phenoml 14.0.0 → 16.0.0

package/dist/esm/api/resources/summary/resources/templates/client/Client.mjs

@@ -0,0 +1,329 @@
+// This file was auto-generated by Fern from our API Definition.
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import { normalizeClientOptionsWithAuth } from "../../../../../../BaseClient.mjs";
+import { mergeHeaders } from "../../../../../../core/headers.mjs";
+import * as core from "../../../../../../core/index.mjs";
+import * as environments from "../../../../../../environments.mjs";
+import { handleNonStatusCodeError } from "../../../../../../errors/handleNonStatusCodeError.mjs";
+import * as errors from "../../../../../../errors/index.mjs";
+import * as phenoml from "../../../../../index.mjs";
+export class TemplatesClient {
+    constructor(options = {}) {
+        this._options = normalizeClientOptionsWithAuth(options);
+    }
+    /**
+     * Retrieves all summary templates for the authenticated user
+     *
+     * @param {TemplatesClient.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.summary.UnauthorizedError}
+     * @throws {@link phenoml.summary.InternalServerError}
+     *
+     * @example
+     *     await client.summary.templates.list()
+     */
+    list(requestOptions) {
+        return core.HttpResponsePromise.fromPromise(this.__list(requestOptions));
+    }
+    __list(requestOptions) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
+            const _authRequest = yield this._options.authProvider.getAuthRequest();
+            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
+            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
+                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, "fhir2summary/templates"),
+                method: "GET",
+                headers: _headers,
+                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
+                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
+                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
+                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
+                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
+                logging: this._options.logging,
+            });
+            if (_response.ok) {
+                return {
+                    data: _response.body,
+                    rawResponse: _response.rawResponse,
+                };
+            }
+            if (_response.error.reason === "status-code") {
+                switch (_response.error.statusCode) {
+                    case 401:
+                        throw new phenoml.summary.UnauthorizedError(_response.error.body, _response.rawResponse);
+                    case 500:
+                        throw new phenoml.summary.InternalServerError(_response.error.body, _response.rawResponse);
+                    default:
+                        throw new errors.phenomlError({
+                            statusCode: _response.error.statusCode,
+                            body: _response.error.body,
+                            rawResponse: _response.rawResponse,
+                        });
+                }
+            }
+            return handleNonStatusCodeError(_response.error, _response.rawResponse, "GET", "/fhir2summary/templates");
+        });
+    }
+    /**
+     * Creates a summary template from an example using LLM function calling
+     *
+     * @param {phenoml.summary.CreateSummaryTemplateRequest} request
+     * @param {TemplatesClient.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.summary.BadRequestError}
+     * @throws {@link phenoml.summary.UnauthorizedError}
+     * @throws {@link phenoml.summary.InternalServerError}
+     *
+     * @example
+     *     await client.summary.templates.create({
+     *         name: "Discharge Summary",
+     *         example_summary: "Patient John Doe, age 45, was admitted on 2024-01-10 with Type 2 Diabetes. Discharged on 2024-01-15 with Metformin 500mg BID.",
+     *         target_resources: ["Patient", "Condition", "MedicationRequest"],
+     *         mode: "narrative"
+     *     })
+     */
+    create(request, requestOptions) {
+        return core.HttpResponsePromise.fromPromise(this.__create(request, requestOptions));
+    }
+    __create(request, requestOptions) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
+            const _authRequest = yield this._options.authProvider.getAuthRequest();
+            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
+            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
+                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, "fhir2summary/template"),
+                method: "POST",
+                headers: _headers,
+                contentType: "application/json",
+                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
+                requestType: "json",
+                body: request,
+                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
+                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
+                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
+                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
+                logging: this._options.logging,
+            });
+            if (_response.ok) {
+                return {
+                    data: _response.body,
+                    rawResponse: _response.rawResponse,
+                };
+            }
+            if (_response.error.reason === "status-code") {
+                switch (_response.error.statusCode) {
+                    case 400:
+                        throw new phenoml.summary.BadRequestError(_response.error.body, _response.rawResponse);
+                    case 401:
+                        throw new phenoml.summary.UnauthorizedError(_response.error.body, _response.rawResponse);
+                    case 500:
+                        throw new phenoml.summary.InternalServerError(_response.error.body, _response.rawResponse);
+                    default:
+                        throw new errors.phenomlError({
+                            statusCode: _response.error.statusCode,
+                            body: _response.error.body,
+                            rawResponse: _response.rawResponse,
+                        });
+                }
+            }
+            return handleNonStatusCodeError(_response.error, _response.rawResponse, "POST", "/fhir2summary/template");
+        });
+    }
+    /**
+     * Retrieves a specific summary template
+     *
+     * @param {string} id - Template ID
+     * @param {TemplatesClient.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.summary.UnauthorizedError}
+     * @throws {@link phenoml.summary.ForbiddenError}
+     * @throws {@link phenoml.summary.NotFoundError}
+     * @throws {@link phenoml.summary.InternalServerError}
+     *
+     * @example
+     *     await client.summary.templates.get("id")
+     */
+    get(id, requestOptions) {
+        return core.HttpResponsePromise.fromPromise(this.__get(id, requestOptions));
+    }
+    __get(id, requestOptions) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
+            const _authRequest = yield this._options.authProvider.getAuthRequest();
+            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
+            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
+                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir2summary/template/${core.url.encodePathParam(id)}`),
+                method: "GET",
+                headers: _headers,
+                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
+                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
+                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
+                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
+                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
