phenoml 12.5.0 → 13.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/cjs/BaseClient.d.ts +3 -0
- package/dist/cjs/BaseClient.js +17 -2
- package/dist/cjs/api/resources/agent/client/Client.js +17 -9
- package/dist/cjs/api/resources/agent/resources/prompts/client/Client.js +7 -7
- package/dist/cjs/api/resources/authtoken/resources/auth/client/Client.js +1 -1
- package/dist/cjs/api/resources/cohort/client/Client.js +1 -1
- package/dist/cjs/api/resources/construe/client/Client.js +39 -11
- package/dist/cjs/api/resources/fhir/client/Client.js +10 -6
- package/dist/cjs/api/resources/fhirProvider/client/Client.js +7 -7
- package/dist/cjs/api/resources/lang2Fhir/client/Client.d.ts +11 -3
- package/dist/cjs/api/resources/lang2Fhir/client/Client.js +16 -8
- package/dist/cjs/api/resources/lang2Fhir/client/requests/DocumentMultiRequest.d.ts +2 -0
- package/dist/cjs/api/resources/lang2Fhir/client/requests/DocumentRequest.d.ts +2 -0
- package/dist/cjs/api/resources/lang2Fhir/types/CreateMultiResponse.d.ts +3 -1
- package/dist/cjs/api/resources/lang2Fhir/types/DocumentConfig.d.ts +7 -0
- package/dist/cjs/api/resources/lang2Fhir/types/DocumentConfig.js +3 -0
- package/dist/cjs/api/resources/lang2Fhir/types/DocumentMultiResponse.d.ts +5 -0
- package/dist/cjs/api/resources/lang2Fhir/types/DocumentMultiResponse.js +3 -0
- package/dist/cjs/api/resources/lang2Fhir/types/PageClassification.d.ts +11 -0
- package/dist/cjs/api/resources/lang2Fhir/types/PageClassification.js +3 -0
- package/dist/cjs/api/resources/lang2Fhir/types/PageFilter.d.ts +7 -0
- package/dist/cjs/api/resources/lang2Fhir/types/PageFilter.js +3 -0
- package/dist/cjs/api/resources/lang2Fhir/types/index.d.ts +4 -0
- package/dist/cjs/api/resources/lang2Fhir/types/index.js +4 -0
- package/dist/cjs/api/resources/summary/client/Client.js +6 -6
- package/dist/cjs/api/resources/tools/client/Client.js +4 -4
- package/dist/cjs/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.d.ts +0 -2
- package/dist/cjs/api/resources/tools/resources/mcpServer/client/Client.js +4 -4
- package/dist/cjs/api/resources/tools/resources/mcpServer/resources/tools/client/Client.js +4 -4
- package/dist/cjs/api/resources/workflows/client/Client.js +22 -6
- package/dist/cjs/core/auth/AuthProvider.d.ts +1 -0
- package/dist/cjs/core/auth/AuthProvider.js +7 -0
- package/dist/cjs/core/auth/BasicAuth.d.ts +2 -2
- package/dist/cjs/core/auth/BasicAuth.js +7 -1
- package/dist/cjs/core/auth/index.d.ts +1 -1
- package/dist/cjs/core/auth/index.js +3 -1
- package/dist/cjs/core/fetcher/Fetcher.d.ts +8 -0
- package/dist/cjs/core/fetcher/Fetcher.js +13 -8
- package/dist/cjs/core/fetcher/requestWithRetries.js +4 -1
- package/dist/cjs/core/url/QueryStringBuilder.d.ts +47 -0
- package/dist/cjs/core/url/QueryStringBuilder.js +83 -0
- package/dist/cjs/core/url/index.d.ts +1 -0
- package/dist/cjs/core/url/index.js +3 -1
- package/dist/cjs/core/url/qs.d.ts +2 -1
- package/dist/cjs/core/url/qs.js +24 -12
- package/dist/cjs/errors/handleNonStatusCodeError.js +4 -1
- package/dist/cjs/errors/phenomlError.d.ts +3 -1
- package/dist/cjs/errors/phenomlError.js +4 -1
- package/dist/cjs/errors/phenomlTimeoutError.d.ts +4 -1
- package/dist/cjs/errors/phenomlTimeoutError.js +4 -1
- package/dist/cjs/version.d.ts +1 -1
- package/dist/cjs/version.js +1 -1
- package/dist/esm/BaseClient.d.mts +3 -0
- package/dist/esm/BaseClient.mjs +17 -2
- package/dist/esm/api/resources/agent/client/Client.mjs +17 -9
- package/dist/esm/api/resources/agent/resources/prompts/client/Client.mjs +7 -7
- package/dist/esm/api/resources/authtoken/resources/auth/client/Client.mjs +1 -1
- package/dist/esm/api/resources/cohort/client/Client.mjs +1 -1
- package/dist/esm/api/resources/construe/client/Client.mjs +39 -11
- package/dist/esm/api/resources/fhir/client/Client.mjs +10 -6
- package/dist/esm/api/resources/fhirProvider/client/Client.mjs +7 -7
- package/dist/esm/api/resources/lang2Fhir/client/Client.d.mts +11 -3
- package/dist/esm/api/resources/lang2Fhir/client/Client.mjs +16 -8
- package/dist/esm/api/resources/lang2Fhir/client/requests/DocumentMultiRequest.d.mts +2 -0
- package/dist/esm/api/resources/lang2Fhir/client/requests/DocumentRequest.d.mts +2 -0
- package/dist/esm/api/resources/lang2Fhir/types/CreateMultiResponse.d.mts +3 -1
- package/dist/esm/api/resources/lang2Fhir/types/DocumentConfig.d.mts +7 -0
- package/dist/esm/api/resources/lang2Fhir/types/DocumentConfig.mjs +2 -0
- package/dist/esm/api/resources/lang2Fhir/types/DocumentMultiResponse.d.mts +5 -0
- package/dist/esm/api/resources/lang2Fhir/types/DocumentMultiResponse.mjs +2 -0
- package/dist/esm/api/resources/lang2Fhir/types/PageClassification.d.mts +11 -0
- package/dist/esm/api/resources/lang2Fhir/types/PageClassification.mjs +2 -0
- package/dist/esm/api/resources/lang2Fhir/types/PageFilter.d.mts +7 -0
- package/dist/esm/api/resources/lang2Fhir/types/PageFilter.mjs +2 -0
- package/dist/esm/api/resources/lang2Fhir/types/index.d.mts +4 -0
- package/dist/esm/api/resources/lang2Fhir/types/index.mjs +4 -0
