phenoml 0.0.3 → 0.0.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (299) hide show
  1. package/dist/cjs/Client.d.ts +10 -4
  2. package/dist/cjs/Client.js +17 -7
  3. package/dist/cjs/api/resources/agent/client/Client.d.ts +12 -8
  4. package/dist/cjs/api/resources/agent/client/Client.js +15 -7
  5. package/dist/cjs/api/resources/agent/client/requests/AgentChatRequest.d.ts +0 -3
  6. package/dist/cjs/api/resources/agent/client/requests/index.d.ts +0 -2
  7. package/dist/cjs/api/resources/agent/resources/prompts/client/Client.d.ts +5 -5
  8. package/dist/cjs/api/resources/agent/resources/prompts/client/Client.js +6 -2
  9. package/dist/cjs/api/resources/agent/{client/requests → types}/AgentCreateRequest.d.ts +14 -12
  10. package/dist/cjs/api/resources/agent/types/AgentTemplate.d.ts +14 -4
  11. package/dist/cjs/api/resources/agent/types/index.d.ts +1 -4
  12. package/dist/cjs/api/resources/agent/types/index.js +1 -4
  13. package/dist/cjs/api/resources/authtoken/client/Client.d.ts +3 -3
  14. package/dist/cjs/api/resources/authtoken/client/Client.js +1 -1
  15. package/dist/cjs/api/resources/authtoken/resources/auth/client/Client.d.ts +2 -2
  16. package/dist/cjs/api/resources/authtoken/resources/auth/client/Client.js +1 -1
  17. package/dist/cjs/api/resources/cohort/client/Client.d.ts +5 -5
  18. package/dist/cjs/api/resources/cohort/client/Client.js +6 -2
  19. package/dist/cjs/api/resources/construe/client/Client.d.ts +5 -5
  20. package/dist/cjs/api/resources/construe/client/Client.js +6 -2
  21. package/dist/cjs/api/resources/fhir/client/Client.d.ts +293 -0
  22. package/dist/cjs/api/resources/fhir/client/Client.js +674 -0
  23. package/dist/cjs/api/resources/fhir/client/index.d.ts +2 -0
  24. package/dist/cjs/api/resources/fhir/client/index.js +17 -0
  25. package/dist/cjs/api/resources/fhir/client/requests/FhirCreateRequest.d.ts +18 -0
  26. package/dist/cjs/api/resources/fhir/client/requests/FhirDeleteRequest.d.ts +13 -0
  27. package/dist/cjs/api/resources/fhir/client/requests/FhirExecuteBundleRequest.d.ts +47 -0
  28. package/dist/cjs/api/resources/fhir/client/requests/FhirPatchRequest.d.ts +69 -0
  29. package/dist/cjs/api/resources/fhir/client/requests/FhirSearchRequest.d.ts +26 -0
  30. package/dist/cjs/api/resources/fhir/client/requests/FhirUpsertRequest.d.ts +19 -0
  31. package/dist/cjs/api/resources/fhir/client/requests/FhirUpsertRequest.js +5 -0
  32. package/dist/cjs/api/resources/fhir/client/requests/index.d.ts +6 -0
  33. package/dist/cjs/api/resources/fhir/client/requests/index.js +2 -0
  34. package/dist/cjs/api/resources/fhir/errors/BadRequestError.d.ts +8 -0
  35. package/dist/cjs/api/resources/fhir/errors/BadRequestError.js +52 -0
  36. package/dist/cjs/api/resources/fhir/errors/InternalServerError.d.ts +8 -0
  37. package/dist/cjs/api/resources/fhir/errors/InternalServerError.js +52 -0
  38. package/dist/cjs/api/resources/fhir/errors/NotFoundError.d.ts +8 -0
  39. package/dist/cjs/api/resources/fhir/errors/NotFoundError.js +52 -0
  40. package/dist/cjs/api/resources/fhir/errors/UnauthorizedError.d.ts +8 -0
  41. package/dist/cjs/api/resources/fhir/errors/UnauthorizedError.js +52 -0
  42. package/dist/cjs/api/resources/fhir/errors/index.d.ts +4 -0
  43. package/dist/cjs/api/resources/fhir/errors/index.js +20 -0
  44. package/dist/cjs/api/resources/fhir/index.d.ts +3 -0
  45. package/dist/cjs/api/resources/fhir/index.js +19 -0
  46. package/dist/cjs/api/resources/fhir/types/ErrorResponse.d.ts +14 -0
  47. package/dist/cjs/api/resources/fhir/types/ErrorResponse.js +5 -0
  48. package/dist/cjs/api/resources/fhir/types/FhirBundle.d.ts +57 -0
  49. package/dist/cjs/api/resources/fhir/types/FhirBundle.js +25 -0
  50. package/dist/cjs/api/resources/fhir/types/FhirPatchRequestBodyItem.d.ts +26 -0
  51. package/dist/cjs/api/resources/fhir/types/FhirPatchRequestBodyItem.js +17 -0
  52. package/dist/cjs/api/resources/fhir/types/FhirResource.d.ts +27 -0
  53. package/dist/cjs/api/resources/fhir/types/FhirResource.js +5 -0
  54. package/dist/cjs/api/resources/fhir/types/FhirSearchResponse.d.ts +5 -0
  55. package/dist/cjs/api/resources/fhir/types/FhirSearchResponse.js +5 -0
  56. package/dist/cjs/api/resources/fhir/types/index.d.ts +5 -0
  57. package/dist/cjs/api/resources/fhir/types/index.js +21 -0
