patchwork-os 0.2.0-beta.1 → 0.2.0-beta.10.canary.95

package/dist/resources.js

@@ -7,6 +7,7 @@
  */
 import fs from "node:fs";
 import path from "node:path";
+import { fileURLToPath, pathToFileURL } from "node:url";
 import { mimeTypeFromPath } from "./tools/utils.js";
 const RESOURCES_PAGE_SIZE = 50;
 const MAX_RESOURCE_BYTES = 1 * 1024 * 1024; // 1 MB — same guard as getBufferContent
@@ -101,10 +102,13 @@ function collectWorkspaceFiles(workspace) {
     return results;
 }
 function fileToResource(absPath, workspace) {
-    const relPath = absPath.startsWith(workspace + path.sep)
-        ? absPath.slice(workspace.length + 1)
-        : absPath;
-    const uri = `file://${absPath}`;
+    // Case-insensitive prefix match on Windows; preserve the original-case
+    // path for the relative slice so the displayed name matches the disk.
+    const matches = process.platform === "win32"
+        ? absPath.toLowerCase().startsWith(workspace.toLowerCase() + path.sep)
+        : absPath.startsWith(workspace + path.sep);
+    const relPath = matches ? absPath.slice(workspace.length + 1) : absPath;
+    const uri = pathToFileURL(absPath).href;
     return {
         uri,
         name: relPath,
@@ -172,23 +176,26 @@ export function readResource(workspace, uri) {
     if (!uri.startsWith("file://")) {
         return { error: "Only file:// URIs are supported", code: "invalid_args" };
     }
-    // Decode percent-encoding before resolving — paths with spaces are encoded
-    // as "file:///my%20dir/file.ts" and must be decoded or the workspace check fails.
+    // Use fileURLToPath so Windows-shaped URIs (`file:///C:/...`) and
+    // percent-encoded paths round-trip correctly on every platform.
     let rawPath;
     try {
-        rawPath = decodeURIComponent(uri.slice(7)); // strip "file://" then decode
+        rawPath = fileURLToPath(uri);
     }
     catch {
         return {
-            error: `URI "${uri}" contains invalid percent-encoding`,
+            error: `URI "${uri}" is not a valid file URL`,
             code: "invalid_args",
         };
     }
     const absPath = path.resolve(rawPath);
     const normalizedWorkspace = path.resolve(workspace);
-    // Workspace confinement
-    if (absPath !== normalizedWorkspace &&
-        !absPath.startsWith(normalizedWorkspace + path.sep)) {
+    // Workspace confinement — case-insensitive on Windows (NTFS).
+    const cmpA = process.platform === "win32" ? absPath.toLowerCase() : absPath;
+    const cmpB = process.platform === "win32"
+        ? normalizedWorkspace.toLowerCase()
+        : normalizedWorkspace;
+    if (cmpA !== cmpB && !cmpA.startsWith(cmpB + path.sep)) {
         return {
             error: `URI "${uri}" is outside the workspace`,
             code: "workspace_escape",
@@ -229,8 +236,9 @@ export function readResource(workspace, uri) {
     catch {
         return { error: `Resource not found: ${uri}`, code: "file_not_found" };
     }
-    if (realPath !== realWorkspace &&
-        !realPath.startsWith(realWorkspace + path.sep)) {
+    const realA = process.platform === "win32" ? realPath.toLowerCase() : realPath;
+    const realB = process.platform === "win32" ? realWorkspace.toLowerCase() : realWorkspace;
+    if (realA !== realB && !realA.startsWith(realB + path.sep)) {
         return {
             error: `URI "${uri}" is outside the workspace`,
             code: "workspace_escape",

package/dist/resources.js.map

@@ -1 +1 @@
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package/dist/runLog.d.ts