+                logging: this._options.logging,
+            });
+            if (_response.ok) {
+                return { data: _response.body, rawResponse: _response.rawResponse };
+            }
+            if (_response.error.reason === "status-code") {
+                switch (_response.error.statusCode) {
+                    case 401:
+                        throw new phenoml.summary.UnauthorizedError(_response.error.body, _response.rawResponse);
+                    case 403:
+                        throw new phenoml.summary.ForbiddenError(_response.error.body, _response.rawResponse);
+                    case 404:
+                        throw new phenoml.summary.NotFoundError(_response.error.body, _response.rawResponse);
+                    case 500:
+                        throw new phenoml.summary.InternalServerError(_response.error.body, _response.rawResponse);
+                    default:
+                        throw new errors.phenomlError({
+                            statusCode: _response.error.statusCode,
+                            body: _response.error.body,
+                            rawResponse: _response.rawResponse,
+                        });
+                }
+            }
+            return handleNonStatusCodeError(_response.error, _response.rawResponse, "GET", "/fhir2summary/template/{id}");
+        });
+    }
+    /**
+     * Updates an existing summary template
+     *
+     * @param {string} id - Template ID
+     * @param {phenoml.summary.UpdateSummaryTemplateRequest} request
+     * @param {TemplatesClient.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.summary.BadRequestError}
+     * @throws {@link phenoml.summary.UnauthorizedError}
+     * @throws {@link phenoml.summary.ForbiddenError}
+     * @throws {@link phenoml.summary.NotFoundError}
+     * @throws {@link phenoml.summary.InternalServerError}
+     *
+     * @example
+     *     await client.summary.templates.update("id", {
+     *         name: "Discharge Summary",
+     *         template: "Patient {{Patient.name[0].text}} was discharged on {{Encounter[0].period.end}} with {{MedicationRequest[0].medicationCodeableConcept.coding[0].display}} {{MedicationRequest[0].dosageInstruction[0].text}}.",
+     *         target_resources: ["Patient", "Encounter", "MedicationRequest"],
+     *         mode: "narrative"
+     *     })
+     */
+    update(id, request, requestOptions) {
+        return core.HttpResponsePromise.fromPromise(this.__update(id, request, requestOptions));
+    }
+    __update(id, request, requestOptions) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
+            const _authRequest = yield this._options.authProvider.getAuthRequest();
+            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
+            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
+                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir2summary/template/${core.url.encodePathParam(id)}`),
+                method: "PUT",
+                headers: _headers,
+                contentType: "application/json",
+                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
+                requestType: "json",
+                body: request,
+                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
+                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
+                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
+                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
+                logging: this._options.logging,
+            });
+            if (_response.ok) {
+                return {
+                    data: _response.body,
+                    rawResponse: _response.rawResponse,
+                };
+            }
+            if (_response.error.reason === "status-code") {
+                switch (_response.error.statusCode) {
+                    case 400:
+                        throw new phenoml.summary.BadRequestError(_response.error.body, _response.rawResponse);
+                    case 401:
+                        throw new phenoml.summary.UnauthorizedError(_response.error.body, _response.rawResponse);
+                    case 403:
+                        throw new phenoml.summary.ForbiddenError(_response.error.body, _response.rawResponse);
+                    case 404:
+                        throw new phenoml.summary.NotFoundError(_response.error.body, _response.rawResponse);
+                    case 500:
+                        throw new phenoml.summary.InternalServerError(_response.error.body, _response.rawResponse);
+                    default:
+                        throw new errors.phenomlError({
+                            statusCode: _response.error.statusCode,
+                            body: _response.error.body,
+                            rawResponse: _response.rawResponse,
+                        });
+                }
+            }
+            return handleNonStatusCodeError(_response.error, _response.rawResponse, "PUT", "/fhir2summary/template/{id}");
+        });
+    }
+    /**
+     * Deletes a summary template
+     *
+     * @param {string} id - Template ID
+     * @param {TemplatesClient.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.summary.UnauthorizedError}
+     * @throws {@link phenoml.summary.ForbiddenError}
+     * @throws {@link phenoml.summary.NotFoundError}
+     * @throws {@link phenoml.summary.InternalServerError}
+     *
+     * @example
+     *     await client.summary.templates.delete("id")
+     */
+    delete(id, requestOptions) {
+        return core.HttpResponsePromise.fromPromise(this.__delete(id, requestOptions));
+    }
+    __delete(id, requestOptions) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
+            const _authRequest = yield this._options.authProvider.getAuthRequest();
+            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
+            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
+                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir2summary/template/${core.url.encodePathParam(id)}`),
+                method: "DELETE",
+                headers: _headers,
+                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
+                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
+                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
+                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
+                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
+                logging: this._options.logging,
+            });
+            if (_response.ok) {
+                return {
+                    data: _response.body,
+                    rawResponse: _response.rawResponse,
+                };
+            }
+            if (_response.error.reason === "status-code") {
+                switch (_response.error.statusCode) {
+                    case 401:
+                        throw new phenoml.summary.UnauthorizedError(_response.error.body, _response.rawResponse);
+                    case 403:
+                        throw new phenoml.summary.ForbiddenError(_response.error.body, _response.rawResponse);
+                    case 404:
+                        throw new phenoml.summary.NotFoundError(_response.error.body, _response.rawResponse);
+                    case 500:
+                        throw new phenoml.summary.InternalServerError(_response.error.body, _response.rawResponse);
+                    default:
+                        throw new errors.phenomlError({
+                            statusCode: _response.error.statusCode,
+                            body: _response.error.body,
+                            rawResponse: _response.rawResponse,
+                        });
+                }
+            }
+            return handleNonStatusCodeError(_response.error, _response.rawResponse, "DELETE", "/fhir2summary/template/{id}");
+        });
+    }
+}

