paperlint 3.1.3 → 4.0.0

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Files changed (527) hide show
  1. package/.github/workflows/ci.yml +12 -7
  2. package/CLAUDE.md +5 -5
  3. package/CONTRIBUTING.md +34 -5
  4. package/dist/adapters/banal/failure.d.ts +1 -7
  5. package/dist/adapters/banal/failure.d.ts.map +1 -1
  6. package/dist/adapters/banal/failure.js +5 -7
  7. package/dist/adapters/banal/failure.js.map +1 -1
  8. package/dist/adapters/banal/index.d.ts.map +1 -1
  9. package/dist/adapters/banal/index.js +4 -3
  10. package/dist/adapters/banal/index.js.map +1 -1
  11. package/dist/adapters/banal/install.d.ts.map +1 -1
  12. package/dist/adapters/banal/install.js +4 -3
  13. package/dist/adapters/banal/install.js.map +1 -1
  14. package/dist/adapters/banal/invocation.d.ts +10 -5
  15. package/dist/adapters/banal/invocation.d.ts.map +1 -1
  16. package/dist/adapters/banal/invocation.js +13 -1
  17. package/dist/adapters/banal/invocation.js.map +1 -1
  18. package/dist/adapters/banal/locate.d.ts +12 -9
  19. package/dist/adapters/banal/locate.d.ts.map +1 -1
  20. package/dist/adapters/banal/locate.js +19 -12
  21. package/dist/adapters/banal/locate.js.map +1 -1
  22. package/dist/adapters/banal/run.d.ts +10 -1
  23. package/dist/adapters/banal/run.d.ts.map +1 -1
  24. package/dist/adapters/banal/run.js +8 -4
  25. package/dist/adapters/banal/run.js.map +1 -1
  26. package/dist/adapters/banal/settings.d.ts +1 -1
  27. package/dist/adapters/banal/settings.d.ts.map +1 -1
  28. package/dist/adapters/banal/settings.js +2 -1
  29. package/dist/adapters/banal/settings.js.map +1 -1
  30. package/dist/adapters/memory/index.d.ts.map +1 -1
  31. package/dist/adapters/memory/index.js +8 -2
  32. package/dist/adapters/memory/index.js.map +1 -1
  33. package/dist/adapters/node/files.io.d.ts.map +1 -1
  34. package/dist/adapters/node/files.io.js +2 -1
  35. package/dist/adapters/node/files.io.js.map +1 -1
  36. package/dist/adapters/node/process.io.d.ts +5 -7
  37. package/dist/adapters/node/process.io.d.ts.map +1 -1
  38. package/dist/adapters/node/process.io.js +4 -3
  39. package/dist/adapters/node/process.io.js.map +1 -1
  40. package/dist/adapters/node/workspace.io.d.ts.map +1 -1
  41. package/dist/adapters/node/workspace.io.js +4 -2
  42. package/dist/adapters/node/workspace.io.js.map +1 -1
  43. package/dist/adapters/pdfjs/fill.d.ts.map +1 -1
  44. package/dist/adapters/pdfjs/fill.js +13 -7
  45. package/dist/adapters/pdfjs/fill.js.map +1 -1
  46. package/dist/adapters/references/index.d.ts.map +1 -1
  47. package/dist/adapters/references/index.js +8 -7
  48. package/dist/adapters/references/index.js.map +1 -1
  49. package/dist/adapters/references/pool.d.ts.map +1 -1
  50. package/dist/adapters/references/pool.js +4 -5
  51. package/dist/adapters/references/pool.js.map +1 -1
  52. package/dist/adapters/references/reach.io.d.ts.map +1 -1
  53. package/dist/adapters/references/reach.io.js +2 -1
  54. package/dist/adapters/references/reach.io.js.map +1 -1
  55. package/dist/build-engine.d.ts +1 -1
  56. package/dist/build-engine.d.ts.map +1 -1
  57. package/dist/build-engine.js +10 -3
  58. package/dist/build-engine.js.map +1 -1
  59. package/dist/build.d.ts +2 -3
  60. package/dist/build.d.ts.map +1 -1
  61. package/dist/build.js +19 -17
  62. package/dist/build.js.map +1 -1
  63. package/dist/caller-path.d.ts +3 -0
  64. package/dist/caller-path.d.ts.map +1 -0
  65. package/dist/caller-path.js +13 -0
  66. package/dist/caller-path.js.map +1 -0
  67. package/dist/cli.d.ts +10 -17
  68. package/dist/cli.d.ts.map +1 -1
  69. package/dist/cli.js +93 -46
  70. package/dist/cli.js.map +1 -1
  71. package/dist/doctor.d.ts +12 -3
  72. package/dist/doctor.d.ts.map +1 -1
  73. package/dist/doctor.js +5 -3
  74. package/dist/doctor.js.map +1 -1
  75. package/dist/domain/lookup-cache.d.ts.map +1 -1
  76. package/dist/domain/lookup-cache.js +10 -8
  77. package/dist/domain/lookup-cache.js.map +1 -1
  78. package/dist/domain/paths.d.ts +8 -2
  79. package/dist/domain/paths.d.ts.map +1 -1
  80. package/dist/domain/paths.js +12 -1
  81. package/dist/domain/paths.js.map +1 -1
  82. package/dist/domain/ready.d.ts +24 -0
  83. package/dist/domain/ready.d.ts.map +1 -0
  84. package/dist/domain/ready.js +11 -0
  85. package/dist/domain/ready.js.map +1 -0
  86. package/dist/domain/record.d.ts +8 -0
  87. package/dist/domain/record.d.ts.map +1 -0
  88. package/dist/domain/record.js +8 -0
  89. package/dist/domain/record.js.map +1 -0
  90. package/dist/domain/sha256.d.ts.map +1 -1
  91. package/dist/domain/sha256.js +4 -2
  92. package/dist/domain/sha256.js.map +1 -1
  93. package/dist/domain/text.d.ts +12 -0
  94. package/dist/domain/text.d.ts.map +1 -1
  95. package/dist/domain/text.js +17 -0
  96. package/dist/domain/text.js.map +1 -1
  97. package/dist/engine.d.ts +23 -22
  98. package/dist/engine.d.ts.map +1 -1
  99. package/dist/engine.js +4 -3
  100. package/dist/engine.js.map +1 -1