@@ -19,6 +19,19 @@ export interface RunStepResult {
     tool?: string;
     status: "ok" | "skipped" | "error";
     error?: string;
+    /**
+     * One-sentence human-actionable halt reason. Populated only for error
+     * rows; present for runs produced by yamlRunner from this version
+     * onward. Older runs.jsonl rows round-trip unchanged. See StepResult in
+     * src/recipes/yamlRunner.ts for the construction sites.
+     */
+    haltReason?: string;
+    /**
+     * PR3a — judge-step verdict. Present only when the step was a
+     * `kind: "judge"` agent step. Augment-only: `request_changes` does
+     * NOT make `status: "error"`. Surfaced separately in dashboards.
+     */
+    judgeVerdict?: import("./recipes/judgeVerdict.js").JudgeVerdict;
     durationMs: number;
     /** Step-input params after `{{template}}` substitution. */
     resolvedParams?: unknown;
@@ -57,6 +70,15 @@ export interface RecipeRun {
     durationMs: number;
     /** Per-step execution results — present when run via yamlRunner or chainedRunner. */
     stepResults?: RunStepResult[];
+    /**
+     * True when the run finished `done` but at least one step ended with
+     * `status: "error"`. The runner continues past a non-fatal step
+     * error, so such a run is legitimately `done` — but flat-green
+     * "success" hides that a step failed. Consumers (the dashboard
+     * Overview) use this to render an honest "completed with errors"
+     * state. Absent / false = a clean run.
+     */
+    hadStepErrors?: boolean;
     /** seq of the parent run that triggered this one, if trigger === "recipe". */
     parentSeq?: number;
     /** Assertion failures from the recipe's expect block — present when assertions fail. */
@@ -66,6 +88,30 @@ export interface RecipeRun {
         actual: unknown;
         message: string;
     }>;
+    /**
+     * Stable id for one *logical* user-initiated execution attempt (PR5b
+     * prereq). Distinct from `seq` (which is per *physical* run row): a
+     * retry-after-failure of the same logical attempt re-uses the same
+     * `manualRunId` so the disk-backed WriteEffectLedger can scope dedup
+     * by `(recipeName, manualRunId)` and avoid replaying side effects.
+     *
+     * Optional — cron / webhook / nested-recipe trigger runs leave it
+     * unset. Caller-supplied (the CLI / dashboard mints it); the run log
+     * just round-trips the value.
+     */
+    manualRunId?: string;
+    /**
+     * Phase 0β provenance — files this run delivered to the inbox
+     * (`~/.patchwork/inbox/`). One entry per `file.write` step whose
+     * resolved path is inside the inbox dir; populated by yamlRunner.
+     * Lets the dashboard link a run to its produced inbox items
+     * without filename-string-munging. Optional + additive: pre-Phase-0β
+     * runs simply omit it.
+     */
+    inboxOutputs?: Array<{
+        filename: string;
+        deliveredAt: number;
+    }>;
 }
 export interface RunLogOptions {
     /** Directory holding runs.jsonl. Created if missing. */
@@ -83,6 +129,10 @@ export interface RunQuery {
     recipe?: string;
     /** Runs with seq > after. */
     after?: number;
+    /** Only return runs with createdAt >= since (ms epoch). */
+    since?: number;
+    /** PR5c — exact-match on manualRunId. Yields all retries of one attempt. */
+    manualRunId?: string;
 }
 export declare class RecipeRunLog {
     private readonly opts;
@@ -138,11 +188,12 @@ export declare class RecipeRunLog {
     appendDirect(run: Omit<RecipeRun, "seq">): void;
     /**
      * Begin a run. Allocates a monotonic seq, adds an in-memory entry with
-     * `status: "running"`, and returns the seq so the caller can correlate
-     * step events. The entry is NOT persisted to disk — running runs are
-     * ephemeral and don't survive a bridge restart (recipes-in-flight don't
-     * survive restart anyway). Use `completeRun(seq, …)` when the run finishes
-     * to upgrade the entry to a terminal status and persist it.
+     * `status: "running"`, persists it to disk immediately, and returns the seq
+     * so the caller can correlate step events. Persisting on start (rather than
+     * only on completion) means a bridge restart leaves a recoverable
+     * `status: "interrupted"` record instead of silently vanishing the run.
+     * Use `completeRun(seq, …)` when the run finishes to append the terminal
+     * record; `loadExisting()` sweeps any leftover `"running"` rows on startup.
      */
     startRun(opts: {
         taskId: string;
@@ -152,6 +203,7 @@ export declare class RecipeRunLog {
         startedAt?: number;
         model?: string;
         parentSeq?: number;
+        manualRunId?: string;
     }): number;
     /**
      * Replace the in-memory step list for a running entry. Called as steps
@@ -173,6 +225,7 @@ export declare class RecipeRunLog {
         outputTail?: string;
         errorMessage?: string;
         assertionFailures?: RecipeRun["assertionFailures"];
+        inboxOutputs?: RecipeRun["inboxOutputs"];
     }): void;
     private append;
     /**