package/dist/esm/api/resources/summary/resources/templates/client/requests/index.d.mts

@@ -0,0 +1,2 @@
+export type { CreateSummaryTemplateRequest } from "./CreateSummaryTemplateRequest.mjs";
+export type { UpdateSummaryTemplateRequest } from "./UpdateSummaryTemplateRequest.mjs";

package/dist/esm/api/resources/summary/resources/templates/exports.d.mts

@@ -0,0 +1,2 @@
+export { TemplatesClient } from "./client/Client.mjs";
+export * from "./client/index.mjs";

package/dist/esm/api/resources/{authtoken/resources/auth → summary/resources/templates}/exports.mjs

@@ -1,3 +1,3 @@
 // This file was auto-generated by Fern from our API Definition.
-export { AuthClient } from "./client/Client.mjs";
+export { TemplatesClient } from "./client/Client.mjs";
 export * from "./client/index.mjs";

package/dist/esm/api/resources/{authtoken/resources/auth → summary/resources/templates}/index.d.mts

@@ -1 +1,2 @@
 export * from "./client/index.mjs";
+export * from "./types/index.mjs";

package/dist/esm/api/resources/{authtoken/resources/auth → summary/resources/templates}/index.mjs

@@ -1 +1,2 @@
 export * from "./client/index.mjs";
+export * from "./types/index.mjs";

package/dist/esm/api/resources/summary/resources/templates/types/TemplatesDeleteResponse.d.mts

