peeksafe 0.3.0 → 0.4.1

package/CHANGELOG.md

@@ -6,6 +6,65 @@ All notable changes to this project are documented here. The format follows
 
 ## Unreleased
 
+## 0.4.1 (2026-11-06)
+
+### Fixed
+
+- `clusterKeyDiagnostic` compared only the lengths of its two groupings, so two groupings of different
+  values got a verdict comparing two unrelated suites. It now refuses them with `PEEKSAFE_E_STAT_DOMAIN`
+  unless both carry the same values, in any order.
+
+## 0.4.0 (2026-11-05)
+
+### Added
+
+- `docs/recipes.md`: tested modules that turn promptfoo's JSON output, Vitest JSON reports and one JSON
+  line per run into the counts `gate` takes, with a CI script and a baseline script, linked from the
+  README's quick start.
+- `gateReport(result)` and the `GateReport`, `CaseReport` and `JsonNumber` types: the gate result as
+  JSON can carry it, with non-finite numbers written as strings.
+
+### Changed
+
+- The npm `keywords` add `eval`, `llm-evals`, `regression-testing`, `flaky-tests`, `ab-testing`,
+  `benjamini-hochberg`, `e-bh`, `early-stopping` and `significance`, the terms people search when an eval
+  suite is flaky or a gate needs a multiple-testing correction.
+
+### Fixed
+
+- `JSON.stringify` wrote a paired case's `ceiling` of `Infinity` as `null`, so a CI artifact read "no
+  ceiling" where the truth is "no limit". A gate result's `toJSON` now writes `"Infinity"`, `"-Infinity"`
+  and `"NaN"` as strings, which `Number()` reads back.
+- The README and the doc comment on `PlanCase.baselineRunsNeeded` read it as how many baseline runs
+  to add. It is the smallest total baseline size at which the unpaired design works, and a floor: a few
+  runs more can fall back under the bar. The README planning table's 75 and 63 are 15 and 3 more runs.
+- `groupByCluster` refused a non-finite value as `clustered mean`, a name no export has, and
+  `clusterRobustMean`, `randomEffectsMean`, `clusteredEffect` and `clusterKeyDiagnostic` inherited that
+  message. `clusteredEffect` also refused a bad `level` as `clusterRobustMean`. Each now names itself.
+- `typeOneError` checked only `rate` and refused every other bad option (`alpha`, `horizon`,
+  `baselineTrials`, `mde`, `altConcentration`, `evidence`) as `certifyProbability`. It now names itself
+  in those refusals.
+- `betaPosterior` let an infinite prior shape through its positivity check, so a prior of
+  `{ alpha: Infinity, beta: 1 }` came back with `NaN` for `mean`, `mode`, `variance` and `sd`, and an
+  infinite `beta` with a mean of 0. It now refuses a prior shape that is not finite and positive with
+  `PEEKSAFE_E_STAT_DOMAIN`, as `betaQuantile` and `ibeta` already did.
+- `gate` read only the counts of a case's `baseline` and never compared `baseline.caseId` with the
+  case's `id`, so a baseline joined to the wrong case was gated against without a word. It now refuses a
+  case whose baseline names another case with `PEEKSAFE_E_CONFIG`.
+- `erf`, `normalCdf`, `logBetaPdf`, `evidenceCeilingLogE`, `evidenceCeilingAsymptotic` and
+  `universalTwoSampleLogE` refused a bad argument in the name of the helper they call (`gammaP`,
+  `logGamma`, `twoSamplePriors`), so the message pointed at a call the caller never made. Each now
+  checks its own arguments first and names itself in the refusal.
+- `expectedLogE` refused a bad baseline count, `mde` or `altConcentration` as `twoSamplePriors`. It now
+  checks them first and names itself in the refusal.
+- `expectedLogEExact` refused a bad baseline count, `mde` or `altConcentration` as `twoSampleLogE`, and
+  `samplesForEvidence` refused a bad `pTrue`, baseline count, `mde` or `altConcentration` as
+  `evidenceCeilingLogE`. Both now check them first and name themselves in the refusal.
+- `mcnemarSamplesForEvidence` refused a bad `pBaseline`, `mde` or `rho` as `pairedDiscordance`, and
+  `betaCredibleInterval` and `betaMassBetween` refused a posterior whose `alpha` or `beta` is not finite
+  and positive as `betaQuantile` and `ibeta`. All three now check them first and name themselves in the
+  refusal.
+
 ## 0.3.0 (2026-11-03)
 
 ### Added

package/README.md

@@ -2,12 +2,32 @@
 
 Statistically valid gates for non-deterministic eval suites. Stop early without losing error control.
 