  101. package/dist/eslint-rules/bib-reachable-entry.d.ts +22 -0
  102. package/dist/eslint-rules/bib-reachable-entry.d.ts.map +1 -0
  103. package/dist/eslint-rules/bib-reachable-entry.js +75 -0
  104. package/dist/eslint-rules/bib-reachable-entry.js.map +1 -0
  105. package/dist/eslint-rules/install-path-literals.d.ts +80 -0
  106. package/dist/eslint-rules/install-path-literals.d.ts.map +1 -0
  107. package/dist/eslint-rules/install-path-literals.js +105 -0
  108. package/dist/eslint-rules/install-path-literals.js.map +1 -0
  109. package/dist/eslint-rules/latex-language.d.ts +136 -0
  110. package/dist/eslint-rules/latex-language.d.ts.map +1 -0
  111. package/dist/eslint-rules/latex-language.js +639 -0
  112. package/dist/eslint-rules/latex-language.js.map +1 -0
  113. package/dist/eslint-rules/paper-research-question.d.ts +31 -0
  114. package/dist/eslint-rules/paper-research-question.d.ts.map +1 -0
  115. package/dist/eslint-rules/paper-research-question.js +188 -0
  116. package/dist/eslint-rules/paper-research-question.js.map +1 -0
  117. package/dist/eslint-rules/paper-stages.d.ts +83 -0
  118. package/dist/eslint-rules/paper-stages.d.ts.map +1 -0
  119. package/dist/eslint-rules/paper-stages.js +358 -0
  120. package/dist/eslint-rules/paper-stages.js.map +1 -0
  121. package/dist/eslint-rules/paper-typography.d.ts +74 -0
  122. package/dist/eslint-rules/paper-typography.d.ts.map +1 -0
  123. package/dist/eslint-rules/paper-typography.js +404 -0
  124. package/dist/eslint-rules/paper-typography.js.map +1 -0
  125. package/dist/eslint-rules/papers.d.ts +42 -0
  126. package/dist/eslint-rules/papers.d.ts.map +1 -0
  127. package/dist/eslint-rules/papers.js +145 -0
  128. package/dist/eslint-rules/papers.js.map +1 -0
  129. package/dist/eslint-rules/pdf-last-page-balance.d.ts +72 -0
  130. package/dist/eslint-rules/pdf-last-page-balance.d.ts.map +1 -0
  131. package/dist/eslint-rules/pdf-last-page-balance.js +237 -0
  132. package/dist/eslint-rules/pdf-last-page-balance.js.map +1 -0
  133. package/dist/eslint-rules/review-frontmatter.d.ts +57 -0
  134. package/dist/eslint-rules/review-frontmatter.d.ts.map +1 -0
  135. package/dist/eslint-rules/review-frontmatter.js +126 -0
  136. package/dist/eslint-rules/review-frontmatter.js.map +1 -0
  137. package/dist/eslint-rules/review-frontmatter.schema.json +36 -0
  138. package/dist/eslint-rules/rule-context.d.ts +55 -0
  139. package/dist/eslint-rules/rule-context.d.ts.map +1 -0
  140. package/dist/eslint-rules/rule-context.js +9 -0
  141. package/dist/eslint-rules/rule-context.js.map +1 -0
  142. package/dist/eslint-rules/sibling-frontmatter.d.ts +25 -0
  143. package/dist/eslint-rules/sibling-frontmatter.d.ts.map +1 -0
  144. package/dist/eslint-rules/sibling-frontmatter.js +16 -0
  145. package/dist/eslint-rules/sibling-frontmatter.js.map +1 -0
  146. package/dist/eslint-rules/sibling-frontmatter.schema.json +14 -0
  147. package/dist/eslint-rules/temp-root-realpath.d.ts +71 -0
  148. package/dist/eslint-rules/temp-root-realpath.d.ts.map +1 -0
  149. package/dist/eslint-rules/temp-root-realpath.js +139 -0
  150. package/dist/eslint-rules/temp-root-realpath.js.map +1 -0
  151. package/dist/eslint-rules/tex-build.d.ts +35 -0
  152. package/dist/eslint-rules/tex-build.d.ts.map +1 -0
  153. package/dist/eslint-rules/tex-build.js +313 -0
  154. package/dist/eslint-rules/tex-build.js.map +1 -0
  155. package/dist/facts-file.d.ts.map +1 -1
  156. package/dist/facts-file.js +31 -27
  157. package/dist/facts-file.js.map +1 -1
  158. package/dist/hooks-settings.d.ts +1 -1
  159. package/dist/hooks-settings.d.ts.map +1 -1
  160. package/dist/hooks-settings.js +31 -11
  161. package/dist/hooks-settings.js.map +1 -1
  162. package/dist/init.d.ts +8 -9
  163. package/dist/init.d.ts.map +1 -1
  164. package/dist/init.js +33 -15
  165. package/dist/init.js.map +1 -1
  166. package/dist/latex-loop.d.ts +2 -2
  167. package/dist/latex-loop.d.ts.map +1 -1
  168. package/dist/latex-loop.js +2 -2
  169. package/dist/latex-loop.js.map +1 -1
  170. package/dist/lib/agent-cli-version.d.ts +65 -0
  171. package/dist/lib/agent-cli-version.d.ts.map +1 -0
  172. package/dist/lib/agent-cli-version.js +77 -0
  173. package/dist/lib/agent-cli-version.js.map +1 -0
  174. package/dist/lib/check.d.ts +19 -0
  175. package/dist/lib/check.d.ts.map +1 -0
  176. package/dist/lib/check.js +52 -0
  177. package/dist/lib/check.js.map +1 -0
  178. package/dist/lib/markdown.d.ts +180 -0
  179. package/dist/lib/markdown.d.ts.map +1 -0
  180. package/dist/lib/markdown.js +302 -0
  181. package/dist/lib/markdown.js.map +1 -0
  182. package/dist/lib/paper-config.d.ts +84 -0
  183. package/dist/lib/paper-config.d.ts.map +1 -0
  184. package/dist/lib/paper-config.js +138 -0
  185. package/dist/lib/paper-config.js.map +1 -0
  186. package/dist/lib/skill-eval-fixture.d.ts +29 -0
  187. package/dist/lib/skill-eval-fixture.d.ts.map +1 -0