@@ -0,0 +1,4 @@
+export interface TemplatesDeleteResponse {
+    success?: boolean | undefined;
+    message?: string | undefined;
+}

package/dist/esm/api/resources/summary/resources/templates/types/TemplatesGetResponse.d.mts

@@ -0,0 +1,5 @@
+import type * as phenoml from "../../../../../index.mjs";
+export interface TemplatesGetResponse {
+    success?: boolean | undefined;
+    template?: phenoml.summary.SummaryTemplate | undefined;
+}

package/dist/esm/api/resources/summary/{types/SummaryListTemplatesResponse.d.mts → resources/templates/types/TemplatesListResponse.d.mts}

@@ -1,5 +1,5 @@
-import type * as phenoml from "../../../index.mjs";
-export interface SummaryListTemplatesResponse {
+import type * as phenoml from "../../../../../index.mjs";
+export interface TemplatesListResponse {
     success?: boolean | undefined;
     templates?: phenoml.summary.SummaryTemplate[] | undefined;
 }

package/dist/esm/api/resources/summary/{types/SummaryUpdateTemplateResponse.d.mts → resources/templates/types/TemplatesUpdateResponse.d.mts}

@@ -1,5 +1,5 @@
-import type * as phenoml from "../../../index.mjs";
-export interface SummaryUpdateTemplateResponse {
+import type * as phenoml from "../../../../../index.mjs";
+export interface TemplatesUpdateResponse {
     success?: boolean | undefined;
     message?: string | undefined;
     template?: phenoml.summary.SummaryTemplate | undefined;

package/dist/esm/api/resources/summary/resources/templates/types/index.d.mts

@@ -0,0 +1,4 @@
+export * from "./TemplatesDeleteResponse.mjs";
+export * from "./TemplatesGetResponse.mjs";
+export * from "./TemplatesListResponse.mjs";
+export * from "./TemplatesUpdateResponse.mjs";

package/dist/esm/api/resources/summary/resources/templates/types/index.mjs

@@ -0,0 +1,4 @@
+export * from "./TemplatesDeleteResponse.mjs";
+export * from "./TemplatesGetResponse.mjs";
+export * from "./TemplatesListResponse.mjs";
+export * from "./TemplatesUpdateResponse.mjs";

package/dist/esm/api/resources/summary/types/index.d.mts

@@ -1,7 +1,3 @@
 export * from "./CreateSummaryResponse.mjs";
 export * from "./CreateSummaryTemplateResponse.mjs";
-export * from "./SummaryDeleteTemplateResponse.mjs";
-export * from "./SummaryGetTemplateResponse.mjs";
-export * from "./SummaryListTemplatesResponse.mjs";
 export * from "./SummaryTemplate.mjs";
-export * from "./SummaryUpdateTemplateResponse.mjs";

package/dist/esm/api/resources/summary/types/index.mjs

@@ -1,7 +1,3 @@
 export * from "./CreateSummaryResponse.mjs";
 export * from "./CreateSummaryTemplateResponse.mjs";
-export * from "./SummaryDeleteTemplateResponse.mjs";
-export * from "./SummaryGetTemplateResponse.mjs";
-export * from "./SummaryListTemplatesResponse.mjs";
 export * from "./SummaryTemplate.mjs";
-export * from "./SummaryUpdateTemplateResponse.mjs";

package/dist/esm/api/resources/tools/resources/mcpServer/resources/index.d.mts

@@ -1,2 +1 @@
-export * from "./tools/client/requests/index.mjs";
 export * as tools from "./tools/index.mjs";

package/dist/esm/api/resources/tools/resources/mcpServer/resources/index.mjs

@@ -1,2 +1 @@
-export * from "./tools/client/requests/index.mjs";
 export * as tools from "./tools/index.mjs";