+It is for teams that gate CI or releases on LLM or other non-deterministic eval suites and stop runs early to save cost.
+
 ```bash
 npm install peeksafe
 ```
 
 Zero runtime dependencies. TypeScript, ESM, Node 22 or newer.
 
+**Contents:**
+[The problem](#the-problem) ·
+[The part that is genuinely counterintuitive](#the-part-that-is-genuinely-counterintuitive) ·
+[What it costs, measured](#what-it-costs-measured) ·
+[Quick start](#quick-start) ·
+[Use it in CI](#use-it-in-ci) ·
+[Stopping early](#stopping-early) ·
+[When more runs will not help](#when-more-runs-will-not-help) ·
+[Planning: how many runs do I need](#planning-how-many-runs-do-i-need) ·
+[The paired alternative](#the-paired-alternative) ·
+[Suites are not independent draws](#suites-are-not-independent-draws) ·
+[What it refuses to do](#what-it-refuses-to-do) ·
+[API](#api) ·
+[Reproducing the numbers](#reproducing-the-numbers) ·
+[What this is not](#what-this-is-not) ·
+[References](#references) ·
+[Licence](#licence)
+
 ## The problem
 
 You have an eval suite. Each case is non-deterministic, so you run it several times and compare a pass rate against a recorded baseline. Runs cost money, so you watch results arrive and stop a case once it looks decided. Then you correct for multiplicity with Benjamini-Hochberg, because 200 cases at 5% each is a lot of false alarms.
@@ -69,6 +89,8 @@ result.newCases;                     // ['summary/new-case']
 
 `mde` is the drop, in rate, that counts as a regression. `fdr` is the false discovery rate you are willing to accept across the whole suite. Both default to the values above.
 
+Already running promptfoo or Vitest? The [recipes](docs/recipes.md) turn their result files, or one JSON line per run from a runner of your own, into these counts.
+
 ### Reading a case verdict
 
 Every case comes back with the evidence behind its decision, not just the decision:
@@ -92,7 +114,7 @@ result.soloThreshold;  // the bar a case clears on its own evidence, whatever th
 
 ## Use it in CI
 
-The whole integration is an exit code and a report.
+The whole integration is an exit code and a report. Building it with a coding agent? `npx skills add sferarc/peeksafe` installs the [`peeksafe-gate` skill](skills/peeksafe-gate/SKILL.md), which carries this script, the counts it needs and `makePlan`.
 
 ```ts
 import { gate, PeeksafeError } from 'peeksafe';
@@ -114,11 +136,12 @@ try {
   }
   for (const id of result.newCases) console.log(`NEW ${id}: no baseline, not gated`);
 
-  process.exit(result.verdict === 'FAIL' ? 1 : 0);
+  // exitCode rather than exit(), which can cut off piped output on macOS.
+  process.exitCode = result.verdict === 'FAIL' ? 1 : 0;
 } catch (e) {
   // A refusal is a bug in the harness, not a regression. Do not let it read as a pass.
   if (e instanceof PeeksafeError) console.error(`${e.code}: ${e.message}\n${e.hint ?? ''}`);
-  process.exit(2);
+  process.exitCode = 2;
 }
 ```
 
