phenoml 0.0.6 → 0.0.7

package/dist/esm/api/index.d.mts

@@ -1,2 +1 @@
 export * from "./resources/index.mjs";
-export * from "./types/index.mjs";

package/dist/esm/api/index.mjs

@@ -1,2 +1 @@
 export * from "./resources/index.mjs";
-export * from "./types/index.mjs";

package/dist/esm/api/resources/workflows/client/Client.d.mts

@@ -1,7 +1,6 @@
 import type { BaseClientOptions, BaseRequestOptions } from "../../../../BaseClient.mjs";
 import * as core from "../../../../core/index.mjs";
-import { Workflows as Workflows_ } from "../resources/workflows/client/Client.mjs";
-import { McpServer } from "../resources/mcpServer/client/Client.mjs";
+import * as phenoml from "../../../index.mjs";
 export declare namespace Workflows {
     interface Options extends BaseClientOptions {
     }
@@ -10,34 +9,137 @@ export declare namespace Workflows {
 }
 export declare class Workflows {
     protected readonly _options: Workflows.Options;
-    protected _workflows: Workflows_ | undefined;
-    protected _mcpServer: McpServer | undefined;
     constructor(_options?: Workflows.Options);
-    get workflows(): Workflows_;
-    get mcpServer(): McpServer;
     /**
+     * Retrieves all workflow definitions for the authenticated user
+     *
+     * @param {phenoml.workflows.WorkflowsListRequest} request
+     * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
+     * @example
+     *     await client.workflows.list({
+     *         verbose: true
+     *     })
+     */
+    list(request?: phenoml.workflows.WorkflowsListRequest, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.ListWorkflowsResponse>;
+    private __list;
+    /**
+     * Creates a new workflow definition with graph generation from workflow instructions
+     *
+     * @param {phenoml.workflows.CreateWorkflowRequest} request
      * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
      *
+     * @throws {@link phenoml.workflows.BadRequestError}
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
      * @example
-     *     await client.workflows.createFhirResource()
+     *     await client.workflows.create({
+     *         verbose: true,
+     *         name: "Patient Data Mapping Workflow",
+     *         workflow_instructions: "Given diagnosis data, find the patient and create condition record",
+     *         sample_data: {
+     *             "patient_last_name": "Rippin",
+     *             "patient_first_name": "Clay",
+     *             "diagnosis_code": "I10"
+     *         },
+     *         fhir_provider_id: "550e8400-e29b-41d4-a716-446655440000"
+     *     })
      */
-    createFhirResource(requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<void>;
-    private __createFhirResource;
+    create(request: phenoml.workflows.CreateWorkflowRequest, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.CreateWorkflowResponse>;
+    private __create;
     /**
+     * Retrieves a workflow definition by its ID
+     *
+     * @param {string} id - ID of the workflow to retrieve
+     * @param {phenoml.workflows.WorkflowsGetRequest} request
      * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
      *
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.NotFoundError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
      * @example
-     *     await client.workflows.searchFhirResources()
+     *     await client.workflows.get("id", {
+     *         verbose: true
+     *     })
      */
-    searchFhirResources(requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<void>;
-    private __searchFhirResources;
+    get(id: string, request?: phenoml.workflows.WorkflowsGetRequest, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsGetResponse>;
+    private __get;
     /**
+     * Updates an existing workflow definition
+     *
+     * @param {string} id - ID of the workflow to update
+     * @param {phenoml.workflows.UpdateWorkflowRequest} request
      * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
      *
+     * @throws {@link phenoml.workflows.BadRequestError}
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.NotFoundError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
+     * @example
+     *     await client.workflows.update("id", {
+     *         verbose: true,
+     *         name: "Updated Patient Data Mapping Workflow",
+     *         workflow_instructions: "Given diagnosis data, find the patient and create condition record",
+     *         sample_data: {
+     *             "patient_last_name": "Smith",
+     *             "patient_first_name": "John",
+     *             "diagnosis_code": "E11"
+     *         },
+     *         fhir_provider_id: "550e8400-e29b-41d4-a716-446655440000"
+     *     })
+     */
+    update(id: string, request: phenoml.workflows.UpdateWorkflowRequest, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsUpdateResponse>;
+    private __update;
+    /**
+     * Deletes a workflow definition by its ID
+     *
+     * @param {string} id - ID of the workflow to delete
+     * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.NotFoundError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
+     * @example
+     *     await client.workflows.delete("id")
+     */
+    delete(id: string, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.WorkflowsDeleteResponse>;
+    private __delete;
+    /**
+     * Executes a workflow with provided input data and returns results
+     *
+     * @param {string} id - ID of the workflow to execute
+     * @param {phenoml.workflows.ExecuteWorkflowRequest} request
+     * @param {Workflows.RequestOptions} requestOptions - Request-specific configuration.
+     *
+     * @throws {@link phenoml.workflows.BadRequestError}
+     * @throws {@link phenoml.workflows.UnauthorizedError}
+     * @throws {@link phenoml.workflows.ForbiddenError}
+     * @throws {@link phenoml.workflows.NotFoundError}
+     * @throws {@link phenoml.workflows.InternalServerError}
+     *
      * @example
-     *     await client.workflows.analyzeCohort()
+     *     await client.workflows.execute("id", {
+     *         input_data: {
+     *             "patient_last_name": "Johnson",
+     *             "patient_first_name": "Mary",
+     *             "diagnosis_code": "M79.3",
+     *             "encounter_date": "2024-01-15"
+     *         }
+     *     })
      */
-    analyzeCohort(requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<void>;
-    private __analyzeCohort;
+    execute(id: string, request: phenoml.workflows.ExecuteWorkflowRequest, requestOptions?: Workflows.RequestOptions): core.HttpResponsePromise<phenoml.workflows.ExecuteWorkflowResponse>;
+    private __execute;
     protected _getAuthorizationHeader(): Promise<string | undefined>;
 }