package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/Client.d.mts

@@ -55,25 +55,4 @@ export declare class ToolsClient {
      */
     delete(mcp_server_tool_id: string, requestOptions?: ToolsClient.RequestOptions): core.HttpResponsePromise<phenoml.tools.McpServerToolResponse>;
     private __delete;
-    /**
-     * Calls a MCP server tool
-     *
-     * @param {string} mcp_server_tool_id - ID of the MCP server tool to call
-     * @param {phenoml.tools.mcpServer.McpServerToolCallRequest} request
-     * @param {ToolsClient.RequestOptions} requestOptions - Request-specific configuration.
-     *
-     * @throws {@link phenoml.tools.BadRequestError}
-     * @throws {@link phenoml.tools.UnauthorizedError}
-     * @throws {@link phenoml.tools.ForbiddenError}
-     * @throws {@link phenoml.tools.InternalServerError}
-     *
-     * @example
-     *     await client.tools.mcpServer.tools.call("mcp_server_tool_id", {
-     *         arguments: {
-     *             "title": "PhenoML Agent API"
-     *         }
-     *     })
-     */
-    call(mcp_server_tool_id: string, request: phenoml.tools.mcpServer.McpServerToolCallRequest, requestOptions?: ToolsClient.RequestOptions): core.HttpResponsePromise<phenoml.tools.McpServerToolCallResponse>;
-    private __call;
 }

package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/Client.mjs

@@ -181,72 +181,4 @@ export class ToolsClient {
             return handleNonStatusCodeError(_response.error, _response.rawResponse, "DELETE", "/tools/mcp-server/tool/{mcp_server_tool_id}");
         });
     }
-    /**
-     * Calls a MCP server tool
-     *
-     * @param {string} mcp_server_tool_id - ID of the MCP server tool to call
-     * @param {phenoml.tools.mcpServer.McpServerToolCallRequest} request
-     * @param {ToolsClient.RequestOptions} requestOptions - Request-specific configuration.
-     *
-     * @throws {@link phenoml.tools.BadRequestError}
-     * @throws {@link phenoml.tools.UnauthorizedError}
-     * @throws {@link phenoml.tools.ForbiddenError}
-     * @throws {@link phenoml.tools.InternalServerError}
-     *
-     * @example
-     *     await client.tools.mcpServer.tools.call("mcp_server_tool_id", {
-     *         arguments: {
-     *             "title": "PhenoML Agent API"
-     *         }
-     *     })
-     */
-    call(mcp_server_tool_id, request, requestOptions) {
-        return core.HttpResponsePromise.fromPromise(this.__call(mcp_server_tool_id, request, requestOptions));
-    }
-    __call(mcp_server_tool_id, request, requestOptions) {
-        return __awaiter(this, void 0, void 0, function* () {
-            var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k;
-            const _authRequest = yield this._options.authProvider.getAuthRequest();
-            const _headers = mergeHeaders(_authRequest.headers, (_a = this._options) === null || _a === void 0 ? void 0 : _a.headers, requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.headers);
-            const _response = yield ((_b = this._options.fetcher) !== null && _b !== void 0 ? _b : core.fetcher)({
-                url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `tools/mcp-server/tool/${core.url.encodePathParam(mcp_server_tool_id)}/call`),
-                method: "POST",
-                headers: _headers,
-                contentType: "application/json",
-                queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
-                requestType: "json",
-                body: request,
-                timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
-                maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
-                abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
-                fetchFn: (_k = this._options) === null || _k === void 0 ? void 0 : _k.fetch,
-                logging: this._options.logging,
-            });
-            if (_response.ok) {
-                return {
-                    data: _response.body,
-                    rawResponse: _response.rawResponse,
-                };
-            }
-            if (_response.error.reason === "status-code") {
-                switch (_response.error.statusCode) {
-                    case 400:
-                        throw new phenoml.tools.BadRequestError(_response.error.body, _response.rawResponse);
-                    case 401:
-                        throw new phenoml.tools.UnauthorizedError(_response.error.body, _response.rawResponse);
-                    case 403:
-                        throw new phenoml.tools.ForbiddenError(_response.error.body, _response.rawResponse);
-                    case 500:
-                        throw new phenoml.tools.InternalServerError(_response.error.body, _response.rawResponse);
-                    default:
-                        throw new errors.phenomlError({
-                            statusCode: _response.error.statusCode,
-                            body: _response.error.body,
-                            rawResponse: _response.rawResponse,
-                        });
-                }
-            }
-            return handleNonStatusCodeError(_response.error, _response.rawResponse, "POST", "/tools/mcp-server/tool/{mcp_server_tool_id}/call");
-        });
-    }
 }