- package/dist/esm/api/resources/summary/client/Client.mjs +6 -6
- package/dist/esm/api/resources/tools/client/Client.mjs +4 -4
- package/dist/esm/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.d.mts +0 -2
- package/dist/esm/api/resources/tools/resources/mcpServer/client/Client.mjs +4 -4
- package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/Client.mjs +4 -4
- package/dist/esm/api/resources/workflows/client/Client.mjs +22 -6
- package/dist/esm/core/auth/AuthProvider.d.mts +1 -0
- package/dist/esm/core/auth/AuthProvider.mjs +6 -1
- package/dist/esm/core/auth/BasicAuth.d.mts +2 -2
- package/dist/esm/core/auth/BasicAuth.mjs +7 -1
- package/dist/esm/core/auth/index.d.mts +1 -1
- package/dist/esm/core/auth/index.mjs +1 -0
- package/dist/esm/core/fetcher/Fetcher.d.mts +8 -0
- package/dist/esm/core/fetcher/Fetcher.mjs +13 -8
- package/dist/esm/core/fetcher/requestWithRetries.mjs +4 -1
- package/dist/esm/core/url/QueryStringBuilder.d.mts +47 -0
- package/dist/esm/core/url/QueryStringBuilder.mjs +80 -0
- package/dist/esm/core/url/index.d.mts +1 -0
- package/dist/esm/core/url/index.mjs +1 -0
- package/dist/esm/core/url/qs.d.mts +2 -1
- package/dist/esm/core/url/qs.mjs +24 -12
- package/dist/esm/errors/handleNonStatusCodeError.mjs +4 -1
- package/dist/esm/errors/phenomlError.d.mts +3 -1
- package/dist/esm/errors/phenomlError.mjs +4 -1
- package/dist/esm/errors/phenomlTimeoutError.d.mts +4 -1
- package/dist/esm/errors/phenomlTimeoutError.mjs +4 -1
- package/dist/esm/version.d.mts +1 -1
- package/dist/esm/version.mjs +1 -1
- package/package.json +2 -2
- package/reference.md +11 -3
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@@ -55,7 +55,7 @@ export class ConstrueClient {
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headers: _headers,
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contentType: "application/json",
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queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
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requestType: "json",
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body: request,
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timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
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queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
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timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, "construe/codes/systems"),
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method: "GET",
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queryString: core.url.queryBuilder().mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams).build(),
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timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
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maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `construe/codes/systems/${core.url.encodePathParam(codesystem)}`),
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method: "GET",
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queryString: core.url
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.mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams)
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.build(),
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timeoutMs: ((_g = (_e = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.timeoutInSeconds) !== null && _e !== void 0 ? _e : (_f = this._options) === null || _f === void 0 ? void 0 : _f.timeoutInSeconds) !== null && _g !== void 0 ? _g : 60) * 1000,
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maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `construe/codes/systems/${core.url.encodePathParam(codesystem)}`),
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.mergeAdditional(requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.queryParams)
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.build(),
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maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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abortSignal: requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.abortSignal,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `construe/codes/systems/${core.url.encodePathParam(codesystem)}/export`),
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.build(),
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maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `construe/codes/${core.url.encodePathParam(codesystem)}`),
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.build(),
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maxRetries: (_h = requestOptions === null || requestOptions === void 0 ? void 0 : requestOptions.maxRetries) !== null && _h !== void 0 ? _h : (_j = this._options) === null || _j === void 0 ? void 0 : _j.maxRetries,
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `construe/codes/${core.url.encodePathParam(codesystem)}/${core.url.encodePathParam(codeID)}`),