@@ -131,6 +154,8 @@ budget (thin), which needs more baseline runs, not more candidate runs; 1 case(s
 and were not gated (new).
 ```
 
+To keep the result as a CI artifact, write `JSON.stringify(result)`. JSON has no `Infinity`, and a plain object would have a paired case's `ceiling` (no limit) written as `null`, so the result's `toJSON` writes every non-finite number as the string `"Infinity"`, `"-Infinity"` or `"NaN"`, which `Number()` reads back. The shape is `GateReport`: a `GateResult` whose cases are `CaseReport`s, with `ceiling` and `logE` typed `JsonNumber`. A copy made with a spread (`{ ...result }`) drops `toJSON`; pass the result through `gateReport(result)` first, which returns the same JSON safe object.
+
 ## Stopping early
 
 This is the reason the library exists. Stop each case whenever you like, for any reason, including "it already looks bad". The guarantee does not depend on the rule you used, because the statistic is an e-value rather than a p-value: a non-negative statistic with mean at most 1 under the null, so Ville's inequality bounds `P(sup_n E_n >= 1/a) <= a` over the whole trajectory. The multiplicity correction is e-BH (Wang and Ramdas), which consumes e-values directly and controls FDR under arbitrary dependence between cases.
@@ -295,7 +320,7 @@ for (const c of plan.cases) {
   c.detectability;        // 'UNPAIRED' | 'PAIRED_ONLY' | 'TOO_EXPENSIVE' | 'IMPOSSIBLE'
   c.unpaired.runs;        // what the default design costs, or Infinity
   c.paired.pairs;         // what the paired design costs
-  c.baselineRunsNeeded;   // baseline runs that would make unpaired work, or null
+  c.baselineRunsNeeded;   // smallest total baseline that makes unpaired work, or null
   c.design;               // 'unpaired' | 'paired' | null, the cheaper design that decides it
 }
 ```
@@ -309,7 +334,7 @@ summary/tone       IMPOSSIBLE     unpaired=Infinity paired=Infinity needBaseline
 search/rerank      PAIRED_ONLY    unpaired=Infinity paired=   53 needBaseline=63
 ```
 
-Read that as four different answers, not one number. `parsing/nested` has a 240-run baseline and needs 93 candidate runs. `routing/fallback` and `search/rerank` have thin baselines, so the unpaired design cannot do them at any budget, but 75 and 63 more baseline runs respectively would fix that, and pairing works today. `summary/tone` passes 10% of the time and cannot lose 15 points at all, so `sampleSizeTwoProportion(0.1, 0.15)` is `Infinity` rather than a plausible-looking 44.
+Read that as four different answers, not one number. `parsing/nested` has a 240-run baseline and needs 93 candidate runs. `routing/fallback` and `search/rerank` have thin baselines, so the unpaired design cannot do them at any budget, but baselines of 75 and 63 runs in total (15 and 3 more) would fix that, and pairing works today. `baselineRunsNeeded` is a floor, not a threshold: the ceiling is a sawtooth in the baseline size, so a few runs past it can fall back under the bar. `summary/tone` passes 10% of the time and cannot lose 15 points at all, so `sampleSizeTwoProportion(0.1, 0.15)` is `Infinity` rather than a plausible-looking 44.
 
 `plan.totals` carries the suite-level roll-up, including `decidableUnpaired` and `decidableBest`: how many cases each design can decide at all.
 
@@ -450,7 +475,7 @@ A case with no baseline is not an error, though. It comes back in `newCases`, ta
 
 Four layers. Most callers need the first.
 
-**The decision.** `gate` for a whole suite from final counts or pair tables, `shouldStop` and `shouldStopPaired` for one case mid-run, and the types around them.
+**The decision.** `gate` for a whole suite from final counts or pair tables, `gateReport` for its result as JSON can carry it, `shouldStop` and `shouldStopPaired` for one case mid-run, and the types around them.
 
 **The budget.** `makePlan`, `planCase`, `affordabilityGrid`, `computeFrontier`, `enumerateFrontier`.
 

package/dist/check.d.ts.map

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package/dist/check.js

@@ -21,22 +21,25 @@ import { logBeta, logGamma, pairedLogE, twoSamplePriors } from "./stats.js";
