this.settings.style.offset_top_fit\n        var th = (Math.abs(r.min_x)+Math.abs(r.max_x))\n        var h_scale = vh/th // ratio\n\n\n\n        if (this.model.settings.mirror){\n            var x_tr = this.width - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n        else{\n            var x_tr = - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n\n        var off_rooting = (Math.abs(r.min_x)-Math.abs(r.max_x))/2\n        var y_tr =  -this.hierarchy.y + this.height/2 + off_rooting*h_scale\n        this.set_zoom(h_scale, x_tr, y_tr)\n\n\n        var w = 0\n\n        this.hierarchy.leaves().forEach((e) => {\n            let posy = e.y\n            if (e.data.collapse){\n                posy += e.data.triangle_width\n            }\n            w = posy > w ? posy : w\n        })\n\n        var ns = this.model.settings.tree.node_horizontal_size\n        var w_scale = (this.width - 80)/(w*h_scale)\n\n        this.container_object.modify_node_size('horizontal', (ns * w_scale) - ns )\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n        this.G.selectAll('.dashed_line').style('stroke-width',  real_edges_width + 'px')\n\n        var undo = {'name': 'Revert Zoom', 'fonction_obj': this, 'fonct':  this.render_with_settings, 'argu': [old_zoom.k, old_zoom.x,old_zoom.y,this.model.settings.tree.node_horizontal_size, []]}\n        var redo = {'name': 'Stretch tree', 'fonction_obj': this, 'fonct':  this.render_with_settings, 'argu': [h_scale, x_tr, y_tr,ns, []] }\n        this.container_object.add_action(undo, redo, true)\n\n    }\n\n    fit_to_viewer_height(){\n\n        var collapsed = this.model.get_all_collapse(this.model.data)\n        var old_zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n\n\n\n\n        // Increment Collapsed Depth until \"Visible leaf\" > \"Max visible leaves\"\n        var depth;\n        for (depth = 1; depth < this.model.settings.tree.max_depth; depth++) {\n\n            var X = this.get_number_visible_tree_tips_at_depth(depth)\n            if (X > this.settings.max_visible_leaves) {\n                break\n            }\n        }\n\n        this.update_collapse_level(depth, true)\n\n\n        var r = this.get_height_hierarchy()\n        var estimated_height = r.h\n\n        // Adjust Zoom-y to fit height\n        var vh = this.height - this.settings.style.offset_top_fit // MARGIN\n        var th = (Math.abs(r.min_x)+Math.abs(r.max_x))\n        //var th = estimated_height // this.G.node().getBBox().height\n        var h_scale = vh/th\n\n\n        if (this.model.settings.mirror){\n            var x_tr = this.width - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n        else{\n            var x_tr = - this.hierarchy.x +  this.settings.style.translate_top_fit\n        }\n\n        var off_rooting = (Math.abs(r.min_x)-Math.abs(r.max_x))/2\n        var y_tr =  -this.hierarchy.y + this.height/2 + off_rooting*h_scale\n        //var y_tr =  (this.height/2) - this.hierarchy.y - (r.min_x + (r.max_x - r.min_x)/2)/2\n\n        this.set_zoom(h_scale, x_tr, y_tr)\n\n\n        var w = 0\n\n\n        this.hierarchy.leaves().forEach((e) => {\n\n            let posy = e.y\n\n            if (e.data.collapse){\n                posy += e.data.triangle_width\n            }\n\n            w = posy > w ? posy : w\n        })\n\n\n        var ns = this.model.settings.tree.node_horizontal_size\n        var w_scale = (this.width - 80)/(w*h_scale)\n\n        this.container_object.modify_node_size('horizontal', (ns * w_scale) - ns )\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n        this.G.selectAll('.dashed_line').style('stroke-width',  real_edges_width + 'px')\n\n        var undo = {'name': 'Uncompact tree', 'fonction_obj': this, 'fonct':  this.render_with_settings, 'argu': [old_zoom.k, old_zoom.x,old_zoom.y,this.model.settings.tree.node_horizontal_size, collapsed]}\n        var redo = {'name': 'Compact tree', 'fonction_obj': this, 'fonct':  this.fit_to_viewer_height, 'argu': [] }\n        this.container_object.add_action(undo, redo, true)\n\n\n\n\n\n    }\n\n    render_with_settings(scale, x,y,node_size, collapsed){\n\n        if (collapsed.length > 0){\n            this.model.apply_collapse_to_list(collapsed)\n            this.set_data(this.model)\n            this.render(this.hierarchy)\n        }\n\n        this.set_zoom(scale, x, y)\n\n        var delta_node_size = -(this.model.settings.tree.node_horizontal_size - node_size)\n\n        if (delta_node_size!