  58. package/dist/cjs/api/resources/fhirProvider/client/Client.d.ts +161 -0
  59. package/dist/cjs/api/resources/fhirProvider/client/Client.js +596 -0
  60. package/dist/cjs/api/resources/fhirProvider/client/index.d.ts +2 -0
  61. package/dist/cjs/api/resources/fhirProvider/client/index.js +17 -0
  62. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderAddAuthConfigRequest.d.ts +20 -0
  63. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderAddAuthConfigRequest.js +5 -0
  64. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderCreateRequest.d.ts +30 -0
  65. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderCreateRequest.js +5 -0
  66. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderRemoveAuthConfigRequest.d.ts +13 -0
  67. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderRemoveAuthConfigRequest.js +5 -0
  68. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderSetActiveAuthConfigRequest.d.ts +13 -0
  69. package/dist/cjs/api/resources/fhirProvider/client/requests/FhirProviderSetActiveAuthConfigRequest.js +5 -0
  70. package/dist/cjs/api/resources/fhirProvider/client/requests/index.d.ts +4 -0
  71. package/dist/cjs/api/resources/fhirProvider/client/requests/index.js +2 -0
  72. package/dist/cjs/api/resources/fhirProvider/errors/BadRequestError.d.ts +8 -0
  73. package/dist/cjs/api/resources/fhirProvider/errors/BadRequestError.js +52 -0
  74. package/dist/cjs/api/resources/fhirProvider/errors/ForbiddenError.d.ts +8 -0
  75. package/dist/cjs/api/resources/fhirProvider/errors/ForbiddenError.js +52 -0
  76. package/dist/cjs/api/resources/fhirProvider/errors/InternalServerError.d.ts +8 -0
  77. package/dist/cjs/api/resources/fhirProvider/errors/InternalServerError.js +52 -0
  78. package/dist/cjs/api/resources/fhirProvider/errors/NotFoundError.d.ts +8 -0
  79. package/dist/cjs/api/resources/fhirProvider/errors/NotFoundError.js +52 -0
  80. package/dist/cjs/api/resources/fhirProvider/errors/UnauthorizedError.d.ts +8 -0
  81. package/dist/cjs/api/resources/fhirProvider/errors/UnauthorizedError.js +52 -0
  82. package/dist/cjs/api/resources/fhirProvider/errors/index.d.ts +5 -0
  83. package/dist/cjs/api/resources/fhirProvider/errors/index.js +21 -0
  84. package/dist/cjs/api/resources/fhirProvider/index.d.ts +3 -0
  85. package/dist/cjs/api/resources/fhirProvider/index.js +19 -0
  86. package/dist/cjs/api/resources/fhirProvider/types/AuthMethod.d.ts +14 -0
  87. package/dist/cjs/api/resources/fhirProvider/types/AuthMethod.js +13 -0
  88. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderAuthConfig.d.ts +22 -0
  89. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderAuthConfig.js +5 -0
  90. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderDeleteResponse.d.ts +7 -0
  91. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderDeleteResponse.js +5 -0
  92. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderListResponse.d.ts +9 -0
  93. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderListResponse.js +5 -0
  94. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderRemoveAuthConfigResponse.d.ts +9 -0
  95. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderRemoveAuthConfigResponse.js +5 -0
  96. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderResponse.d.ts +9 -0
  97. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderResponse.js +5 -0
  98. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderSetActiveAuthConfigResponse.d.ts +9 -0
  99. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderSetActiveAuthConfigResponse.js +5 -0
  100. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderTemplate.d.ts +25 -0
  101. package/dist/cjs/api/resources/fhirProvider/types/FhirProviderTemplate.js +5 -0
  102. package/dist/cjs/api/resources/fhirProvider/types/FhirQueryResponse.d.ts +19 -0
  103. package/dist/cjs/api/resources/fhirProvider/types/FhirQueryResponse.js +5 -0
  104. package/dist/cjs/api/resources/fhirProvider/types/JsonWebKey.d.ts +20 -0
  105. package/dist/cjs/api/resources/fhirProvider/types/JsonWebKey.js +5 -0
  106. package/dist/cjs/api/resources/fhirProvider/types/Provider.d.ts +17 -0
  107. package/dist/cjs/api/resources/{agent/types/ProviderType.js → fhirProvider/types/Provider.js} +8 -4