  188. package/dist/lib/skill-eval-fixture.js +62 -0
  189. package/dist/lib/skill-eval-fixture.js.map +1 -0
  190. package/dist/link-skills.d.ts.map +1 -1
  191. package/dist/link-skills.js +5 -4
  192. package/dist/link-skills.js.map +1 -1
  193. package/dist/new-paper.d.ts.map +1 -1
  194. package/dist/new-paper.js +7 -3
  195. package/dist/new-paper.js.map +1 -1
  196. package/dist/paper-files.d.ts +4 -4
  197. package/dist/paper-files.d.ts.map +1 -1
  198. package/dist/paper-files.js +6 -6
  199. package/dist/paper-files.js.map +1 -1
  200. package/dist/paper-settings.d.ts.map +1 -1
  201. package/dist/paper-settings.js +8 -7
  202. package/dist/paper-settings.js.map +1 -1
  203. package/dist/pdf-facts.d.ts +51 -1
  204. package/dist/pdf-facts.d.ts.map +1 -1
  205. package/dist/pdf-facts.js +25 -16
  206. package/dist/pdf-facts.js.map +1 -1
  207. package/dist/pdf-geometry.d.ts.map +1 -1
  208. package/dist/pdf-geometry.js +3 -4
  209. package/dist/pdf-geometry.js.map +1 -1
  210. package/dist/ports/tool-installer.d.ts +2 -14
  211. package/dist/ports/tool-installer.d.ts.map +1 -1
  212. package/dist/presets.d.ts.map +1 -1
  213. package/dist/presets.js +19 -6
  214. package/dist/presets.js.map +1 -1
  215. package/dist/references.d.ts.map +1 -1
  216. package/dist/references.js +15 -10
  217. package/dist/references.js.map +1 -1
  218. package/dist/rules-config.d.ts +26 -1
  219. package/dist/rules-config.d.ts.map +1 -1
  220. package/dist/rules-config.js +15 -12
  221. package/dist/rules-config.js.map +1 -1
  222. package/dist/structure.js +1 -1
  223. package/dist/structure.js.map +1 -1
  224. package/dist/tex-requirements.d.ts +4 -0
  225. package/dist/tex-requirements.d.ts.map +1 -1
  226. package/dist/tex-requirements.js +22 -5
  227. package/dist/tex-requirements.js.map +1 -1
  228. package/dist/toolchain.d.ts.map +1 -1
  229. package/dist/toolchain.js +21 -16
  230. package/dist/toolchain.js.map +1 -1
  231. package/dist/types.d.ts +5 -3
  232. package/dist/types.d.ts.map +1 -1
  233. package/dist/venue-rules.d.ts.map +1 -1
  234. package/dist/venue-rules.js +21 -8
  235. package/dist/venue-rules.js.map +1 -1
  236. package/docs/configuration.md +2 -2
  237. package/docs/e2e.md +7 -7
  238. package/docs/install.md +1 -1
  239. package/docs/prior-art/README.md +1 -1
  240. package/docs/prior-art/package-location.md +5 -5
  241. package/docs/prior-art/repro/README.md +1 -1
  242. package/docs/prior-art/test-tooling.md +2 -2
  243. package/docs/testing.md +11 -8
  244. package/docs/toolchain.md +1 -1
  245. package/eslint-rules/{bib-reachable-entry.mjs → bib-reachable-entry.ts} +5 -4
  246. package/eslint-rules/install-path-literals.harness.mjs +1 -1
  247. package/eslint-rules/{install-path-literals.mjs → install-path-literals.ts} +18 -10
  248. package/eslint-rules/latex-language.harness.mjs +2 -2
  249. package/eslint-rules/latex-language.test.mjs +7 -1
  250. package/eslint-rules/{latex-language.mjs → latex-language.ts} +297 -109
  251. package/eslint-rules/paper-research-question.harness.mjs +3 -3
  252. package/eslint-rules/{paper-research-question.mjs → paper-research-question.ts} +35 -16
  253. package/eslint-rules/paper-stages.harness.mjs +2 -2
  254. package/eslint-rules/paper-stages.test.mjs +8 -2
  255. package/eslint-rules/{paper-stages.mjs → paper-stages.ts} +76 -31
  256. package/eslint-rules/paper-typography.test.mjs +3 -3
  257. package/eslint-rules/{paper-typography.mjs → paper-typography.ts} +134 -56
  258. package/eslint-rules/papers.harness.mjs +2 -2
  259. package/eslint-rules/{papers.mjs → papers.ts} +7 -4
  260. package/eslint-rules/pdf-last-page-balance.harness.mjs +3 -3
  261. package/eslint-rules/{pdf-last-page-balance.mjs → pdf-last-page-balance.ts} +89 -32
  262. package/eslint-rules/review-frontmatter.test.mjs +2 -2
  263. package/eslint-rules/{review-frontmatter.mjs → review-frontmatter.ts} +38 -16
  264. package/eslint-rules/rule-context.ts +62 -0
  265. package/eslint-rules/{sibling-frontmatter.mjs → sibling-frontmatter.ts} +1 -1
  266. package/eslint-rules/temp-root-realpath.harness.mjs +1 -1
  267. package/eslint-rules/{temp-root-realpath.mjs → temp-root-realpath.ts} +20 -7
  268. package/eslint-rules/tex-build.harness.mjs +2 -2
  269. package/eslint-rules/{tex-build.mjs → tex-build.ts} +6 -5
  270. package/eslint.config.mjs +146 -30
  271. package/fixtures/install-path-literals/clean.fixture.mjs +1 -1
  272. package/fixtures/install-path-literals/clean.md +2 -2
  273. package/fixtures/install-path-literals/defect.fixture.mjs +1 -1
  274. package/fixtures/install-path-literals/defect.md +2 -2
  275. package/fixtures/pdf-facts/README.md +2 -2
  276. package/fixtures/real-markdown-paper/{baseline.mjs → baseline.ts} +31 -10
  277. package/hooks/{hooks.harness.mjs → hooks.harness.ts} +51 -34
  278. package/hooks/paper-edit-guard.hook.mjs +1 -1
  279. package/hooks/{paper-edit-guard.test.mjs → paper-edit-guard.test.ts} +3 -7