=0){\n            this.container.modify_node_size('horizontal',  -(this.model.settings.tree.node_horizontal_size - node_size)    )\n        }\n\n        var real_edges_width = this.compute_edge_width()\n        this.G.selectAll('path.link').style('stroke-width',  real_edges_width + 'px')\n        this.G.selectAll('.dashed_line').style('stroke-width',  real_edges_width + 'px')\n\n    }\n\n    // TUNNING todo should be in Controller\n    /*\n    modify_node_size(axis, variation){\n\n        if (axis === 'vertical') {\n            if ((this.model.settings.tree.node_vertical_size + variation) <= 0){return}\n            this.model.settings.tree.node_vertical_size += variation\n            //this.interface.update_slider(this.interface.slider_v, this.model.settings.tree.node_vertical_size)\n        }\n        else if (axis === 'horizontal') {\n            if ((this.model.settings.tree.node_horizontal_size + variation) <= 0){return}\n            this.model.settings.tree.node_horizontal_size += variation\n            //this.interface.update_slider(this.interface.slider_h, this.model.settings.tree.node_horizontal_size)\n        }\n\n        this.d3_cluster.nodeSize([ this.model.settings.tree.node_vertical_size,this.model.settings.tree.node_horizontal_size])\n        this.build_d3_cluster()\n        this.render(this.hierarchy)\n\n\n        if (this.interface && this.model.settings.use_branch_lenght) {\n           var k = this.d3.zoomTransform(d3.select(\"#master_g\" + this.uid).node()).k\n            this.interface.update_scale_value(k);\n        }\n\n    }\n\n     */\n\n    toggle_use_length(){\n        this.model.settings.use_branch_lenght = !this.model.settings.use_branch_lenght\n\n        if (!this.model.settings.use_branch_lenght){this.interface.remove_scale()}\n        else{this.interface.add_scale()}\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n        this.maximise_zoom()\n    }\n\n    toggle_align_tip(){\n        this.model.settings.align_tip = !this.model.settings.align_tip\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_mirror(){\n        this.model.settings.mirror = !this.model.settings.mirror\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n        var zoom = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node())\n            this.set_zoom(zoom.k,this.width-zoom.x,zoom.y)\n\n\n    }\n\n    toggle_internal_label(){\n\n        this.model.settings.display_internal_label = !this.model.settings.display_internal_label\n        this.render(this.hierarchy)\n    }\n\n    toggle_duplication(){\n        this.model.settings.display_duplication = !this.model.settings.display_duplication\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_leaves(){\n        this.model.settings.display_leaves = !this.model.settings.display_leaves\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_node_labels(){\n        this.model.settings.display_nodes_labels = !this.model.settings.display_nodes_labels\n        this.render(this.hierarchy)\n\n    }\n\n\n\n    toggle_tooltips(){\n        this.model.settings.show_tooltips = !this.model.settings.show_tooltips\n        this.render(this.hierarchy)\n\n    }\n\n    toggle_triangle_name(){\n        this.model.settings.use_internal_node_name_for_triangles = !this.model.settings.use_internal_node_name_for_triangles\n        this.render(this.hierarchy)\n\n    }\n\n\n\n    toggle_subsample(){\n        this.model.settings.subsample_label = !this.model.settings.subsample_label\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        if(this.model.settings.subsample_label){\n            this.model.settings.tree.font_size = this.model.settings.tree.font_size*k\n        }\n        else{\n            this.model.settings.tree.font_size = this.model.settings.tree.font_size/k\n        }\n\n        this.render(this.hierarchy)\n\n        //this.interface.update_slider(this.interface.slider_t, this.model.settings.tree.font_size)\n\n    }\n\n    toggle_multiple_search(){\n        this.model.settings.multiple_search = !this.model.settings.multiple_search\n    }\n\n    toggle_sync_coloring(){\n        this.model.settings.sync_coloring = !this.model.settings.sync_coloring;\n\n        var acc = this.model.settings.style.color_accessor['node']\n        this.model.settings.style.color_accessor['leaf'] = acc\n\n        if (this.model.settings.style.color_extent_min['node'][acc] !=100000){\n            this.model.settings.style.color_extent_max['leaf'][acc] = this.model.settings.style.color_extent_max['node'][acc]\n            this.model.settings.style.color_extent_min['leaf'][acc] = this.model.settings.style.color_extent_min['node'][acc]\n        }\n\n        else {\n            this.model.settings.style.color_extent_max['node'][acc] = this.model.settings.style.color_extent_max['leaf'][acc]\n            this.model.settings.style.color_extent_min['node'][acc] = this.model.settings.style.color_extent_min['leaf'][acc]\n\n        }\n\n        this.container_object.interface = new _interface_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](this, this.container_object)\n        this.interface.open_color_settings()\n\n\n    }\n\n    toggle_use_meta_for_leaf(){\n        this.model.settings.use_meta_for_leaf = !this.model.settings.use_meta_for_leaf\n    }\n\n    toggle_use_meta_for_node(){\n        this.model.settings.use_meta_for_node = !this.model.settings.use_meta_for_node\n    }\n\n\n    // stack\n\n    toggle_only_support(){\n\n        this.model.settings.stack.only_support = !this.model.settings.stack.only_support\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    toggle_show_stack_number(){\n        if (this.model.settings.stack.showHistogramValues){\n            this.model.settings.stack.showHistogramValues = false\n        }\n        else{\n            this.model.settings.stack.showHistogramValues = true\n        }\n\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    