  108. package/dist/cjs/api/resources/fhirProvider/types/ServiceAccountKey.d.ts +19 -0
  109. package/dist/cjs/api/resources/fhirProvider/types/ServiceAccountKey.js +5 -0
  110. package/dist/cjs/api/resources/fhirProvider/types/SmartConfiguration.d.ts +18 -0
  111. package/dist/cjs/api/resources/fhirProvider/types/SmartConfiguration.js +5 -0
  112. package/dist/cjs/api/resources/fhirProvider/types/index.d.ts +13 -0
  113. package/dist/cjs/api/resources/fhirProvider/types/index.js +29 -0
  114. package/dist/cjs/api/resources/index.d.ts +2 -0
  115. package/dist/cjs/api/resources/index.js +3 -1
  116. package/dist/cjs/api/resources/lang2Fhir/client/Client.d.ts +5 -5
  117. package/dist/cjs/api/resources/lang2Fhir/client/Client.js +6 -2
  118. package/dist/cjs/api/resources/tools/client/Client.d.ts +6 -6
  119. package/dist/cjs/api/resources/tools/client/Client.js +7 -3
  120. package/dist/cjs/api/resources/tools/client/requests/CohortRequest.d.ts +3 -17
  121. package/dist/cjs/api/resources/tools/client/requests/CohortRequest.js +0 -10
  122. package/dist/cjs/api/resources/tools/client/requests/Lang2FhirAndCreateRequest.d.ts +2 -14
  123. package/dist/cjs/api/resources/tools/client/requests/Lang2FhirAndCreateRequest.js +0 -6
  124. package/dist/cjs/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.d.ts +2 -16
  125. package/dist/cjs/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.js +0 -10
  126. package/dist/cjs/api/resources/tools/resources/mcpServer/client/Client.d.ts +5 -5
  127. package/dist/cjs/api/resources/tools/resources/mcpServer/client/Client.js +6 -2
  128. package/dist/cjs/api/resources/tools/resources/mcpServer/resources/tools/client/Client.d.ts +5 -5
  129. package/dist/cjs/api/resources/tools/resources/mcpServer/resources/tools/client/Client.js +6 -2
  130. package/dist/cjs/api/resources/tools/types/index.d.ts +0 -1
  131. package/dist/cjs/api/resources/tools/types/index.js +0 -1
  132. package/dist/cjs/core/fetcher/Fetcher.d.ts +1 -1
  133. package/dist/cjs/core/fetcher/requestWithRetries.js +44 -8
  134. package/dist/cjs/core/headers.d.ts +2 -2
  135. package/dist/cjs/version.d.ts +1 -1
  136. package/dist/cjs/version.js +1 -1
  137. package/dist/esm/Client.d.mts +10 -4
  138. package/dist/esm/Client.mjs +13 -3
  139. package/dist/esm/api/resources/agent/client/Client.d.mts +12 -8
  140. package/dist/esm/api/resources/agent/client/Client.mjs +15 -7
  141. package/dist/esm/api/resources/agent/client/requests/AgentChatRequest.d.mts +0 -3
  142. package/dist/esm/api/resources/agent/client/requests/index.d.mts +0 -2
  143. package/dist/esm/api/resources/agent/resources/prompts/client/Client.d.mts +5 -5
  144. package/dist/esm/api/resources/agent/resources/prompts/client/Client.mjs +6 -2
  145. package/dist/esm/api/resources/agent/{client/requests → types}/AgentCreateRequest.d.mts +14 -12
  146. package/dist/esm/api/resources/agent/types/AgentTemplate.d.mts +14 -4
  147. package/dist/esm/api/resources/agent/types/index.d.mts +1 -4
  148. package/dist/esm/api/resources/agent/types/index.mjs +1 -4
  149. package/dist/esm/api/resources/authtoken/client/Client.d.mts +3 -3
  150. package/dist/esm/api/resources/authtoken/client/Client.mjs +1 -1
  151. package/dist/esm/api/resources/authtoken/resources/auth/client/Client.d.mts +2 -2
  152. package/dist/esm/api/resources/authtoken/resources/auth/client/Client.mjs +1 -1
  153. package/dist/esm/api/resources/cohort/client/Client.d.mts +5 -5
  154. package/dist/esm/api/resources/cohort/client/Client.mjs +6 -2
  155. package/dist/esm/api/resources/construe/client/Client.d.mts +5 -5
  156. package/dist/esm/api/resources/construe/client/Client.mjs +6 -2
  157. package/dist/esm/api/resources/fhir/client/Client.d.mts +293 -0
  158. package/dist/esm/api/resources/fhir/client/Client.mjs +637 -0
  159. package/dist/esm/api/resources/fhir/client/index.d.mts +2 -0
  160. package/dist/esm/api/resources/fhir/client/index.mjs +1 -0
  161. package/dist/esm/api/resources/fhir/client/requests/FhirCreateRequest.d.mts +18 -0
  162. package/dist/esm/api/resources/fhir/client/requests/FhirDeleteRequest.d.mts +13 -0
  163. package/dist/esm/api/resources/fhir/client/requests/FhirExecuteBundleRequest.d.mts +47 -0
  164. package/dist/esm/api/resources/fhir/client/requests/FhirPatchRequest.d.mts +69 -0