package/dist/runLog.js

@@ -1,5 +1,6 @@
-import { appendFileSync, mkdirSync, readFileSync, statSync, writeFileSync, } from "node:fs";
+import { appendFileSync, mkdirSync, readFileSync, renameSync, statSync, unlinkSync, writeFileSync, } from "node:fs";
 import path from "node:path";
+import { withFileLockSync } from "./fileLockSync.js";
 const MAX_OUTPUT_TAIL = 2_000;
 const DEFAULT_MEMORY_CAP = 500;
 /**
@@ -103,19 +104,30 @@ export class RecipeRunLog {
     }
     query(q = {}) {
         this.syncFromDisk();
-        let out = this.runs;
-        if (q.trigger)
-            out = out.filter((r) => r.trigger === q.trigger);
-        if (q.status)
-            out = out.filter((r) => r.status === q.status);
-        if (q.recipe)
-            out = out.filter((r) => r.recipeName === q.recipe);
-        if (q.after !== undefined) {
-            const after = q.after;
-            out = out.filter((r) => r.seq > after);
+        const trigger = q.trigger;
+        const status = q.status;
+        const recipe = q.recipe;
+        const manualRunId = q.manualRunId;
+        const after = q.after;
+        const since = q.since;
+        const out = [];
+        for (const r of this.runs) {
+            if (trigger && r.trigger !== trigger)
+                continue;
+            if (status && r.status !== status)
+                continue;
+            if (recipe && r.recipeName !== recipe)
+                continue;
+            if (manualRunId && r.manualRunId !== manualRunId)
+                continue;
+            if (after !== undefined && r.seq <= after)
+                continue;
+            if (since !== undefined && r.createdAt < since)
+                continue;
+            out.push(r);
         }
         // Newest first.
-        out = [...out].sort((a, b) => b.seq - a.seq);
+        out.sort((a, b) => b.seq - a.seq);
         const limit = Math.min(Math.max(q.limit ?? 100, 1), 500);
         return out.slice(0, limit);
     }
@@ -143,7 +155,12 @@ export class RecipeRunLog {
     /** Return seqs of all in-memory runs whose parentSeq matches this seq. */
     getChildSeqs(parentSeq) {
         this.syncFromDisk();
-        return this.runs.filter((r) => r.parentSeq === parentSeq).map((r) => r.seq);
+        const result = [];
+        for (const r of this.runs) {
+            if (r.parentSeq === parentSeq)
+                result.push(r.seq);
+        }
+        return result;
     }
     readFromDiskBySeq(seq) {
         let raw;
@@ -175,7 +192,10 @@ export class RecipeRunLog {
     /** Write a run directly (e.g. from yamlRunner which has no orchestrator task). */
     appendDirect(run) {
         const seq = ++this.seq;
-        const full = { ...run, seq };
+        // Derive hadStepErrors the same way completeRun does, so the
+        // CLI / no-orchestrator path stays consistent with the bridge path.
+        const hadStepErrors = (run.stepResults ?? []).some((s) => s.status === "error");
+        const full = { ...run, seq, hadStepErrors };
         mkdirSync(path.dirname(this.file), { recursive: true, mode: 0o700 });
         this.append(full);
         this.runs.push(full);
@@ -184,11 +204,12 @@ export class RecipeRunLog {
     }
     /**
      * Begin a run. Allocates a monotonic seq, adds an in-memory entry with
-     * `status: "running"`, and returns the seq so the caller can correlate
-     * step events. The entry is NOT persisted to disk — running runs are
-     * ephemeral and don't survive a bridge restart (recipes-in-flight don't
-     * survive restart anyway). Use `completeRun(seq, …)` when the run finishes
-     * to upgrade the entry to a terminal status and persist it.
+     * `status: "running"`, persists it to disk immediately, and returns the seq
+     * so the caller can correlate step events. Persisting on start (rather than
+     * only on completion) means a bridge restart leaves a recoverable
+     * `status: "interrupted"` record instead of silently vanishing the run.
+     * Use `completeRun(seq, …)` when the run finishes to append the terminal
+     * record; `loadExisting()` sweeps any leftover `"running"` rows on startup.
      */
     startRun(opts) {
         const seq = ++this.seq;
@@ -207,10 +228,12 @@ export class RecipeRunLog {
             durationMs: 0,
             stepResults: [],
             ...(opts.parentSeq !== undefined && { parentSeq: opts.parentSeq }),
+            ...(opts.manualRunId !== undefined && { manualRunId: opts.manualRunId }),
         };