  * baseline at a horizon of 600 takes tens of milliseconds.
  */
 export function certifyProbability(options) {
+    return certify(options, "certifyProbability");
+}
+function certify(options, where) {
     const { baselineRate, candidateRate: pc, baselineTrials: nb, alpha, horizon } = options;
     const mde = options.mde ?? DEFAULT_GATE_OPTIONS.mde;
     const concentration = options.altConcentration ?? DEFAULT_GATE_OPTIONS.altConcentration;
     const evidence = options.evidence ?? DEFAULT_GATE_OPTIONS.evidence;
-    requireEvidence(evidence, "certifyProbability");
-    requireOpenProbability(baselineRate, "baselineRate", "certifyProbability");
-    requireOpenProbability(pc, "candidateRate", "certifyProbability");
-    requireOpenProbability(alpha, "alpha", "certifyProbability");
-    requireOpenProbability(mde, "mde", "certifyProbability");
-    requirePositiveConfig(concentration, "altConcentration", "certifyProbability");
+    requireEvidence(evidence, where);
+    requireOpenProbability(baselineRate, "baselineRate", where);
+    requireOpenProbability(pc, "candidateRate", where);
+    requireOpenProbability(alpha, "alpha", where);
+    requireOpenProbability(mde, "mde", where);
+    requirePositiveConfig(concentration, "altConcentration", where);
     for (const [name, v] of [
         ["baselineTrials", nb],
         ["horizon", horizon],
     ]) {
         if (!Number.isInteger(v) || v < 1) {
-            throw new PeeksafeError("PEEKSAFE_E_CONFIG", `certifyProbability: ${name} must be a positive integer, got ${v}`, {
+            throw new PeeksafeError("PEEKSAFE_E_CONFIG", `${where}: ${name} must be a positive integer, got ${v}`, {
                 detail: { [name]: v },
             });
         }
@@ -116,7 +119,7 @@ function universalFromBayes(rawLog, s, n, sb, nb) {
 export function typeOneError(options) {
     const { rate, ...rest } = options;
     requireOpenProbability(rate, "rate", "typeOneError");
-    return certifyProbability({ ...rest, baselineRate: rate, candidateRate: rate });
+    return certify({ ...rest, baselineRate: rate, candidateRate: rate }, "typeOneError");
 }
 /**
  * `certifyProbability` for a paired case: the exact probability it is certified within

package/dist/check.js.map

@@ -1 +1 @@
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package/dist/cluster.d.ts.map

@@ -1 +1 @@
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package/dist/cluster.js

@@ -119,10 +119,13 @@ function requireLevel(level, where) {
 }
 /** Group observations by cluster, preserving first-seen order. */
 export function groupByCluster(obs) {
+    return group(obs, "groupByCluster");
+}
+function group(obs, where) {
     const m = new Map();
     for (const o of obs) {
         if (!Number.isFinite(o.value)) {
-            throw new PeeksafeError("PEEKSAFE_E_STAT_DOMAIN", `clustered mean: value for cluster "${o.cluster}" is not finite`, {
+            throw new PeeksafeError("PEEKSAFE_E_STAT_DOMAIN", `${where}: value for cluster "${o.cluster}" is not finite`, {
                 detail: { cluster: o.cluster, value: o.value },
             });
         }
@@ -165,7 +168,7 @@ export function iidMean(values, level = 0.95) {
  */
 export function clusterRobustMean(obs, level = 0.95) {
     requireLevel(level, "clusterRobustMean");
-    const groups = groupByCluster(obs);
+    const groups = group(obs, "clusterRobustMean");
     const n = obs.length;
     const G = groups.size;
     const sizes = [...groups.values()].map((xs) => xs.length);
@@ -273,7 +276,7 @@ export function clusterRobustMean(obs, level = 0.95) {
  */
 export function randomEffectsMean(obs, level = 0.95) {
     requireLevel(level, "randomEffectsMean");
-    const groups = groupByCluster(obs);
+    const groups = group(obs, "randomEffectsMean");
     const n = obs.length;
     const G = groups.size;
     const grand = n > 0 ? obs.reduce((a, o) => a + o.value, 0) / n : 0;
@@ -390,10 +393,12 @@ const fmtPts = (x) => `${x >= 0 ? "+" : ""}${(x * 100).toFixed(1)}`;
  * a reader would conclude.
  */
 export function clusteredEffect(obs, level = 0.95) {