  165. package/dist/esm/api/resources/fhir/client/requests/FhirSearchRequest.d.mts +26 -0
  166. package/dist/esm/api/resources/fhir/client/requests/FhirUpsertRequest.d.mts +19 -0
  167. package/dist/esm/api/resources/fhir/client/requests/FhirUpsertRequest.mjs +4 -0
  168. package/dist/esm/api/resources/fhir/client/requests/index.d.mts +6 -0
  169. package/dist/esm/api/resources/fhir/client/requests/index.mjs +1 -0
  170. package/dist/esm/api/resources/fhir/errors/BadRequestError.d.mts +8 -0
  171. package/dist/esm/api/resources/fhir/errors/BadRequestError.mjs +15 -0
  172. package/dist/esm/api/resources/fhir/errors/InternalServerError.d.mts +8 -0
  173. package/dist/esm/api/resources/fhir/errors/InternalServerError.mjs +15 -0
  174. package/dist/esm/api/resources/fhir/errors/NotFoundError.d.mts +8 -0
  175. package/dist/esm/api/resources/fhir/errors/NotFoundError.mjs +15 -0
  176. package/dist/esm/api/resources/fhir/errors/UnauthorizedError.d.mts +8 -0
  177. package/dist/esm/api/resources/fhir/errors/UnauthorizedError.mjs +15 -0
  178. package/dist/esm/api/resources/fhir/errors/index.d.mts +4 -0
  179. package/dist/esm/api/resources/fhir/errors/index.mjs +4 -0
  180. package/dist/esm/api/resources/fhir/index.d.mts +3 -0
  181. package/dist/esm/api/resources/fhir/index.mjs +3 -0
  182. package/dist/esm/api/resources/fhir/types/ErrorResponse.d.mts +14 -0
  183. package/dist/esm/api/resources/fhir/types/ErrorResponse.mjs +4 -0
  184. package/dist/esm/api/resources/fhir/types/FhirBundle.d.mts +57 -0
  185. package/dist/esm/api/resources/fhir/types/FhirBundle.mjs +22 -0
  186. package/dist/esm/api/resources/fhir/types/FhirPatchRequestBodyItem.d.mts +26 -0
  187. package/dist/esm/api/resources/fhir/types/FhirPatchRequestBodyItem.mjs +14 -0
  188. package/dist/esm/api/resources/fhir/types/FhirResource.d.mts +27 -0
  189. package/dist/esm/api/resources/fhir/types/FhirResource.mjs +4 -0
  190. package/dist/esm/api/resources/fhir/types/FhirSearchResponse.d.mts +5 -0
  191. package/dist/esm/api/resources/fhir/types/FhirSearchResponse.mjs +4 -0
  192. package/dist/esm/api/resources/fhir/types/index.d.mts +5 -0
  193. package/dist/esm/api/resources/fhir/types/index.mjs +5 -0
  194. package/dist/esm/api/resources/fhirProvider/client/Client.d.mts +161 -0
  195. package/dist/esm/api/resources/fhirProvider/client/Client.mjs +559 -0
  196. package/dist/esm/api/resources/fhirProvider/client/index.d.mts +2 -0
  197. package/dist/esm/api/resources/fhirProvider/client/index.mjs +1 -0
  198. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderAddAuthConfigRequest.d.mts +20 -0
  199. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderAddAuthConfigRequest.mjs +4 -0
  200. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderCreateRequest.d.mts +30 -0
  201. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderCreateRequest.mjs +4 -0
  202. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderRemoveAuthConfigRequest.d.mts +13 -0
  203. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderRemoveAuthConfigRequest.mjs +4 -0
  204. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderSetActiveAuthConfigRequest.d.mts +13 -0
  205. package/dist/esm/api/resources/fhirProvider/client/requests/FhirProviderSetActiveAuthConfigRequest.mjs +4 -0
  206. package/dist/esm/api/resources/fhirProvider/client/requests/index.d.mts +4 -0
  207. package/dist/esm/api/resources/fhirProvider/client/requests/index.mjs +1 -0
  208. package/dist/esm/api/resources/fhirProvider/errors/BadRequestError.d.mts +8 -0
  209. package/dist/esm/api/resources/fhirProvider/errors/BadRequestError.mjs +15 -0
  210. package/dist/esm/api/resources/fhirProvider/errors/ForbiddenError.d.mts +8 -0
  211. package/dist/esm/api/resources/fhirProvider/errors/ForbiddenError.mjs +15 -0
  212. package/dist/esm/api/resources/fhirProvider/errors/InternalServerError.d.mts +8 -0
  213. package/dist/esm/api/resources/fhirProvider/errors/InternalServerError.mjs +15 -0
  214. package/dist/esm/api/resources/fhirProvider/errors/NotFoundError.d.mts +8 -0
  215. package/dist/esm/api/resources/fhirProvider/errors/NotFoundError.mjs +15 -0
  216. package/dist/esm/api/resources/fhirProvider/errors/UnauthorizedError.d.mts +8 -0
  217. package/dist/esm/api/resources/fhirProvider/errors/UnauthorizedError.mjs +15 -0