  280. package/hooks/paper-skills-nudge.hook.mjs +1 -1
  281. package/hooks/{paper-skills-nudge.test.mjs → paper-skills-nudge.test.ts} +2 -6
  282. package/hooks/paper-status-gates.sh +9 -19
  283. package/hooks/{paper-status-gates.test.mjs → paper-status-gates.test.ts} +2 -6
  284. package/lib/agent-cli-version.harness.mjs +1 -1
  285. package/lib/{agent-cli-version.mjs → agent-cli-version.ts} +32 -18
  286. package/lib/check.test.ts +14 -9
  287. package/lib/{check.mjs → check.ts} +22 -9
  288. package/lib/markdown.test.mjs +7 -7
  289. package/lib/{markdown.mjs → markdown.ts} +68 -29
  290. package/lib/paper-config.harness.mjs +9 -9
  291. package/lib/{paper-config.mjs → paper-config.ts} +20 -19
  292. package/lib/skill-checks.mjs +24 -381
  293. package/lib/skill-checks.test.mjs +64 -116
  294. package/lib/skill-corpus.mjs +10 -251
  295. package/lib/skill-corpus.test.mjs +2 -13
  296. package/lib/skill-eval-kit.mjs +1 -1
  297. package/lib/skill-trigger-cases.mjs +1 -1
  298. package/package.json +42 -10
  299. package/scripts/{check.harness.mjs → check.harness.ts} +111 -10
  300. package/scripts/{check.test.mjs → check.test.ts} +13 -10
  301. package/scripts/{check.mjs → check.ts} +116 -42
  302. package/scripts/coverage-config.test.ts +80 -38
  303. package/scripts/eslint-report-guard.test.mjs +1 -1
  304. package/scripts/harness-api.frozen.json +14 -16
  305. package/scripts/harness-api.test.ts +8 -5
  306. package/scripts/layer-legacy-frozen.test.ts +17 -13
  307. package/scripts/{layer-legacy-frozen.mjs → layer-legacy-frozen.ts} +128 -39
  308. package/scripts/release-config.test.ts +12 -4
  309. package/scripts/rules-see-files.test.mjs +1 -1
  310. package/scripts/test.test.ts +78 -0
  311. package/scripts/test.ts +87 -0
  312. package/skills/analyze-sibling-paper/SKILL.md +1 -39
  313. package/skills/analyze-sibling-paper/SKILL.md.spec.ts +0 -38
  314. package/skills/argument-arc/SKILL.md +2 -36
  315. package/skills/argument-arc/SKILL.md.spec.ts +1 -43
  316. package/skills/build-benchmark/SKILL.md +1 -41
  317. package/skills/build-benchmark/SKILL.md.spec.ts +0 -40
  318. package/skills/camera-ready/SKILL.md +1 -34
  319. package/skills/camera-ready/SKILL.md.spec.ts +0 -33
  320. package/skills/cold-read-diff/SKILL.md +1 -35
  321. package/skills/cold-read-diff/SKILL.md.spec.ts +0 -34
  322. package/skills/draft-paper/SKILL.md +2 -41
  323. package/skills/draft-paper/SKILL.md.spec.ts +1 -50
  324. package/skills/extend-paper/SKILL.md +2 -33
  325. package/skills/extend-paper/SKILL.md.spec.ts +1 -42
  326. package/skills/find-venue/SKILL.md +2 -38
  327. package/skills/find-venue/SKILL.md.spec.ts +1 -47
  328. package/skills/grade-paper-writing/SKILL.md +3 -38
  329. package/skills/grade-paper-writing/SKILL.md.spec.ts +2 -47
  330. package/skills/grade-paper-writing/prose-lint.mjs +3 -4
  331. package/skills/grade-paper-writing/{prose-lint.test.mjs → prose-lint.test.ts} +3 -3
  332. package/skills/harden-paper/SKILL.md +1 -39
  333. package/skills/harden-paper/SKILL.md.spec.ts +0 -38
  334. package/skills/map-prior-work/SKILL.md +1 -35
  335. package/skills/map-prior-work/SKILL.md.spec.ts +0 -34
  336. package/skills/osf-artifact-upload/{osf-artifact-upload.harness.mjs → osf-artifact-upload.harness.ts} +3 -4
  337. package/skills/paper-adversarial-review/SKILL.md +2 -35
  338. package/skills/paper-adversarial-review/SKILL.md.spec.ts +1 -43
  339. package/skills/paper-pipeline/SKILL.md +2 -28
  340. package/skills/paper-pipeline/SKILL.md.spec.ts +1 -27
  341. package/skills/paper-pipeline/description-language.eval.mjs +1 -1
  342. package/skills/paper-pipeline/framing-vs-vocabulary.eval.mjs +1 -1
  343. package/skills/paper-pipeline/grade-paper-writing-ablation.eval.mjs +2 -2
  344. package/skills/paper-pipeline/paper-pipeline.harness.mjs +25 -40
  345. package/skills/paper-pipeline/pipeline-firing.eval.mjs +1 -1
  346. package/skills/paper-pipeline/pipeline-language.eval.mjs +1 -1
  347. package/skills/paper-pipeline/references/acceptance-gate.md +1 -6
  348. package/skills/paper-pipeline/references/pipeline-status-template.md +8 -35
  349. package/skills/paper-pipeline/scripts/README.md +30 -225
  350. package/skills/paper-pipeline/scripts/artifact-coverage.harness.mjs +4 -8
  351. package/skills/paper-pipeline/scripts/artifact-coverage.mjs +1 -1
  352. package/skills/paper-pipeline/scripts/{artifact-coverage.test.mjs → artifact-coverage.test.ts} +2 -2
  353. package/skills/paper-pipeline/scripts/consumer.harness.mjs +6 -104
  354. package/skills/paper-pipeline/scripts/consumer.mjs +24 -109
  355. package/skills/paper-pipeline/scripts/consumer.test.mjs +1 -1
  356. package/skills/paper-pipeline/scripts/extract-ref-facts.harness.mjs +1 -1
  357. package/skills/paper-pipeline/scripts/extract-ref-facts.mjs +1 -4
  358. package/skills/paper-pipeline/scripts/extract-ref-facts.test.mjs +1 -1
  359. package/skills/paper-pipeline/scripts/generated-code.harness.mjs +2 -3