+    // Checked before the estimators below, which would refuse the same input in their own names.
+    requireLevel(level, "clusteredEffect");
+    const groups = group(obs, "clusteredEffect");
     const cr2 = clusterRobustMean(obs, level);
     const re = randomEffectsMean(obs, level);
     const naive = iidMean(obs.map((o) => o.value), level);
-    const groups = groupByCluster(obs);
     const families = [...groups.entries()]
         .map(([family, xs]) => {
         const m = xs.reduce((a, x) => a + x, 0) / xs.length;
@@ -512,6 +517,21 @@ export function clusterKeyDiagnostic(declared, fallback) {
             hint: "group the same value array twice; do not filter one of them",
         });
     }
+    group(declared, "clusterKeyDiagnostic");
+    group(fallback, "clusterKeyDiagnostic");
+    // Compared as sorted lists so a caller may build the two groupings in different orders.
+    const declaredValues = declared.map((o) => o.value).sort((x, y) => x - y);
+    const fallbackValues = fallback.map((o) => o.value).sort((x, y) => x - y);
+    const mismatch = declaredValues.findIndex((v, i) => v !== fallbackValues[i]);
+    if (mismatch !== -1) {
+        throw new PeeksafeError("PEEKSAFE_E_STAT_DOMAIN", "clusterKeyDiagnostic: the two groupings must cover the same observations (their values differ)", {
+            detail: {
+                declared: declaredValues[mismatch],
+                fallback: fallbackValues[mismatch],
+            },
+            hint: "group the same value array twice; do not filter one of them",
+        });
+    }
     const d = summarise("declared", declared);
     const f = summarise("case-id", fallback);
     // A grouping with fewer than two clusters has no estimable between-family

package/dist/cluster.js.map

@@ -1 +1 @@
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package/dist/gate.d.ts

@@ -164,6 +164,24 @@ export interface GateResult {
      */
     headline: string;
 }
+/** A number as JSON can hold it: finite as is, the rest as the string `String` gives, which `Number` reads back. */
+export type JsonNumber = number | "Infinity" | "-Infinity" | "NaN";
+/** A `CaseVerdict` as `gateReport` writes it. A paired case's `ceiling` is `"Infinity"`. */
+export type CaseReport = Omit<CaseVerdict, "ceiling" | "logE"> & {
+    ceiling: JsonNumber;
+    logE: JsonNumber;
+};
+/** A `GateResult` as `gateReport` writes it, and as `JSON.stringify(result)` does. */
+export type GateReport = Omit<GateResult, "cases" | "regressed"> & {
+    cases: CaseReport[];
+    regressed: CaseReport[];
+};
+/**
+ * A copy of `result` that survives JSON: `JSON.stringify` writes `Infinity` as
+ * `null`, which a reader of a CI artifact takes for "no ceiling" where the truth
+ * is "no limit". Every non-finite number becomes a string instead.
+ */
+export declare function gateReport(result: GateResult): GateReport;
 /**
  * Decide which cases regressed.
  *

package/dist/gate.d.ts.map

@@ -1 +1 @@
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package/dist/gate.js

@@ -65,6 +65,24 @@ export const DEFAULT_GATE_OPTIONS = {
     altConcentration: 8,
     evidence: "bayes",
 };
+const jsonSafe = (v) => {
+    if (typeof v === "number")
+        return Number.isFinite(v) ? v : String(v);
+    if (Array.isArray(v))
+        return v.map(jsonSafe);
+    if (v !== null && typeof v === "object") {
+        return Object.fromEntries(Object.entries(v).map(([k, x]) => [k, jsonSafe(x)]));
+    }
+    return v;
+};
+/**
+ * A copy of `result` that survives JSON: `JSON.stringify` writes `Infinity` as
+ * `null`, which a reader of a CI artifact takes for "no ceiling" where the truth
+ * is "no limit". Every non-finite number becomes a string instead.
+ */
+export function gateReport(result) {
+    return jsonSafe(result);
+}
 /**
  * Decide which cases regressed.
  *
@@ -92,8 +110,16 @@ export function gate(cases, options = {}) {
             continue;
         }
         requireCounts(c.successes, c.trials, `gate(${c.id})`);
-        if (c.baseline)
-            requireCounts(c.baseline.successes, c.baseline.trials, `gate(${c.id}).baseline`);
+        if (!c.baseline)
+            continue;