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* **Patient identifier handling.** When generating a `patient` (or `patient-canvas`) resource, US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the resource remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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* **Patient identifier handling.** US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the bundle remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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*
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@@ -101,7 +105,9 @@ export declare class Lang2FhirClient {
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uploadProfile(request: phenoml.lang2Fhir.ProfileUploadRequest, requestOptions?: Lang2FhirClient.RequestOptions): core.HttpResponsePromise<phenoml.lang2Fhir.Lang2FhirUploadProfileResponse>;
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* Extracts text from a document (PDF or image) and converts it into a structured FHIR resource
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* **Patient identifier handling.** When generating a `patient` (or `patient-canvas`) resource, US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the resource remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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* **Patient identifier handling.** US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the bundle remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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@@ -139,6 +147,6 @@ export declare class Lang2FhirClient {
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extractMultipleFhirResourcesFromADocument(request: phenoml.lang2Fhir.DocumentMultiRequest, requestOptions?: Lang2FhirClient.RequestOptions): core.HttpResponsePromise<phenoml.lang2Fhir.
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extractMultipleFhirResourcesFromADocument(request: phenoml.lang2Fhir.DocumentMultiRequest, requestOptions?: Lang2FhirClient.RequestOptions): core.HttpResponsePromise<phenoml.lang2Fhir.DocumentMultiResponse>;
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* Converts natural language text into a structured FHIR resource
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*
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* **Patient identifier handling.** When generating a `patient` (or `patient-canvas`) resource, US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the resource remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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*
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@@ -49,7 +51,7 @@ export class Lang2FhirClient {
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@@ -85,6 +87,8 @@ export class Lang2FhirClient {
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* Automatically detects Patient, Condition, MedicationRequest, Observation, and other resource types from the text.
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* Resources are linked with proper references (e.g., Conditions reference the Patient).
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* **Patient identifier handling.** US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the bundle remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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*
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@@ -110,7 +114,7 @@ export class Lang2FhirClient {
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* **Patient identifier handling.** US Core requires `Patient.identifier` (a business identifier such as an MRN). When the source text contains an identifier, it is extracted with an appropriate URI system. When the source text does not contain a detectable identifier, a synthetic one is generated with `system: "urn:phenoml:lang2fhir-generated-id"` and a UUID `value` so the bundle remains FHIR-valid and US Core conformant. Callers who need a tenant-specific namespace should rewrite the synthetic system after extraction.
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/** FHIR validation method to apply to the generated bundle. 'none' skips validation (default). 'check' runs the bundle through a FHIR structure validator and includes the results in the response. 'fix' runs validation and attempts to auto-correct errors using an LLM (up to 3 validation passes). The response includes results from each pass. Warning: 'fix' can significantly increase latency due to multiple LLM and validation round-trips. */
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url: core.url.join((_d = (_c = (yield core.Supplier.get(this._options.baseUrl))) !== null && _c !== void 0 ? _c : (yield core.Supplier.get(this._options.environment))) !== null && _d !== void 0 ? _d : environments.phenomlEnvironment.Default, `fhir2summary/template/${core.url.encodePathParam(id)}`),
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