         this.runs.push(run);
         if (this.runs.length > this.memoryCap)
             this.runs.shift();
+        this.append(run);
         return seq;
     }
     /**
@@ -246,6 +269,10 @@ export class RecipeRunLog {
             doneAt: opts.doneAt,
             durationMs: opts.durationMs,
             stepResults: opts.stepResults,
+            // Derived, single source of truth: a run with any error-status
+            // step "completed with errors" even if its terminal status is
+            // `done` (the runner continues past non-fatal step errors).
+            hadStepErrors: opts.stepResults.some((s) => s.status === "error"),
             ...(opts.outputTail !== undefined && { outputTail: opts.outputTail }),
             ...(opts.errorMessage !== undefined && {
                 errorMessage: opts.errorMessage,
@@ -253,6 +280,10 @@ export class RecipeRunLog {
             ...(opts.assertionFailures !== undefined && {
                 assertionFailures: opts.assertionFailures,
             }),
+            ...(opts.inboxOutputs !== undefined &&
+                opts.inboxOutputs.length > 0 && {
+                inboxOutputs: opts.inboxOutputs,
+            }),
         };
         this.runs[idx] = finalized;
         mkdirSync(path.dirname(this.file), { recursive: true, mode: 0o700 });
@@ -272,7 +303,12 @@ export class RecipeRunLog {
                 if (code !== "ENOENT")
                     throw err;
             }
-            appendFileSync(this.file, `${JSON.stringify(run)}\n`, { mode: 0o600 });
+            // Per-file lock — ADR-0007 multi-bridge concurrency. See the
+            // matching block in src/decisionTraceLog.ts for the full
+            // rationale; same pattern.
+            withFileLockSync(this.file, () => {
+                appendFileSync(this.file, `${JSON.stringify(run)}\n`, { mode: 0o600 });
+            });
         }
         catch (err) {
             this.opts.logger?.warn?.(`[runlog] append failed: ${err instanceof Error ? err.message : String(err)}`);
@@ -307,9 +343,32 @@ export class RecipeRunLog {
                 lines = [];
                 joined = "";
             }
-            writeFileSync(this.file, joined.length > 0 ? `${joined}\n` : "", {
+            // Atomic write: temp file + rename. Crash / ENOSPC mid-write
+            // would otherwise truncate the entire run-log file at the source
+            // path. Matches the pattern used in sessionCheckpoint.write().
+            const tmp = `${this.file}.tmp`;
+            writeFileSync(tmp, joined.length > 0 ? `${joined}\n` : "", {
                 mode: 0o600,
             });
+            // On Windows renameSync throws EEXIST when target exists; POSIX replaces atomically.
+            try {
+                renameSync(tmp, this.file);
+            }
+            catch (renameErr) {
+                if (process.platform === "win32" &&
+                    renameErr.code === "EEXIST") {
+                    try {
+                        unlinkSync(this.file);
+                    }
+                    catch {
+                        /* best-effort */
+                    }
+                    renameSync(tmp, this.file);
+                }
+                else {
+                    throw renameErr;
+                }
+            }
             // Refresh `lastFileSize` so the next syncFromDisk() doesn't see
             // `size <= lastFileSize` (stale pre-rotation value) and silently
             // skip freshly-appended rows.
@@ -391,6 +450,24 @@ export class RecipeRunLog {
         if (this.runs.length > this.memoryCap) {
             this.runs.splice(0, this.runs.length - this.memoryCap);
         }
+        // Sweep: any run that is still `status:"running"` after loading was
+        // interrupted by a bridge restart. Flip in memory and append the
+        // corrected terminal record so future reads see "interrupted" instead
+        // of a permanently-stuck running entry.
+        const now = this.now();
+        for (let i = 0; i < this.runs.length; i++) {
+            const run = this.runs[i];
+            if (!run || run.status !== "running")
+                continue;
+            const interrupted = {
+                ...run,
+                status: "interrupted",
+                doneAt: now,
+                durationMs: now - run.createdAt,
+            };
+            this.runs[i] = interrupted;
+            this.append(interrupted);
+        }
     }
 }
 //# sourceMappingURL=runLog.js.map