  218. package/dist/esm/api/resources/fhirProvider/errors/index.d.mts +5 -0
  219. package/dist/esm/api/resources/fhirProvider/errors/index.mjs +5 -0
  220. package/dist/esm/api/resources/fhirProvider/index.d.mts +3 -0
  221. package/dist/esm/api/resources/fhirProvider/index.mjs +3 -0
  222. package/dist/esm/api/resources/fhirProvider/types/AuthMethod.d.mts +14 -0
  223. package/dist/esm/api/resources/fhirProvider/types/AuthMethod.mjs +10 -0
  224. package/dist/esm/api/resources/fhirProvider/types/FhirProviderAuthConfig.d.mts +22 -0
  225. package/dist/esm/api/resources/fhirProvider/types/FhirProviderAuthConfig.mjs +4 -0
  226. package/dist/esm/api/resources/fhirProvider/types/FhirProviderDeleteResponse.d.mts +7 -0
  227. package/dist/esm/api/resources/fhirProvider/types/FhirProviderDeleteResponse.mjs +4 -0
  228. package/dist/esm/api/resources/fhirProvider/types/FhirProviderListResponse.d.mts +9 -0
  229. package/dist/esm/api/resources/fhirProvider/types/FhirProviderListResponse.mjs +4 -0
  230. package/dist/esm/api/resources/fhirProvider/types/FhirProviderRemoveAuthConfigResponse.d.mts +9 -0
  231. package/dist/esm/api/resources/fhirProvider/types/FhirProviderRemoveAuthConfigResponse.mjs +4 -0
  232. package/dist/esm/api/resources/fhirProvider/types/FhirProviderResponse.d.mts +9 -0
  233. package/dist/esm/api/resources/fhirProvider/types/FhirProviderResponse.mjs +4 -0
  234. package/dist/esm/api/resources/fhirProvider/types/FhirProviderSetActiveAuthConfigResponse.d.mts +9 -0
  235. package/dist/esm/api/resources/fhirProvider/types/FhirProviderSetActiveAuthConfigResponse.mjs +4 -0
  236. package/dist/esm/api/resources/fhirProvider/types/FhirProviderTemplate.d.mts +25 -0
  237. package/dist/esm/api/resources/fhirProvider/types/FhirProviderTemplate.mjs +4 -0
  238. package/dist/esm/api/resources/fhirProvider/types/FhirQueryResponse.d.mts +19 -0
  239. package/dist/esm/api/resources/fhirProvider/types/FhirQueryResponse.mjs +4 -0
  240. package/dist/esm/api/resources/fhirProvider/types/JsonWebKey.d.mts +20 -0
  241. package/dist/esm/api/resources/fhirProvider/types/JsonWebKey.mjs +4 -0
  242. package/dist/esm/api/resources/fhirProvider/types/Provider.d.mts +17 -0
  243. package/dist/esm/api/resources/{agent/types/ProviderType.mjs → fhirProvider/types/Provider.mjs} +7 -3
  244. package/dist/esm/api/resources/fhirProvider/types/ServiceAccountKey.d.mts +19 -0
  245. package/dist/esm/api/resources/fhirProvider/types/ServiceAccountKey.mjs +4 -0
  246. package/dist/esm/api/resources/fhirProvider/types/SmartConfiguration.d.mts +18 -0
  247. package/dist/esm/api/resources/fhirProvider/types/SmartConfiguration.mjs +4 -0
  248. package/dist/esm/api/resources/fhirProvider/types/index.d.mts +13 -0
  249. package/dist/esm/api/resources/fhirProvider/types/index.mjs +13 -0
  250. package/dist/esm/api/resources/index.d.mts +2 -0
  251. package/dist/esm/api/resources/index.mjs +2 -0
  252. package/dist/esm/api/resources/lang2Fhir/client/Client.d.mts +5 -5
  253. package/dist/esm/api/resources/lang2Fhir/client/Client.mjs +6 -2
  254. package/dist/esm/api/resources/tools/client/Client.d.mts +6 -6
  255. package/dist/esm/api/resources/tools/client/Client.mjs +7 -3
  256. package/dist/esm/api/resources/tools/client/requests/CohortRequest.d.mts +3 -17
  257. package/dist/esm/api/resources/tools/client/requests/CohortRequest.mjs +1 -9
  258. package/dist/esm/api/resources/tools/client/requests/Lang2FhirAndCreateRequest.d.mts +2 -14
  259. package/dist/esm/api/resources/tools/client/requests/Lang2FhirAndCreateRequest.mjs +0 -6
  260. package/dist/esm/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.d.mts +2 -16
  261. package/dist/esm/api/resources/tools/client/requests/Lang2FhirAndSearchRequest.mjs +1 -9
  262. package/dist/esm/api/resources/tools/resources/mcpServer/client/Client.d.mts +5 -5
  263. package/dist/esm/api/resources/tools/resources/mcpServer/client/Client.mjs +6 -2
  264. package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/Client.d.mts +5 -5
  265. package/dist/esm/api/resources/tools/resources/mcpServer/resources/tools/client/Client.mjs +6 -2
  266. package/dist/esm/api/resources/tools/types/index.d.mts +0 -1
  267. package/dist/esm/api/resources/tools/types/index.mjs +0 -1