toggle_height_max_ratio(){\n        if (this.model.settings.stack.maxStackHeight === 'max'){\n            this.model.settings.stack.maxStackHeight = 'ratio'\n        }\n        else{\n            this.model.settings.stack.maxStackHeight = 'max'\n        }\n\n\n        this.build_d3_data()\n        this.render(this.hierarchy)\n\n    }\n\n    update_stack_height(val){\n        this.model.settings.stack.stackHeight = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_width(val){\n        this.model.settings.stack.stackWidth = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_font(val){\n        this.model.settings.stack.legendTxtSize = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n    update_stack_type(val){\n        this.model.settings.stack.type = val\n        this.build_d3_data()\n        this.render(this.hierarchy)\n    }\n\n\n    update_collapse_level(val, refresh_interface){\n\n        var refresh_interface = (typeof refresh_interface !== 'undefined') ? refresh_interface : true;\n\n\n        this.model.settings.collapse_level = val\n        this.container_object.collapse_depth(this.model.settings.collapse_level, this.model.data)\n        //this.set_data(this.model, refresh_interface)\n        this.build_d3_cluster()\n        this.render(this.hierarchy)\n\n        if (refresh_interface){\n            this.interface = new _interface_js__WEBPACK_IMPORTED_MODULE_1__[\"default\"](this, this.container_object)\n        }\n        else{\n            var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n            if (this.interface && this.model.settings.use_branch_lenght){\n                this.interface.update_scale_value(k);\n            }\n\n        }\n\n\n\n    }\n\n\n\n    toggle_dessimode(){\n        this.model.settings.dessimode = !this.model.settings.dessimode\n\n        if (this.model.settings.dessimode) {\n\n            var r= Math.floor(Math.random() * 101);\n\n            if (r > 50) {alert(\"[Common] If I may just give a little feedback... [ following 1200 lines truncated]\")}\n            else if (r > 10) {alert(\"[Rare] If I may just give a little feedback... [ following 6800 lines truncated]\")}\n            else{alert(\"[Lengendary] Have you heard about banana and human genome similarity,?\")}\n\n\n        }\n    }\n\n    // HELPER\n    getChildren(d) {\n        return d._children ? d._children : (d.children ? d.children : []);\n    }\n\n    getChildLeaves(d) {\n\n        if (d.children || d._children) {\n            var leaves = [];\n            var children = this.getChildren(d);\n            for (var i = 0; i < children.length; i++) {\n                leaves = leaves.concat(this.getChildLeaves(children[i]));\n            }\n            return leaves;\n        } else {\n            return [d];\n        }\n    }\n\n    get_random_node(){\n        var ns = []\n        this.hierarchy.each(d => ns.push(d));\n        return ns[Math.floor(Math.random() * ns.length)];\n    }\n\n    // UTILS\n    centerNode(source) {\n\n        //this.svg.transition().call(this.zoom.translateTo, source.y0,source.x0)\n        this.svg.transition().call(this.zoom.transform, d3__WEBPACK_IMPORTED_MODULE_0__.zoomIdentity.translate(this.width/2-source.y0,this.height/2-source.x0).scale(1) )\n\n    }\n\n    zoom_in(){\n        this.svg.transition().call(this.zoom.scaleBy, 2)\n    }\n\n    zoom_out(){\n        this.svg.transition().call(this.zoom.scaleBy, 0.5)\n    }\n\n    zoom_by(val){\n        this.svg.transition().call(this.zoom.scaleBy, val)\n    }\n\n    // STACK\n    render_stack(d,e){\n\n        var ms = this.model.settings.stack\n\n        var data = (ms.has_support && ms.only_support ) ? e.stackData_support[ms.type] : e.stackData[ms.type];\n\n\n        var stackGroup  = this.d3.select(d);\n\n\n\n        var xDistanceFromNode =  parseInt(ms.xInitialRightMargin) + parseInt(ms.stackWidth)\n        var txtDistanceFromBar = parseInt(ms.stackWidth) + parseInt(ms.margin)\n\n        if (ms.showHistogramValues) {\n\n            var legends = stackGroup.selectAll(\".legendtxt\")\n                .data(data)\n                .enter()\n                .append(\"text\")\n                .classed(\"legendtxt\", true)\n                .text(function (d) {\n                    return d[0].realsize !== 0 ? d[0].realsize : \"\";\n                }).attr(\"x\", function () {\n                    return (0 - xDistanceFromNode) + txtDistanceFromBar;\n                }).attr(\"y\", function (d) {\n                    // TODO adjust based on feedback\n                    if(d[0].y0 < 0){\n                        // legend below zero line\n                        return parseInt(ms.legendTxtSize)+2;\n                    }\n\n                    // if bar height smaller than text size, put text on bottom\n                    if(d[0].y < parseInt(ms.legendTxtSize) && d[0].y0 > 0) {\n                        return -(d[0].y0 - d[0].y);\n                    }\n\n                    // center legend text vertically with some extra padding\n                    return -(d[0].y0 - ((d[0].y + parseInt(ms.legendTxtSize))/2));\n                }).attr(\"font-size\", parseInt(ms.legendTxtSize)).attr(\"stroke\", \"black\")\n\n        }\n        if (ms.showHistogramValues) { // todo shulld be showHistogramSummaryValue\n\n            var summaryLegend = stackGroup.selectAll(\".stackGroup\")\n                .data(function (d) {\n                    return [d];\n                })\n                .enter()\n                .append(\"text\")\n                .classed(\"legendsummarytxt\", true)\n                .text(function (d) {\n                    if (ms.has_support && ms.only_support){\n                        var summary_number = ms.type === \"genes\" ? d.data.nr_hogs_support : d.numberEvents_; // todo add nr_proteins and  numberEvents\n                    }\n                    else{\n                        var summary_number = ms.type === \"genes\" ? d.data.nr_hogs : d.numberEvents; // todo add nr_proteins and  numberEvents\n                    }\n\n                    return summary_number > 0 && typeof summary_number == 'number' ? summary_number : \"\";\n                }).attr(\"x\", function () {\n                    return 0 - (xDistanceFromNode + 30)\n                }).attr(\"y\", function (d) {\n                    return 0 - ms.margin;\n                }).attr(\"font-size\", parseInt(ms.legendTxtSize)).attr(\"stroke\", \"black\")\n\n        }\n\n        var stackSlices = stackGroup.selectAll(\"rect\")\n            .data(data)\n            .enter()\n            .append(\"rect\");\n\n        var slices = stackSlices\n            .style(\"fill\", (d,i,node) => { return this.settings.stack.colorMap[d[0].sizelbl]\n            })\n            .style(\"opacity\", 0.8)\n            .attr(\"y\", function (d) {\n                return 0 - d[0].y0 - 0.5;\n            })\n            .attr(\"x\", function (d) {\n                return 0 - xDistanceFromNode;\n            })\n            .attr(\"height\", function (d) {\n                return d[0].size\n            })\n            .attr(\"width\", ms.stackWidth)\n\n        d3__WEBPACK_IMPORTED_MODULE_0__.selectAll(\".stackGroup\").moveToFront();\n\n\n\n    }\n\n    compute_color_map_stack(){\n\n        var l = this.settings.stack.labels\n        var c = this.settings.stack.colors\n\n        var colMap =  c.reduce(function(colMap, col, index) {\n\n            colMap[l[index]] = col;\n            return colMap;\n        }, {})\n\n        return colMap\n\n    }\n\n    getStackNormalizer(d, type){\n\n        var ms = this.model.settings.stack\n\n        var max_genome = (ms.has_support && ms.only_support) ? this.model.largestGenome_support : this.model.largestGenome\n        var max_event = (ms.has_support && ms.only_support) ? this.model.largestGenome_support : this.model.largestGenome\n\n\n        if(type === 'genes' || !type){\n\n            if(ms.maxStackHeight === \"max\" && max_genome > 0){\n                var normalizer = ms.stackHeight / max_genome;\n            } else if(Number.isInteger(ms.maxStackHeight)){\n                var normalizer = ms.maxStackHeight / (d.retained + d.duplicated + d.gained + Math.abs(d.lost));\n            } else {\n                var normalizer = ms.stackHeight / (d.retained + d.duplicated + d.gained + Math.abs(d.lost));\n            }\n\n        } else {\n\n            if(ms.maxStackHeight === \"max\" && max_event > 0){\n                var normalizer = ms.stackHeight / max_event;\n            } else if(Number.isInteger(ms.maxStackHeight)){\n                var normalizer = m.maxStackHeight / (d.duplications + d.gained + Math.abs(d.lost));\n            } else {\n                var normalizer = ms.stackHeight / (d.duplications + d.gained + Math.abs(d.lost));\n            }\n\n        }\n\n        return normalizer;\n\n    }\n\n    barStack(seriesDataAll, type, only_support = false) {\n\n        var data;\n\n        if(type === 'genes' || !type) {\n            data = [[{}], [{}], [{}], [{}]];\n        } else {\n            data = [[{}], [{}], [{}]];\n        }\n\n        var size = 0;\n        if (only_support){\n            var d = seriesDataAll.data.evolutionaryEvents_support;\n        }\n        else{\n            var d = seriesDataAll.data.evolutionaryEvents;\n        }\n\n        var posBase = 0; // positive base\n        var stackIndex = 0;\n        var seriesIndex = 0;\n\n        var normalizer = this.getStackNormalizer(d, type);\n\n        /* in case there's no eveolutionary events */\n        normalizer = !isFinite(normalizer) ? 1 : normalizer;\n\n        if (typeof d.gained == 'undefined'){\n            d.gained = 0\n        }\n\n        if (typeof d.gained == 'undefined'){\n            d.gained = 0\n        }\n\n        if (typeof d.retained == 'undefined'){\n            d.retained = 0\n        }\n\n        if (typeof d.duplicated == 'undefined'){\n            d.duplicated = 0\n        }\n\n        if (typeof d.duplications == 'undefined'){\n            d.duplications = 0\n        }\n\n        if (typeof d.lost == 'undefined'){\n            d.lost = 0\n        }\n\n\n\n\n\n\n        var realSize;\n        var StackSizeretained = (d.retained) ? stackScale(d.retained, normalizer) : 0;\n        var StackSizeDuplicated = (d.duplicated) ? stackScale(d.duplicated, normalizer) : 0;\n        var StackSizeDuplication = (d.duplications) ? stackScale(d.duplications, normalizer) : 0;\n        var StackSizeGained = (d.gained) ? stackScale(d.gained, normalizer) : 0;\n        var StackSizeLost = (d.lost) ? stackScale(d.lost, normalizer) : 0;\n        var posStackSize = StackSizeGained + StackSizeDuplicated + StackSizeretained;\n\n        if(type === 'genes' || !type){\n\n            realSize = Math.abs(d.retained) > 0 ? Math.abs(d.retained) : 0;\n            var posBase = posBase + StackSizeretained;\n            data[stackIndex][seriesIndex] = new seriesElement('Retained', realSize, StackSizeretained, posBase, posStackSize)\n            stackIndex++;\n\n            realSize = Math.abs(d.duplicated);\n            var posBase = posBase + StackSizeDuplicated\n            data[stackIndex][seriesIndex] = new seriesElement('Duplicated', realSize, StackSizeDuplicated, posBase, posStackSize)\n            stackIndex++;\n        } else {\n\n            realSize = Math.abs(d.duplications);\n            var posBase = posBase + StackSizeDuplication\n            data[stackIndex][seriesIndex] = new seriesElement('Duplications', realSize, StackSizeDuplication, posBase, posStackSize)\n            stackIndex++;\n        }\n\n        realSize = Math.abs(d.gained);\n        var posBase = posBase + StackSizeGained\n        data[stackIndex][seriesIndex] = new seriesElement('Gained', realSize, StackSizeGained, posBase, posStackSize)\n        stackIndex++;\n        realSize = Math.abs(d.lost);\n        /* move lost down a little to make it easier to hover it and not the node line */\n        data[stackIndex][seriesIndex] = new seriesElement('Lost', realSize, StackSizeLost, -1, posStackSize)\n\n        function seriesElement(sizeLbl, realSize, size, y0, posStackSize){\n            this.sizelbl = sizeLbl\n            this.realsize = realSize\n            this.size = Math.abs(size)\n            this.y = size\n            this.y0 = y0\n            this.posStackSize = posStackSize;\n        }\n\n        function stackScale(val, normalizer){\n            return val * normalizer;\n        }\n\n        data.extent = d3__WEBPACK_IMPORTED_MODULE_0__.extent(\n            d3__WEBPACK_IMPORTED_MODULE_0__.merge(\n                d3__WEBPACK_IMPORTED_MODULE_0__.merge(\n                    data.map(function(e) {\n                        return e.map(function(f) {\n                            return [f.y0, f.y0 - f.size]\n                        })\n                    })\n                )\n            )\n        )\n\n        return data;\n    }\n\n    isOdd(num) { return num % 2;}\n\n    compute_node_font_size(internal=false){\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        if (!this.model.settings.subsample_label && !internal){\n           k=1\n        }\n\n        if (internal){\n            var fs =  this.model.settings.style.font_size_internal/k ;\n        }\n        else {\n            var fs =  this.model.settings.tree.font_size/k ;\n        }\n\n        return fs\n\n        /*\n        if (d._children && fs > d.data.triangle_height){\n            fs = d.data.triangle_height\n        }\n\n        var max_leave = this.model.settings.tree.node_vertical_size*k\n\n        if (!d.children && !d._children && fs > max_leave){\n            fs = max_leave\n        }\n\n        return fs+ \"px\"\n\n\n         */\n    }\n\n    compute_node_radius(){\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n        var nr =  this.model.settings.tree.node_radius/k ;\n        return (nr > this.model.settings.tree.node_vertical_size/2) ? this.model.settings.tree.node_vertical_size/2 : nr\n    }\n\n    compute_edge_width(){\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n        var ew = this.model.settings.tree.line_width/k;\n        return (ew > this.model.settings.tree.node_vertical_size/2) ? this.model.settings.tree.node_vertical_size/2 : ew\n    }\n\n    get_label_extended_information(node, type){\n\n\n        if (type == 'Topology'){\n\n            var topo = node.data.elementS[this.get_compared_model()]\n\n            return topo ? topo.toFixed(2) : ''\n\n        }\n\n        return (type == 'Name') ? node.data.name :  node.data.extended_informations[type]\n    }\n\n    node_face_enter(nodeEnter){\n\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n        var on_screen_text_size = this.compute_node_font_size()\n        var show_node_face = this.model.settings.display_nodes_labels !== false\n        var show_lt = show_node_face ?  this.model.settings.display_internal_label_left_top !== false: false\n        var show_lb = show_node_face ? this.model.settings.display_internal_label_left_bottom !== false : false\n        var mirror_factor = this.model.settings.mirror ? true : false;\n\n\n        var show_ltl = this.model.settings.display_leaf_label_left_top !== false\n        var show_lbl = this.model.settings.display_leaf_label_left_bottom !