  360. package/skills/paper-pipeline/scripts/{generated-code.test.mjs → generated-code.test.ts} +3 -3
  361. package/skills/paper-pipeline/scripts/population-map.harness.mjs +3 -3
  362. package/skills/paper-pipeline/scripts/population-map.mjs +1 -4
  363. package/skills/paper-pipeline/scripts/population-map.test.mjs +1 -1
  364. package/skills/paper-pipeline/scripts/{round-diff.harness.mjs → round-diff.harness.ts} +45 -18
  365. package/skills/paper-pipeline/scripts/round-diff.mjs +1 -1
  366. package/skills/paper-pipeline/scripts/round-diff.test.mjs +1 -1
  367. package/skills/paper-status/SKILL.md +2 -42
  368. package/skills/paper-status/SKILL.md.spec.ts +1 -41
  369. package/skills/pc-panel-review/SKILL.md +2 -46
  370. package/skills/pc-panel-review/SKILL.md.spec.ts +1 -45
  371. package/skills/plan-paper-timeline/SKILL.md +2 -36
  372. package/skills/plan-paper-timeline/SKILL.md.spec.ts +0 -36
  373. package/skills/plan-paper-timeline/fixtures/{fake-google-calendar.mjs → fake-google-calendar.ts} +101 -70
  374. package/skills/plan-paper-timeline/plan-paper-timeline.effects.harness.mjs +3 -3
  375. package/skills/render-paper/SKILL.md +1 -37
  376. package/skills/render-paper/SKILL.md.spec.ts +0 -36
  377. package/skills/render-paper/{extract-pdf-facts.harness.mjs → extract-pdf-facts.harness.ts} +34 -9
  378. package/skills/render-paper/render-paper.harness.mjs +2 -2
  379. package/skills/research-ideate/SKILL.md +2 -39
  380. package/skills/research-ideate/SKILL.md.spec.ts +1 -47
  381. package/skills/study-accepted-papers/SKILL.md +1 -34
  382. package/skills/study-accepted-papers/SKILL.md.spec.ts +0 -33
  383. package/skills/submit-paper/SKILL.md +1 -33
  384. package/skills/submit-paper/SKILL.md.spec.ts +0 -32
  385. package/skills/sweep-design-space/SKILL.md +1 -38
  386. package/skills/sweep-design-space/SKILL.md.spec.ts +0 -37
  387. package/skills/tighten-paper/SKILL.md +2 -39
  388. package/skills/tighten-paper/SKILL.md.spec.ts +1 -47
  389. package/skills/tighten-paper/structure.mjs +5 -12
  390. package/skills/tighten-paper/{structure.test.mjs → structure.test.ts} +4 -3
  391. package/skills/verify-citations/SKILL.md +2 -38
  392. package/skills/verify-citations/SKILL.md.spec.ts +1 -37
  393. package/skills/verify-citations/scripts/{bib-authors.cli.test.mjs → bib-authors.cli.test.ts} +14 -4
  394. package/skills/verify-citations/scripts/bib-authors.d.mts +63 -0
  395. package/skills/verify-citations/scripts/bib-authors.mjs +1 -4
  396. package/skills/verify-citations/scripts/{verify-cites.cli.test.mjs → verify-cites.cli.test.ts} +32 -9
  397. package/skills/verify-citations/scripts/verify-cites.d.mts +58 -0
  398. package/src/CLAUDE.md +1 -1
  399. package/src/adapters/banal/failure.ts +9 -10
  400. package/src/adapters/banal/index.test.ts +5 -8
  401. package/src/adapters/banal/index.ts +8 -7
  402. package/src/adapters/banal/install.ts +9 -4
  403. package/src/adapters/banal/invocation.test.ts +23 -9
  404. package/src/adapters/banal/invocation.ts +24 -9
  405. package/src/adapters/banal/locate.test.ts +2 -2
  406. package/src/adapters/banal/locate.ts +27 -21
  407. package/src/adapters/banal/output.test.ts +1 -1
  408. package/src/adapters/banal/run.test.ts +5 -5
  409. package/src/adapters/banal/run.ts +16 -10
  410. package/src/adapters/banal/settings.ts +2 -2
  411. package/src/adapters/banal/xml.test.ts +1 -1
  412. package/src/adapters/curl/download.test.ts +8 -6
  413. package/src/adapters/memory/index.ts +4 -3
  414. package/src/adapters/node/files.io.ts +2 -2
  415. package/src/adapters/node/files.test.ts +8 -4
  416. package/src/adapters/node/process.io.ts +13 -5
  417. package/src/adapters/node/process.test.ts +5 -5
  418. package/src/adapters/node/workspace.io.ts +9 -4
  419. package/src/adapters/node/workspace.test.ts +3 -1
  420. package/src/adapters/pdfjs/fill.test.ts +2 -2
  421. package/src/adapters/pdfjs/fill.ts +14 -7
  422. package/src/adapters/references/index.test.ts +31 -38
  423. package/src/adapters/references/index.ts +33 -60
  424. package/src/adapters/references/pool.ts +3 -5
  425. package/src/adapters/references/reach.io.ts +2 -1
  426. package/src/build-engine.harness.mjs +1 -1
  427. package/src/build-engine.test.ts +13 -8
  428. package/src/build-engine.ts +12 -7
  429. package/src/build.harness.mjs +2 -2
  430. package/src/build.test.ts +24 -24
  431. package/src/build.ts +34 -26
  432. package/src/caller-path.ts +13 -0
  433. package/src/cli.harness.mjs +6 -8
  434. package/src/cli.test.ts +31 -13
  435. package/src/cli.ts +117 -58
  436. package/src/doctor.harness.mjs +3 -3
  437. package/src/doctor.test.ts +1 -1
  438. package/src/doctor.ts +17 -7
  439. package/src/domain/lookup-cache.ts +21 -11
  440. package/src/domain/paths.test.ts +15 -0
  441. package/src/domain/paths.ts +20 -1
  442. package/src/domain/ready.ts +31 -0
  443. package/src/domain/record.test.ts +20 -0