  268. package/dist/esm/core/fetcher/Fetcher.d.mts +1 -1
  269. package/dist/esm/core/fetcher/requestWithRetries.mjs +44 -8
  270. package/dist/esm/core/headers.d.mts +2 -2
  271. package/dist/esm/version.d.mts +1 -1
  272. package/dist/esm/version.mjs +1 -1
  273. package/package.json +1 -2
  274. package/reference.md +1090 -4
  275. package/LICENSE +0 -21
  276. package/dist/cjs/api/resources/agent/client/requests/AgentUpdateRequest.d.ts +0 -25
  277. package/dist/cjs/api/resources/agent/types/AgentFhirConfig.d.ts +0 -12
  278. package/dist/cjs/api/resources/agent/types/AgentProvider.d.ts +0 -11
  279. package/dist/cjs/api/resources/agent/types/ChatFhirClientConfig.d.ts +0 -12
  280. package/dist/cjs/api/resources/agent/types/ProviderType.d.ts +0 -13
  281. package/dist/cjs/api/resources/tools/types/FhirClientConfig.d.ts +0 -12
  282. package/dist/esm/api/resources/agent/client/requests/AgentUpdateRequest.d.mts +0 -25
  283. package/dist/esm/api/resources/agent/types/AgentFhirConfig.d.mts +0 -12
  284. package/dist/esm/api/resources/agent/types/AgentProvider.d.mts +0 -11
  285. package/dist/esm/api/resources/agent/types/ChatFhirClientConfig.d.mts +0 -12
  286. package/dist/esm/api/resources/agent/types/ProviderType.d.mts +0 -13
  287. package/dist/esm/api/resources/tools/types/FhirClientConfig.d.mts +0 -12
  288. /package/dist/cjs/api/resources/agent/{client/requests → types}/AgentCreateRequest.js +0 -0
  289. /package/dist/cjs/api/resources/{agent/client/requests/AgentUpdateRequest.js → fhir/client/requests/FhirCreateRequest.js} +0 -0
  290. /package/dist/cjs/api/resources/{agent/types/AgentFhirConfig.js → fhir/client/requests/FhirDeleteRequest.js} +0 -0
  291. /package/dist/cjs/api/resources/{agent/types/AgentProvider.js → fhir/client/requests/FhirExecuteBundleRequest.js} +0 -0
  292. /package/dist/cjs/api/resources/{agent/types/ChatFhirClientConfig.js → fhir/client/requests/FhirPatchRequest.js} +0 -0
  293. /package/dist/cjs/api/resources/{tools/types/FhirClientConfig.js → fhir/client/requests/FhirSearchRequest.js} +0 -0
  294. /package/dist/esm/api/resources/agent/{client/requests → types}/AgentCreateRequest.mjs +0 -0
  295. /package/dist/esm/api/resources/{agent/client/requests/AgentUpdateRequest.mjs → fhir/client/requests/FhirCreateRequest.mjs} +0 -0
  296. /package/dist/esm/api/resources/{agent/types/AgentFhirConfig.mjs → fhir/client/requests/FhirDeleteRequest.mjs} +0 -0
  297. /package/dist/esm/api/resources/{agent/types/AgentProvider.mjs → fhir/client/requests/FhirExecuteBundleRequest.mjs} +0 -0
  298. /package/dist/esm/api/resources/{agent/types/ChatFhirClientConfig.mjs → fhir/client/requests/FhirPatchRequest.mjs} +0 -0
  299. /package/dist/esm/api/resources/{tools/types/FhirClientConfig.mjs → fhir/client/requests/FhirSearchRequest.mjs} +0 -0
@@ -0,0 +1,26 @@
1
+ /**
2
+ * This file was auto-generated by Fern from our API Definition.
3
+ */
4
+ export interface FhirPatchRequestBodyItem {
5
+ /** The operation to perform */
6
+ op: FhirPatchRequestBodyItem.Op;
7
+ /** JSON Pointer to the target location */
8
+ path: string;
9
+ value?: unknown;
10
+ /** Source location for move and copy operations (JSON Pointer) */
11
+ from?: string;
12
+ }
13
+ export declare namespace FhirPatchRequestBodyItem {
14
+ /**
15
+ * The operation to perform
16
+ */
17
+ type Op = "add" | "remove" | "replace" | "move" | "copy" | "test";
18
+ const Op: {
19
+ readonly Add: "add";
20
+ readonly Remove: "remove";
21
+ readonly Replace: "replace";
22
+ readonly Move: "move";
23
+ readonly Copy: "copy";
24
+ readonly Test: "test";
25
+ };
26
+ }
@@ -0,0 +1,17 @@
1
+ "use strict";
2
+ /**
3
+ * This file was auto-generated by Fern from our API Definition.
4
+ */
5
+ Object.defineProperty(exports, "__esModule", { value: true });
6
+ exports.FhirPatchRequestBodyItem = void 0;
7
+ var FhirPatchRequestBodyItem;
8
+ (function (FhirPatchRequestBodyItem) {
9
+ FhirPatchRequestBodyItem.Op = {
10
+ Add: "add",
11
+ Remove: "remove",
12
+ Replace: "replace",
13
+ Move: "move",
14
+ Copy: "copy",
15
+ Test: "test",
16
+ };
17
+ })(FhirPatchRequestBodyItem || (exports.FhirPatchRequestBodyItem = FhirPatchRequestBodyItem = {}));
@@ -0,0 +1,27 @@
1
+ /**
2
+ * This file was auto-generated by Fern from our API Definition.