package/dist/runLog.js.map

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package/dist/sanitizeParsedJson.d.ts

@@ -0,0 +1,39 @@
+/**
+ * Recursively strip prototype-pollution keys from a `JSON.parse` result
+ * before it lands in a shared map / merge target / runtime context.
+ *
+ * Why this is needed even though `JSON.parse` doesn't mutate
+ * `Object.prototype`:
+ *   V8 uses `Object.defineProperty(obj, "__proto__", { value, ... })` for
+ *   `JSON.parse('{"__proto__": {...}}')`, so the prototype chain itself
+ *   is unaffected at parse time. But the *own property* survives — and
+ *   any downstream `Object.assign(target, parsed)`, deep-merge, spread,
+ *   or `for...in` traversal that writes via bracket assignment will
+ *   re-introduce the pollution.
+ *
+ * The conservative move at every untrusted-JSON ingest boundary is to
+ * walk the parse result and drop the three dangerous keys
+ * (`__proto__`, `constructor`, `prototype`) recursively.
+ *
+ * See PR #568 + `feedback_record_string_prototype_walk.md` for the
+ * underlying class of bugs. Originally local to
+ * `src/recipes/yamlRunner.ts`; this module is the shared home.
+ */
+/**
+ * Strip `__proto__` / `constructor` / `prototype` own-property keys
+ * recursively from `value`. Returns a plain JSON-safe shape (objects
+ * become `Record<string, unknown>` with the dangerous keys absent;
+ * arrays mapped element-wise; primitives returned as-is).
+ *
+ * This is a clone, not an in-place mutation. The original parse result
+ * is left untouched, so callers can apply this lazily and the eager
+ * shape (e.g. when the parse result is also used for fast-path
+ * comparison) still sees the original.
+ */
+export declare function sanitizeParsedJson(value: unknown): unknown;
+/**
+ * `JSON.parse` + `sanitizeParsedJson` in one call. Use at any
+ * untrusted-JSON ingest site (agent step output, plugin manifest,
+ * automation policy from disk, connector tokens after store-fetch).
+ */
+export declare function parseJsonSanitized(raw: string): unknown;

package/dist/sanitizeParsedJson.js

@@ -0,0 +1,55 @@
+/**
+ * Recursively strip prototype-pollution keys from a `JSON.parse` result
+ * before it lands in a shared map / merge target / runtime context.
+ *
+ * Why this is needed even though `JSON.parse` doesn't mutate
+ * `Object.prototype`:
+ *   V8 uses `Object.defineProperty(obj, "__proto__", { value, ... })` for
+ *   `JSON.parse('{"__proto__": {...}}')`, so the prototype chain itself
+ *   is unaffected at parse time. But the *own property* survives — and
+ *   any downstream `Object.assign(target, parsed)`, deep-merge, spread,
+ *   or `for...in` traversal that writes via bracket assignment will
+ *   re-introduce the pollution.
+ *
+ * The conservative move at every untrusted-JSON ingest boundary is to
+ * walk the parse result and drop the three dangerous keys
+ * (`__proto__`, `constructor`, `prototype`) recursively.
+ *
+ * See PR #568 + `feedback_record_string_prototype_walk.md` for the
+ * underlying class of bugs. Originally local to
+ * `src/recipes/yamlRunner.ts`; this module is the shared home.
+ */
+const DANGEROUS_KEYS = new Set(["__proto__", "constructor", "prototype"]);
+/**
+ * Strip `__proto__` / `constructor` / `prototype` own-property keys
+ * recursively from `value`. Returns a plain JSON-safe shape (objects
+ * become `Record<string, unknown>` with the dangerous keys absent;
+ * arrays mapped element-wise; primitives returned as-is).
+ *
+ * This is a clone, not an in-place mutation. The original parse result
+ * is left untouched, so callers can apply this lazily and the eager
+ * shape (e.g. when the parse result is also used for fast-path
+ * comparison) still sees the original.
+ */
+export function sanitizeParsedJson(value) {
+    if (Array.isArray(value))
+        return value.map(sanitizeParsedJson);
+    if (value === null || typeof value !== "object")
+        return value;
+    const out = {};
+    for (const key of Object.keys(value)) {
+        if (DANGEROUS_KEYS.has(key))
+            continue;
+        out[key] = sanitizeParsedJson(value[key]);
+    }
+    return out;
+}
+/**
+ * `JSON.parse` + `sanitizeParsedJson` in one call. Use at any
+ * untrusted-JSON ingest site (agent step output, plugin manifest,
+ * automation policy from disk, connector tokens after store-fetch).
+ */
+export function parseJsonSanitized(raw) {
+    return sanitizeParsedJson(JSON.parse(raw));
+}
+//# sourceMappingURL=sanitizeParsedJson.js.map

package/dist/sanitizeParsedJson.js.map

@@ -0,0 +1 @@
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