  444. package/src/domain/record.ts +12 -0
  445. package/src/domain/result.test.ts +2 -2
  446. package/src/domain/sha256.ts +5 -3
  447. package/src/domain/text.test.ts +32 -0
  448. package/src/domain/text.ts +23 -0
  449. package/src/engine.harness.mjs +2 -2
  450. package/src/engine.ts +34 -5
  451. package/src/facts-file.test.ts +9 -7
  452. package/src/facts-file.ts +45 -29
  453. package/src/{hooks-settings.harness.mjs → hooks-settings.harness.ts} +56 -20
  454. package/src/hooks-settings.ts +48 -13
  455. package/src/init.test.ts +37 -14
  456. package/src/init.ts +48 -24
  457. package/src/{latex-log.harness.mjs → latex-log.harness.ts} +14 -14
  458. package/src/{latex-loop.harness.mjs → latex-loop.harness.ts} +64 -36
  459. package/src/latex-loop.ts +3 -3
  460. package/src/{link-skills.harness.mjs → link-skills.harness.ts} +19 -19
  461. package/src/link-skills.test.ts +3 -3
  462. package/src/link-skills.ts +5 -4
  463. package/src/lint-fix.test.ts +4 -6
  464. package/src/linted-set.test.ts +2 -2
  465. package/src/new-paper.harness.mjs +9 -25
  466. package/src/new-paper.test.ts +8 -10
  467. package/src/new-paper.ts +9 -5
  468. package/src/paper-files.test.ts +25 -24
  469. package/src/paper-files.ts +16 -27
  470. package/src/paper-settings-commands.test.ts +5 -4
  471. package/src/paper-settings.test.ts +7 -7
  472. package/src/paper-settings.ts +13 -14
  473. package/src/{pdf-facts.harness.mjs → pdf-facts.harness.ts} +9 -8
  474. package/src/pdf-facts.test.ts +25 -15
  475. package/src/pdf-facts.ts +81 -23
  476. package/src/{pdf-geometry.harness.mjs → pdf-geometry.harness.ts} +19 -12
  477. package/src/pdf-geometry.ts +8 -4
  478. package/src/ports/tool-installer.ts +2 -17
  479. package/src/presets.ts +31 -16
  480. package/src/references.test.ts +76 -62
  481. package/src/references.ts +18 -12
  482. package/src/{rules-config.harness.mjs → rules-config.harness.ts} +7 -13
  483. package/src/rules-config.ts +46 -14
  484. package/src/rules-off.test.ts +6 -4
  485. package/src/{structure.harness.mjs → structure.harness.ts} +26 -15
  486. package/src/structure.ts +1 -1
  487. package/src/{tex-requirements.harness.mjs → tex-requirements.harness.ts} +50 -22
  488. package/src/tex-requirements.test.ts +21 -0
  489. package/src/tex-requirements.ts +37 -11
  490. package/src/toolchain.harness.mjs +2 -2
  491. package/src/toolchain.test.ts +10 -6
  492. package/src/toolchain.ts +31 -17
  493. package/src/types.ts +5 -3
  494. package/src/venue-rules.test.ts +70 -68
  495. package/src/venue-rules.ts +22 -12
  496. package/tsconfig.json +6 -3
  497. package/tsconfig.pkg.json +10 -0
  498. package/lib/check.d.mts +0 -17
  499. package/lib/paper-config.d.mts +0 -31
  500. package/scripts/layer-legacy-frozen.d.mts +0 -36
  501. package/scripts/rules-are-content-only.harness.mjs +0 -105
  502. package/scripts/rules-are-content-only.mjs +0 -148
  503. package/scripts/rules-are-content-only.test.mjs +0 -61
  504. package/scripts/test.mjs +0 -44
  505. package/scripts/test.test.mjs +0 -52
  506. package/skills/paper-pipeline/scripts/announce.mjs +0 -67
  507. package/skills/paper-pipeline/scripts/announce.test.mjs +0 -102
  508. package/skills/paper-pipeline/scripts/fixtures/clean/PIPELINE-STATUS.md +0 -51
  509. package/skills/paper-pipeline/scripts/fixtures/dirty/PIPELINE-STATUS.md +0 -52
  510. package/skills/paper-pipeline/scripts/fixtures/dirty/paper.md +0 -6
  511. package/skills/paper-pipeline/scripts/fixtures/scorecard.mjs +0 -71
  512. package/skills/paper-pipeline/scripts/ledger.cli.test.mjs +0 -302
  513. package/skills/paper-pipeline/scripts/ledger.mjs +0 -623
  514. package/skills/paper-pipeline/scripts/ledger.test.mjs +0 -254
  515. package/skills/paper-pipeline/scripts/pipeline-check.cli.test.mjs +0 -474
  516. package/skills/paper-pipeline/scripts/pipeline-check.harness.mjs +0 -328
  517. package/skills/paper-pipeline/scripts/pipeline-check.mjs +0 -753
  518. package/skills/paper-pipeline/scripts/pipeline-edges.mjs +0 -169
  519. package/skills/paper-pipeline/scripts/pipeline-edges.test.mjs +0 -73
  520. package/skills/paper-pipeline/scripts/run-mechanical.mjs +0 -648
  521. package/skills/paper-pipeline/scripts/run-mechanical.test.mjs +0 -468
  522. package/skills/paper-pipeline/scripts/status.mjs +0 -295
  523. package/skills/paper-pipeline/scripts/status.test.mjs +0 -232
  524. /package/bin/{paperlint.test.mjs → paperlint.test.ts} +0 -0
  525. /package/lib/{skill-eval-fixture.mjs → skill-eval-fixture.ts} +0 -0
  526. /package/skills/grade-paper-writing/__snapshots__/{prose-lint.test.mjs.snap → prose-lint.test.ts.snap} +0 -0
  527. /package/skills/tighten-paper/__snapshots__/{structure.test.mjs.snap → structure.test.ts.snap} +0 -0
@@ -1,254 +0,0 @@
1
- /**
2
- * The ledger says NO when it should and YES when it should — both directions, for every property
3
- * the design claims (formerly `ledger.selftest.mjs`, which nothing ran).