+        // Only the counts are read, so a baseline joined to the wrong case was gated against without a word.
+        if (c.baseline.caseId !== c.id) {
+            throw new PeeksafeError("PEEKSAFE_E_CONFIG", `gate: case ${c.id} carries the baseline of case ${c.baseline.caseId}`, {
+                detail: { id: c.id, baselineCaseId: c.baseline.caseId },
+                hint: "join baselines to cases by id, e.g. toBaselineMap(baselines).get(c.id)",
+            });
+        }
+        requireCounts(c.baseline.successes, c.baseline.trials, `gate(${c.id}).baseline`);
     }
     const hasBaseline = (c) => c.paired !== undefined || (c.baseline !== undefined && c.baseline.trials > 0);
     const newCases = cases.filter((c) => !hasBaseline(c)).map((c) => c.id);
@@ -186,7 +212,7 @@ export function gate(cases, options = {}) {
                 .map((v) => v.id)
                 .join(", ")}${regressed.length > 3 ? ", …" : ""})`) +
         (caveats.length > 0 ? `. Read with care: ${caveats.join("; ")}.` : "");
-    return {
+    const result = {
         verdict: regressed.length === 0 ? "PASS" : "FAIL",
         cases: verdicts,
         regressed,
@@ -196,5 +222,8 @@ export function gate(cases, options = {}) {
         options: opts,
         headline,
     };
+    // Not enumerable, so equality checks and spreads see only the fields.
+    Object.defineProperty(result, "toJSON", { value: () => gateReport(result) });
+    return result;
 }
 //# sourceMappingURL=gate.js.map

package/dist/gate.js.map

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package/dist/index.d.ts

@@ -11,6 +11,7 @@
  * ## 1. The decision
  *
  *   gate(cases, options)   which cases regressed, valid at any stopping time
+ *   gateReport(result)     the same verdict with Infinity kept through JSON
  *
  * You bring counts. It brings e-values and e-BH. Nothing here knows or cares how
  * you ran the evals, and nothing here will gate a case that has no baseline.
@@ -52,7 +53,7 @@ export { type ClusteredEffect, type ClusteredMean, type ClusterKeyDiagnostic, ty
 export { MAX_ALT_CONCENTRATION, PeeksafeError, type PeeksafeErrorCode, type PeeksafeErrorOptions, } from "./errors.js";
 export type { Evidence } from "./evidence.js";
 export { computeFrontier, costShares, DEFAULT_AXES, DEFAULT_FRONTIER, enumerateFrontier, evaluatePoint, type FrontierAxes, type FrontierBasis, type FrontierCell, type FrontierConfig, type FrontierCost, type FrontierDesign, type FrontierPoint, type FrontierResult, type FrontierScreen, fmtRate, typicalObservationsPerCase, } from "./frontier.js";
-export { type CaseVerdict, DEFAULT_GATE_OPTIONS, type GateCase, type GateOptions, type GateResult, gate, type PairedGateCase, } from "./gate.js";
+export { type CaseReport, type CaseVerdict, DEFAULT_GATE_OPTIONS, type GateCase, type GateOptions, type GateReport, type GateResult, gate, gateReport, type JsonNumber, type PairedGateCase, } from "./gate.js";
 export { type AffordabilityCell, affordabilityGrid, DEFAULT_PLAN, type Detectability, expectedSequentialSamples, makePlan, type Plan, type PlanCase, type PlanConfig, type PlanTotals, planCase, } from "./plan.js";
 export { hash32, makeRand, type Rand, streamFor } from "./rand.js";
 export { type BetaPosterior, type BhResult, bernoulliEntropy, betaCredibleInterval, betaMassBetween, betaPosterior, betaQuantile, bhCorrect, cohensH, diffInterval, discordant, type EbhResult, ebhCorrect, ebhSoloThreshold, erf, evidenceCeilingAsymptotic, evidenceCeilingLogE, evidenceCeilingSlope, expectedLogE, expectedLogEExact, fisherExact2x2, gammaP, type Interval, ibeta, logBeta, logBetaPdf, logGamma, logMarginalBetaBinomial, mcnemarSamplesForEvidence, normalCdf, normalQuantile, type PairedCounts, pairedDiscordance, pairedLogE, pairPhi, probabilityMoved, type SprtDecision, type SprtOpts, type SprtResult, sampleSizeTwoProportion, samplesForEvidence, sprtDecision, sprtExpectedN, type TestResult, twoProportionZTest, twoSampleLogE, twoSamplePriors, universalCeilingLogE, universalTwoSampleLogE, wilsonInterval, } from "./stats.js";

package/dist/index.d.ts.map

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