== false\n\n\n\n        // Add labels for the nodes\n        nodeEnter.append('text')\n            .attr(\"class\", \"right\")\n            .attr(\"dy\", \".35em\")\n            .style('cursor', 'pointer')\n            .style('font-size', d => {\n\n                var collapse_text = false\n                if (d.data.collapse){\n                    collapse_text = d.data.triangle_height >= on_screen_text_size + 'px' ? true : false\n                }\n\n                return d.subsampled || collapse_text   ? on_screen_text_size : '0px' ;\n            })\n            .attr(\"font-weight\", (d) =>  {\n                return  400\n                //return d.children || d._children ? 900 : 400\n            })\n            .attr('fill', (d) => {\n                return \"#212529\";\n            })\n            .attr(\"y\", (d) => {\n                if (d.parent == null){return 0}\n                else if (d.children || d._children){\n                    if (d.children && this.isOdd(d.children.length)){\n                        return 13\n                    }\n                    if (d._children && this.isOdd(d._children.length)){\n                        return 13 // todo internal name offsetted if collapse\n                    }\n                    return 0\n                }\n                return 0\n            })\n            .attr(\"x\", function(d) {\n                var scale = (d.children || d._children) ? 1 : k\n                return d.parent == null || mirror_factor ? -13/scale : 13/scale;\n            })\n            .attr(\"text-anchor\", function(d) {\n                return d.parent == null || mirror_factor ? \"end\" : \"start\"; // todo better deal with internal name\n            })\n            .text(function(d) { return d.data.name; })\n            .on('click', (d,i) => {\n             if (i.children == null && i._children == null){\n\n                 this.interface.add_modal_edit_label(i, 'Default');\n                 $('#exampleModal_edit').modal('show');\n\n             }\n\n         });\n\n\n        // INTERNAL LABELS\n\n        nodeEnter.filter(function(d) { return (d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_top\")\n            .attr(\"dy\", \".35em\")\n            //.attr(\"alignment-baseline\", \"ideographic\" )\n            .style('font-size', d => {\n                return show_lt ? this.model.settings.style.font_size_internal + 'px' : '0px' ;\n            })\n            .attr(\"font-weight\", (d) =>  {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return -13\n            })\n            .attr(\"x\", function(d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function(d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n\n        nodeEnter.filter(function(d) { return (d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_bottom\")\n            .attr(\"dy\", \".35em\")\n            //.attr(\"alignment-baseline\", \"hanging\" )\n            .style('font-size', d => {\n                return show_lb ? this.model.settings.style.font_size_internal + 'px': '0px' ;\n            })\n            .attr(\"font-weight\", (d) => {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return 13\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function (d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n\n\n\n        // LEAVES LABELS\n\n        nodeEnter.filter(function(d) { return !(d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_top_leaf\")\n            .attr(\"dy\", \".35em\")\n            .style('font-size', d => {\n                return show_ltl ? this.model.settings.style.font_size_internal + 'px' : '0px' ;\n            })\n            .attr(\"font-weight\", (d) =>  {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return -13\n            })\n            .attr(\"x\", function(d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function(d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n\n        nodeEnter.filter(function(d) { return !(d.children || d._children); })\n            .append('text')\n            .attr(\"class\", \"left_bottom_leaf\")\n            .attr(\"dy\", \".35em\")\n            //.attr(\"alignment-baseline\", \"hanging\" )\n            .style('font-size', d => {\n                return show_lbl ? this.model.settings.style.font_size_internal + 'px': '0px' ;\n            })\n            .attr(\"font-weight\", (d) => {\n                return 400\n            })\n            .attr(\"y\", (d) => {\n                return 13\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8 : -8;\n            })\n            .attr(\"text-anchor\", function (d) {\n\n                return mirror_factor ? \"start\" : \"end\"\n            })\n            .text( (d) => {\n                return \"\";\n            })\n    }\n\n    get_color_label(d){\n\n        var acc = this.model.settings.style.color_accessor['leaf']\n        var type_acc = this.model.settings.extended_data_type[acc]\n\n\n        if (type_acc === 'color'){\n\n            var g = d.data.extended_informations[acc];\n\n            if (typeof g !== \"undefined\" ) {\n                return g\n            }\n\n\n        }\n\n        else if (acc !== null){\n\n            var v = d.data.extended_informations[acc];\n\n            if (typeof v !