4
- *
5
- * Everything lives under one temp directory: the ledger file (PIPELINE_LEDGER) and a consumer root
6
- * (CLAUDE_PROJECT_DIR) holding a copy of the one skill whose hash is watched. Both are set BEFORE
7
- * `ledger.mjs` is imported, because it resolves them at import time.
8
- */
9
- import assert from "node:assert/strict";
10
- import {
11
- appendFileSync,
12
- cpSync,
13
- mkdirSync,
14
- mkdtempSync,
15
- readFileSync,
16
- realpathSync,
17
- rmSync,
18
- writeFileSync,
19
- } from "node:fs";
20
- import { tmpdir } from "node:os";
21
- import { dirname, join } from "node:path";
22
- import { fileURLToPath } from "node:url";
23
- import { afterAll, test } from "vitest";
24
-
25
- const HERE = dirname(fileURLToPath(import.meta.url));
26
- const tmp = realpathSync(mkdtempSync(join(tmpdir(), "ledger-test-")));
27
- const paper = join(tmp, "a-paper");
28
- const consumer = join(tmp, "consumer");
29
- const gate = "cold-read-diff"; // a real skill, so skillHash resolves
30
- mkdirSync(paper, { recursive: true });
31
- mkdirSync(join(consumer, ".claude", "skills"), { recursive: true });
32
- cpSync(
33
- join(HERE, "..", "..", gate),
34
- join(consumer, ".claude", "skills", gate),
35
- {
36
- recursive: true,
37
- verbatimSymlinks: true,
38
- },
39
- );
40
- process.env.PIPELINE_LEDGER = join(tmp, "runs.jsonl");
41
- process.env.CLAUDE_PROJECT_DIR = consumer;
42
- const { record, status } = await import("./ledger.mjs");
43
- afterAll(() => rmSync(tmp, { recursive: true, force: true }));
44
-
45
- const check = (name, actual, expected) => assert.equal(actual, expected, name);
46
- const mk = (t) => writeFileSync(join(paper, "paper.md"), t);
47
- const st = () => status(paper, { gates: [gate] })[0];
48
-
49
- test("the ledger catches every planted error, in order", () => {
50
- // ── 1. NEVER-RUN is a state, not an absence ──────────────────────────────────────────────
51
- mk("version one");
52
- check("a gate nobody has run reads NEVER-RUN", st().state, "NEVER-RUN");
53
-
54
- // ── 2. a fresh run is fresh ──────────────────────────────────────────────────────────────
55
- // The clean run is an ABSTENTION, not a pass: there is no constructor asserting that nothing
56
- // was wrong (see ledger.mjs). `no-witness` says the check ran and produced no finding.
57
- const ran = () =>
58
- record({ skill: gate, paper, kind: "ABSTAINED", reason: "no-witness" });
59
- ran();
60
- check("a run against the current bytes reads FRESH", st().state, "FRESH");
61
-
62
- // ── 3. 🔴 THE PLANTED ERROR THIS FILE EXISTS FOR: the paper changes underneath a green gate.
63
- // This is the exact defect that shipped — a ☑ describing a document that no longer
64
- // exists. If this assertion ever goes green-on-stale, the ledger is decorative.
65
- mk("version two, rewritten after the gate ran");
66
- check(
67
- "after the paper changes, the same verdict reads STALE-PAPER",
68
- st().state,
69
- "STALE-PAPER",
70
- );
71
-
72
- // ── 4. and the property `make` does not have: the CHECKER changed ────────────────────────
73
- mk("version one"); // put the paper back so only the skill differs
74
- ran();
75
- check("back on the original bytes it is FRESH again", st().state, "FRESH");
76
-
77
- // The SKILL.md whose bytes `skillHash(gate)` folds into the key is the CONSUMER's, resolved from
78
- // CLAUDE_PROJECT_DIR — here a temp copy, so the edit below never touches a tracked file. (The
79
- // selftest this replaced appended to the real skills/cold-read-diff/SKILL.md and restored it,
80
- // i.e. it edited the working tree in place while other tests could be reading it.)
81
- const skillFile = join(consumer, ".claude", "skills", gate, "SKILL.md");
82
- const skillBefore = readFileSync(skillFile);
83
- try {
84
- appendFileSync(
85
- skillFile,
86
- "\n<!-- selftest: transient edit, removed below -->\n",
87
- );
88
- check(
89
- "editing the SKILL itself makes its old verdict STALE-SKILL",
90
- st().state,
91
- "STALE-SKILL",
92
- );
93
- } finally {
94
- writeFileSync(skillFile, skillBefore); // never leave a real skill modified
95
- }
96
- check("restoring the skill restores FRESH", st().state, "FRESH");
97
-
98
- // ── 5. the mute-check signal, both ways ──────────────────────────────────────────────────
99
- check(
100
- "a check that has only ever abstained is flagged as never having found anything",
101
- st().everFound,
102
- false,
103
- );
104
- writeFileSync(join(paper, "report.md"), "---\nfindings: 3\n---\n");
105
- record({
106
- skill: gate,
107
- paper,
108
- kind: "FINDING",
109
- findings: 3,
110
- report: "report.md",
111
- });
112
- check("one finding clears the flag", st().everFound, true);
113
-
114
- // ── 6. a retired verdict is refused rather than silently stored ──────────────────────────
115
- // 🔴 THE POINT OF THE WHOLE REFACTOR, asserted at its narrowest: `PASS` cannot be written.