3
+ */
4
+ /**
5
+ * A generic FHIR resource. All FHIR resources share common elements like resourceType and id,
6
+ * but the specific structure depends on the resource type.
7
+ */
8
+ export interface FhirResource {
9
+ /** The type of FHIR resource (e.g., Patient, Observation, etc.) */
10
+ resourceType: string;
11
+ /** Logical ID of the resource */
12
+ id?: string;
13
+ /** Metadata about the resource */
14
+ meta?: FhirResource.Meta;
15
+ /** Accepts any additional properties */
16
+ [key: string]: any;
17
+ }
18
+ export declare namespace FhirResource {
19
+ /**
20
+ * Metadata about the resource
21
+ */
22
+ interface Meta {
23
+ versionId?: string;
24
+ lastUpdated?: string;
25
+ profile?: string[];
26
+ }
27
+ }
@@ -0,0 +1,5 @@
1
+ "use strict";
2
+ /**
3
+ * This file was auto-generated by Fern from our API Definition.
4
+ */
5
+ Object.defineProperty(exports, "__esModule", { value: true });
@@ -0,0 +1,5 @@
1
+ /**
2
+ * This file was auto-generated by Fern from our API Definition.
3
+ */
4
+ import * as phenoml from "../../../index.js";
5
+ export type FhirSearchResponse = phenoml.fhir.FhirBundle | phenoml.fhir.FhirResource;
@@ -0,0 +1,5 @@
1
+ "use strict";
2
+ /**
3
+ * This file was auto-generated by Fern from our API Definition.
4
+ */
5
+ Object.defineProperty(exports, "__esModule", { value: true });
@@ -0,0 +1,5 @@
1
+ export * from "./FhirSearchResponse.js";
2
+ export * from "./FhirPatchRequestBodyItem.js";
3
+ export * from "./FhirBundle.js";
4
+ export * from "./FhirResource.js";
5
+ export * from "./ErrorResponse.js";
@@ -0,0 +1,21 @@
1
+ "use strict";
2
+ var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
3
+ if (k2 === undefined) k2 = k;
4
+ var desc = Object.getOwnPropertyDescriptor(m, k);
5
+ if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
6
+ desc = { enumerable: true, get: function() { return m[k]; } };
7
+ }
8
+ Object.defineProperty(o, k2, desc);
9
+ }) : (function(o, m, k, k2) {
10
+ if (k2 === undefined) k2 = k;
11
+ o[k2] = m[k];
12
+ }));
13
+ var __exportStar = (this && this.__exportStar) || function(m, exports) {
14
+ for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
15
+ };
16
+ Object.defineProperty(exports, "__esModule", { value: true });
17
+ __exportStar(require("./FhirSearchResponse.js"), exports);
18
+ __exportStar(require("./FhirPatchRequestBodyItem.js"), exports);
19
+ __exportStar(require("./FhirBundle.js"), exports);
20
+ __exportStar(require("./FhirResource.js"), exports);
21
+ __exportStar(require("./ErrorResponse.js"), exports);
@@ -0,0 +1,161 @@
1
+ /**
2
+ * This file was auto-generated by Fern from our API Definition.
3
+ */
4
+ import * as environments from "../../../../environments.js";
5
+ import * as core from "../../../../core/index.js";
6
+ import * as phenoml from "../../../index.js";
7
+ export declare namespace FhirProvider {
8
+ interface Options {
9
+ environment?: core.Supplier<environments.phenomlEnvironment | string>;
10
+ /** Specify a custom URL to connect the client to. */
11
+ baseUrl?: core.Supplier<string>;
12
+ token?: core.Supplier<core.BearerToken | undefined>;
13
+ /** Additional headers to include in requests. */
14
+ headers?: Record<string, string | core.Supplier<string | null | undefined> | null | undefined>;
15
+ fetcher?: core.FetchFunction;
16
+ }
17
+ interface RequestOptions {
18
+ /** The maximum time to wait for a response in seconds. */
19
+ timeoutInSeconds?: number;
20
+ /** The number of times to retry the request. Defaults to 2. */
21
+ maxRetries?: number;
22
+ /** A hook to abort the request. */
23
+ abortSignal?: AbortSignal;
24
+ /** Additional query string parameters to include in the request. */
25
+ queryParams?: Record<string, unknown>;
26
+ /** Additional headers to include in the request. */
27
+ headers?: Record<string, string | core.Supplier<string | null | undefined> | null | undefined>;
28
+ }
29
+ }
30
+ export declare class FhirProvider {
31
+ protected readonly _options: FhirProvider.Options;
32
+ constructor(_options?: FhirProvider.Options);
33
+ /**
34
+ * Creates a new FHIR provider configuration with authentication credentials
35
+ *
36
+ * @param {phenoml.fhirProvider.FhirProviderCreateRequest} request
37
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
38
+ *
39
+ * @throws {@link phenoml.fhirProvider.BadRequestError}
40
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
41
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
42
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
43
+ *
44
+ * @example
45
+ * await client.fhirProvider.create({
46
+ * name: "Epic Sandbox",
47
+ * provider: "athenahealth",
48
+ * auth_method: "client_secret",
49
+ * base_url: "https://fhir.epic.com/interconnect-fhir-oauth/api/FHIR/R4"
50
+ * })
51
+ */
52
+ create(request: phenoml.fhirProvider.FhirProviderCreateRequest, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderResponse>;
53
+ private __create;
54
+ /**
55
+ * Retrieves a list of all active FHIR providers for the authenticated user
56
+ *
57
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