== \"undefined\" ) {\n\n                if (type_acc == 'cat'){\n\n                    var cs = this.container_object.api.get_color_scale(acc)\n                    return cs.get_color(v)\n\n                }\n\n                else{\n                    return this.model.settings.colorScale['leaf'](v)\n                }\n\n\n            }\n\n\n        }\n\n    }\n\n    node_face_update(nodes){\n\n        var on_screen_text_size = this.compute_node_font_size()\n        var on_screen_text_size_int = this.compute_node_font_size(true)\n        var k = this.d3.zoomTransform(d3__WEBPACK_IMPORTED_MODULE_0__.select(\"#master_g\" + this.uid).node()).k\n\n\n        var show_node_face = this.model.settings.display_nodes_labels !== false\n        var show_r = show_node_face ? this.model.settings.display_internal_label !== false : false\n        var show_lt = show_node_face ?  this.model.settings.display_internal_label_left_top !== false: false\n        var show_lb = show_node_face ? this.model.settings.display_internal_label_left_bottom !== false : false\n\n        var mirror_factor = this.model.settings.mirror;\n\n\n        var show_rl = this.model.settings.display_leaf_label !== false\n        var show_ltl = this.model.settings.display_leaf_label_left_top !== false\n        var show_lbl = this.model.settings.display_leaf_label_left_bottom !== false\n\n\n        nodes.select('text.right')\n            .text((d) => {\n                if (d.children || d._children){\n\n                    if (d.data.collapse){\n\n                        if (this.container_object.api.settings.phylostratigraphy){\n                            return d.data.name\n                        }\n\n                        if (this.model.settings.use_internal_node_name_for_triangles && d.data.name != ''){\n                            return d.data.name\n                        }\n\n                        let l = d.data.leaves\n\n                        if (l.length <= 0){\n                            d.data.leaves = this.model.get_leaves(d.data)\n                        }\n\n                        return '[' + l[0].name + ' ... ' +  l[l.length-1].name + ']'\n                    }\n\n\n                    if (d.data.force_label_show == false){\n                        return '';\n                    }\n                    \n                    return show_r || d.data.force_label_show ? this.get_label_extended_information(d, this.model.settings.display_internal_label) : '';\n                }\n\n                if (show_rl && this.model.settings.display_leaf_label !== 'Default'){\n                    return this.get_label_extended_information(d, this.model.settings.display_leaf_label)\n                }\n                return d.data.name;\n            })\n            .attr(\"x\", function(d) {\n                let y_offset = (typeof d.data.triangle_width !== 'undefined') ? d.data.triangle_width : 0;\n\n                var scale = k //(d.children || d._children) ? 1 : k\n\n                if (mirror_factor){\n                    return  -(y_offset + 13/scale);\n                }\n\n                return d.parent == null ? -13/scale : y_offset + 13/scale;\n            })\n            .attr(\"y\", 0)\n            .attr('fill', (d) => {\n\n                if (!(d.children || d._children)){\n\n                    return this.get_color_label(d)\n\n                }\n\n                let c =  d.data.search_node ? \"#FF0000\"  : \"#212529\";\n\n                if (d.data.collapse){\n                    return this.color_triangle(d)\n                }\n\n\n\n                return c\n            })\n            .style('font-size', d => {if (d.children){\n                if (d.data.force_label_show == false){\n                    return '0px';\n                }\n                    return show_r || d.data.force_label_show ? on_screen_text_size_int + 'px' : '0px';\n                } return d.subsampled   ? on_screen_text_size + 'px' : '0px' ;}\n            )\n            .on('click', (d,i) => {\n                if (i.children == null && i._children == null){\n\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_leaf_label);\n                    $('#exampleModal_edit').modal('show');\n\n                }\n\n                else {\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_internal_label);\n                    $('#exampleModal_edit').modal('show');\n                }\n\n            });\n\n\n\n\n        // INTERNAL LABELS\n\n        nodes.select('text.left_top')\n            .style('font-size', d => {\n                if (d.data.force_label_show == false){\n                    return '0px';\n                }\n                return show_lt || d.data.force_label_show ? on_screen_text_size_int+ 'px' : '0px';\n            })\n            .text( (d) => {\n                if (d.data.force_label_show == false){\n                    return '';\n                }\n                return show_lt || d.data.force_label_show ? this.get_label_extended_information(d, this.model.settings.display_internal_label_left_top) : '';\n            })\n            .attr(\"y\", (d) => {\n                return -13 /k\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8/k : -8/k;\n            })\n            .on('click', (d,i) => {\n\n\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_internal_label_left_top);\n                    $('#exampleModal_edit').modal('show');\n\n\n            });\n\n        