116
- // Not "is discouraged" — the constructor does not exist, and reaching for it is an error that
117
- // names what to do instead.
118
- let msg = "";
119
- try {
120
- record({ skill: gate, paper, kind: "PASS" });
121
- } catch (e) {
122
- msg = e.message;
123
- }
124
- check("recording PASS throws", msg.includes("not a verdict any more"), true);
125
- check(
126
- "...and the error says what to record instead",
127
- msg.includes("no-witness"),
128
- true,
129
- );
130
-
131
- let threw = false;
132
- try {
133
- record({ skill: gate, paper, kind: "probably fine" });
134
- } catch {
135
- threw = true;
136
- }
137
- check("an unrecognised kind throws instead of being written", threw, true);
138
-
139
- threw = false;
140
- try {
141
- record({ skill: gate, paper, kind: "ABSTAINED", reason: "it seemed fine" });
142
- } catch {
143
- threw = true;
144
- }
145
- check("an abstention with a free-text reason throws", threw, true);
146
-
147
- // ── 7. ONE CHECK, ONE ROW: two checks under one skill do not overwrite each other ────────
148
- // The defect: `status()` takes the last row per key, and the key used to be the skill. A clean
149
- // run of the second check erased a finding of the first from every derived view.
150
- writeFileSync(join(paper, "prov.md"), "---\nfindings: 5\n---\n");
151
- record({
152
- skill: "build-benchmark",
153
- check: "check-provenance",
154
- paper,
155
- kind: "FINDING",
156
- findings: 5,
157
- report: "prov.md",
158
- });
159
- record({
160
- skill: "build-benchmark",
161
- check: "arm-permutation",
162
- paper,
163
- kind: "ABSTAINED",
164
- reason: "no-witness",
165
- });
166
- const both = status(paper, {
167
- gates: [
168
- "build-benchmark/check-provenance",
169
- "build-benchmark/arm-permutation",
170
- ],
171
- });
172
- check(
173
- "the finding survives a clean run of a SIBLING check",
174
- both[0].findings,
175
- 5,
176
- );
177
- check("and the sibling keeps its own row", both[1].findings, 0);
178
- check("the sibling did not inherit the finding", both[1].everFound, false);
179
-
180
- // ── 8. ORDER IN THE FILE IS NOT ORDER IN TIME ────────────────────────────────────────────
181
- // The defect (external review, P1, 2026-09-15): `status()` took `runs[runs.length - 1]`, so the
182
- // verdict was decided by POSITION. The consumer declares `merge=union` for this ledger, and
183
- // union concatenates "ours, then theirs" without ordering anything — so a merge that lands an
184
- // older row after a newer one hid the finding and reported a clean state.
185
- //
186
- // The fixture reproduces exactly that shape: both rows are REAL (written by `record`), only
187
- // their order in the file is swapped, which is all a union merge does. The older row's stamp is
188
- // set explicitly rather than slept for, so the test is deterministic and costs no wall clock.
189
- const LEDGER_FILE = process.env.PIPELINE_LEDGER;
190
- writeFileSync(join(paper, "merge.md"), "---\nfindings: 3\n---\n");
191
- record({
192
- skill: gate,
193
- check: "merge-order",
194
- paper,
195
- kind: "ABSTAINED",
196
- reason: "no-witness",
197
- });
198
- record({
199
- skill: gate,
200
- check: "merge-order",
201
- paper,
202
- kind: "FINDING",
203
- findings: 3,
204
- report: "merge.md",
205
- });
206
-
207
- {
208
- const all = readFileSync(LEDGER_FILE, "utf8").split("\n").filter(Boolean);
209
- const [abstained, finding] = all.slice(-2).map((l) => JSON.parse(l));
210
- abstained.ts = "2026-01-01T00:00:00.000Z"; // deliberately older, with no dependence on a timer
211
- writeFileSync(
212
- LEDGER_FILE,
213
- [
214
- ...all.slice(0, -2),
215
- JSON.stringify(finding),
216
- JSON.stringify(abstained),
217
- ].join("\n") + "\n",
218
- );
219
- }
220
-
221
- const merged = status(paper, { gates: [`${gate}/merge-order`] })[0];
222
- check(
223
- "an older row sitting AFTER a newer one does not hide the finding",
224
- merged.findings,
225
- 3,
226
- );
227
- check(
228
- "...and the verdict does not come from the stale abstention",
229
- merged.abstained,
230
- null,
231
- );
232
-
233
- // The other half: EQUAL stamps must keep the old behaviour — file order decides. Two runs inside
234
- // one second carry no other information, and for a single writer file order is the true order.
235
- {
236
- const all = readFileSync(LEDGER_FILE, "utf8").split("\n").filter(Boolean);
237
- const [finding, abstained] = all.slice(-2).map((l) => JSON.parse(l));
238
- const sameTs = finding.ts;
239
- writeFileSync(
240
- LEDGER_FILE,
241
- [
242
- ...all.slice(0, -2),
243
- JSON.stringify({ ...finding, ts: sameTs }),
244
- JSON.stringify({ ...abstained, ts: sameTs }),
245
- ].join("\n") + "\n",
246
- );
247
- const tie = status(paper, { gates: [`${gate}/merge-order`] })[0];
248
- check(
249
- "with equal stamps the later row in the file still wins",
250
- tie.findings,
251
- 0,
252
- );
253
- }
254
- });