58
+ *
59
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
60
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
61
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
62
+ *
63
+ * @example
64
+ * await client.fhirProvider.list()
65
+ */
66
+ list(requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderListResponse>;
67
+ private __list;
68
+ /**
69
+ * Retrieves a specific FHIR provider configuration by its ID
70
+ *
71
+ * @param {string} fhirProviderId - ID of the FHIR provider to retrieve
72
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
73
+ *
74
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
75
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
76
+ * @throws {@link phenoml.fhirProvider.NotFoundError}
77
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
78
+ *
79
+ * @example
80
+ * await client.fhirProvider.get("fhir_provider_id")
81
+ */
82
+ get(fhirProviderId: string, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderResponse>;
83
+ private __get;
84
+ /**
85
+ * Soft deletes a FHIR provider by setting is_active to false
86
+ *
87
+ * @param {string} fhirProviderId - ID of the FHIR provider to delete
88
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
89
+ *
90
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
91
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
92
+ * @throws {@link phenoml.fhirProvider.NotFoundError}
93
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
94
+ *
95
+ * @example
96
+ * await client.fhirProvider.delete("fhir_provider_id")
97
+ */
98
+ delete(fhirProviderId: string, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderDeleteResponse>;
99
+ private __delete;
100
+ /**
101
+ * Adds a new authentication configuration to an existing FHIR provider. This enables key rotation and multiple auth configurations per provider.
102
+ *
103
+ * @param {string} fhirProviderId - ID of the FHIR provider to add auth config to
104
+ * @param {phenoml.fhirProvider.FhirProviderAddAuthConfigRequest} request
105
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
106
+ *
107
+ * @throws {@link phenoml.fhirProvider.BadRequestError}
108
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
109
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
110
+ * @throws {@link phenoml.fhirProvider.NotFoundError}
111
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
112
+ *
113
+ * @example
114
+ * await client.fhirProvider.addAuthConfig("1716d214-de93-43a4-aa6b-a878d864e2ad", {
115
+ * auth_method: "client_secret"
116
+ * })
117
+ */
118
+ addAuthConfig(fhirProviderId: string, request: phenoml.fhirProvider.FhirProviderAddAuthConfigRequest, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderResponse>;
119
+ private __addAuthConfig;
120
+ /**
121
+ * Sets which authentication configuration should be active for a FHIR provider. Only one auth config can be active at a time.
122
+ *
123
+ * @param {string} fhirProviderId - ID of the FHIR provider
124
+ * @param {phenoml.fhirProvider.FhirProviderSetActiveAuthConfigRequest} request
125
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
126
+ *
127
+ * @throws {@link phenoml.fhirProvider.BadRequestError}
128
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
129
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
130
+ * @throws {@link phenoml.fhirProvider.NotFoundError}
131
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
132
+ *
133
+ * @example
134
+ * await client.fhirProvider.setActiveAuthConfig("1716d214-de93-43a4-aa6b-a878d864e2ad", {
135
+ * auth_config_id: "auth-config-123"
136
+ * })
137
+ */
138
+ setActiveAuthConfig(fhirProviderId: string, request: phenoml.fhirProvider.FhirProviderSetActiveAuthConfigRequest, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderSetActiveAuthConfigResponse>;
139
+ private __setActiveAuthConfig;
140
+ /**
141
+ * Removes an authentication configuration from a FHIR provider. Cannot remove the currently active auth configuration.
142
+ *
143
+ * @param {string} fhirProviderId - ID of the FHIR provider
144
+ * @param {phenoml.fhirProvider.FhirProviderRemoveAuthConfigRequest} request
145
+ * @param {FhirProvider.RequestOptions} requestOptions - Request-specific configuration.
146
+ *
147
+ * @throws {@link phenoml.fhirProvider.BadRequestError}
148
+ * @throws {@link phenoml.fhirProvider.UnauthorizedError}
149
+ * @throws {@link phenoml.fhirProvider.ForbiddenError}
150
+ * @throws {@link phenoml.fhirProvider.NotFoundError}
151
+ * @throws {@link phenoml.fhirProvider.InternalServerError}
152
+ *
153
+ * @example
154
+ * await client.fhirProvider.removeAuthConfig("1716d214-de93-43a4-aa6b-a878d864e2ad", {
155
+ * auth_config_id: "auth-config-123"
156
+ * })
157
+ */
158
+ removeAuthConfig(fhirProviderId: string, request: phenoml.fhirProvider.FhirProviderRemoveAuthConfigRequest, requestOptions?: FhirProvider.RequestOptions): core.HttpResponsePromise<phenoml.fhirProvider.FhirProviderRemoveAuthConfigResponse>;
159
+ private __removeAuthConfig;
160
+ protected _getAuthorizationHeader(): Promise<string | undefined>;
161
+ }