nodes.select('text.left_bottom')\n            .style('font-size', d => {\n                if (d.data.force_label_show == false){\n                    return '0px';\n                }\n                return show_lb || d.data.force_label_show ? on_screen_text_size_int + 'px' : '0px';\n            })\n            .text( (d) => {\n                if (d.data.force_label_show == false){\n                    return '';\n                }\n                return show_lb || d.data.force_label_show ? this.get_label_extended_information(d, this.model.settings.display_internal_label_left_bottom): '';\n            })\n            .attr(\"y\", (d) => {\n                return 13 /k\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8/k : -8/k;\n            })\n            .on('click', (d,i) => {\n\n\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_internal_label_left_bottom);\n                    $('#exampleModal_edit').modal('show');\n\n\n\n            });\n\n        // LEAVES LABELS\n\n        nodes.select('text.left_top_leaf')\n            .style('font-size', d => {\n                return show_ltl ? on_screen_text_size_int+ 'px' : '0px';\n            })\n            .text( (d) => {\n                return show_ltl ? this.get_label_extended_information(d, this.model.settings.display_leaf_label_left_top) : '';\n            })\n            .attr(\"y\", (d) => {\n                return -13 /k\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8/k : -8/k;\n            })\n            .on('click', (d,i) => {\n\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_leaf_label_left_top);\n                    $('#exampleModal_edit').modal('show');\n\n\n\n            });\n\n        nodes.select('text.left_bottom_leaf')\n            .style('font-size', d => {\n                return show_lbl ? on_screen_text_size_int + 'px' : '0px';\n            })\n            .text( (d) => {\n                return show_lbl ? this.get_label_extended_information(d, this.model.settings.display_leaf_label_left_bottom): '';\n            })\n            .attr(\"y\", (d) => {\n                return 13 /k\n            })\n            .attr(\"x\", function (d) {\n                return mirror_factor ? 8/k : -8/k;\n            })\n            .on('click', (d,i) => {\n\n\n                    this.interface.add_modal_edit_label(i, this.model.settings.display_leaf_label_left_bottom);\n                    $('#exampleModal_edit').modal('show');\n\n\n\n            });\n    }\n\n    node_face_exit(nodeExit){\n\n        // On exit reduce the opacity of text labels\n        nodeExit.select('text')\n            .style('fill-opacity', 1e-6);\n    }\n\n\n\n};\n\n\n\n\n//# sourceURL=webpack://PhyloIO/./src/viewer.js?");
 
 /***/ }),
 
@@ -8956,6 +8854,9 @@ eval("module.exports = JSON.parse('{\"2.16.840.1.101.3.4.1.1\":\"aes-128-ecb\",\
 /******/ 		return module.exports;
 /******/ 	}
 /******/ 	
+/******/ 	// expose the modules object (__webpack_modules__)
+/******/ 	__webpack_require__.m = __webpack_modules__;
+/******/ 	
 /************************************************************************/
 /******/ 	/* webpack/runtime/compat get default export */
 /******/ 	(() => {
@@ -8981,6 +8882,15 @@ eval("module.exports = JSON.parse('{\"2.16.840.1.101.3.4.1.1\":\"aes-128-ecb\",\
 /******/ 		};
 /******/ 	})();
 /******/ 	
+/******/ 	/* webpack/runtime/get javascript chunk filename */
+/******/ 	(() => {
+/******/ 		// This function allow to reference async chunks
+/******/ 		__webpack_require__.u = (chunkId) => {
+/******/ 			// return url for filenames based on template
+/******/ 			return "" + chunkId + ".phylo.js";
+/******/ 		};
+/******/ 	})();
+/******/ 	
 /******/ 	/* webpack/runtime/global */
 /******/ 	(() => {
 /******/ 		__webpack_require__.g = (function() {
@@ -9023,6 +8933,32 @@ eval("module.exports = JSON.parse('{\"2.16.840.1.101.3.4.1.1\":\"aes-128-ecb\",\
 /******/ 		__webpack_require__.p = "";
 /******/ 	})();
 /******/ 	
+/******/ 	/* webpack/runtime/jsonp chunk loading */
+/******/ 	(() => {
+/******/ 		__webpack_require__.b = document.baseURI || self.location.href;
+/******/ 		
+/******/ 		// object to store loaded and loading chunks
+/******/ 		// undefined = chunk not loaded, null = chunk preloaded/prefetched
+/******/ 		// [resolve, reject, Promise] = chunk loading, 0 = chunk loaded
+/******/ 		var installedChunks = {
+/******/ 			"main": 0
+/******/ 		};
+/******/ 		
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+/******/ 		
+/******/ 		// no HMR manifest
+/******/ 		
+/******/ 		// no on chunks loaded
+/******/ 		
+/******/ 		// no jsonp function
+/******/ 	})();
+/******/ 	
 /******/ 	/* webpack/runtime/nonce */
 /******/ 	(() => {
 /******/ 		__webpack_require__.nc = undefined;
@@ -9034,7 +8970,7 @@ eval("module.exports = JSON.parse('{\"2.16.840.1.101.3.4.1.1\":\"aes-128-ecb\",\
 /******/ 	// Load entry module and return exports
 /******/ 	// This entry module can't be inlined because the eval devtool is used.
 /******/ 	var __webpack_exports__ = __webpack_require__("./src/index.js");
-/******/ 	PhyloIO = __webpack_exports__;
+/******/ 	module.exports.PhyloIO = __webpack_exports__;
 /******/ 	
 /******/ })()
 ;