package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/index.d.mts

@@ -1 +1 @@
-export * from "./requests/index.mjs";
+export {};

package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/index.mjs

@@ -1 +1 @@
-export * from "./requests/index.mjs";
+export {};

package/dist/esm/api/resources/tools/types/index.d.mts

@@ -5,6 +5,5 @@ export * from "./Lang2FhirAndSearchResponse.mjs";
 export * from "./McpServer.mjs";
 export * from "./McpServerResponse.mjs";
 export * from "./McpServerTool.mjs";
-export * from "./McpServerToolCallResponse.mjs";
 export * from "./McpServerToolResponse.mjs";
 export * from "./SearchConcept.mjs";

package/dist/esm/api/resources/tools/types/index.mjs

@@ -5,6 +5,5 @@ export * from "./Lang2FhirAndSearchResponse.mjs";
 export * from "./McpServer.mjs";
 export * from "./McpServerResponse.mjs";
 export * from "./McpServerTool.mjs";
-export * from "./McpServerToolCallResponse.mjs";
 export * from "./McpServerToolResponse.mjs";
 export * from "./SearchConcept.mjs";

package/dist/esm/api/resources/workflows/client/Client.d.mts

@@ -13,7 +13,7 @@ export declare class WorkflowsClient {
     /**
      * Retrieves all workflow definitions for the authenticated user
      *
-     * @param {phenoml.workflows.WorkflowsListRequest} request
+     * @param {phenoml.workflows.ListRequest} request
      * @param {WorkflowsClient.RequestOptions} requestOptions - Request-specific configuration.
      *
      * @throws {@link phenoml.workflows.UnauthorizedError}
@@ -25,7 +25,7 @@ export declare class WorkflowsClient {
      *         verbose: true
      *     })
      */
-    list(request?: phenoml.workflows.WorkflowsListRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.ListWorkflowsResponse>;
+    list(request?: phenoml.workflows.ListRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.ListWorkflowsResponse>;
     private __list;
     /**
      * Creates a new workflow definition with graph generation from workflow instructions
@@ -58,7 +58,7 @@ export declare class WorkflowsClient {
      * Retrieves a workflow definition by its ID
      *
      * @param {string} id - ID of the workflow to retrieve
-     * @param {phenoml.workflows.WorkflowsGetRequest} request
+     * @param {phenoml.workflows.GetRequest} request
      * @param {WorkflowsClient.RequestOptions} requestOptions - Request-specific configuration.
      *
      * @throws {@link phenoml.workflows.UnauthorizedError}
@@ -71,7 +71,7 @@ export declare class WorkflowsClient {
      *         verbose: true
      *     })
      */
-    get(id: string, request?: phenoml.workflows.WorkflowsGetRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsGetResponse>;
+    get(id: string, request?: phenoml.workflows.GetRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.GetResponse>;
     private __get;
     /**
      * Updates an existing workflow definition
@@ -100,7 +100,7 @@ export declare class WorkflowsClient {
      *         fhir_provider_id: "550e8400-e29b-41d4-a716-446655440000"
      *     })
      */
-    update(id: string, request: phenoml.workflows.UpdateWorkflowRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsUpdateResponse>;
+    update(id: string, request: phenoml.workflows.UpdateWorkflowRequest, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.UpdateResponse>;
     private __update;
     /**
      * Deletes a workflow definition by its ID
@@ -116,7 +116,7 @@ export declare class WorkflowsClient {
      * @example
      *     await client.workflows.delete("id")
      */
-    delete(id: string, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsDeleteResponse>;
+    delete(id: string, requestOptions?: WorkflowsClient.RequestOptions): core.HttpResponsePromise<phenoml.workflows.DeleteResponse>;
     private __delete;
     /**
      * Executes a workflow with provided input data and returns results
@@ -130,6 +130,7 @@ export declare class WorkflowsClient {
      * @throws {@link phenoml.workflows.ForbiddenError}
      * @throws {@link phenoml.workflows.NotFoundError}
      * @throws {@link phenoml.workflows.InternalServerError}
+     * @throws {@link phenoml.workflows.GatewayTimeoutError}
      *
      * @example
      *     await client.workflows.execute("7a8b9c0d-1234-5678-abcd-ef9876543210", {